Warning: Permanently added '54.210.179.126' (ED25519) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 3146394 --chroot fedora-rawhide-aarch64 --detached Version: 0.55.1 Task: {'appstream': True, 'background': False, 'build_id': 3146394, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'cd33a69a542dbf2cbe094ec44b78c0dda213c66a', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/mmuzila/minizip-testing/libsbml.git', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'libsbml', 'package_version': '5.19.0-9.fc36', 'project_dirname': 'minizip-testing', 'project_name': 'minizip-testing', 'project_owner': 'mmuzila', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/mmuzila/minizip-testing/fedora-rawhide-aarch64/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'mmuzila/minizip-testing--mmuzila', 'source_json': {}, 'source_type': None, 'submitter': 'mmuzila', 'task_id': '3146394-fedora-rawhide-aarch64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/mmuzila/minizip-testing/libsbml.git /var/lib/copr-rpmbuild/workspace/workdir-bpk5atgn/libsbml --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/mmuzila/minizip-testing/libsbml.git', '/var/lib/copr-rpmbuild/workspace/workdir-bpk5atgn/libsbml', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-bpk5atgn/libsbml'... Running: git checkout cd33a69a542dbf2cbe094ec44b78c0dda213c66a cmd: ['git', 'checkout', 'cd33a69a542dbf2cbe094ec44b78c0dda213c66a'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-bpk5atgn/libsbml rc: 0 stdout: stderr: Note: switching to 'cd33a69a542dbf2cbe094ec44b78c0dda213c66a'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at cd33a69 automatic import of libsbml Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-bpk5atgn/libsbml rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading libSBML-5.19.0-core-plus-packages-src.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated INFO: Calling: curl -H Pragma: -o libSBML-5.19.0-core-plus-packages-src.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mmuzila/minizip-testing/libsbml/libSBML-5.19.0-core-plus-packages-src.tar.gz/md5/f6fdfff78e2408b31dce564647b78b1c/libSBML-5.19.0-core-plus-packages-src.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 15.5M 100 15.5M 0 0 74.2M 0 --:--:-- --:--:-- --:--:-- 74.2M INFO: Reading stdout from command: md5sum libSBML-5.19.0-core-plus-packages-src.tar.gz INFO: Downloading libSBML-5.19.0-render-src.zip INFO: Calling: curl -H Pragma: -o libSBML-5.19.0-render-src.zip --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mmuzila/minizip-testing/libsbml/libSBML-5.19.0-render-src.zip/md5/4e41fa55d280a59adf9c72c85562ea07/libSBML-5.19.0-render-src.zip % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 812k 100 812k 0 0 17.6M 0 --:--:-- --:--:-- --:--:-- 17.6M INFO: Reading stdout from command: md5sum libSBML-5.19.0-render-src.zip Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-bpk5atgn/libsbml/libsbml.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-bpk5atgn/libsbml --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1641986745.557547 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.15 starting (python version = 3.9.7, NVR = mock-2.15-1.fc34)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-bpk5atgn/libsbml/libsbml.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1641986745.557547/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.15 INFO: Mock Version: 2.15 Start(bootstrap): dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 416 kB/s | 35 kB 00:00 fedora 17 MB/s | 59 MB 00:03 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: dnf noarch 4.10.0-1.fc36 fedora 448 k dnf-plugins-core noarch 4.0.24-1.fc36 fedora 35 k Installing dependencies: alternatives aarch64 1.19-1.fc35 fedora 35 k audit-libs aarch64 3.0.6-2.fc36 fedora 115 k basesystem noarch 11-12.fc35 fedora 7.0 k bash aarch64 5.1.8-3.fc36 fedora 1.6 M bzip2-libs aarch64 1.0.8-10.fc36 fedora 42 k ca-certificates noarch 2021.2.52-2.fc36 fedora 365 k coreutils aarch64 9.0-2.fc36 fedora 1.0 M coreutils-common aarch64 9.0-2.fc36 fedora 2.0 M crypto-policies noarch 20211115-1.git1b1c04c.fc36 fedora 58 k curl aarch64 7.81.0-1.fc36 fedora 306 k cyrus-sasl-lib aarch64 2.1.27-16.fc36 fedora 769 k dbus-libs aarch64 1:1.13.20-2.fc36 fedora 155 k dnf-data noarch 4.10.0-1.fc36 fedora 45 k elfutils-default-yama-scope noarch 0.186-1.fc36 fedora 19 k elfutils-libelf aarch64 0.186-1.fc36 fedora 201 k elfutils-libs aarch64 0.186-1.fc36 fedora 257 k expat aarch64 2.4.1-2.fc35 fedora 105 k fedora-gpg-keys noarch 36-0.3 fedora 113 k fedora-release noarch 36-0.12 fedora 12 k fedora-release-common noarch 36-0.12 fedora 21 k fedora-release-identity-basic noarch 36-0.12 fedora 12 k fedora-repos noarch 36-0.3 fedora 11 k fedora-repos-rawhide noarch 36-0.3 fedora 10 k file-libs aarch64 5.41-3.fc36 fedora 634 k filesystem aarch64 3.16-1.fc36 fedora 1.1 M gawk aarch64 5.1.1-1.fc36 fedora 1.0 M gdbm-libs aarch64 1:1.22-1.fc36 fedora 58 k glib2 aarch64 2.71.0-1.fc36 fedora 2.6 M glibc aarch64 2.34.9000-36.fc36 fedora 1.8 M glibc-common aarch64 2.34.9000-36.fc36 fedora 411 k glibc-minimal-langpack aarch64 2.34.9000-36.fc36 fedora 147 k gmp aarch64 1:6.2.1-1.fc36 fedora 266 k gnupg2 aarch64 2.3.4-1.fc36 fedora 2.5 M gnutls aarch64 3.7.2-2.fc35 fedora 1.0 M gpgme aarch64 1.15.1-6.fc36 fedora 201 k grep aarch64 3.7-1.fc36 fedora 292 k ima-evm-utils aarch64 1.3.2-4.fc36 fedora 61 k json-c aarch64 0.15-2.fc35 fedora 43 k keyutils-libs aarch64 1.6.1-3.fc35 fedora 31 k krb5-libs aarch64 1.19.2-4.fc36 fedora 732 k libacl aarch64 2.3.1-2.fc35 fedora 24 k libarchive aarch64 3.5.2-4.fc36 fedora 387 k libassuan aarch64 2.5.5-3.fc35 fedora 66 k libattr aarch64 2.5.1-3.fc35 fedora 18 k libblkid aarch64 2.37.2-1.fc36 fedora 108 k libbrotli aarch64 1.0.9-6.fc35 fedora 313 k libcap aarch64 2.48-3.fc35 fedora 66 k libcap-ng aarch64 0.8.2-8.fc36 fedora 32 k libcom_err aarch64 1.46.5-1.fc36 fedora 25 k libcomps aarch64 0.1.18-1.fc36 fedora 76 k libcurl aarch64 7.81.0-1.fc36 fedora 291 k libdnf aarch64 0.65.0-1.fc36 fedora 601 k libffi aarch64 3.4.2-6.fc36 fedora 35 k libfsverity aarch64 1.4-6.fc36 fedora 19 k libgcc aarch64 11.2.1-7.fc36 fedora 106 k libgcrypt aarch64 1.9.4-1.fc36 fedora 450 k libgomp aarch64 11.2.1-7.fc36 fedora 283 k libgpg-error aarch64 1.43-1.fc36 fedora 214 k libidn2 aarch64 2.3.2-3.fc36 fedora 104 k libksba aarch64 1.6.0-2.fc35 fedora 154 k libmodulemd aarch64 2.13.0-3.fc36 fedora 207 k libmount aarch64 2.37.2-1.fc36 fedora 133 k libnghttp2 aarch64 1.46.0-1.fc36 fedora 69 k libnsl2 aarch64 2.0.0-2.fc36 fedora 30 k libpsl aarch64 0.21.1-4.fc35 fedora 63 k librepo aarch64 1.14.2-1.fc36 fedora 92 k libreport-filesystem noarch 2.15.2-6.fc35 fedora 15 k libselinux aarch64 3.3-2.fc36 fedora 84 k libsemanage aarch64 3.3-1.fc36 fedora 113 k libsepol aarch64 3.3-2.fc36 fedora 295 k libsigsegv aarch64 2.14-1.fc36 fedora 27 k libsmartcols aarch64 2.37.2-1.fc36 fedora 63 k libsolv aarch64 0.7.20-1.fc36 fedora 385 k libssh aarch64 0.9.6-2.fc36 fedora 203 k libssh-config noarch 0.9.6-2.fc36 fedora 7.4 k libstdc++ aarch64 11.2.1-7.fc36 fedora 711 k libtasn1 aarch64 4.18.0-1.fc36 fedora 74 k libtirpc aarch64 1.3.2-1.rc1.fc36 fedora 94 k libunistring aarch64 0.9.10-14.fc35 fedora 488 k libuuid aarch64 2.37.2-1.fc36 fedora 28 k libverto aarch64 0.3.2-2.fc35 fedora 21 k libxcrypt aarch64 4.4.27-1.fc36 fedora 123 k libxml2 aarch64 2.9.12-6.fc35 fedora 726 k libyaml aarch64 0.2.5-6.fc35 fedora 59 k libzstd aarch64 1.5.1-6.fc36 fedora 308 k lua-libs aarch64 5.4.3-2.fc35 fedora 212 k lz4-libs aarch64 1.9.3-3.fc35 fedora 67 k mpdecimal aarch64 2.5.1-2.fc35 fedora 101 k mpfr aarch64 4.1.0-8.fc35 fedora 239 k ncurses-base noarch 6.2-8.20210508.fc35 fedora 61 k ncurses-libs aarch64 6.2-8.20210508.fc35 fedora 314 k nettle aarch64 3.7.3-2.fc35 fedora 404 k npth aarch64 1.6-7.fc35 fedora 24 k openldap aarch64 2.4.59-4.fc36 fedora 254 k openssl-libs aarch64 1:3.0.0-1.fc36 fedora 2.0 M p11-kit aarch64 0.23.22-5.fc36 fedora 339 k p11-kit-trust aarch64 0.23.22-5.fc36 fedora 135 k pcre aarch64 8.45-1.fc36 fedora 180 k pcre2 aarch64 10.39-1.fc36 fedora 213 k pcre2-syntax noarch 10.39-1.fc36 fedora 144 k popt aarch64 1.18-6.fc36 fedora 58 k publicsuffix-list-dafsa noarch 20210518-3.fc36 fedora 58 k python-pip-wheel noarch 21.3.1-1.fc36 fedora 1.1 M python-setuptools-wheel noarch 59.6.0-1.fc36 fedora 507 k python3 aarch64 3.10.1-2.fc36 fedora 26 k python3-dateutil noarch 1:2.8.1-7.fc35 fedora 289 k python3-dbus aarch64 1.2.18-2.fc35 fedora 132 k python3-distro noarch 1.6.0-1.fc35 fedora 38 k python3-dnf noarch 4.10.0-1.fc36 fedora 417 k python3-dnf-plugins-core noarch 4.0.24-1.fc36 fedora 211 k python3-gpg aarch64 1.15.1-6.fc36 fedora 257 k python3-hawkey aarch64 0.65.0-1.fc36 fedora 104 k python3-libcomps aarch64 0.1.18-1.fc36 fedora 48 k python3-libdnf aarch64 0.65.0-1.fc36 fedora 733 k python3-libs aarch64 3.10.1-2.fc36 fedora 7.5 M python3-rpm aarch64 4.17.0-1.fc36.1 fedora 94 k python3-six noarch 1.16.0-4.fc35 fedora 36 k readline aarch64 8.1-3.fc35 fedora 211 k rpm aarch64 4.17.0-1.fc36.1 fedora 536 k rpm-build-libs aarch64 4.17.0-1.fc36.1 fedora 91 k rpm-libs aarch64 4.17.0-1.fc36.1 fedora 309 k rpm-sign-libs aarch64 4.17.0-1.fc36.1 fedora 27 k sed aarch64 4.8-8.fc35 fedora 294 k setup noarch 2.13.9.1-2.fc35 fedora 143 k shadow-utils aarch64 2:4.9-8.fc36 fedora 1.1 M sqlite-libs aarch64 3.36.0-4.fc36 fedora 633 k systemd-libs aarch64 250.2-1.fc36 fedora 599 k tpm2-tss aarch64 3.1.0-4.fc36 fedora 540 k tzdata noarch 2021e-1.fc36 fedora 431 k xz-libs aarch64 5.2.5-7.fc35 fedora 90 k zchunk-libs aarch64 1.1.15-3.fc36 fedora 46 k zlib aarch64 1.2.11-30.fc35 fedora 90 k Transaction Summary ================================================================================ Install 134 Packages Total download size: 49 M Installed size: 185 M Downloading Packages: (1/134): alternatives-1.19-1.fc35.aarch64.rpm 781 kB/s | 35 kB 00:00 (2/134): basesystem-11-12.fc35.noarch.rpm 153 kB/s | 7.0 kB 00:00 (3/134): audit-libs-3.0.6-2.fc36.aarch64.rpm 2.4 MB/s | 115 kB 00:00 (4/134): bzip2-libs-1.0.8-10.fc36.aarch64.rpm 6.8 MB/s | 42 kB 00:00 (5/134): bash-5.1.8-3.fc36.aarch64.rpm 90 MB/s | 1.6 MB 00:00 (6/134): ca-certificates-2021.2.52-2.fc36.noarc 22 MB/s | 365 kB 00:00 (7/134): coreutils-9.0-2.fc36.aarch64.rpm 75 MB/s | 1.0 MB 00:00 (8/134): crypto-policies-20211115-1.git1b1c04c. 12 MB/s | 58 kB 00:00 (9/134): curl-7.81.0-1.fc36.aarch64.rpm 62 MB/s | 306 kB 00:00 (10/134): dbus-libs-1.13.20-2.fc36.aarch64.rpm 34 MB/s | 155 kB 00:00 (11/134): dnf-4.10.0-1.fc36.noarch.rpm 44 MB/s | 448 kB 00:00 (12/134): dnf-data-4.10.0-1.fc36.noarch.rpm 3.4 MB/s | 45 kB 00:00 (13/134): cyrus-sasl-lib-2.1.27-16.fc36.aarch64 20 MB/s | 769 kB 00:00 (14/134): coreutils-common-9.0-2.fc36.aarch64.r 36 MB/s | 2.0 MB 00:00 (15/134): dnf-plugins-core-4.0.24-1.fc36.noarch 2.3 MB/s | 35 kB 00:00 (16/134): elfutils-default-yama-scope-0.186-1.f 2.5 MB/s | 19 kB 00:00 (17/134): elfutils-libelf-0.186-1.fc36.aarch64. 40 MB/s | 201 kB 00:00 (18/134): expat-2.4.1-2.fc35.aarch64.rpm 20 MB/s | 105 kB 00:00 (19/134): elfutils-libs-0.186-1.fc36.aarch64.rp 34 MB/s | 257 kB 00:00 (20/134): fedora-gpg-keys-36-0.3.noarch.rpm 40 MB/s | 113 kB 00:00 (21/134): fedora-release-36-0.12.noarch.rpm 3.0 MB/s | 12 kB 00:00 (22/134): fedora-release-common-36-0.12.noarch. 6.0 MB/s | 21 kB 00:00 (23/134): fedora-release-identity-basic-36-0.12 4.4 MB/s | 12 kB 00:00 (24/134): fedora-repos-36-0.3.noarch.rpm 3.9 MB/s | 11 kB 00:00 (25/134): fedora-repos-rawhide-36-0.3.noarch.rp 4.0 MB/s | 10 kB 00:00 (26/134): file-libs-5.41-3.fc36.aarch64.rpm 47 MB/s | 634 kB 00:00 (27/134): filesystem-3.16-1.fc36.aarch64.rpm 74 MB/s | 1.1 MB 00:00 (28/134): gdbm-libs-1.22-1.fc36.aarch64.rpm 20 MB/s | 58 kB 00:00 (29/134): glib2-2.71.0-1.fc36.aarch64.rpm 84 MB/s | 2.6 MB 00:00 (30/134): glibc-2.34.9000-36.fc36.aarch64.rpm 58 MB/s | 1.8 MB 00:00 (31/134): gawk-5.1.1-1.fc36.aarch64.rpm 18 MB/s | 1.0 MB 00:00 (32/134): glibc-common-2.34.9000-36.fc36.aarch6 36 MB/s | 411 kB 00:00 (33/134): glibc-minimal-langpack-2.34.9000-36.f 26 MB/s | 147 kB 00:00 (34/134): gmp-6.2.1-1.fc36.aarch64.rpm 29 MB/s | 266 kB 00:00 (35/134): gnupg2-2.3.4-1.fc36.aarch64.rpm 101 MB/s | 2.5 MB 00:00 (36/134): gpgme-1.15.1-6.fc36.aarch64.rpm 12 MB/s | 201 kB 00:00 (37/134): gnutls-3.7.2-2.fc35.aarch64.rpm 30 MB/s | 1.0 MB 00:00 (38/134): grep-3.7-1.fc36.aarch64.rpm 29 MB/s | 292 kB 00:00 (39/134): ima-evm-utils-1.3.2-4.fc36.aarch64.rp 10 MB/s | 61 kB 00:00 (40/134): json-c-0.15-2.fc35.aarch64.rpm 16 MB/s | 43 kB 00:00 (41/134): keyutils-libs-1.6.1-3.fc35.aarch64.rp 11 MB/s | 31 kB 00:00 (42/134): krb5-libs-1.19.2-4.fc36.aarch64.rpm 85 MB/s | 732 kB 00:00 (43/134): libacl-2.3.1-2.fc35.aarch64.rpm 4.7 MB/s | 24 kB 00:00 (44/134): libarchive-3.5.2-4.fc36.aarch64.rpm 67 MB/s | 387 kB 00:00 (45/134): libassuan-2.5.5-3.fc35.aarch64.rpm 20 MB/s | 66 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Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.16-1.fc36.aarch64 1/1 Preparing : 1/1 Installing : libgcc-11.2.1-7.fc36.aarch64 1/134 Running scriptlet: libgcc-11.2.1-7.fc36.aarch64 1/134 Installing : crypto-policies-20211115-1.git1b1c04c.fc36.noarc 2/134 Running scriptlet: crypto-policies-20211115-1.git1b1c04c.fc36.noarc 2/134 Installing : tzdata-2021e-1.fc36.noarch 3/134 Installing : fedora-release-identity-basic-36-0.12.noarch 4/134 Installing : python-setuptools-wheel-59.6.0-1.fc36.noarch 5/134 Installing : publicsuffix-list-dafsa-20210518-3.fc36.noarch 6/134 Installing : pcre2-syntax-10.39-1.fc36.noarch 7/134 Installing : ncurses-base-6.2-8.20210508.fc35.noarch 8/134 Installing : libssh-config-0.9.6-2.fc36.noarch 9/134 Installing : libreport-filesystem-2.15.2-6.fc35.noarch 10/134 Installing : dnf-data-4.10.0-1.fc36.noarch 11/134 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : fedora-gpg-keys-36-0.3.noarch 12/134 Installing : 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elfutils-default-yama-scope-0.186-1.fc36.noarch 16/134 Verifying : elfutils-libelf-0.186-1.fc36.aarch64 17/134 Verifying : elfutils-libs-0.186-1.fc36.aarch64 18/134 Verifying : expat-2.4.1-2.fc35.aarch64 19/134 Verifying : fedora-gpg-keys-36-0.3.noarch 20/134 Verifying : fedora-release-36-0.12.noarch 21/134 Verifying : fedora-release-common-36-0.12.noarch 22/134 Verifying : fedora-release-identity-basic-36-0.12.noarch 23/134 Verifying : fedora-repos-36-0.3.noarch 24/134 Verifying : fedora-repos-rawhide-36-0.3.noarch 25/134 Verifying : file-libs-5.41-3.fc36.aarch64 26/134 Verifying : filesystem-3.16-1.fc36.aarch64 27/134 Verifying : gawk-5.1.1-1.fc36.aarch64 28/134 Verifying : gdbm-libs-1:1.22-1.fc36.aarch64 29/134 Verifying : glib2-2.71.0-1.fc36.aarch64 30/134 Verifying : glibc-2.34.9000-36.fc36.aarch64 31/134 Verifying : glibc-common-2.34.9000-36.fc36.aarch64 32/134 Verifying : glibc-minimal-langpack-2.34.9000-36.fc36.aarch64 33/134 Verifying : gmp-1:6.2.1-1.fc36.aarch64 34/134 Verifying : gnupg2-2.3.4-1.fc36.aarch64 35/134 Verifying : gnutls-3.7.2-2.fc35.aarch64 36/134 Verifying : gpgme-1.15.1-6.fc36.aarch64 37/134 Verifying : grep-3.7-1.fc36.aarch64 38/134 Verifying : ima-evm-utils-1.3.2-4.fc36.aarch64 39/134 Verifying : json-c-0.15-2.fc35.aarch64 40/134 Verifying : keyutils-libs-1.6.1-3.fc35.aarch64 41/134 Verifying : krb5-libs-1.19.2-4.fc36.aarch64 42/134 Verifying : libacl-2.3.1-2.fc35.aarch64 43/134 Verifying : libarchive-3.5.2-4.fc36.aarch64 44/134 Verifying : libassuan-2.5.5-3.fc35.aarch64 45/134 Verifying : libattr-2.5.1-3.fc35.aarch64 46/134 Verifying : libblkid-2.37.2-1.fc36.aarch64 47/134 Verifying : libbrotli-1.0.9-6.fc35.aarch64 48/134 Verifying : libcap-2.48-3.fc35.aarch64 49/134 Verifying : libcap-ng-0.8.2-8.fc36.aarch64 50/134 Verifying : libcom_err-1.46.5-1.fc36.aarch64 51/134 Verifying : libcomps-0.1.18-1.fc36.aarch64 52/134 Verifying : libcurl-7.81.0-1.fc36.aarch64 53/134 Verifying : libdnf-0.65.0-1.fc36.aarch64 54/134 Verifying : libffi-3.4.2-6.fc36.aarch64 55/134 Verifying : libfsverity-1.4-6.fc36.aarch64 56/134 Verifying : libgcc-11.2.1-7.fc36.aarch64 57/134 Verifying : libgcrypt-1.9.4-1.fc36.aarch64 58/134 Verifying : libgomp-11.2.1-7.fc36.aarch64 59/134 Verifying : libgpg-error-1.43-1.fc36.aarch64 60/134 Verifying : libidn2-2.3.2-3.fc36.aarch64 61/134 Verifying : libksba-1.6.0-2.fc35.aarch64 62/134 Verifying : libmodulemd-2.13.0-3.fc36.aarch64 63/134 Verifying : libmount-2.37.2-1.fc36.aarch64 64/134 Verifying : libnghttp2-1.46.0-1.fc36.aarch64 65/134 Verifying : libnsl2-2.0.0-2.fc36.aarch64 66/134 Verifying : libpsl-0.21.1-4.fc35.aarch64 67/134 Verifying : librepo-1.14.2-1.fc36.aarch64 68/134 Verifying : libreport-filesystem-2.15.2-6.fc35.noarch 69/134 Verifying : libselinux-3.3-2.fc36.aarch64 70/134 Verifying : libsemanage-3.3-1.fc36.aarch64 71/134 Verifying : libsepol-3.3-2.fc36.aarch64 72/134 Verifying : libsigsegv-2.14-1.fc36.aarch64 73/134 Verifying : libsmartcols-2.37.2-1.fc36.aarch64 74/134 Verifying : libsolv-0.7.20-1.fc36.aarch64 75/134 Verifying : libssh-0.9.6-2.fc36.aarch64 76/134 Verifying : libssh-config-0.9.6-2.fc36.noarch 77/134 Verifying : libstdc++-11.2.1-7.fc36.aarch64 78/134 Verifying : libtasn1-4.18.0-1.fc36.aarch64 79/134 Verifying : libtirpc-1.3.2-1.rc1.fc36.aarch64 80/134 Verifying : libunistring-0.9.10-14.fc35.aarch64 81/134 Verifying : libuuid-2.37.2-1.fc36.aarch64 82/134 Verifying : libverto-0.3.2-2.fc35.aarch64 83/134 Verifying : libxcrypt-4.4.27-1.fc36.aarch64 84/134 Verifying : libxml2-2.9.12-6.fc35.aarch64 85/134 Verifying : libyaml-0.2.5-6.fc35.aarch64 86/134 Verifying : libzstd-1.5.1-6.fc36.aarch64 87/134 Verifying : lua-libs-5.4.3-2.fc35.aarch64 88/134 Verifying : lz4-libs-1.9.3-3.fc35.aarch64 89/134 Verifying : mpdecimal-2.5.1-2.fc35.aarch64 90/134 Verifying : mpfr-4.1.0-8.fc35.aarch64 91/134 Verifying : ncurses-base-6.2-8.20210508.fc35.noarch 92/134 Verifying : ncurses-libs-6.2-8.20210508.fc35.aarch64 93/134 Verifying : nettle-3.7.3-2.fc35.aarch64 94/134 Verifying : npth-1.6-7.fc35.aarch64 95/134 Verifying : openldap-2.4.59-4.fc36.aarch64 96/134 Verifying : openssl-libs-1:3.0.0-1.fc36.aarch64 97/134 Verifying : p11-kit-0.23.22-5.fc36.aarch64 98/134 Verifying : p11-kit-trust-0.23.22-5.fc36.aarch64 99/134 Verifying : pcre-8.45-1.fc36.aarch64 100/134 Verifying : pcre2-10.39-1.fc36.aarch64 101/134 Verifying : pcre2-syntax-10.39-1.fc36.noarch 102/134 Verifying : popt-1.18-6.fc36.aarch64 103/134 Verifying : publicsuffix-list-dafsa-20210518-3.fc36.noarch 104/134 Verifying : python-pip-wheel-21.3.1-1.fc36.noarch 105/134 Verifying : python-setuptools-wheel-59.6.0-1.fc36.noarch 106/134 Verifying : python3-3.10.1-2.fc36.aarch64 107/134 Verifying : python3-dateutil-1:2.8.1-7.fc35.noarch 108/134 Verifying : python3-dbus-1.2.18-2.fc35.aarch64 109/134 Verifying : python3-distro-1.6.0-1.fc35.noarch 110/134 Verifying : python3-dnf-4.10.0-1.fc36.noarch 111/134 Verifying : python3-dnf-plugins-core-4.0.24-1.fc36.noarch 112/134 Verifying : python3-gpg-1.15.1-6.fc36.aarch64 113/134 Verifying : python3-hawkey-0.65.0-1.fc36.aarch64 114/134 Verifying : python3-libcomps-0.1.18-1.fc36.aarch64 115/134 Verifying : python3-libdnf-0.65.0-1.fc36.aarch64 116/134 Verifying : python3-libs-3.10.1-2.fc36.aarch64 117/134 Verifying : python3-rpm-4.17.0-1.fc36.1.aarch64 118/134 Verifying : python3-six-1.16.0-4.fc35.noarch 119/134 Verifying : readline-8.1-3.fc35.aarch64 120/134 Verifying : rpm-4.17.0-1.fc36.1.aarch64 121/134 Verifying : rpm-build-libs-4.17.0-1.fc36.1.aarch64 122/134 Verifying : rpm-libs-4.17.0-1.fc36.1.aarch64 123/134 Verifying : rpm-sign-libs-4.17.0-1.fc36.1.aarch64 124/134 Verifying : sed-4.8-8.fc35.aarch64 125/134 Verifying : setup-2.13.9.1-2.fc35.noarch 126/134 Verifying : shadow-utils-2:4.9-8.fc36.aarch64 127/134 Verifying : sqlite-libs-3.36.0-4.fc36.aarch64 128/134 Verifying : systemd-libs-250.2-1.fc36.aarch64 129/134 Verifying : tpm2-tss-3.1.0-4.fc36.aarch64 130/134 Verifying : tzdata-2021e-1.fc36.noarch 131/134 Verifying : xz-libs-5.2.5-7.fc35.aarch64 132/134 Verifying : zchunk-libs-1.1.15-3.fc36.aarch64 133/134 Verifying : zlib-1.2.11-30.fc35.aarch64 134/134 Installed: alternatives-1.19-1.fc35.aarch64 audit-libs-3.0.6-2.fc36.aarch64 basesystem-11-12.fc35.noarch bash-5.1.8-3.fc36.aarch64 bzip2-libs-1.0.8-10.fc36.aarch64 ca-certificates-2021.2.52-2.fc36.noarch coreutils-9.0-2.fc36.aarch64 coreutils-common-9.0-2.fc36.aarch64 crypto-policies-20211115-1.git1b1c04c.fc36.noarch curl-7.81.0-1.fc36.aarch64 cyrus-sasl-lib-2.1.27-16.fc36.aarch64 dbus-libs-1:1.13.20-2.fc36.aarch64 dnf-4.10.0-1.fc36.noarch dnf-data-4.10.0-1.fc36.noarch dnf-plugins-core-4.0.24-1.fc36.noarch elfutils-default-yama-scope-0.186-1.fc36.noarch elfutils-libelf-0.186-1.fc36.aarch64 elfutils-libs-0.186-1.fc36.aarch64 expat-2.4.1-2.fc35.aarch64 fedora-gpg-keys-36-0.3.noarch fedora-release-36-0.12.noarch fedora-release-common-36-0.12.noarch fedora-release-identity-basic-36-0.12.noarch fedora-repos-36-0.3.noarch fedora-repos-rawhide-36-0.3.noarch file-libs-5.41-3.fc36.aarch64 filesystem-3.16-1.fc36.aarch64 gawk-5.1.1-1.fc36.aarch64 gdbm-libs-1:1.22-1.fc36.aarch64 glib2-2.71.0-1.fc36.aarch64 glibc-2.34.9000-36.fc36.aarch64 glibc-common-2.34.9000-36.fc36.aarch64 glibc-minimal-langpack-2.34.9000-36.fc36.aarch64 gmp-1:6.2.1-1.fc36.aarch64 gnupg2-2.3.4-1.fc36.aarch64 gnutls-3.7.2-2.fc35.aarch64 gpgme-1.15.1-6.fc36.aarch64 grep-3.7-1.fc36.aarch64 ima-evm-utils-1.3.2-4.fc36.aarch64 json-c-0.15-2.fc35.aarch64 keyutils-libs-1.6.1-3.fc35.aarch64 krb5-libs-1.19.2-4.fc36.aarch64 libacl-2.3.1-2.fc35.aarch64 libarchive-3.5.2-4.fc36.aarch64 libassuan-2.5.5-3.fc35.aarch64 libattr-2.5.1-3.fc35.aarch64 libblkid-2.37.2-1.fc36.aarch64 libbrotli-1.0.9-6.fc35.aarch64 libcap-2.48-3.fc35.aarch64 libcap-ng-0.8.2-8.fc36.aarch64 libcom_err-1.46.5-1.fc36.aarch64 libcomps-0.1.18-1.fc36.aarch64 libcurl-7.81.0-1.fc36.aarch64 libdnf-0.65.0-1.fc36.aarch64 libffi-3.4.2-6.fc36.aarch64 libfsverity-1.4-6.fc36.aarch64 libgcc-11.2.1-7.fc36.aarch64 libgcrypt-1.9.4-1.fc36.aarch64 libgomp-11.2.1-7.fc36.aarch64 libgpg-error-1.43-1.fc36.aarch64 libidn2-2.3.2-3.fc36.aarch64 libksba-1.6.0-2.fc35.aarch64 libmodulemd-2.13.0-3.fc36.aarch64 libmount-2.37.2-1.fc36.aarch64 libnghttp2-1.46.0-1.fc36.aarch64 libnsl2-2.0.0-2.fc36.aarch64 libpsl-0.21.1-4.fc35.aarch64 librepo-1.14.2-1.fc36.aarch64 libreport-filesystem-2.15.2-6.fc35.noarch libselinux-3.3-2.fc36.aarch64 libsemanage-3.3-1.fc36.aarch64 libsepol-3.3-2.fc36.aarch64 libsigsegv-2.14-1.fc36.aarch64 libsmartcols-2.37.2-1.fc36.aarch64 libsolv-0.7.20-1.fc36.aarch64 libssh-0.9.6-2.fc36.aarch64 libssh-config-0.9.6-2.fc36.noarch libstdc++-11.2.1-7.fc36.aarch64 libtasn1-4.18.0-1.fc36.aarch64 libtirpc-1.3.2-1.rc1.fc36.aarch64 libunistring-0.9.10-14.fc35.aarch64 libuuid-2.37.2-1.fc36.aarch64 libverto-0.3.2-2.fc35.aarch64 libxcrypt-4.4.27-1.fc36.aarch64 libxml2-2.9.12-6.fc35.aarch64 libyaml-0.2.5-6.fc35.aarch64 libzstd-1.5.1-6.fc36.aarch64 lua-libs-5.4.3-2.fc35.aarch64 lz4-libs-1.9.3-3.fc35.aarch64 mpdecimal-2.5.1-2.fc35.aarch64 mpfr-4.1.0-8.fc35.aarch64 ncurses-base-6.2-8.20210508.fc35.noarch ncurses-libs-6.2-8.20210508.fc35.aarch64 nettle-3.7.3-2.fc35.aarch64 npth-1.6-7.fc35.aarch64 openldap-2.4.59-4.fc36.aarch64 openssl-libs-1:3.0.0-1.fc36.aarch64 p11-kit-0.23.22-5.fc36.aarch64 p11-kit-trust-0.23.22-5.fc36.aarch64 pcre-8.45-1.fc36.aarch64 pcre2-10.39-1.fc36.aarch64 pcre2-syntax-10.39-1.fc36.noarch popt-1.18-6.fc36.aarch64 publicsuffix-list-dafsa-20210518-3.fc36.noarch python-pip-wheel-21.3.1-1.fc36.noarch python-setuptools-wheel-59.6.0-1.fc36.noarch python3-3.10.1-2.fc36.aarch64 python3-dateutil-1:2.8.1-7.fc35.noarch python3-dbus-1.2.18-2.fc35.aarch64 python3-distro-1.6.0-1.fc35.noarch python3-dnf-4.10.0-1.fc36.noarch python3-dnf-plugins-core-4.0.24-1.fc36.noarch python3-gpg-1.15.1-6.fc36.aarch64 python3-hawkey-0.65.0-1.fc36.aarch64 python3-libcomps-0.1.18-1.fc36.aarch64 python3-libdnf-0.65.0-1.fc36.aarch64 python3-libs-3.10.1-2.fc36.aarch64 python3-rpm-4.17.0-1.fc36.1.aarch64 python3-six-1.16.0-4.fc35.noarch readline-8.1-3.fc35.aarch64 rpm-4.17.0-1.fc36.1.aarch64 rpm-build-libs-4.17.0-1.fc36.1.aarch64 rpm-libs-4.17.0-1.fc36.1.aarch64 rpm-sign-libs-4.17.0-1.fc36.1.aarch64 sed-4.8-8.fc35.aarch64 setup-2.13.9.1-2.fc35.noarch shadow-utils-2:4.9-8.fc36.aarch64 sqlite-libs-3.36.0-4.fc36.aarch64 systemd-libs-250.2-1.fc36.aarch64 tpm2-tss-3.1.0-4.fc36.aarch64 tzdata-2021e-1.fc36.noarch xz-libs-5.2.5-7.fc35.aarch64 zchunk-libs-1.1.15-3.fc36.aarch64 zlib-1.2.11-30.fc35.aarch64 Complete! Finish(bootstrap): dnf install Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1641986745.557547/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.15 INFO: Mock Version: 2.15 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 86 kB/s | 35 kB 00:00 fedora 15 MB/s | 59 MB 00:04 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash aarch64 5.1.8-3.fc36 fedora 1.6 M bzip2 aarch64 1.0.8-10.fc36 fedora 52 k coreutils aarch64 9.0-2.fc36 fedora 1.0 M cpio aarch64 2.13-11.fc36 fedora 268 k diffutils aarch64 3.8-1.fc35 fedora 398 k fedora-release-common noarch 36-0.12 fedora 21 k findutils aarch64 1:4.8.0-4.fc35 fedora 539 k gawk aarch64 5.1.1-1.fc36 fedora 1.0 M glibc-minimal-langpack aarch64 2.34.9000-36.fc36 fedora 147 k grep aarch64 3.7-1.fc36 fedora 292 k gzip aarch64 1.11-1.fc36 fedora 153 k info aarch64 6.8-2.fc35 fedora 220 k patch aarch64 2.7.6-15.fc35 fedora 124 k redhat-rpm-config noarch 207-1.fc36 fedora 67 k rpm-build aarch64 4.17.0-1.fc36.1 fedora 61 k sed aarch64 4.8-8.fc35 fedora 294 k shadow-utils aarch64 2:4.9-8.fc36 fedora 1.1 M tar aarch64 2:1.34-2.fc35 fedora 869 k unzip aarch64 6.0-56.fc36 fedora 177 k util-linux aarch64 2.37.2-1.fc36 fedora 2.2 M which aarch64 2.21-31.fc36 fedora 41 k xz aarch64 5.2.5-7.fc35 fedora 215 k Installing dependencies: acl aarch64 2.3.1-2.fc35 fedora 71 k alternatives aarch64 1.19-1.fc35 fedora 35 k audit-libs aarch64 3.0.6-2.fc36 fedora 115 k authselect aarch64 1.3.0-5.fc36 fedora 137 k authselect-libs aarch64 1.3.0-5.fc36 fedora 224 k basesystem noarch 11-12.fc35 fedora 7.0 k binutils aarch64 2.37-22.fc36 fedora 6.4 M binutils-gold aarch64 2.37-22.fc36 fedora 874 k bzip2-libs aarch64 1.0.8-10.fc36 fedora 42 k ca-certificates noarch 2021.2.52-2.fc36 fedora 365 k coreutils-common aarch64 9.0-2.fc36 fedora 2.0 M cracklib aarch64 2.9.6-27.fc36 fedora 81 k crypto-policies noarch 20211115-1.git1b1c04c.fc36 fedora 58 k cryptsetup-libs aarch64 2.4.2-1.fc36 fedora 433 k curl aarch64 7.81.0-1.fc36 fedora 306 k cyrus-sasl-lib aarch64 2.1.27-16.fc36 fedora 769 k dbus aarch64 1:1.13.20-2.fc36 fedora 7.5 k dbus-broker aarch64 29-4.fc36 fedora 166 k dbus-common noarch 1:1.13.20-2.fc36 fedora 14 k debugedit aarch64 5.0-2.fc35 fedora 75 k device-mapper aarch64 1.02.175-6.fc35 fedora 138 k device-mapper-libs aarch64 1.02.175-6.fc35 fedora 173 k dwz aarch64 0.14-2.fc35 fedora 125 k ed aarch64 1.14.2-11.fc35 fedora 73 k efi-srpm-macros noarch 5-4.fc36 fedora 22 k elfutils aarch64 0.186-1.fc36 fedora 517 k elfutils-debuginfod-client aarch64 0.186-1.fc36 fedora 40 k elfutils-default-yama-scope noarch 0.186-1.fc36 fedora 19 k elfutils-libelf aarch64 0.186-1.fc36 fedora 201 k elfutils-libs aarch64 0.186-1.fc36 fedora 257 k expat aarch64 2.4.1-2.fc35 fedora 105 k fedora-gpg-keys noarch 36-0.3 fedora 113 k fedora-release noarch 36-0.12 fedora 12 k fedora-release-identity-basic noarch 36-0.12 fedora 12 k fedora-repos noarch 36-0.3 fedora 11 k fedora-repos-rawhide noarch 36-0.3 fedora 10 k file aarch64 5.41-3.fc36 fedora 48 k file-libs aarch64 5.41-3.fc36 fedora 634 k filesystem aarch64 3.16-1.fc36 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-6.fc35 fedora 27 k fpc-srpm-macros noarch 1.3-4.fc35 fedora 7.6 k gdb-minimal aarch64 11.1-8.fc36 fedora 3.4 M gdbm-libs aarch64 1:1.22-1.fc36 fedora 58 k ghc-srpm-macros noarch 1.5.0-5.fc35 fedora 7.8 k glibc aarch64 2.34.9000-36.fc36 fedora 1.8 M glibc-common aarch64 2.34.9000-36.fc36 fedora 411 k glibc-gconv-extra aarch64 2.34.9000-36.fc36 fedora 1.7 M gmp aarch64 1:6.2.1-1.fc36 fedora 266 k gnat-srpm-macros noarch 4-14.fc35 fedora 8.2 k go-srpm-macros noarch 3.0.11-2.fc35 fedora 25 k json-c aarch64 0.15-2.fc35 fedora 43 k kernel-srpm-macros noarch 1.0-13.fc36 fedora 9.0 k keyutils-libs aarch64 1.6.1-3.fc35 fedora 31 k kmod-libs aarch64 29-6.fc36 fedora 65 k krb5-libs aarch64 1.19.2-4.fc36 fedora 732 k libacl aarch64 2.3.1-2.fc35 fedora 24 k libarchive aarch64 3.5.2-4.fc36 fedora 387 k libargon2 aarch64 20171227-7.fc35 fedora 28 k libattr aarch64 2.5.1-3.fc35 fedora 18 k libblkid aarch64 2.37.2-1.fc36 fedora 108 k libbrotli aarch64 1.0.9-6.fc35 fedora 313 k libcap aarch64 2.48-3.fc35 fedora 66 k libcap-ng aarch64 0.8.2-8.fc36 fedora 32 k libcom_err aarch64 1.46.5-1.fc36 fedora 25 k libcurl aarch64 7.81.0-1.fc36 fedora 291 k libdb aarch64 5.3.28-50.fc36 fedora 736 k libeconf aarch64 0.4.0-2.fc35 fedora 27 k libfdisk aarch64 2.37.2-1.fc36 fedora 151 k libffi aarch64 3.4.2-6.fc36 fedora 35 k libgcc aarch64 11.2.1-7.fc36 fedora 106 k libgcrypt aarch64 1.9.4-1.fc36 fedora 450 k libgomp aarch64 11.2.1-7.fc36 fedora 283 k libgpg-error aarch64 1.43-1.fc36 fedora 214 k libidn2 aarch64 2.3.2-3.fc36 fedora 104 k libmount aarch64 2.37.2-1.fc36 fedora 133 k libnghttp2 aarch64 1.46.0-1.fc36 fedora 69 k libnsl2 aarch64 2.0.0-2.fc36 fedora 30 k libpkgconf aarch64 1.8.0-1.fc35 fedora 36 k libpsl aarch64 0.21.1-4.fc35 fedora 63 k libpwquality aarch64 1.4.4-6.fc36 fedora 105 k libseccomp aarch64 2.5.3-1.fc36 fedora 71 k libselinux aarch64 3.3-2.fc36 fedora 84 k libsemanage aarch64 3.3-1.fc36 fedora 113 k libsepol aarch64 3.3-2.fc36 fedora 295 k libsigsegv aarch64 2.14-1.fc36 fedora 27 k libsmartcols aarch64 2.37.2-1.fc36 fedora 63 k libssh aarch64 0.9.6-2.fc36 fedora 203 k libssh-config noarch 0.9.6-2.fc36 fedora 7.4 k libstdc++ aarch64 11.2.1-7.fc36 fedora 711 k libtasn1 aarch64 4.18.0-1.fc36 fedora 74 k libtirpc aarch64 1.3.2-1.rc1.fc36 fedora 94 k libunistring aarch64 0.9.10-14.fc35 fedora 488 k libutempter aarch64 1.2.1-5.fc35 fedora 26 k libuuid aarch64 2.37.2-1.fc36 fedora 28 k libverto aarch64 0.3.2-2.fc35 fedora 21 k libxcrypt aarch64 4.4.27-1.fc36 fedora 123 k libxml2 aarch64 2.9.12-6.fc35 fedora 726 k libzstd aarch64 1.5.1-6.fc36 fedora 308 k lua-libs aarch64 5.4.3-2.fc35 fedora 212 k lua-srpm-macros noarch 1-5.fc35 fedora 8.4 k lz4-libs aarch64 1.9.3-3.fc35 fedora 67 k mpfr aarch64 4.1.0-8.fc35 fedora 239 k ncurses-base noarch 6.2-8.20210508.fc35 fedora 61 k ncurses-libs aarch64 6.2-8.20210508.fc35 fedora 314 k nim-srpm-macros noarch 3-5.fc35 fedora 8.4 k ocaml-srpm-macros noarch 6-5.fc35 fedora 7.8 k openblas-srpm-macros noarch 2-10.fc35 fedora 7.4 k openldap aarch64 2.4.59-4.fc36 fedora 254 k openssl-libs aarch64 1:3.0.0-1.fc36 fedora 2.0 M p11-kit aarch64 0.23.22-5.fc36 fedora 339 k p11-kit-trust aarch64 0.23.22-5.fc36 fedora 135 k pam aarch64 1.5.2-9.fc36 fedora 552 k pcre aarch64 8.45-1.fc36 fedora 180 k pcre2 aarch64 10.39-1.fc36 fedora 213 k pcre2-syntax noarch 10.39-1.fc36 fedora 144 k perl-srpm-macros noarch 1-42.fc35 fedora 8.3 k pkgconf aarch64 1.8.0-1.fc35 fedora 41 k pkgconf-m4 noarch 1.8.0-1.fc35 fedora 14 k pkgconf-pkg-config aarch64 1.8.0-1.fc35 fedora 10 k popt aarch64 1.18-6.fc36 fedora 58 k publicsuffix-list-dafsa noarch 20210518-3.fc36 fedora 58 k python-srpm-macros noarch 3.10-14.fc36 fedora 25 k qt5-srpm-macros noarch 5.15.2-3.fc35 fedora 8.2 k readline aarch64 8.1-3.fc35 fedora 211 k rpm aarch64 4.17.0-1.fc36.1 fedora 536 k rpm-build-libs aarch64 4.17.0-1.fc36.1 fedora 91 k rpm-libs aarch64 4.17.0-1.fc36.1 fedora 309 k rpmautospec-rpm-macros noarch 0.2.5-1.fc35 fedora 9.9 k rust-srpm-macros noarch 20-1.fc36 fedora 9.5 k setup noarch 2.13.9.1-2.fc35 fedora 143 k sqlite-libs aarch64 3.36.0-4.fc36 fedora 633 k systemd aarch64 250.2-1.fc36 fedora 4.1 M systemd-libs aarch64 250.2-1.fc36 fedora 599 k systemd-pam aarch64 250.2-1.fc36 fedora 323 k systemd-rpm-macros noarch 250.2-1.fc36 fedora 30 k tzdata noarch 2021e-1.fc36 fedora 431 k util-linux-core aarch64 2.37.2-1.fc36 fedora 435 k xxhash-libs aarch64 0.8.1-1.fc36 fedora 33 k xz-libs aarch64 5.2.5-7.fc35 fedora 90 k zip aarch64 3.0-31.fc35 fedora 253 k zlib aarch64 1.2.11-30.fc35 fedora 90 k zstd aarch64 1.5.1-6.fc36 fedora 387 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 164 Packages Total download size: 56 M Installed size: 229 M Downloading Packages: (1/164): alternatives-1.19-1.fc35.aarch64.rpm 91 kB/s | 35 kB 00:00 (2/164): audit-libs-3.0.6-2.fc36.aarch64.rpm 300 kB/s | 115 kB 00:00 (3/164): acl-2.3.1-2.fc35.aarch64.rpm 183 kB/s | 71 kB 00:00 (4/164): authselect-1.3.0-5.fc36.aarch64.rpm 28 MB/s | 137 kB 00:00 (5/164): authselect-libs-1.3.0-5.fc36.aarch64.r 39 MB/s | 224 kB 00:00 (6/164): basesystem-11-12.fc35.noarch.rpm 2.0 MB/s | 7.0 kB 00:00 (7/164): binutils-gold-2.37-22.fc36.aarch64.rpm 47 MB/s | 874 kB 00:00 (8/164): bash-5.1.8-3.fc36.aarch64.rpm 44 MB/s | 1.6 MB 00:00 (9/164): bzip2-1.0.8-10.fc36.aarch64.rpm 2.2 MB/s | 52 kB 00:00 (10/164): binutils-2.37-22.fc36.aarch64.rpm 99 MB/s | 6.4 MB 00:00 (11/164): bzip2-libs-1.0.8-10.fc36.aarch64.rpm 1.8 MB/s | 42 kB 00:00 (12/164): ca-certificates-2021.2.52-2.fc36.noar 19 MB/s | 365 kB 00:00 (13/164): cpio-2.13-11.fc36.aarch64.rpm 44 MB/s | 268 kB 00:00 (14/164): coreutils-common-9.0-2.fc36.aarch64.r 91 MB/s | 2.0 MB 00:00 (15/164): cracklib-2.9.6-27.fc36.aarch64.rpm 7.5 MB/s | 81 kB 00:00 (16/164): coreutils-9.0-2.fc36.aarch64.rpm 31 MB/s | 1.0 MB 00:00 (17/164): crypto-policies-20211115-1.git1b1c04c 7.8 MB/s | 58 kB 00:00 (18/164): cryptsetup-libs-2.4.2-1.fc36.aarch64. 51 MB/s | 433 kB 00:00 (19/164): dbus-1.13.20-2.fc36.aarch64.rpm 3.0 MB/s | 7.5 kB 00:00 (20/164): curl-7.81.0-1.fc36.aarch64.rpm 32 MB/s | 306 kB 00:00 (21/164): cyrus-sasl-lib-2.1.27-16.fc36.aarch64 70 MB/s | 769 kB 00:00 (22/164): dbus-broker-29-4.fc36.aarch64.rpm 31 MB/s | 166 kB 00:00 (23/164): dbus-common-1.13.20-2.fc36.noarch.rpm 6.5 MB/s | 14 kB 00:00 (24/164): debugedit-5.0-2.fc35.aarch64.rpm 17 MB/s | 75 kB 00:00 (25/164): device-mapper-1.02.175-6.fc35.aarch64 36 MB/s | 138 kB 00:00 (26/164): device-mapper-libs-1.02.175-6.fc35.aa 47 MB/s | 173 kB 00:00 (27/164): dwz-0.14-2.fc35.aarch64.rpm 32 MB/s | 125 kB 00:00 (28/164): diffutils-3.8-1.fc35.aarch64.rpm 54 MB/s | 398 kB 00:00 (29/164): ed-1.14.2-11.fc35.aarch64.rpm 11 MB/s | 73 kB 00:00 (30/164): efi-srpm-macros-5-4.fc36.noarch.rpm 6.5 MB/s | 22 kB 00:00 (31/164): elfutils-debuginfod-client-0.186-1.fc 12 MB/s | 40 kB 00:00 (32/164): elfutils-0.186-1.fc36.aarch64.rpm 75 MB/s | 517 kB 00:00 (33/164): elfutils-default-yama-scope-0.186-1.f 3.1 MB/s | 19 kB 00:00 (34/164): elfutils-libelf-0.186-1.fc36.aarch64. 45 MB/s | 201 kB 00:00 (35/164): expat-2.4.1-2.fc35.aarch64.rpm 30 MB/s | 105 kB 00:00 (36/164): elfutils-libs-0.186-1.fc36.aarch64.rp 36 MB/s | 257 kB 00:00 (37/164): fedora-gpg-keys-36-0.3.noarch.rpm 18 MB/s | 113 kB 00:00 (38/164): fedora-release-36-0.12.noarch.rpm 3.8 MB/s | 12 kB 00:00 (39/164): fedora-release-common-36-0.12.noarch. 6.6 MB/s | 21 kB 00:00 (40/164): fedora-release-identity-basic-36-0.12 3.6 MB/s | 12 kB 00:00 (41/164): fedora-repos-36-0.3.noarch.rpm 2.7 MB/s | 11 kB 00:00 (42/164): file-5.41-3.fc36.aarch64.rpm 16 MB/s | 48 kB 00:00 (43/164): fedora-repos-rawhide-36-0.3.noarch.rp 2.3 MB/s | 10 kB 00:00 (44/164): file-libs-5.41-3.fc36.aarch64.rpm 75 MB/s | 634 kB 00:00 (45/164): findutils-4.8.0-4.fc35.aarch64.rpm 74 MB/s | 539 kB 00:00 (46/164): fonts-srpm-macros-2.0.5-6.fc35.noarch 9.3 MB/s | 27 kB 00:00 (47/164): fpc-srpm-macros-1.3-4.fc35.noarch.rpm 2.7 MB/s | 7.6 kB 00:00 (48/164): gawk-5.1.1-1.fc36.aarch64.rpm 77 MB/s | 1.0 MB 00:00 (49/164): gdbm-libs-1.22-1.fc36.aarch64.rpm 13 MB/s | 58 kB 00:00 (50/164): filesystem-3.16-1.fc36.aarch64.rpm 28 MB/s | 1.1 MB 00:00 (51/164): ghc-srpm-macros-1.5.0-5.fc35.noarch.r 1.5 MB/s | 7.8 kB 00:00 (52/164): glibc-common-2.34.9000-36.fc36.aarch6 56 MB/s | 411 kB 00:00 (53/164): glibc-gconv-extra-2.34.9000-36.fc36.a 115 MB/s | 1.7 MB 00:00 (54/164): glibc-minimal-langpack-2.34.9000-36.f 23 MB/s | 147 kB 00:00 (55/164): gmp-6.2.1-1.fc36.aarch64.rpm 30 MB/s | 266 kB 00:00 (56/164): gnat-srpm-macros-4-14.fc35.noarch.rpm 4.3 MB/s | 8.2 kB 00:00 (57/164): glibc-2.34.9000-36.fc36.aarch64.rpm 31 MB/s | 1.8 MB 00:00 (58/164): go-srpm-macros-3.0.11-2.fc35.noarch.r 3.4 MB/s | 25 kB 00:00 (59/164): gdb-minimal-11.1-8.fc36.aarch64.rpm 35 MB/s | 3.4 MB 00:00 (60/164): grep-3.7-1.fc36.aarch64.rpm 21 MB/s | 292 kB 00:00 (61/164): gzip-1.11-1.fc36.aarch64.rpm 15 MB/s | 153 kB 00:00 (62/164): json-c-0.15-2.fc35.aarch64.rpm 11 MB/s | 43 kB 00:00 (63/164): kernel-srpm-macros-1.0-13.fc36.noarch 2.2 MB/s | 9.0 kB 00:00 (64/164): info-6.8-2.fc35.aarch64.rpm 31 MB/s | 220 kB 00:00 (65/164): keyutils-libs-1.6.1-3.fc35.aarch64.rp 9.1 MB/s | 31 kB 00:00 (66/164): kmod-libs-29-6.fc36.aarch64.rpm 17 MB/s | 65 kB 00:00 (67/164): libacl-2.3.1-2.fc35.aarch64.rpm 4.3 MB/s | 24 kB 00:00 (68/164): krb5-libs-1.19.2-4.fc36.aarch64.rpm 58 MB/s | 732 kB 00:00 (69/164): libarchive-3.5.2-4.fc36.aarch64.rpm 35 MB/s | 387 kB 00:00 (70/164): libargon2-20171227-7.fc35.aarch64.rpm 6.2 MB/s | 28 kB 00:00 (71/164): libattr-2.5.1-3.fc35.aarch64.rpm 5.4 MB/s | 18 kB 00:00 (72/164): libblkid-2.37.2-1.fc36.aarch64.rpm 21 MB/s | 108 kB 00:00 (73/164): libcap-2.48-3.fc35.aarch64.rpm 17 MB/s | 66 kB 00:00 (74/164): libbrotli-1.0.9-6.fc35.aarch64.rpm 32 MB/s | 313 kB 00:00 (75/164): libcap-ng-0.8.2-8.fc36.aarch64.rpm 6.1 MB/s | 32 kB 00:00 (76/164): libcom_err-1.46.5-1.fc36.aarch64.rpm 7.5 MB/s | 25 kB 00:00 (77/164): libcurl-7.81.0-1.fc36.aarch64.rpm 63 MB/s | 291 kB 00:00 (78/164): libeconf-0.4.0-2.fc35.aarch64.rpm 3.6 MB/s | 27 kB 00:00 (79/164): libdb-5.3.28-50.fc36.aarch64.rpm 67 MB/s | 736 kB 00:00 (80/164): libfdisk-2.37.2-1.fc36.aarch64.rpm 33 MB/s | 151 kB 00:00 (81/164): libffi-3.4.2-6.fc36.aarch64.rpm 8.4 MB/s | 35 kB 00:00 (82/164): libgcc-11.2.1-7.fc36.aarch64.rpm 18 MB/s | 106 kB 00:00 (83/164): libgcrypt-1.9.4-1.fc36.aarch64.rpm 46 MB/s | 450 kB 00:00 (84/164): libgomp-11.2.1-7.fc36.aarch64.rpm 29 MB/s | 283 kB 00:00 (85/164): libgpg-error-1.43-1.fc36.aarch64.rpm 44 MB/s | 214 kB 00:00 (86/164): libmount-2.37.2-1.fc36.aarch64.rpm 34 MB/s | 133 kB 00:00 (87/164): libidn2-2.3.2-3.fc36.aarch64.rpm 16 MB/s | 104 kB 00:00 (88/164): libnghttp2-1.46.0-1.fc36.aarch64.rpm 13 MB/s | 69 kB 00:00 (89/164): libnsl2-2.0.0-2.fc36.aarch64.rpm 11 MB/s | 30 kB 00:00 (90/164): libpkgconf-1.8.0-1.fc35.aarch64.rpm 16 MB/s | 36 kB 00:00 (91/164): libpsl-0.21.1-4.fc35.aarch64.rpm 15 MB/s | 63 kB 00:00 (92/164): libpwquality-1.4.4-6.fc36.aarch64.rpm 33 MB/s | 105 kB 00:00 (93/164): libseccomp-2.5.3-1.fc36.aarch64.rpm 23 MB/s | 71 kB 00:00 (94/164): libselinux-3.3-2.fc36.aarch64.rpm 22 MB/s | 84 kB 00:00 (95/164): libsemanage-3.3-1.fc36.aarch64.rpm 27 MB/s | 113 kB 00:00 (96/164): libsepol-3.3-2.fc36.aarch64.rpm 45 MB/s | 295 kB 00:00 (97/164): libsigsegv-2.14-1.fc36.aarch64.rpm 6.6 MB/s | 27 kB 00:00 (98/164): libsmartcols-2.37.2-1.fc36.aarch64.rp 15 MB/s | 63 kB 00:00 (99/164): libssh-0.9.6-2.fc36.aarch64.rpm 36 MB/s | 203 kB 00:00 (100/164): libssh-config-0.9.6-2.fc36.noarch.rp 1.6 MB/s | 7.4 kB 00:00 (101/164): libtasn1-4.18.0-1.fc36.aarch64.rpm 21 MB/s | 74 kB 00:00 (102/164): libunistring-0.9.10-14.fc35.aarch64. 51 MB/s | 488 kB 00:00 (103/164): libtirpc-1.3.2-1.rc1.fc36.aarch64.rp 7.4 MB/s | 94 kB 00:00 (104/164): libutempter-1.2.1-5.fc35.aarch64.rpm 8.3 MB/s | 26 kB 00:00 (105/164): libstdc++-11.2.1-7.fc36.aarch64.rpm 29 MB/s | 711 kB 00:00 (106/164): libuuid-2.37.2-1.fc36.aarch64.rpm 6.7 MB/s | 28 kB 00:00 (107/164): libverto-0.3.2-2.fc35.aarch64.rpm 5.5 MB/s | 21 kB 00:00 (108/164): libxcrypt-4.4.27-1.fc36.aarch64.rpm 21 MB/s | 123 kB 00:00 (109/164): libxml2-2.9.12-6.fc35.aarch64.rpm 65 MB/s | 726 kB 00:00 (110/164): libzstd-1.5.1-6.fc36.aarch64.rpm 28 MB/s | 308 kB 00:00 (111/164): lua-libs-5.4.3-2.fc35.aarch64.rpm 38 MB/s | 212 kB 00:00 (112/164): lua-srpm-macros-1-5.fc35.noarch.rpm 3.9 MB/s | 8.4 kB 00:00 (113/164): lz4-libs-1.9.3-3.fc35.aarch64.rpm 19 MB/s | 67 kB 00:00 (114/164): mpfr-4.1.0-8.fc35.aarch64.rpm 44 MB/s | 239 kB 00:00 (115/164): ncurses-base-6.2-8.20210508.fc35.noa 14 MB/s | 61 kB 00:00 (116/164): ncurses-libs-6.2-8.20210508.fc35.aar 46 MB/s | 314 kB 00:00 (117/164): nim-srpm-macros-3-5.fc35.noarch.rpm 3.5 MB/s | 8.4 kB 00:00 (118/164): ocaml-srpm-macros-6-5.fc35.noarch.rp 2.1 MB/s | 7.8 kB 00:00 (119/164): openblas-srpm-macros-2-10.fc35.noarc 3.4 MB/s | 7.4 kB 00:00 (120/164): openldap-2.4.59-4.fc36.aarch64.rpm 58 MB/s | 254 kB 00:00 (121/164): p11-kit-0.23.22-5.fc36.aarch64.rpm 43 MB/s | 339 kB 00:00 (122/164): p11-kit-trust-0.23.22-5.fc36.aarch64 15 MB/s | 135 kB 00:00 (123/164): openssl-libs-3.0.0-1.fc36.aarch64.rp 79 MB/s | 2.0 MB 00:00 (124/164): pam-1.5.2-9.fc36.aarch64.rpm 38 MB/s | 552 kB 00:00 (125/164): patch-2.7.6-15.fc35.aarch64.rpm 16 MB/s | 124 kB 00:00 (126/164): pcre-8.45-1.fc36.aarch64.rpm 32 MB/s | 180 kB 00:00 (127/164): pcre2-10.39-1.fc36.aarch64.rpm 35 MB/s | 213 kB 00:00 (128/164): pcre2-syntax-10.39-1.fc36.noarch.rpm 19 MB/s | 144 kB 00:00 (129/164): perl-srpm-macros-1-42.fc35.noarch.rp 3.8 MB/s | 8.3 kB 00:00 (130/164): pkgconf-1.8.0-1.fc35.aarch64.rpm 11 MB/s | 41 kB 00:00 (131/164): pkgconf-m4-1.8.0-1.fc35.noarch.rpm 5.3 MB/s | 14 kB 00:00 (132/164): pkgconf-pkg-config-1.8.0-1.fc35.aarc 4.1 MB/s | 10 kB 00:00 (133/164): popt-1.18-6.fc36.aarch64.rpm 16 MB/s | 58 kB 00:00 (134/164): publicsuffix-list-dafsa-20210518-3.f 11 MB/s | 58 kB 00:00 (135/164): python-srpm-macros-3.10-14.fc36.noar 5.7 MB/s | 25 kB 00:00 (136/164): qt5-srpm-macros-5.15.2-3.fc35.noarch 3.4 MB/s | 8.2 kB 00:00 (137/164): redhat-rpm-config-207-1.fc36.noarch. 22 MB/s | 67 kB 00:00 (138/164): rpm-build-4.17.0-1.fc36.1.aarch64.rp 13 MB/s | 61 kB 00:00 (139/164): rpm-4.17.0-1.fc36.1.aarch64.rpm 49 MB/s | 536 kB 00:00 (140/164): rpm-build-libs-4.17.0-1.fc36.1.aarch 28 MB/s | 91 kB 00:00 (141/164): readline-8.1-3.fc35.aarch64.rpm 12 MB/s | 211 kB 00:00 (142/164): rpm-libs-4.17.0-1.fc36.1.aarch64.rpm 51 MB/s | 309 kB 00:00 (143/164): rpmautospec-rpm-macros-0.2.5-1.fc35. 3.0 MB/s | 9.9 kB 00:00 (144/164): rust-srpm-macros-20-1.fc36.noarch.rp 4.9 MB/s | 9.5 kB 00:00 (145/164): sed-4.8-8.fc35.aarch64.rpm 59 MB/s | 294 kB 00:00 (146/164): shadow-utils-4.9-8.fc36.aarch64.rpm 84 MB/s | 1.1 MB 00:00 (147/164): setup-2.13.9.1-2.fc35.noarch.rpm 7.5 MB/s | 143 kB 00:00 (148/164): sqlite-libs-3.36.0-4.fc36.aarch64.rp 40 MB/s | 633 kB 00:00 (149/164): systemd-250.2-1.fc36.aarch64.rpm 131 MB/s | 4.1 MB 00:00 (150/164): systemd-pam-250.2-1.fc36.aarch64.rpm 14 MB/s | 323 kB 00:00 (151/164): systemd-libs-250.2-1.fc36.aarch64.rp 21 MB/s | 599 kB 00:00 (152/164): systemd-rpm-macros-250.2-1.fc36.noar 4.3 MB/s | 30 kB 00:00 (153/164): tar-1.34-2.fc35.aarch64.rpm 98 MB/s | 869 kB 00:00 (154/164): tzdata-2021e-1.fc36.noarch.rpm 44 MB/s | 431 kB 00:00 (155/164): unzip-6.0-56.fc36.aarch64.rpm 16 MB/s | 177 kB 00:00 (156/164): util-linux-core-2.37.2-1.fc36.aarch6 37 MB/s | 435 kB 00:00 (157/164): util-linux-2.37.2-1.fc36.aarch64.rpm 97 MB/s | 2.2 MB 00:00 (158/164): which-2.21-31.fc36.aarch64.rpm 4.0 MB/s | 41 kB 00:00 (159/164): xxhash-libs-0.8.1-1.fc36.aarch64.rpm 5.0 MB/s | 33 kB 00:00 (160/164): xz-5.2.5-7.fc35.aarch64.rpm 60 MB/s | 215 kB 00:00 (161/164): xz-libs-5.2.5-7.fc35.aarch64.rpm 14 MB/s | 90 kB 00:00 (162/164): zip-3.0-31.fc35.aarch64.rpm 42 MB/s | 253 kB 00:00 (163/164): zlib-1.2.11-30.fc35.aarch64.rpm 29 MB/s | 90 kB 00:00 (164/164): zstd-1.5.1-6.fc36.aarch64.rpm 91 MB/s | 387 kB 00:00 -------------------------------------------------------------------------------- Total 48 MB/s | 56 MB 00:01 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x38AB71F4: Userid : "Fedora (36) " Fingerprint: 53DE D2CB 922D 8B8D 9E63 FD18 999F 7CBF 38AB 71F4 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-36-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-36-primary (0x38AB71F4) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x9867C58F: Userid : "Fedora (35) " Fingerprint: 787E A6AE 1147 EEE5 6C40 B30C DB46 3971 9867 C58F From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-35-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.16-1.fc36.aarch64 1/1 Preparing : 1/1 Installing : libgcc-11.2.1-7.fc36.aarch64 1/164 Running scriptlet: libgcc-11.2.1-7.fc36.aarch64 1/164 Installing : crypto-policies-20211115-1.git1b1c04c.fc36.noarc 2/164 Running scriptlet: crypto-policies-20211115-1.git1b1c04c.fc36.noarc 2/164 Installing : fedora-release-identity-basic-36-0.12.noarch 3/164 Installing : tzdata-2021e-1.fc36.noarch 4/164 Installing : rust-srpm-macros-20-1.fc36.noarch 5/164 Installing : qt5-srpm-macros-5.15.2-3.fc35.noarch 6/164 Installing : publicsuffix-list-dafsa-20210518-3.fc36.noarch 7/164 Installing : pkgconf-m4-1.8.0-1.fc35.noarch 8/164 Installing : perl-srpm-macros-1-42.fc35.noarch 9/164 Installing : pcre2-syntax-10.39-1.fc36.noarch 10/164 Installing : openblas-srpm-macros-2-10.fc35.noarch 11/164 Installing : ocaml-srpm-macros-6-5.fc35.noarch 12/164 Installing : nim-srpm-macros-3-5.fc35.noarch 13/164 Installing : ncurses-base-6.2-8.20210508.fc35.noarch 14/164 Installing : libssh-config-0.9.6-2.fc36.noarch 15/164 Installing : kernel-srpm-macros-1.0-13.fc36.noarch 16/164 Installing : gnat-srpm-macros-4-14.fc35.noarch 17/164 Installing : ghc-srpm-macros-1.5.0-5.fc35.noarch 18/164 Installing : fpc-srpm-macros-1.3-4.fc35.noarch 19/164 Installing : fedora-gpg-keys-36-0.3.noarch 20/164 Installing : fedora-release-36-0.12.noarch 21/164 Installing : fedora-release-common-36-0.12.noarch 22/164 Installing : fedora-repos-rawhide-36-0.3.noarch 23/164 Installing : fedora-repos-36-0.3.noarch 24/164 Installing : setup-2.13.9.1-2.fc35.noarch 25/164 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.13.9.1-2.fc35.noarch 25/164 Installing : filesystem-3.16-1.fc36.aarch64 26/164 Installing : basesystem-11-12.fc35.noarch 27/164 Installing : glibc-gconv-extra-2.34.9000-36.fc36.aarch64 28/164 Running scriptlet: glibc-gconv-extra-2.34.9000-36.fc36.aarch64 28/164 Installing : glibc-minimal-langpack-2.34.9000-36.fc36.aarch64 29/164 Installing : glibc-common-2.34.9000-36.fc36.aarch64 30/164 Running scriptlet: glibc-2.34.9000-36.fc36.aarch64 31/164 Installing : glibc-2.34.9000-36.fc36.aarch64 31/164 Running scriptlet: glibc-2.34.9000-36.fc36.aarch64 31/164 Installing : ncurses-libs-6.2-8.20210508.fc35.aarch64 32/164 Installing : bash-5.1.8-3.fc36.aarch64 33/164 Running scriptlet: bash-5.1.8-3.fc36.aarch64 33/164 Installing : zlib-1.2.11-30.fc35.aarch64 34/164 Installing : xz-libs-5.2.5-7.fc35.aarch64 35/164 Installing : bzip2-libs-1.0.8-10.fc36.aarch64 36/164 Installing : elfutils-libelf-0.186-1.fc36.aarch64 37/164 Installing : libzstd-1.5.1-6.fc36.aarch64 38/164 Installing : libcap-2.48-3.fc35.aarch64 39/164 Installing : libuuid-2.37.2-1.fc36.aarch64 40/164 Installing : libxcrypt-4.4.27-1.fc36.aarch64 41/164 Installing : popt-1.18-6.fc36.aarch64 42/164 Installing : gmp-1:6.2.1-1.fc36.aarch64 43/164 Installing : libattr-2.5.1-3.fc35.aarch64 44/164 Installing : libacl-2.3.1-2.fc35.aarch64 45/164 Installing : libstdc++-11.2.1-7.fc36.aarch64 46/164 Installing : lz4-libs-1.9.3-3.fc35.aarch64 47/164 Installing : readline-8.1-3.fc35.aarch64 48/164 Installing : libcap-ng-0.8.2-8.fc36.aarch64 49/164 Installing : audit-libs-3.0.6-2.fc36.aarch64 50/164 Installing : libcom_err-1.46.5-1.fc36.aarch64 51/164 Installing : mpfr-4.1.0-8.fc35.aarch64 52/164 Installing : dwz-0.14-2.fc35.aarch64 53/164 Installing : unzip-6.0-56.fc36.aarch64 54/164 Installing : file-libs-5.41-3.fc36.aarch64 55/164 Installing : file-5.41-3.fc36.aarch64 56/164 Installing : sqlite-libs-3.36.0-4.fc36.aarch64 57/164 Installing : alternatives-1.19-1.fc35.aarch64 58/164 Installing : diffutils-3.8-1.fc35.aarch64 59/164 Installing : libsepol-3.3-2.fc36.aarch64 60/164 Installing : libsmartcols-2.37.2-1.fc36.aarch64 61/164 Installing : libunistring-0.9.10-14.fc35.aarch64 62/164 Installing : libidn2-2.3.2-3.fc36.aarch64 63/164 Installing : lua-libs-5.4.3-2.fc35.aarch64 64/164 Installing : pcre2-10.39-1.fc36.aarch64 65/164 Installing : libselinux-3.3-2.fc36.aarch64 66/164 Installing : sed-4.8-8.fc35.aarch64 67/164 Installing : findutils-1:4.8.0-4.fc35.aarch64 68/164 Installing : libsemanage-3.3-1.fc36.aarch64 69/164 Installing : shadow-utils-2:4.9-8.fc36.aarch64 70/164 Running scriptlet: libutempter-1.2.1-5.fc35.aarch64 71/164 Installing : libutempter-1.2.1-5.fc35.aarch64 71/164 Installing : tar-2:1.34-2.fc35.aarch64 72/164 Installing : libpsl-0.21.1-4.fc35.aarch64 73/164 Installing : zip-3.0-31.fc35.aarch64 74/164 Installing : zstd-1.5.1-6.fc36.aarch64 75/164 Installing : acl-2.3.1-2.fc35.aarch64 76/164 Installing : bzip2-1.0.8-10.fc36.aarch64 77/164 Installing : libxml2-2.9.12-6.fc35.aarch64 78/164 Installing : dbus-common-1:1.13.20-2.fc36.noarch 79/164 Running scriptlet: dbus-common-1:1.13.20-2.fc36.noarch 79/164 Installing : info-6.8-2.fc35.aarch64 80/164 Installing : ed-1.14.2-11.fc35.aarch64 81/164 Installing : patch-2.7.6-15.fc35.aarch64 82/164 Installing : systemd-rpm-macros-250.2-1.fc36.noarch 83/164 Installing : cpio-2.13-11.fc36.aarch64 84/164 Installing : expat-2.4.1-2.fc35.aarch64 85/164 Installing : gdbm-libs-1:1.22-1.fc36.aarch64 86/164 Installing : json-c-0.15-2.fc35.aarch64 87/164 Installing : keyutils-libs-1.6.1-3.fc35.aarch64 88/164 Installing : libargon2-20171227-7.fc35.aarch64 89/164 Installing : libbrotli-1.0.9-6.fc35.aarch64 90/164 Installing : libdb-5.3.28-50.fc36.aarch64 91/164 Installing : libeconf-0.4.0-2.fc35.aarch64 92/164 Installing : libffi-3.4.2-6.fc36.aarch64 93/164 Installing : p11-kit-0.23.22-5.fc36.aarch64 94/164 Installing : libgomp-11.2.1-7.fc36.aarch64 95/164 Installing : libgpg-error-1.43-1.fc36.aarch64 96/164 Installing : libgcrypt-1.9.4-1.fc36.aarch64 97/164 Installing : libnghttp2-1.46.0-1.fc36.aarch64 98/164 Installing : libpkgconf-1.8.0-1.fc35.aarch64 99/164 Installing : pkgconf-1.8.0-1.fc35.aarch64 100/164 Installing : pkgconf-pkg-config-1.8.0-1.fc35.aarch64 101/164 Installing : libseccomp-2.5.3-1.fc36.aarch64 102/164 Installing : libsigsegv-2.14-1.fc36.aarch64 103/164 Installing : gawk-5.1.1-1.fc36.aarch64 104/164 Installing : libtasn1-4.18.0-1.fc36.aarch64 105/164 Installing : p11-kit-trust-0.23.22-5.fc36.aarch64 106/164 Running scriptlet: p11-kit-trust-0.23.22-5.fc36.aarch64 106/164 Installing : libverto-0.3.2-2.fc35.aarch64 107/164 Installing : pcre-8.45-1.fc36.aarch64 108/164 Installing : grep-3.7-1.fc36.aarch64 109/164 Installing : xz-5.2.5-7.fc35.aarch64 110/164 Installing : xxhash-libs-0.8.1-1.fc36.aarch64 111/164 Installing : coreutils-common-9.0-2.fc36.aarch64 112/164 Installing : openssl-libs-1:3.0.0-1.fc36.aarch64 113/164 Installing : coreutils-9.0-2.fc36.aarch64 114/164 Running scriptlet: ca-certificates-2021.2.52-2.fc36.noarch 115/164 Installing : ca-certificates-2021.2.52-2.fc36.noarch 115/164 Running scriptlet: ca-certificates-2021.2.52-2.fc36.noarch 115/164 Installing : libblkid-2.37.2-1.fc36.aarch64 116/164 Running scriptlet: libblkid-2.37.2-1.fc36.aarch64 116/164 Installing : systemd-libs-250.2-1.fc36.aarch64 117/164 Running scriptlet: systemd-libs-250.2-1.fc36.aarch64 117/164 Installing : krb5-libs-1.19.2-4.fc36.aarch64 118/164 Installing : libmount-2.37.2-1.fc36.aarch64 119/164 Installing : util-linux-core-2.37.2-1.fc36.aarch64 120/164 Running scriptlet: util-linux-core-2.37.2-1.fc36.aarch64 120/164 Installing : libtirpc-1.3.2-1.rc1.fc36.aarch64 121/164 Installing : libfdisk-2.37.2-1.fc36.aarch64 122/164 Installing : gzip-1.11-1.fc36.aarch64 123/164 Installing : cracklib-2.9.6-27.fc36.aarch64 124/164 Installing : libnsl2-2.0.0-2.fc36.aarch64 125/164 Installing : cyrus-sasl-lib-2.1.27-16.fc36.aarch64 126/164 Installing : openldap-2.4.59-4.fc36.aarch64 127/164 Installing : libssh-0.9.6-2.fc36.aarch64 128/164 Installing : libcurl-7.81.0-1.fc36.aarch64 129/164 Installing : curl-7.81.0-1.fc36.aarch64 130/164 Running scriptlet: dbus-broker-29-4.fc36.aarch64 131/164 useradd warning: dbus's uid 81 outside of the SYS_UID_MIN 201 and SYS_UID_MAX 999 range. Installing : dbus-broker-29-4.fc36.aarch64 131/164 Running scriptlet: dbus-broker-29-4.fc36.aarch64 131/164 Installing : dbus-1:1.13.20-2.fc36.aarch64 132/164 Installing : kmod-libs-29-6.fc36.aarch64 133/164 Installing : libpwquality-1.4.4-6.fc36.aarch64 134/164 Installing : pam-1.5.2-9.fc36.aarch64 135/164 Installing : authselect-1.3.0-5.fc36.aarch64 136/164 Installing : util-linux-2.37.2-1.fc36.aarch64 137/164 Running scriptlet: util-linux-2.37.2-1.fc36.aarch64 137/164 Running scriptlet: authselect-libs-1.3.0-5.fc36.aarch64 138/164 Installing : authselect-libs-1.3.0-5.fc36.aarch64 138/164 Installing : cryptsetup-libs-2.4.2-1.fc36.aarch64 139/164 Installing : device-mapper-libs-1.02.175-6.fc35.aarch64 140/164 Installing : device-mapper-1.02.175-6.fc35.aarch64 141/164 Installing : elfutils-debuginfod-client-0.186-1.fc36.aarch64 142/164 Installing : elfutils-libs-0.186-1.fc36.aarch64 143/164 Installing : elfutils-default-yama-scope-0.186-1.fc36.noarch 144/164 Running scriptlet: elfutils-default-yama-scope-0.186-1.fc36.noarch 144/164 Installing : systemd-pam-250.2-1.fc36.aarch64 145/164 Installing : systemd-250.2-1.fc36.aarch64 146/164 warning: group systemd-journal does not exist - using root Running scriptlet: systemd-250.2-1.fc36.aarch64 146/164 Creating group 'input' with GID 104. Creating group 'kvm' with GID 36. Creating group 'render' with GID 105. Creating group 'sgx' with GID 106. Creating group 'systemd-journal' with GID 190. Creating group 'systemd-network' with GID 192. Creating user 'systemd-network' (systemd Network Management) with UID 192 and GID 192. Creating group 'systemd-oom' with GID 999. Creating user 'systemd-oom' (systemd Userspace OOM Killer) with UID 999 and GID 999. Installing : binutils-gold-2.37-22.fc36.aarch64 147/164 Installing : binutils-2.37-22.fc36.aarch64 148/164 Running scriptlet: binutils-2.37-22.fc36.aarch64 148/164 Installing : elfutils-0.186-1.fc36.aarch64 149/164 Installing : gdb-minimal-11.1-8.fc36.aarch64 150/164 Installing : debugedit-5.0-2.fc35.aarch64 151/164 Installing : libarchive-3.5.2-4.fc36.aarch64 152/164 Installing : rpm-4.17.0-1.fc36.1.aarch64 153/164 Installing : rpm-libs-4.17.0-1.fc36.1.aarch64 154/164 Installing : rpm-build-libs-4.17.0-1.fc36.1.aarch64 155/164 Installing : efi-srpm-macros-5-4.fc36.noarch 156/164 Installing : lua-srpm-macros-1-5.fc35.noarch 157/164 Installing : rpmautospec-rpm-macros-0.2.5-1.fc35.noarch 158/164 Installing : fonts-srpm-macros-1:2.0.5-6.fc35.noarch 159/164 Installing : go-srpm-macros-3.0.11-2.fc35.noarch 160/164 Installing : python-srpm-macros-3.10-14.fc36.noarch 161/164 Installing : redhat-rpm-config-207-1.fc36.noarch 162/164 Installing : rpm-build-4.17.0-1.fc36.1.aarch64 163/164 Installing : which-2.21-31.fc36.aarch64 164/164 Running scriptlet: filesystem-3.16-1.fc36.aarch64 164/164 Running scriptlet: ca-certificates-2021.2.52-2.fc36.noarch 164/164 Running scriptlet: authselect-libs-1.3.0-5.fc36.aarch64 164/164 Running scriptlet: rpm-4.17.0-1.fc36.1.aarch64 164/164 Running scriptlet: which-2.21-31.fc36.aarch64 164/164 Verifying : acl-2.3.1-2.fc35.aarch64 1/164 Verifying : alternatives-1.19-1.fc35.aarch64 2/164 Verifying : audit-libs-3.0.6-2.fc36.aarch64 3/164 Verifying : authselect-1.3.0-5.fc36.aarch64 4/164 Verifying : authselect-libs-1.3.0-5.fc36.aarch64 5/164 Verifying : basesystem-11-12.fc35.noarch 6/164 Verifying : bash-5.1.8-3.fc36.aarch64 7/164 Verifying : binutils-2.37-22.fc36.aarch64 8/164 Verifying : binutils-gold-2.37-22.fc36.aarch64 9/164 Verifying : bzip2-1.0.8-10.fc36.aarch64 10/164 Verifying : bzip2-libs-1.0.8-10.fc36.aarch64 11/164 Verifying : ca-certificates-2021.2.52-2.fc36.noarch 12/164 Verifying : coreutils-9.0-2.fc36.aarch64 13/164 Verifying : coreutils-common-9.0-2.fc36.aarch64 14/164 Verifying : cpio-2.13-11.fc36.aarch64 15/164 Verifying : cracklib-2.9.6-27.fc36.aarch64 16/164 Verifying : crypto-policies-20211115-1.git1b1c04c.fc36.noarc 17/164 Verifying : cryptsetup-libs-2.4.2-1.fc36.aarch64 18/164 Verifying : curl-7.81.0-1.fc36.aarch64 19/164 Verifying : cyrus-sasl-lib-2.1.27-16.fc36.aarch64 20/164 Verifying : dbus-1:1.13.20-2.fc36.aarch64 21/164 Verifying : dbus-broker-29-4.fc36.aarch64 22/164 Verifying : dbus-common-1:1.13.20-2.fc36.noarch 23/164 Verifying : debugedit-5.0-2.fc35.aarch64 24/164 Verifying : device-mapper-1.02.175-6.fc35.aarch64 25/164 Verifying : device-mapper-libs-1.02.175-6.fc35.aarch64 26/164 Verifying : diffutils-3.8-1.fc35.aarch64 27/164 Verifying : dwz-0.14-2.fc35.aarch64 28/164 Verifying : ed-1.14.2-11.fc35.aarch64 29/164 Verifying : efi-srpm-macros-5-4.fc36.noarch 30/164 Verifying : elfutils-0.186-1.fc36.aarch64 31/164 Verifying : elfutils-debuginfod-client-0.186-1.fc36.aarch64 32/164 Verifying : elfutils-default-yama-scope-0.186-1.fc36.noarch 33/164 Verifying : elfutils-libelf-0.186-1.fc36.aarch64 34/164 Verifying : elfutils-libs-0.186-1.fc36.aarch64 35/164 Verifying : expat-2.4.1-2.fc35.aarch64 36/164 Verifying : fedora-gpg-keys-36-0.3.noarch 37/164 Verifying : fedora-release-36-0.12.noarch 38/164 Verifying : fedora-release-common-36-0.12.noarch 39/164 Verifying : fedora-release-identity-basic-36-0.12.noarch 40/164 Verifying : fedora-repos-36-0.3.noarch 41/164 Verifying : fedora-repos-rawhide-36-0.3.noarch 42/164 Verifying : file-5.41-3.fc36.aarch64 43/164 Verifying : file-libs-5.41-3.fc36.aarch64 44/164 Verifying : filesystem-3.16-1.fc36.aarch64 45/164 Verifying : findutils-1:4.8.0-4.fc35.aarch64 46/164 Verifying : fonts-srpm-macros-1:2.0.5-6.fc35.noarch 47/164 Verifying : fpc-srpm-macros-1.3-4.fc35.noarch 48/164 Verifying : gawk-5.1.1-1.fc36.aarch64 49/164 Verifying : gdb-minimal-11.1-8.fc36.aarch64 50/164 Verifying : gdbm-libs-1:1.22-1.fc36.aarch64 51/164 Verifying : ghc-srpm-macros-1.5.0-5.fc35.noarch 52/164 Verifying : glibc-2.34.9000-36.fc36.aarch64 53/164 Verifying : glibc-common-2.34.9000-36.fc36.aarch64 54/164 Verifying : glibc-gconv-extra-2.34.9000-36.fc36.aarch64 55/164 Verifying : glibc-minimal-langpack-2.34.9000-36.fc36.aarch64 56/164 Verifying : gmp-1:6.2.1-1.fc36.aarch64 57/164 Verifying : gnat-srpm-macros-4-14.fc35.noarch 58/164 Verifying : go-srpm-macros-3.0.11-2.fc35.noarch 59/164 Verifying : grep-3.7-1.fc36.aarch64 60/164 Verifying : gzip-1.11-1.fc36.aarch64 61/164 Verifying : info-6.8-2.fc35.aarch64 62/164 Verifying : json-c-0.15-2.fc35.aarch64 63/164 Verifying : kernel-srpm-macros-1.0-13.fc36.noarch 64/164 Verifying : keyutils-libs-1.6.1-3.fc35.aarch64 65/164 Verifying : kmod-libs-29-6.fc36.aarch64 66/164 Verifying : krb5-libs-1.19.2-4.fc36.aarch64 67/164 Verifying : libacl-2.3.1-2.fc35.aarch64 68/164 Verifying : libarchive-3.5.2-4.fc36.aarch64 69/164 Verifying : libargon2-20171227-7.fc35.aarch64 70/164 Verifying : libattr-2.5.1-3.fc35.aarch64 71/164 Verifying : libblkid-2.37.2-1.fc36.aarch64 72/164 Verifying : libbrotli-1.0.9-6.fc35.aarch64 73/164 Verifying : libcap-2.48-3.fc35.aarch64 74/164 Verifying : libcap-ng-0.8.2-8.fc36.aarch64 75/164 Verifying : libcom_err-1.46.5-1.fc36.aarch64 76/164 Verifying : libcurl-7.81.0-1.fc36.aarch64 77/164 Verifying : libdb-5.3.28-50.fc36.aarch64 78/164 Verifying : libeconf-0.4.0-2.fc35.aarch64 79/164 Verifying : libfdisk-2.37.2-1.fc36.aarch64 80/164 Verifying : libffi-3.4.2-6.fc36.aarch64 81/164 Verifying : libgcc-11.2.1-7.fc36.aarch64 82/164 Verifying : libgcrypt-1.9.4-1.fc36.aarch64 83/164 Verifying : libgomp-11.2.1-7.fc36.aarch64 84/164 Verifying : libgpg-error-1.43-1.fc36.aarch64 85/164 Verifying : libidn2-2.3.2-3.fc36.aarch64 86/164 Verifying : libmount-2.37.2-1.fc36.aarch64 87/164 Verifying : libnghttp2-1.46.0-1.fc36.aarch64 88/164 Verifying : libnsl2-2.0.0-2.fc36.aarch64 89/164 Verifying : libpkgconf-1.8.0-1.fc35.aarch64 90/164 Verifying : libpsl-0.21.1-4.fc35.aarch64 91/164 Verifying : libpwquality-1.4.4-6.fc36.aarch64 92/164 Verifying : libseccomp-2.5.3-1.fc36.aarch64 93/164 Verifying : libselinux-3.3-2.fc36.aarch64 94/164 Verifying : libsemanage-3.3-1.fc36.aarch64 95/164 Verifying : libsepol-3.3-2.fc36.aarch64 96/164 Verifying : libsigsegv-2.14-1.fc36.aarch64 97/164 Verifying : libsmartcols-2.37.2-1.fc36.aarch64 98/164 Verifying : libssh-0.9.6-2.fc36.aarch64 99/164 Verifying : libssh-config-0.9.6-2.fc36.noarch 100/164 Verifying : libstdc++-11.2.1-7.fc36.aarch64 101/164 Verifying : libtasn1-4.18.0-1.fc36.aarch64 102/164 Verifying : libtirpc-1.3.2-1.rc1.fc36.aarch64 103/164 Verifying : libunistring-0.9.10-14.fc35.aarch64 104/164 Verifying : libutempter-1.2.1-5.fc35.aarch64 105/164 Verifying : libuuid-2.37.2-1.fc36.aarch64 106/164 Verifying : libverto-0.3.2-2.fc35.aarch64 107/164 Verifying : libxcrypt-4.4.27-1.fc36.aarch64 108/164 Verifying : libxml2-2.9.12-6.fc35.aarch64 109/164 Verifying : libzstd-1.5.1-6.fc36.aarch64 110/164 Verifying : lua-libs-5.4.3-2.fc35.aarch64 111/164 Verifying : lua-srpm-macros-1-5.fc35.noarch 112/164 Verifying : lz4-libs-1.9.3-3.fc35.aarch64 113/164 Verifying : mpfr-4.1.0-8.fc35.aarch64 114/164 Verifying : ncurses-base-6.2-8.20210508.fc35.noarch 115/164 Verifying : ncurses-libs-6.2-8.20210508.fc35.aarch64 116/164 Verifying : nim-srpm-macros-3-5.fc35.noarch 117/164 Verifying : ocaml-srpm-macros-6-5.fc35.noarch 118/164 Verifying : openblas-srpm-macros-2-10.fc35.noarch 119/164 Verifying : openldap-2.4.59-4.fc36.aarch64 120/164 Verifying : openssl-libs-1:3.0.0-1.fc36.aarch64 121/164 Verifying : p11-kit-0.23.22-5.fc36.aarch64 122/164 Verifying : p11-kit-trust-0.23.22-5.fc36.aarch64 123/164 Verifying : pam-1.5.2-9.fc36.aarch64 124/164 Verifying : patch-2.7.6-15.fc35.aarch64 125/164 Verifying : pcre-8.45-1.fc36.aarch64 126/164 Verifying : pcre2-10.39-1.fc36.aarch64 127/164 Verifying : pcre2-syntax-10.39-1.fc36.noarch 128/164 Verifying : perl-srpm-macros-1-42.fc35.noarch 129/164 Verifying : pkgconf-1.8.0-1.fc35.aarch64 130/164 Verifying : pkgconf-m4-1.8.0-1.fc35.noarch 131/164 Verifying : pkgconf-pkg-config-1.8.0-1.fc35.aarch64 132/164 Verifying : popt-1.18-6.fc36.aarch64 133/164 Verifying : publicsuffix-list-dafsa-20210518-3.fc36.noarch 134/164 Verifying : python-srpm-macros-3.10-14.fc36.noarch 135/164 Verifying : qt5-srpm-macros-5.15.2-3.fc35.noarch 136/164 Verifying : readline-8.1-3.fc35.aarch64 137/164 Verifying : redhat-rpm-config-207-1.fc36.noarch 138/164 Verifying : rpm-4.17.0-1.fc36.1.aarch64 139/164 Verifying : rpm-build-4.17.0-1.fc36.1.aarch64 140/164 Verifying : rpm-build-libs-4.17.0-1.fc36.1.aarch64 141/164 Verifying : rpm-libs-4.17.0-1.fc36.1.aarch64 142/164 Verifying : rpmautospec-rpm-macros-0.2.5-1.fc35.noarch 143/164 Verifying : rust-srpm-macros-20-1.fc36.noarch 144/164 Verifying : sed-4.8-8.fc35.aarch64 145/164 Verifying : setup-2.13.9.1-2.fc35.noarch 146/164 Verifying : shadow-utils-2:4.9-8.fc36.aarch64 147/164 Verifying : sqlite-libs-3.36.0-4.fc36.aarch64 148/164 Verifying : systemd-250.2-1.fc36.aarch64 149/164 Verifying : systemd-libs-250.2-1.fc36.aarch64 150/164 Verifying : systemd-pam-250.2-1.fc36.aarch64 151/164 Verifying : systemd-rpm-macros-250.2-1.fc36.noarch 152/164 Verifying : tar-2:1.34-2.fc35.aarch64 153/164 Verifying : tzdata-2021e-1.fc36.noarch 154/164 Verifying : unzip-6.0-56.fc36.aarch64 155/164 Verifying : util-linux-2.37.2-1.fc36.aarch64 156/164 Verifying : util-linux-core-2.37.2-1.fc36.aarch64 157/164 Verifying : which-2.21-31.fc36.aarch64 158/164 Verifying : xxhash-libs-0.8.1-1.fc36.aarch64 159/164 Verifying : xz-5.2.5-7.fc35.aarch64 160/164 Verifying : xz-libs-5.2.5-7.fc35.aarch64 161/164 Verifying : zip-3.0-31.fc35.aarch64 162/164 Verifying : zlib-1.2.11-30.fc35.aarch64 163/164 Verifying : zstd-1.5.1-6.fc36.aarch64 164/164 Installed: acl-2.3.1-2.fc35.aarch64 alternatives-1.19-1.fc35.aarch64 audit-libs-3.0.6-2.fc36.aarch64 authselect-1.3.0-5.fc36.aarch64 authselect-libs-1.3.0-5.fc36.aarch64 basesystem-11-12.fc35.noarch bash-5.1.8-3.fc36.aarch64 binutils-2.37-22.fc36.aarch64 binutils-gold-2.37-22.fc36.aarch64 bzip2-1.0.8-10.fc36.aarch64 bzip2-libs-1.0.8-10.fc36.aarch64 ca-certificates-2021.2.52-2.fc36.noarch coreutils-9.0-2.fc36.aarch64 coreutils-common-9.0-2.fc36.aarch64 cpio-2.13-11.fc36.aarch64 cracklib-2.9.6-27.fc36.aarch64 crypto-policies-20211115-1.git1b1c04c.fc36.noarch cryptsetup-libs-2.4.2-1.fc36.aarch64 curl-7.81.0-1.fc36.aarch64 cyrus-sasl-lib-2.1.27-16.fc36.aarch64 dbus-1:1.13.20-2.fc36.aarch64 dbus-broker-29-4.fc36.aarch64 dbus-common-1:1.13.20-2.fc36.noarch debugedit-5.0-2.fc35.aarch64 device-mapper-1.02.175-6.fc35.aarch64 device-mapper-libs-1.02.175-6.fc35.aarch64 diffutils-3.8-1.fc35.aarch64 dwz-0.14-2.fc35.aarch64 ed-1.14.2-11.fc35.aarch64 efi-srpm-macros-5-4.fc36.noarch elfutils-0.186-1.fc36.aarch64 elfutils-debuginfod-client-0.186-1.fc36.aarch64 elfutils-default-yama-scope-0.186-1.fc36.noarch elfutils-libelf-0.186-1.fc36.aarch64 elfutils-libs-0.186-1.fc36.aarch64 expat-2.4.1-2.fc35.aarch64 fedora-gpg-keys-36-0.3.noarch fedora-release-36-0.12.noarch fedora-release-common-36-0.12.noarch fedora-release-identity-basic-36-0.12.noarch fedora-repos-36-0.3.noarch fedora-repos-rawhide-36-0.3.noarch file-5.41-3.fc36.aarch64 file-libs-5.41-3.fc36.aarch64 filesystem-3.16-1.fc36.aarch64 findutils-1:4.8.0-4.fc35.aarch64 fonts-srpm-macros-1:2.0.5-6.fc35.noarch fpc-srpm-macros-1.3-4.fc35.noarch gawk-5.1.1-1.fc36.aarch64 gdb-minimal-11.1-8.fc36.aarch64 gdbm-libs-1:1.22-1.fc36.aarch64 ghc-srpm-macros-1.5.0-5.fc35.noarch glibc-2.34.9000-36.fc36.aarch64 glibc-common-2.34.9000-36.fc36.aarch64 glibc-gconv-extra-2.34.9000-36.fc36.aarch64 glibc-minimal-langpack-2.34.9000-36.fc36.aarch64 gmp-1:6.2.1-1.fc36.aarch64 gnat-srpm-macros-4-14.fc35.noarch go-srpm-macros-3.0.11-2.fc35.noarch grep-3.7-1.fc36.aarch64 gzip-1.11-1.fc36.aarch64 info-6.8-2.fc35.aarch64 json-c-0.15-2.fc35.aarch64 kernel-srpm-macros-1.0-13.fc36.noarch keyutils-libs-1.6.1-3.fc35.aarch64 kmod-libs-29-6.fc36.aarch64 krb5-libs-1.19.2-4.fc36.aarch64 libacl-2.3.1-2.fc35.aarch64 libarchive-3.5.2-4.fc36.aarch64 libargon2-20171227-7.fc35.aarch64 libattr-2.5.1-3.fc35.aarch64 libblkid-2.37.2-1.fc36.aarch64 libbrotli-1.0.9-6.fc35.aarch64 libcap-2.48-3.fc35.aarch64 libcap-ng-0.8.2-8.fc36.aarch64 libcom_err-1.46.5-1.fc36.aarch64 libcurl-7.81.0-1.fc36.aarch64 libdb-5.3.28-50.fc36.aarch64 libeconf-0.4.0-2.fc35.aarch64 libfdisk-2.37.2-1.fc36.aarch64 libffi-3.4.2-6.fc36.aarch64 libgcc-11.2.1-7.fc36.aarch64 libgcrypt-1.9.4-1.fc36.aarch64 libgomp-11.2.1-7.fc36.aarch64 libgpg-error-1.43-1.fc36.aarch64 libidn2-2.3.2-3.fc36.aarch64 libmount-2.37.2-1.fc36.aarch64 libnghttp2-1.46.0-1.fc36.aarch64 libnsl2-2.0.0-2.fc36.aarch64 libpkgconf-1.8.0-1.fc35.aarch64 libpsl-0.21.1-4.fc35.aarch64 libpwquality-1.4.4-6.fc36.aarch64 libseccomp-2.5.3-1.fc36.aarch64 libselinux-3.3-2.fc36.aarch64 libsemanage-3.3-1.fc36.aarch64 libsepol-3.3-2.fc36.aarch64 libsigsegv-2.14-1.fc36.aarch64 libsmartcols-2.37.2-1.fc36.aarch64 libssh-0.9.6-2.fc36.aarch64 libssh-config-0.9.6-2.fc36.noarch libstdc++-11.2.1-7.fc36.aarch64 libtasn1-4.18.0-1.fc36.aarch64 libtirpc-1.3.2-1.rc1.fc36.aarch64 libunistring-0.9.10-14.fc35.aarch64 libutempter-1.2.1-5.fc35.aarch64 libuuid-2.37.2-1.fc36.aarch64 libverto-0.3.2-2.fc35.aarch64 libxcrypt-4.4.27-1.fc36.aarch64 libxml2-2.9.12-6.fc35.aarch64 libzstd-1.5.1-6.fc36.aarch64 lua-libs-5.4.3-2.fc35.aarch64 lua-srpm-macros-1-5.fc35.noarch lz4-libs-1.9.3-3.fc35.aarch64 mpfr-4.1.0-8.fc35.aarch64 ncurses-base-6.2-8.20210508.fc35.noarch ncurses-libs-6.2-8.20210508.fc35.aarch64 nim-srpm-macros-3-5.fc35.noarch ocaml-srpm-macros-6-5.fc35.noarch openblas-srpm-macros-2-10.fc35.noarch openldap-2.4.59-4.fc36.aarch64 openssl-libs-1:3.0.0-1.fc36.aarch64 p11-kit-0.23.22-5.fc36.aarch64 p11-kit-trust-0.23.22-5.fc36.aarch64 pam-1.5.2-9.fc36.aarch64 patch-2.7.6-15.fc35.aarch64 pcre-8.45-1.fc36.aarch64 pcre2-10.39-1.fc36.aarch64 pcre2-syntax-10.39-1.fc36.noarch perl-srpm-macros-1-42.fc35.noarch pkgconf-1.8.0-1.fc35.aarch64 pkgconf-m4-1.8.0-1.fc35.noarch pkgconf-pkg-config-1.8.0-1.fc35.aarch64 popt-1.18-6.fc36.aarch64 publicsuffix-list-dafsa-20210518-3.fc36.noarch python-srpm-macros-3.10-14.fc36.noarch qt5-srpm-macros-5.15.2-3.fc35.noarch readline-8.1-3.fc35.aarch64 redhat-rpm-config-207-1.fc36.noarch rpm-4.17.0-1.fc36.1.aarch64 rpm-build-4.17.0-1.fc36.1.aarch64 rpm-build-libs-4.17.0-1.fc36.1.aarch64 rpm-libs-4.17.0-1.fc36.1.aarch64 rpmautospec-rpm-macros-0.2.5-1.fc35.noarch rust-srpm-macros-20-1.fc36.noarch sed-4.8-8.fc35.aarch64 setup-2.13.9.1-2.fc35.noarch shadow-utils-2:4.9-8.fc36.aarch64 sqlite-libs-3.36.0-4.fc36.aarch64 systemd-250.2-1.fc36.aarch64 systemd-libs-250.2-1.fc36.aarch64 systemd-pam-250.2-1.fc36.aarch64 systemd-rpm-macros-250.2-1.fc36.noarch tar-2:1.34-2.fc35.aarch64 tzdata-2021e-1.fc36.noarch unzip-6.0-56.fc36.aarch64 util-linux-2.37.2-1.fc36.aarch64 util-linux-core-2.37.2-1.fc36.aarch64 which-2.21-31.fc36.aarch64 xxhash-libs-0.8.1-1.fc36.aarch64 xz-5.2.5-7.fc35.aarch64 xz-libs-5.2.5-7.fc35.aarch64 zip-3.0-31.fc35.aarch64 zlib-1.2.11-30.fc35.aarch64 zstd-1.5.1-6.fc36.aarch64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: ghc-srpm-macros-1.5.0-5.fc35.noarch curl-7.81.0-1.fc36.aarch64 patch-2.7.6-15.fc35.aarch64 shadow-utils-4.9-8.fc36.aarch64 gdbm-libs-1.22-1.fc36.aarch64 p11-kit-0.23.22-5.fc36.aarch64 pkgconf-1.8.0-1.fc35.aarch64 glibc-2.34.9000-36.fc36.aarch64 libeconf-0.4.0-2.fc35.aarch64 elfutils-0.186-1.fc36.aarch64 libssh-config-0.9.6-2.fc36.noarch bzip2-1.0.8-10.fc36.aarch64 bzip2-libs-1.0.8-10.fc36.aarch64 libselinux-3.3-2.fc36.aarch64 libgomp-11.2.1-7.fc36.aarch64 authselect-libs-1.3.0-5.fc36.aarch64 elfutils-libs-0.186-1.fc36.aarch64 device-mapper-1.02.175-6.fc35.aarch64 xz-libs-5.2.5-7.fc35.aarch64 basesystem-11-12.fc35.noarch elfutils-libelf-0.186-1.fc36.aarch64 libcap-2.48-3.fc35.aarch64 rust-srpm-macros-20-1.fc36.noarch fpc-srpm-macros-1.3-4.fc35.noarch which-2.21-31.fc36.aarch64 go-srpm-macros-3.0.11-2.fc35.noarch rpm-build-4.17.0-1.fc36.1.aarch64 openssl-libs-3.0.0-1.fc36.aarch64 libattr-2.5.1-3.fc35.aarch64 systemd-libs-250.2-1.fc36.aarch64 efi-srpm-macros-5-4.fc36.noarch gdb-minimal-11.1-8.fc36.aarch64 libblkid-2.37.2-1.fc36.aarch64 pcre2-10.39-1.fc36.aarch64 mpfr-4.1.0-8.fc35.aarch64 coreutils-common-9.0-2.fc36.aarch64 gawk-5.1.1-1.fc36.aarch64 libstdc++-11.2.1-7.fc36.aarch64 libbrotli-1.0.9-6.fc35.aarch64 dwz-0.14-2.fc35.aarch64 kmod-libs-29-6.fc36.aarch64 popt-1.18-6.fc36.aarch64 libgcc-11.2.1-7.fc36.aarch64 dbus-common-1.13.20-2.fc36.noarch audit-libs-3.0.6-2.fc36.aarch64 pkgconf-pkg-config-1.8.0-1.fc35.aarch64 libgcrypt-1.9.4-1.fc36.aarch64 acl-2.3.1-2.fc35.aarch64 gzip-1.11-1.fc36.aarch64 libarchive-3.5.2-4.fc36.aarch64 kernel-srpm-macros-1.0-13.fc36.noarch libseccomp-2.5.3-1.fc36.aarch64 ncurses-libs-6.2-8.20210508.fc35.aarch64 libpkgconf-1.8.0-1.fc35.aarch64 keyutils-libs-1.6.1-3.fc35.aarch64 sqlite-libs-3.36.0-4.fc36.aarch64 zlib-1.2.11-30.fc35.aarch64 redhat-rpm-config-207-1.fc36.noarch unzip-6.0-56.fc36.aarch64 ncurses-base-6.2-8.20210508.fc35.noarch libnghttp2-1.46.0-1.fc36.aarch64 openldap-2.4.59-4.fc36.aarch64 libzstd-1.5.1-6.fc36.aarch64 libsmartcols-2.37.2-1.fc36.aarch64 ocaml-srpm-macros-6-5.fc35.noarch libverto-0.3.2-2.fc35.aarch64 glibc-common-2.34.9000-36.fc36.aarch64 grep-3.7-1.fc36.aarch64 ca-certificates-2021.2.52-2.fc36.noarch libfdisk-2.37.2-1.fc36.aarch64 authselect-1.3.0-5.fc36.aarch64 lz4-libs-1.9.3-3.fc35.aarch64 zstd-1.5.1-6.fc36.aarch64 xz-5.2.5-7.fc35.aarch64 python-srpm-macros-3.10-14.fc36.noarch cracklib-2.9.6-27.fc36.aarch64 util-linux-2.37.2-1.fc36.aarch64 lua-libs-5.4.3-2.fc35.aarch64 libnsl2-2.0.0-2.fc36.aarch64 diffutils-3.8-1.fc35.aarch64 elfutils-default-yama-scope-0.186-1.fc36.noarch openblas-srpm-macros-2-10.fc35.noarch fedora-release-36-0.12.noarch rpm-build-libs-4.17.0-1.fc36.1.aarch64 systemd-rpm-macros-250.2-1.fc36.noarch libgpg-error-1.43-1.fc36.aarch64 filesystem-3.16-1.fc36.aarch64 libargon2-20171227-7.fc35.aarch64 glibc-gconv-extra-2.34.9000-36.fc36.aarch64 fedora-gpg-keys-36-0.3.noarch libtasn1-4.18.0-1.fc36.aarch64 libssh-0.9.6-2.fc36.aarch64 debugedit-5.0-2.fc35.aarch64 nim-srpm-macros-3-5.fc35.noarch qt5-srpm-macros-5.15.2-3.fc35.noarch fedora-repos-36-0.3.noarch coreutils-9.0-2.fc36.aarch64 glibc-minimal-langpack-2.34.9000-36.fc36.aarch64 pkgconf-m4-1.8.0-1.fc35.noarch fedora-release-identity-basic-36-0.12.noarch libmount-2.37.2-1.fc36.aarch64 bash-5.1.8-3.fc36.aarch64 binutils-2.37-22.fc36.aarch64 systemd-pam-250.2-1.fc36.aarch64 crypto-policies-20211115-1.git1b1c04c.fc36.noarch rpm-4.17.0-1.fc36.1.aarch64 ed-1.14.2-11.fc35.aarch64 libpwquality-1.4.4-6.fc36.aarch64 findutils-4.8.0-4.fc35.aarch64 cryptsetup-libs-2.4.2-1.fc36.aarch64 libtirpc-1.3.2-1.rc1.fc36.aarch64 libacl-2.3.1-2.fc35.aarch64 libxcrypt-4.4.27-1.fc36.aarch64 tzdata-2021e-1.fc36.noarch libdb-5.3.28-50.fc36.aarch64 xxhash-libs-0.8.1-1.fc36.aarch64 rpmautospec-rpm-macros-0.2.5-1.fc35.noarch libsigsegv-2.14-1.fc36.aarch64 binutils-gold-2.37-22.fc36.aarch64 gpg-pubkey-9867c58f-601c49ca gmp-6.2.1-1.fc36.aarch64 lua-srpm-macros-1-5.fc35.noarch rpm-libs-4.17.0-1.fc36.1.aarch64 dbus-broker-29-4.fc36.aarch64 fedora-release-common-36-0.12.noarch libcurl-7.81.0-1.fc36.aarch64 file-5.41-3.fc36.aarch64 libxml2-2.9.12-6.fc35.aarch64 device-mapper-libs-1.02.175-6.fc35.aarch64 sed-4.8-8.fc35.aarch64 libcap-ng-0.8.2-8.fc36.aarch64 libutempter-1.2.1-5.fc35.aarch64 cpio-2.13-11.fc36.aarch64 perl-srpm-macros-1-42.fc35.noarch fedora-repos-rawhide-36-0.3.noarch publicsuffix-list-dafsa-20210518-3.fc36.noarch fonts-srpm-macros-2.0.5-6.fc35.noarch systemd-250.2-1.fc36.aarch64 alternatives-1.19-1.fc35.aarch64 libcom_err-1.46.5-1.fc36.aarch64 pcre-8.45-1.fc36.aarch64 util-linux-core-2.37.2-1.fc36.aarch64 expat-2.4.1-2.fc35.aarch64 setup-2.13.9.1-2.fc35.noarch pcre2-syntax-10.39-1.fc36.noarch gpg-pubkey-38ab71f4-60242b08 libpsl-0.21.1-4.fc35.aarch64 libidn2-2.3.2-3.fc36.aarch64 p11-kit-trust-0.23.22-5.fc36.aarch64 libuuid-2.37.2-1.fc36.aarch64 file-libs-5.41-3.fc36.aarch64 readline-8.1-3.fc35.aarch64 info-6.8-2.fc35.aarch64 json-c-0.15-2.fc35.aarch64 pam-1.5.2-9.fc36.aarch64 libsemanage-3.3-1.fc36.aarch64 elfutils-debuginfod-client-0.186-1.fc36.aarch64 gnat-srpm-macros-4-14.fc35.noarch krb5-libs-1.19.2-4.fc36.aarch64 cyrus-sasl-lib-2.1.27-16.fc36.aarch64 libffi-3.4.2-6.fc36.aarch64 zip-3.0-31.fc35.aarch64 libsepol-3.3-2.fc36.aarch64 dbus-1.13.20-2.fc36.aarch64 libunistring-0.9.10-14.fc35.aarch64 tar-1.34-2.fc35.aarch64 Start: buildsrpm Start: rpmbuild -bs sh: line 1: /usr/bin/perl: No such file or directory Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1636329600 Wrote: /builddir/build/SRPMS/libsbml-5.19.0-9.fc36.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1641986745.557547/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-aarch64-1641986745.557547/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-aarch64-1641986745.557547/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-bpk5atgn/libsbml/libsbml.spec) Config(child) 2 minutes 16 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/libsbml-5.19.0-9.fc36.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1641986745.557547 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 2.15 starting (python version = 3.9.7, NVR = mock-2.15-1.fc34)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/libsbml-5.19.0-9.fc36.src.rpm) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1641986745.557547/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1641986745.557547/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.15 INFO: Mock Version: 2.15 Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1641986745.557547/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 2.15 INFO: Mock Version: 2.15 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 24 kB/s | 3.3 kB 00:00 fedora 28 kB/s | 8.8 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for libsbml-5.19.0-9.fc36.src.rpm Start: build setup for libsbml-5.19.0-9.fc36.src.rpm sh: line 1: /usr/bin/perl: No such file or directory Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1636329600 Wrote: /builddir/build/SRPMS/libsbml-5.19.0-9.fc36.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 24 kB/s | 3.3 kB 00:00 fedora 62 kB/s | 8.8 kB 00:00 Dependencies resolved. ================================================================================================== Package Arch Version Repo Size ================================================================================================== Installing: R-core-devel aarch64 4.1.2-1.fc36 fedora 88 k R-devel aarch64 4.1.2-1.fc36 fedora 9.2 k bzip2-devel aarch64 1.0.8-10.fc36 fedora 214 k check-devel aarch64 0.15.2-5.fc36 fedora 34 k cmake aarch64 3.22.1-5.fc36 fedora 5.8 M expat-devel aarch64 2.4.1-2.fc35 fedora 53 k hostname aarch64 3.23-5.fc35 fedora 27 k libxml2-devel aarch64 2.9.12-6.fc35 fedora 861 k minizip-devel aarch64 3.0.2-6.fc36 copr_base 27 k perl-ExtUtils-Embed noarch 1.35-482.fc36 fedora 25 k perl-ExtUtils-MakeMaker noarch 2:7.64-1.fc36 fedora 289 k perl-Test noarch 1.31-482.fc36 fedora 36 k perl-Test-Simple noarch 3:1.302188-1.fc36 fedora 525 k perl-devel aarch64 4:5.34.0-482.fc36 fedora 679 k perl-generators noarch 1.13-4.fc35 fedora 16 k python3-devel aarch64 3.10.1-2.fc36 fedora 207 k ruby-devel aarch64 3.0.3-155.fc36 fedora 270 k swig aarch64 4.0.2-11.fc36 fedora 1.4 M texlive-collection-latexrecommended noarch 9:svn57862-48.fc36 fedora 14 k zlib-devel aarch64 1.2.11-30.fc35 fedora 44 k Installing dependencies: R-core aarch64 4.1.2-1.fc36 fedora 60 M R-java-devel aarch64 4.1.2-1.fc36 fedora 9.9 k R-rpm-macros noarch 1.2.1-3.fc35 fedora 11 k adobe-mappings-cmap noarch 20190730-2.fc36 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20190730-2.fc36 fedora 115 k adobe-mappings-pdf noarch 20180407-9.fc35 fedora 637 k alsa-lib aarch64 1.2.6.1-3.fc36 fedora 485 k annobin-docs noarch 10.44-3.fc36 fedora 87 k annobin-plugin-gcc aarch64 10.44-3.fc36 fedora 811 k avahi-libs aarch64 0.8-14.fc35 fedora 67 k biber noarch 2.16-4.fc35 fedora 299 k brotli aarch64 1.0.9-6.fc35 fedora 313 k brotli-devel aarch64 1.0.9-6.fc35 fedora 32 k cairo aarch64 1.17.4-4.fc35 fedora 647 k check aarch64 0.15.2-5.fc36 fedora 86 k cmake-data noarch 3.22.1-5.fc36 fedora 1.6 M cmake-filesystem aarch64 3.22.1-5.fc36 fedora 18 k cmake-rpm-macros noarch 3.22.1-5.fc36 fedora 17 k copy-jdk-configs noarch 4.0-2.fc35 fedora 27 k cpp aarch64 11.2.1-7.fc36 fedora 9.7 M crypto-policies-scripts noarch 20211115-1.git1b1c04c.fc36 fedora 81 k cups-libs aarch64 1:2.4.0-1.fc36 fedora 264 k dbus-libs aarch64 1:1.13.20-2.fc36 fedora 155 k dejavu-sans-fonts noarch 2.37-17.fc35 fedora 1.3 M desktop-file-utils aarch64 0.26-4.fc35 fedora 71 k emacs-filesystem noarch 1:27.2-9.fc35 fedora 9.0 k flexiblas aarch64 3.0.4-6.fc35 fedora 31 k flexiblas-devel aarch64 3.0.4-6.fc35 fedora 99 k flexiblas-netlib aarch64 3.0.4-6.fc35 fedora 2.5 M flexiblas-netlib64 aarch64 3.0.4-6.fc35 fedora 2.4 M flexiblas-openblas-openmp aarch64 3.0.4-6.fc35 fedora 16 k flexiblas-openblas-openmp64 aarch64 3.0.4-6.fc35 fedora 16 k fontconfig aarch64 2.13.94-3.fc35 fedora 277 k fontconfig-devel aarch64 2.13.94-3.fc35 fedora 129 k fonts-filesystem noarch 1:2.0.5-6.fc35 fedora 8.9 k freetype aarch64 2.11.1-1.fc36 fedora 394 k freetype-devel aarch64 2.11.1-1.fc36 fedora 847 k fribidi aarch64 1.0.11-1.fc36 fedora 52 k gc aarch64 8.0.6-1.fc36 fedora 102 k gcc aarch64 11.2.1-7.fc36 fedora 29 M gcc-c++ aarch64 11.2.1-7.fc36 fedora 12 M gcc-gfortran aarch64 11.2.1-7.fc36 fedora 12 M gettext aarch64 0.21-9.fc36 fedora 1.1 M gettext-libs aarch64 0.21-9.fc36 fedora 288 k ghostscript aarch64 9.55.0-2.fc36 fedora 38 k ghostscript-tools-fonts aarch64 9.55.0-2.fc36 fedora 13 k ghostscript-tools-printing aarch64 9.55.0-2.fc36 fedora 13 k giflib aarch64 5.2.1-8.fc35 fedora 48 k glib2 aarch64 2.71.0-1.fc36 fedora 2.6 M glib2-devel aarch64 2.71.0-1.fc36 fedora 480 k glibc-devel aarch64 2.34.9000-36.fc36 fedora 571 k gnutls aarch64 3.7.2-2.fc35 fedora 1.0 M google-droid-sans-fonts noarch 20200215-10.fc35 fedora 2.7 M graphite2 aarch64 1.3.14-8.fc35 fedora 91 k graphite2-devel aarch64 1.3.14-8.fc35 fedora 21 k groff-base aarch64 1.22.4-8.fc35 fedora 1.0 M guile22 aarch64 2.2.7-4.fc36 fedora 6.4 M harfbuzz aarch64 3.2.0-1.fc36 fedora 709 k harfbuzz-devel aarch64 3.2.0-1.fc36 fedora 338 k harfbuzz-icu aarch64 3.2.0-1.fc36 fedora 15 k java-11-openjdk aarch64 1:11.0.14.0.1-0.1.ea.fc36 fedora 254 k java-11-openjdk-devel aarch64 1:11.0.14.0.1-0.1.ea.fc36 fedora 3.3 M java-11-openjdk-headless aarch64 1:11.0.14.0.1-0.1.ea.fc36 fedora 37 M javapackages-filesystem noarch 6.0.0-4.fc36 fedora 12 k jbig2dec-libs aarch64 0.19-5.fc35 fedora 71 k jbigkit-libs aarch64 2.1-22.fc35 fedora 52 k jsoncpp aarch64 1.9.5-1.fc36 fedora 88 k kernel-headers aarch64 5.16.0-1.fc36 fedora 1.3 M langpacks-core-font-en noarch 3.0-16.fc36 fedora 9.2 k lcms2 aarch64 2.12-2.fc35 fedora 166 k less aarch64 590-2.fc36 fedora 160 k libICE aarch64 1.0.10-7.fc35 fedora 69 k libRmath aarch64 4.1.2-1.fc36 fedora 108 k libSM aarch64 1.2.3-9.fc35 fedora 41 k libX11 aarch64 1.7.3.1-1.fc36 fedora 639 k libX11-common noarch 1.7.3.1-1.fc36 fedora 152 k libX11-devel aarch64 1.7.3.1-1.fc36 fedora 939 k libX11-xcb aarch64 1.7.3.1-1.fc36 fedora 12 k libXau aarch64 1.0.9-7.fc35 fedora 30 k libXau-devel aarch64 1.0.9-7.fc35 fedora 13 k libXaw aarch64 1.0.14-1.fc36 fedora 199 k libXcomposite aarch64 0.4.5-6.fc35 fedora 23 k libXext aarch64 1.3.4-7.fc35 fedora 38 k libXft aarch64 2.3.4-1.fc36 fedora 61 k libXft-devel aarch64 2.3.4-1.fc36 fedora 18 k libXi aarch64 1.8-1.fc36 fedora 38 k libXmu aarch64 1.1.3-7.fc35 fedora 73 k libXpm aarch64 3.5.13-6.fc35 fedora 57 k libXrender aarch64 0.9.10-15.fc35 fedora 26 k libXrender-devel aarch64 0.9.10-15.fc35 fedora 16 k libXt aarch64 1.2.1-1.fc36 fedora 174 k libXtst aarch64 1.2.3-15.fc35 fedora 21 k libasan aarch64 11.2.1-7.fc36 fedora 417 k libatomic aarch64 11.2.1-7.fc36 fedora 56 k libblkid-devel aarch64 2.37.2-1.fc36 fedora 18 k libdatrie aarch64 0.2.13-2.fc35 fedora 32 k libevent aarch64 2.1.12-5.fc36 fedora 254 k libffi-devel aarch64 3.4.2-6.fc36 fedora 28 k libffi3.1 aarch64 3.1-32.fc36 fedora 30 k libfontenc aarch64 1.1.4-2.fc36 fedora 31 k libgfortran aarch64 11.2.1-7.fc36 fedora 441 k libgs aarch64 9.55.0-2.fc36 fedora 3.4 M libicu aarch64 69.1-2.fc35 fedora 9.7 M libicu-devel aarch64 69.1-2.fc35 fedora 838 k libijs aarch64 0.35-14.fc35 fedora 29 k libjpeg-turbo aarch64 2.1.2-1.fc36 fedora 171 k libmount-devel aarch64 2.37.2-1.fc36 fedora 19 k libmpc aarch64 1.2.1-3.fc35 fedora 63 k libpaper aarch64 1.1.28-3.fc35 fedora 41 k libpng aarch64 2:1.6.37-11.fc35 fedora 115 k libpng-devel aarch64 2:1.6.37-11.fc35 fedora 291 k libselinux-devel aarch64 3.3-2.fc36 fedora 113 k libsepol-devel aarch64 3.3-2.fc36 fedora 40 k libstdc++-devel aarch64 11.2.1-7.fc36 fedora 2.2 M libthai aarch64 0.1.29-1.fc36 fedora 211 k libtiff aarch64 4.3.0-2.fc35 fedora 188 k libtool-ltdl aarch64 2.4.6-45.fc36 fedora 36 k libubsan aarch64 11.2.1-7.fc36 fedora 200 k libuv aarch64 1:1.43.0-2.fc36 fedora 148 k libwebp aarch64 1.2.1-3.fc36 fedora 240 k libxcb aarch64 1.13.1-8.fc35 fedora 227 k libxcb-devel aarch64 1.13.1-8.fc35 fedora 1.0 M libxcrypt-devel aarch64 4.4.27-1.fc36 fedora 29 k libxslt aarch64 1.1.34-6.fc36 fedora 239 k libyaml aarch64 0.2.5-6.fc35 fedora 59 k lksctp-tools aarch64 1.0.18-11.fc35 fedora 90 k lua aarch64 5.4.3-2.fc35 fedora 186 k lua-posix aarch64 35.0-4.fc35 fedora 130 k mailcap noarch 2.1.53-2.fc35 fedora 33 k make aarch64 1:4.3-6.fc35 fedora 530 k minizip aarch64 3.0.2-6.fc36 copr_base 70 k mkfontscale aarch64 1.2.1-3.fc35 fedora 31 k mpdecimal aarch64 2.5.1-2.fc35 fedora 101 k ncurses aarch64 6.2-8.20210508.fc35 fedora 400 k nettle aarch64 3.7.3-2.fc35 fedora 404 k nspr aarch64 4.32.0-4.fc36 fedora 135 k nss aarch64 3.73.0-1.fc36 fedora 681 k nss-softokn aarch64 3.73.0-1.fc36 fedora 378 k nss-softokn-freebl aarch64 3.73.0-1.fc36 fedora 307 k nss-sysinit aarch64 3.73.0-1.fc36 fedora 21 k nss-util aarch64 3.73.0-1.fc36 fedora 87 k openblas aarch64 0.3.19-2.fc36 fedora 34 k openblas-openmp aarch64 0.3.19-2.fc36 fedora 3.4 M openblas-openmp64 aarch64 0.3.19-2.fc36 fedora 3.3 M openjpeg2 aarch64 2.4.0-4.fc35 fedora 161 k pango aarch64 1.50.3-1.fc36 fedora 331 k pcre-cpp aarch64 8.45-1.fc36 fedora 25 k pcre-devel aarch64 8.45-1.fc36 fedora 470 k pcre-utf16 aarch64 8.45-1.fc36 fedora 167 k pcre-utf32 aarch64 8.45-1.fc36 fedora 159 k pcre2-devel aarch64 10.39-1.fc36 fedora 475 k pcre2-utf16 aarch64 10.39-1.fc36 fedora 192 k pcre2-utf32 aarch64 10.39-1.fc36 fedora 184 k perl-Authen-SASL noarch 2.16-25.fc35 fedora 52 k perl-AutoLoader noarch 5.74-482.fc36 fedora 29 k perl-AutoSplit noarch 5.74-482.fc36 fedora 29 k perl-B aarch64 1.82-482.fc36 fedora 189 k perl-B-Hooks-EndOfScope noarch 0.25-1.fc36 fedora 38 k perl-Benchmark noarch 1.23-482.fc36 fedora 35 k perl-Business-ISBN noarch 3.007-1.fc36 fedora 32 k perl-Business-ISBN-Data noarch 20210112.006-3.fc35 fedora 36 k perl-Business-ISMN noarch 1.202-3.fc35 fedora 25 k perl-Business-ISSN noarch 1.004-6.fc35 fedora 18 k perl-Carp noarch 1.52-478.fc35 fedora 29 k perl-Class-Accessor noarch 0.51-13.fc35 fedora 29 k perl-Class-Data-Inheritable noarch 0.09-1.fc35 fedora 13 k perl-Class-Inspector noarch 1.36-8.fc35 fedora 31 k perl-Class-Method-Modifiers noarch 2.13-9.fc35 fedora 44 k perl-Class-Singleton noarch 1.6-4.fc35 fedora 27 k perl-Class-Struct noarch 0.66-482.fc36 fedora 30 k perl-Clone aarch64 0.45-6.fc35 fedora 22 k perl-Compress-Raw-Bzip2 aarch64 2.101-479.fc35 fedora 34 k perl-Compress-Raw-Zlib aarch64 2.101-479.fc35 fedora 59 k perl-Convert-ASN1 noarch 0.33-1.fc36 fedora 59 k perl-Data-Compare noarch 1.27-7.fc35 fedora 35 k perl-Data-Dump noarch 1.25-2.fc35 fedora 33 k perl-Data-Dumper aarch64 2.183-2.fc35 fedora 55 k perl-Data-OptList noarch 0.112-2.fc35 fedora 27 k perl-Data-Uniqid noarch 0.12-26.fc35 fedora 12 k perl-Date-ISO8601 noarch 0.005-13.fc35 fedora 20 k perl-Date-Manip noarch 6.86-1.fc36 fedora 1.0 M perl-DateTime aarch64 2:1.55-1.fc36 fedora 129 k perl-DateTime-Calendar-Julian noarch 0.106-1.fc36 fedora 23 k perl-DateTime-Format-Builder noarch 0.8300-5.fc35 fedora 85 k perl-DateTime-Format-Strptime noarch 1:1.79-3.fc35 fedora 42 k perl-DateTime-Locale noarch 1.33-1.fc36 fedora 2.9 M perl-DateTime-TimeZone noarch 2.51-1.fc36 fedora 358 k perl-DateTime-TimeZone-SystemV noarch 0.010-14.fc35 fedora 23 k perl-DateTime-TimeZone-Tzfile noarch 0.011-14.fc35 fedora 20 k perl-Devel-CallChecker aarch64 0.008-14.fc35 fedora 23 k perl-Devel-Caller aarch64 2.06-26.fc35 fedora 19 k perl-Devel-GlobalDestruction noarch 0.14-16.fc35 fedora 17 k perl-Devel-LexAlias aarch64 0.05-27.fc35 fedora 16 k perl-Devel-PPPort aarch64 3.63-2.fc35 fedora 212 k perl-Devel-StackTrace noarch 1:2.04-10.fc35 fedora 31 k perl-Digest noarch 1.20-1.fc36 fedora 25 k perl-Digest-HMAC noarch 1.04-3.fc35 fedora 23 k perl-Digest-MD5 aarch64 2.58-478.fc35 fedora 36 k perl-Digest-SHA aarch64 1:6.02-479.fc35 fedora 61 k perl-Dist-CheckConflicts noarch 0.11-23.fc35 fedora 24 k perl-DynaLoader aarch64 1.50-482.fc36 fedora 34 k perl-DynaLoader-Functions noarch 0.003-13.fc35 fedora 19 k perl-Email-Date-Format noarch 1.005-20.fc35 fedora 18 k perl-Encode aarch64 4:3.16-483.fc36 fedora 1.7 M perl-Encode-Locale noarch 1.05-21.fc35 fedora 19 k perl-Errno aarch64 1.33-482.fc36 fedora 23 k perl-Eval-Closure noarch 0.14-16.fc35 fedora 24 k perl-Exception-Class noarch 1.45-3.fc35 fedora 44 k perl-Exporter noarch 5.76-479.fc35 fedora 31 k perl-ExtUtils-Command noarch 2:7.64-1.fc36 fedora 14 k perl-ExtUtils-Constant noarch 0.25-482.fc36 fedora 54 k perl-ExtUtils-Install noarch 2.20-478.fc35 fedora 44 k perl-ExtUtils-MM-Utils noarch 2:7.64-1.fc36 fedora 12 k perl-ExtUtils-Manifest noarch 1:1.73-478.fc35 fedora 34 k perl-ExtUtils-ParseXS noarch 1:3.44-1.fc36 fedora 182 k perl-Fcntl aarch64 1.14-482.fc36 fedora 28 k perl-Fedora-VSP noarch 0.001-24.fc35 fedora 23 k perl-File-Basename noarch 2.85-482.fc36 fedora 25 k perl-File-Compare noarch 1.100.600-482.fc36 fedora 21 k perl-File-Copy noarch 2.35-482.fc36 fedora 28 k perl-File-Find noarch 1.39-482.fc36 fedora 33 k perl-File-Find-Rule noarch 0.34-19.fc35 fedora 33 k perl-File-Listing noarch 6.14-4.fc35 fedora 25 k perl-File-Path noarch 2.18-478.fc35 fedora 35 k perl-File-ShareDir noarch 1.118-4.fc35 fedora 30 k perl-File-Slurper noarch 0.013-1.fc36 fedora 21 k perl-File-Temp noarch 1:0.231.100-478.fc35 fedora 59 k perl-File-stat noarch 1.09-482.fc36 fedora 25 k perl-FileHandle noarch 2.03-482.fc36 fedora 23 k perl-Filter aarch64 2:1.60-5.fc35 fedora 81 k perl-FindBin noarch 1.52-482.fc36 fedora 22 k perl-GSSAPI aarch64 0.28-37.fc36 fedora 60 k perl-Getopt-Long noarch 1:2.52-478.fc35 fedora 60 k perl-Getopt-Std noarch 1.13-482.fc36 fedora 23 k perl-HTML-Parser aarch64 3.76-3.fc35 fedora 118 k perl-HTML-Tagset noarch 3.20-48.fc35 fedora 18 k perl-HTTP-Cookies noarch 6.10-4.fc35 fedora 38 k perl-HTTP-Date noarch 6.05-7.fc35 fedora 24 k perl-HTTP-Message noarch 6.36-1.fc36 fedora 97 k perl-HTTP-Negotiate noarch 6.01-30.fc35 fedora 20 k perl-HTTP-Tiny noarch 0.080-1.fc36 fedora 55 k perl-Hash-Util-FieldHash aarch64 1.21-482.fc36 fedora 46 k perl-I18N-LangTags noarch 0.45-482.fc36 fedora 62 k perl-I18N-Langinfo aarch64 0.19-482.fc36 fedora 30 k perl-IO aarch64 1.46-482.fc36 fedora 95 k perl-IO-Compress noarch 2.102-479.fc35 fedora 257 k perl-IO-HTML noarch 1.004-4.fc35 fedora 28 k perl-IO-Socket-IP noarch 0.41-479.fc35 fedora 42 k perl-IO-Socket-SSL noarch 2.074-1.fc36 fedora 218 k perl-IO-String noarch 1.08-43.fc35 fedora 17 k perl-IPC-Cmd noarch 2:1.04-479.fc35 fedora 40 k perl-IPC-Open3 noarch 1.21-482.fc36 fedora 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fedora 20 k texlive-parskip noarch 9:svn58358-48.fc36 fedora 19 k texlive-pdfcolmk noarch 9:svn52912-48.fc36 fedora 20 k texlive-pdfescape noarch 9:svn53082-48.fc36 fedora 355 k texlive-pdflscape noarch 9:svn53047-48.fc36 fedora 310 k texlive-pdfmanagement-testphase noarch 9:svn59194-48.fc36 fedora 6.4 M texlive-pdfpages noarch 9:svn58212-48.fc36 fedora 34 k texlive-pdftex aarch64 9:20210325-43.fc36 fedora 2.0 M texlive-pdftexcmds noarch 9:svn55777-48.fc36 fedora 393 k texlive-pgf noarch 9:svn57240-48.fc36 fedora 823 k texlive-picture noarch 9:svn54867-48.fc36 fedora 314 k texlive-placeins noarch 9:svn19848.2.2-48.fc36 fedora 15 k texlive-plain noarch 9:svn57963-48.fc36 fedora 45 k texlive-polyglossia noarch 9:svn58869-48.fc36 fedora 170 k texlive-psfrag noarch 9:svn15878.3.04-48.fc36 fedora 17 k texlive-pslatex noarch 9:svn57434-48.fc36 fedora 24 k texlive-psnfss noarch 9:svn54694-48.fc36 fedora 43 k texlive-pspicture noarch 9:svn15878.0-48.fc36 fedora 18 k texlive-pst-3d noarch 9:svn17257.1.10-48.fc36 fedora 20 k texlive-pst-coil noarch 9:svn37377.1.07-48.fc36 fedora 20 k texlive-pst-eps noarch 9:svn15878.1.0-48.fc36 fedora 19 k texlive-pst-fill noarch 9:svn15878.1.01-48.fc36 fedora 20 k texlive-pst-grad noarch 9:svn15878.1.06-48.fc36 fedora 20 k texlive-pst-math noarch 9:svn49425-48.fc36 fedora 22 k texlive-pst-node noarch 9:svn54687-48.fc36 fedora 42 k texlive-pst-ovl noarch 9:svn54963-48.fc36 fedora 18 k texlive-pst-plot noarch 9:svn54080-48.fc36 fedora 39 k texlive-pst-text noarch 9:svn49542-48.fc36 fedora 21 k texlive-pst-tools noarch 9:svn54518-48.fc36 fedora 23 k texlive-pst-tree noarch 9:svn43272-48.fc36 fedora 23 k texlive-pstricks noarch 9:svn58371-48.fc36 fedora 100 k texlive-pstricks-add noarch 9:svn53763-48.fc36 fedora 38 k texlive-pxfonts noarch 9:svn15878.0-48.fc36 fedora 497 k texlive-qstest noarch 9:svn15878.0-48.fc36 fedora 21 k texlive-ragged2e noarch 9:svn57638-48.fc36 fedora 666 k texlive-rcs noarch 9:svn15878.0-48.fc36 fedora 30 k texlive-realscripts noarch 9:svn56594-48.fc36 fedora 21 k texlive-refcount noarch 9:svn53164-48.fc36 fedora 337 k texlive-rerunfilecheck noarch 9:svn54841-48.fc36 fedora 326 k texlive-rsfs noarch 9:svn15878.0-48.fc36 fedora 71 k texlive-sansmath noarch 9:svn17997.1.1-48.fc36 fedora 16 k texlive-sansmathaccent noarch 9:svn53628-48.fc36 fedora 34 k texlive-sauerj noarch 9:svn15878.0-48.fc36 fedora 22 k texlive-section noarch 9:svn20180.0-48.fc36 fedora 25 k texlive-seminar noarch 9:svn34011.1.62-48.fc36 fedora 49 k texlive-sepnum noarch 9:svn20186.2.0-48.fc36 fedora 19 k texlive-setspace noarch 9:svn24881.6.7a-48.fc36 fedora 20 k texlive-showexpl noarch 9:svn57414-48.fc36 fedora 20 k texlive-soul noarch 9:svn56495-48.fc36 fedora 22 k texlive-stringenc noarch 9:svn52982-48.fc36 fedora 696 k texlive-subfig noarch 9:svn15878.1.3-48.fc36 fedora 23 k texlive-symbol noarch 9:svn31835.0-48.fc36 fedora 56 k texlive-tex aarch64 9:20210325-43.fc36 fedora 203 k texlive-tex-gyre noarch 9:svn48058-48.fc36 fedora 7.8 M texlive-tex-gyre-math noarch 9:svn41264-48.fc36 fedora 1.4 M texlive-tex-ini-files noarch 9:svn40533-48.fc36 fedora 17 k texlive-texlive-common-doc noarch 9:svn54176-48.fc36 fedora 107 k texlive-texlive-en noarch 9:20210325-43.fc36 fedora 1.9 M texlive-texlive-msg-translations noarch 9:svn59096-48.fc36 fedora 159 k texlive-texlive-scripts noarch 9:20210325-43.fc36 fedora 107 k texlive-texlive-scripts-extra noarch 9:20210325-43.fc36 fedora 56 k texlive-texlive.infra noarch 9:20210325-43.fc36 fedora 283 k texlive-textcase noarch 9:svn52092-48.fc36 fedora 17 k texlive-thumbpdf noarch 9:20210325-43.fc36 fedora 42 k texlive-times noarch 9:svn35058.0-48.fc36 fedora 344 k texlive-tipa noarch 9:svn29349.1.3-48.fc36 fedora 2.8 M texlive-titlesec noarch 9:svn52413-48.fc36 fedora 36 k texlive-tools noarch 9:svn56514-48.fc36 fedora 66 k texlive-translator noarch 9:svn56052-48.fc36 fedora 272 k texlive-transparent noarch 9:svn52981-48.fc36 fedora 278 k texlive-txfonts noarch 9:svn15878.0-48.fc36 fedora 769 k texlive-typehtml noarch 9:svn17134.0-48.fc36 fedora 23 k texlive-ucharcat noarch 9:svn38907-48.fc36 fedora 17 k texlive-ucs noarch 9:svn35853.2.2-48.fc36 fedora 348 k texlive-underscore noarch 9:svn18261.0-48.fc36 fedora 20 k texlive-unicode-data noarch 9:svn56768-48.fc36 fedora 357 k texlive-unicode-math noarch 9:svn56594-48.fc36 fedora 65 k texlive-uniquecounter noarch 9:svn53162-48.fc36 fedora 302 k texlive-url noarch 9:svn32528.3.4-48.fc36 fedora 21 k texlive-utopia noarch 9:svn15878.0-48.fc36 fedora 231 k texlive-varwidth noarch 9:svn24104.0.92-48.fc36 fedora 20 k texlive-wasy noarch 9:svn53533-48.fc36 fedora 41 k texlive-wasy-type1 noarch 9:svn53534-48.fc36 fedora 270 k texlive-wasysym noarch 9:svn54080-48.fc36 fedora 20 k texlive-xcolor noarch 9:svn41044-48.fc36 fedora 34 k texlive-xdvi aarch64 9:20210325-43.fc36 fedora 348 k texlive-xetex aarch64 9:20210325-43.fc36 fedora 1.2 M texlive-xetexconfig noarch 9:svn45845-48.fc36 fedora 13 k texlive-xifthen noarch 9:svn38929-48.fc36 fedora 18 k texlive-xkeyval noarch 9:svn57006-48.fc36 fedora 29 k texlive-xltxtra noarch 9:svn56594-48.fc36 fedora 19 k texlive-xpatch noarch 9:svn54563-48.fc36 fedora 20 k texlive-xstring noarch 9:svn49946-48.fc36 fedora 27 k texlive-xunicode noarch 9:svn30466.0.981-48.fc36 fedora 46 k texlive-zapfchan noarch 9:svn31835.0-48.fc36 fedora 106 k texlive-zapfding noarch 9:svn31835.0-48.fc36 fedora 66 k texlive-zref noarch 9:svn56611-48.fc36 fedora 668 k tk aarch64 1:8.6.12-1.fc36 fedora 1.6 M tk-devel aarch64 1:8.6.12-1.fc36 fedora 487 k tre aarch64 0.8.0-34.20140228gitc2f5d13.fc35 fedora 38 k tre-common noarch 0.8.0-34.20140228gitc2f5d13.fc35 fedora 31 k tre-devel aarch64 0.8.0-34.20140228gitc2f5d13.fc35 fedora 12 k ttmkfdir aarch64 3.0.9-64.fc35 fedora 50 k tzdata-java noarch 2021e-1.fc36 fedora 155 k urw-base35-bookman-fonts noarch 20200910-9.fc36 fedora 846 k urw-base35-c059-fonts noarch 20200910-9.fc36 fedora 874 k urw-base35-d050000l-fonts noarch 20200910-9.fc36 fedora 76 k urw-base35-fonts noarch 20200910-9.fc36 fedora 10 k urw-base35-fonts-common noarch 20200910-9.fc36 fedora 21 k urw-base35-gothic-fonts noarch 20200910-9.fc36 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-9.fc36 fedora 795 k urw-base35-nimbus-roman-fonts noarch 20200910-9.fc36 fedora 856 k urw-base35-nimbus-sans-fonts noarch 20200910-9.fc36 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-9.fc36 fedora 973 k urw-base35-standard-symbols-ps-fonts noarch 20200910-9.fc36 fedora 42 k urw-base35-z003-fonts noarch 20200910-9.fc36 fedora 276 k vim-data noarch 2:8.2.4051-1.fc36 fedora 28 k vim-filesystem noarch 2:8.2.4051-1.fc36 fedora 22 k vim-minimal aarch64 2:8.2.4051-1.fc36 fedora 680 k xdg-utils noarch 1.1.3-10.fc35 fedora 73 k xml-common noarch 0.6.3-57.fc35 fedora 31 k xorg-x11-fonts-Type1 noarch 7.5-32.fc35 fedora 500 k xorg-x11-proto-devel noarch 2021.5-1.fc36 fedora 262 k xz-devel aarch64 5.2.5-7.fc35 fedora 52 k zziplib aarch64 0.13.71-5.fc36 fedora 86 k Transaction Summary ================================================================================================== Install 752 Packages Total download size: 492 M Installed size: 1.3 G Downloading Packages: (1/752): minizip-3.0.2-6.fc36.aarch64.rpm 187 kB/s | 70 kB 00:00 (2/752): minizip-devel-3.0.2-6.fc36.aarch64.rpm 71 kB/s | 27 kB 00:00 (3/752): R-devel-4.1.2-1.fc36.aarch64.rpm 3.1 MB/s | 9.2 kB 00:00 (4/752): R-core-devel-4.1.2-1.fc36.aarch64.rpm 16 MB/s | 88 kB 00:00 (5/752): R-java-devel-4.1.2-1.fc36.aarch64.rpm 3.1 MB/s | 9.9 kB 00:00 (6/752): R-rpm-macros-1.2.1-3.fc35.noarch.rpm 3.1 MB/s | 11 kB 00:00 (7/752): adobe-mappings-cmap-deprecated-2019073 13 MB/s | 115 kB 00:00 (8/752): adobe-mappings-pdf-20180407-9.fc35.noa 23 MB/s | 637 kB 00:00 (9/752): adobe-mappings-cmap-20190730-2.fc36.no 33 MB/s | 2.1 MB 00:00 (10/752): alsa-lib-1.2.6.1-3.fc36.aarch64.rpm 13 MB/s | 485 kB 00:00 (11/752): annobin-docs-10.44-3.fc36.noarch.rpm 3.8 MB/s | 87 kB 00:00 (12/752): annobin-plugin-gcc-10.44-3.fc36.aarch 28 MB/s | 811 kB 00:00 (13/752): avahi-libs-0.8-14.fc35.aarch64.rpm 2.9 MB/s | 67 kB 00:00 (14/752): biber-2.16-4.fc35.noarch.rpm 9.7 MB/s | 299 kB 00:00 (15/752): brotli-1.0.9-6.fc35.aarch64.rpm 11 MB/s | 313 kB 00:00 (16/752): brotli-devel-1.0.9-6.fc35.aarch64.rpm 1.1 MB/s | 32 kB 00:00 (17/752): bzip2-devel-1.0.8-10.fc36.aarch64.rpm 7.5 MB/s | 214 kB 00:00 (18/752): cairo-1.17.4-4.fc35.aarch64.rpm 19 MB/s | 647 kB 00:00 (19/752): check-0.15.2-5.fc36.aarch64.rpm 3.4 MB/s | 86 kB 00:00 (20/752): check-devel-0.15.2-5.fc36.aarch64.rpm 1.4 MB/s | 34 kB 00:00 (21/752): cmake-data-3.22.1-5.fc36.noarch.rpm 26 MB/s | 1.6 MB 00:00 (22/752): cmake-3.22.1-5.fc36.aarch64.rpm 52 MB/s | 5.8 MB 00:00 (23/752): cmake-filesystem-3.22.1-5.fc36.aarch6 347 kB/s | 18 kB 00:00 (24/752): cmake-rpm-macros-3.22.1-5.fc36.noarch 742 kB/s | 17 kB 00:00 (25/752): copy-jdk-configs-4.0-2.fc35.noarch.rp 1.2 MB/s | 27 kB 00:00 (26/752): R-core-4.1.2-1.fc36.aarch64.rpm 65 MB/s | 60 MB 00:00 (27/752): crypto-policies-scripts-20211115-1.gi 591 kB/s | 81 kB 00:00 (28/752): dbus-libs-1.13.20-2.fc36.aarch64.rpm 4.2 MB/s | 155 kB 00:00 (29/752): cups-libs-2.4.0-1.fc36.aarch64.rpm 5.9 MB/s | 264 kB 00:00 (30/752): desktop-file-utils-0.26-4.fc35.aarch6 3.2 MB/s | 71 kB 00:00 (31/752): cpp-11.2.1-7.fc36.aarch64.rpm 38 MB/s | 9.7 MB 00:00 (32/752): emacs-filesystem-27.2-9.fc35.noarch.r 251 kB/s | 9.0 kB 00:00 (33/752): dejavu-sans-fonts-2.37-17.fc35.noarch 19 MB/s | 1.3 MB 00:00 (34/752): expat-devel-2.4.1-2.fc35.aarch64.rpm 7.4 MB/s | 53 kB 00:00 (35/752): flexiblas-3.0.4-6.fc35.aarch64.rpm 6.2 MB/s | 31 kB 00:00 (36/752): flexiblas-devel-3.0.4-6.fc35.aarch64. 18 MB/s | 99 kB 00:00 (37/752): flexiblas-openblas-openmp-3.0.4-6.fc3 6.1 MB/s | 16 kB 00:00 (38/752): flexiblas-openblas-openmp64-3.0.4-6.f 4.5 MB/s | 16 kB 00:00 (39/752): fontconfig-2.13.94-3.fc35.aarch64.rpm 35 MB/s | 277 kB 00:00 (40/752): fontconfig-devel-2.13.94-3.fc35.aarch 8.8 MB/s | 129 kB 00:00 (41/752): fonts-filesystem-2.0.5-6.fc35.noarch. 2.1 MB/s | 8.9 kB 00:00 (42/752): flexiblas-netlib64-3.0.4-6.fc35.aarch 39 MB/s | 2.4 MB 00:00 (43/752): freetype-2.11.1-1.fc36.aarch64.rpm 16 MB/s | 394 kB 00:00 (44/752): flexiblas-netlib-3.0.4-6.fc35.aarch64 32 MB/s | 2.5 MB 00:00 (45/752): freetype-devel-2.11.1-1.fc36.aarch64. 47 MB/s | 847 kB 00:00 (46/752): fribidi-1.0.11-1.fc36.aarch64.rpm 5.7 MB/s | 52 kB 00:00 (47/752): gc-8.0.6-1.fc36.aarch64.rpm 22 MB/s | 102 kB 00:00 (48/752): gcc-gfortran-11.2.1-7.fc36.aarch64.rp 52 MB/s | 12 MB 00:00 (49/752): gcc-c++-11.2.1-7.fc36.aarch64.rpm 47 MB/s | 12 MB 00:00 (50/752): gettext-0.21-9.fc36.aarch64.rpm 18 MB/s | 1.1 MB 00:00 (51/752): gettext-libs-0.21-9.fc36.aarch64.rpm 6.9 MB/s | 288 kB 00:00 (52/752): gcc-11.2.1-7.fc36.aarch64.rpm 81 MB/s | 29 MB 00:00 (53/752): ghostscript-9.55.0-2.fc36.aarch64.rpm 544 kB/s | 38 kB 00:00 (54/752): ghostscript-tools-fonts-9.55.0-2.fc36 218 kB/s | 13 kB 00:00 (55/752): ghostscript-tools-printing-9.55.0-2.f 3.0 MB/s | 13 kB 00:00 (56/752): giflib-5.2.1-8.fc35.aarch64.rpm 6.8 MB/s | 48 kB 00:00 (57/752): glib2-devel-2.71.0-1.fc36.aarch64.rpm 40 MB/s | 480 kB 00:00 (58/752): glibc-devel-2.34.9000-36.fc36.aarch64 33 MB/s | 571 kB 00:00 (59/752): gnutls-3.7.2-2.fc35.aarch64.rpm 24 MB/s | 1.0 MB 00:00 (60/752): glib2-2.71.0-1.fc36.aarch64.rpm 31 MB/s | 2.6 MB 00:00 (61/752): graphite2-1.3.14-8.fc35.aarch64.rpm 3.7 MB/s | 91 kB 00:00 (62/752): google-droid-sans-fonts-20200215-10.f 42 MB/s | 2.7 MB 00:00 (63/752): groff-base-1.22.4-8.fc35.aarch64.rpm 79 MB/s | 1.0 MB 00:00 (64/752): graphite2-devel-1.3.14-8.fc35.aarch64 995 kB/s | 21 kB 00:00 (65/752): guile22-2.2.7-4.fc36.aarch64.rpm 134 MB/s | 6.4 MB 00:00 (66/752): harfbuzz-devel-3.2.0-1.fc36.aarch64.r 9.4 MB/s | 338 kB 00:00 (67/752): harfbuzz-3.2.0-1.fc36.aarch64.rpm 15 MB/s | 709 kB 00:00 (68/752): harfbuzz-icu-3.2.0-1.fc36.aarch64.rpm 2.5 MB/s | 15 kB 00:00 (69/752): hostname-3.23-5.fc35.aarch64.rpm 7.2 MB/s | 27 kB 00:00 (70/752): java-11-openjdk-11.0.14.0.1-0.1.ea.fc 18 MB/s | 254 kB 00:00 (71/752): javapackages-filesystem-6.0.0-4.fc36. 1.7 MB/s | 12 kB 00:00 (72/752): jbig2dec-libs-0.19-5.fc35.aarch64.rpm 5.8 MB/s | 71 kB 00:00 (73/752): jbigkit-libs-2.1-22.fc35.aarch64.rpm 5.2 MB/s | 52 kB 00:00 (74/752): java-11-openjdk-devel-11.0.14.0.1-0.1 57 MB/s | 3.3 MB 00:00 (75/752): jsoncpp-1.9.5-1.fc36.aarch64.rpm 7.0 MB/s | 88 kB 00:00 (76/752): kernel-headers-5.16.0-1.fc36.aarch64. 73 MB/s | 1.3 MB 00:00 (77/752): langpacks-core-font-en-3.0-16.fc36.no 619 kB/s | 9.2 kB 00:00 (78/752): lcms2-2.12-2.fc35.aarch64.rpm 15 MB/s | 166 kB 00:00 (79/752): less-590-2.fc36.aarch64.rpm 17 MB/s | 160 kB 00:00 (80/752): libICE-1.0.10-7.fc35.aarch64.rpm 9.6 MB/s | 69 kB 00:00 (81/752): libRmath-4.1.2-1.fc36.aarch64.rpm 18 MB/s | 108 kB 00:00 (82/752): libSM-1.2.3-9.fc35.aarch64.rpm 4.6 MB/s | 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perl-Authen-SASL-2.16-25.fc35.noarch 163/752 Verifying : perl-AutoLoader-5.74-482.fc36.noarch 164/752 Verifying : perl-AutoSplit-5.74-482.fc36.noarch 165/752 Verifying : perl-B-1.82-482.fc36.aarch64 166/752 Verifying : perl-B-Hooks-EndOfScope-0.25-1.fc36.noarch 167/752 Verifying : perl-Benchmark-1.23-482.fc36.noarch 168/752 Verifying : perl-Business-ISBN-3.007-1.fc36.noarch 169/752 Verifying : perl-Business-ISBN-Data-20210112.006-3.fc35.noar 170/752 Verifying : perl-Business-ISMN-1.202-3.fc35.noarch 171/752 Verifying : perl-Business-ISSN-1.004-6.fc35.noarch 172/752 Verifying : perl-Carp-1.52-478.fc35.noarch 173/752 Verifying : perl-Class-Accessor-0.51-13.fc35.noarch 174/752 Verifying : perl-Class-Data-Inheritable-0.09-1.fc35.noarch 175/752 Verifying : perl-Class-Inspector-1.36-8.fc35.noarch 176/752 Verifying : perl-Class-Method-Modifiers-2.13-9.fc35.noarch 177/752 Verifying : perl-Class-Singleton-1.6-4.fc35.noarch 178/752 Verifying : perl-Class-Struct-0.66-482.fc36.noarch 179/752 Verifying : perl-Clone-0.45-6.fc35.aarch64 180/752 Verifying : perl-Compress-Raw-Bzip2-2.101-479.fc35.aarch64 181/752 Verifying : perl-Compress-Raw-Zlib-2.101-479.fc35.aarch64 182/752 Verifying : perl-Convert-ASN1-0.33-1.fc36.noarch 183/752 Verifying : perl-Data-Compare-1.27-7.fc35.noarch 184/752 Verifying : perl-Data-Dump-1.25-2.fc35.noarch 185/752 Verifying : perl-Data-Dumper-2.183-2.fc35.aarch64 186/752 Verifying : perl-Data-OptList-0.112-2.fc35.noarch 187/752 Verifying : perl-Data-Uniqid-0.12-26.fc35.noarch 188/752 Verifying : perl-Date-ISO8601-0.005-13.fc35.noarch 189/752 Verifying : perl-Date-Manip-6.86-1.fc36.noarch 190/752 Verifying : perl-DateTime-2:1.55-1.fc36.aarch64 191/752 Verifying : perl-DateTime-Calendar-Julian-0.106-1.fc36.noarc 192/752 Verifying : perl-DateTime-Format-Builder-0.8300-5.fc35.noarc 193/752 Verifying : perl-DateTime-Format-Strptime-1:1.79-3.fc35.noar 194/752 Verifying : perl-DateTime-Locale-1.33-1.fc36.noarch 195/752 Verifying : perl-DateTime-TimeZone-2.51-1.fc36.noarch 196/752 Verifying : perl-DateTime-TimeZone-SystemV-0.010-14.fc35.noa 197/752 Verifying : perl-DateTime-TimeZone-Tzfile-0.011-14.fc35.noar 198/752 Verifying : perl-Devel-CallChecker-0.008-14.fc35.aarch64 199/752 Verifying : perl-Devel-Caller-2.06-26.fc35.aarch64 200/752 Verifying : perl-Devel-GlobalDestruction-0.14-16.fc35.noarch 201/752 Verifying : perl-Devel-LexAlias-0.05-27.fc35.aarch64 202/752 Verifying : perl-Devel-PPPort-3.63-2.fc35.aarch64 203/752 Verifying : perl-Devel-StackTrace-1:2.04-10.fc35.noarch 204/752 Verifying : perl-Digest-1.20-1.fc36.noarch 205/752 Verifying : perl-Digest-HMAC-1.04-3.fc35.noarch 206/752 Verifying : perl-Digest-MD5-2.58-478.fc35.aarch64 207/752 Verifying : perl-Digest-SHA-1:6.02-479.fc35.aarch64 208/752 Verifying : perl-Dist-CheckConflicts-0.11-23.fc35.noarch 209/752 Verifying : perl-DynaLoader-1.50-482.fc36.aarch64 210/752 Verifying : perl-DynaLoader-Functions-0.003-13.fc35.noarch 211/752 Verifying : perl-Email-Date-Format-1.005-20.fc35.noarch 212/752 Verifying : perl-Encode-4:3.16-483.fc36.aarch64 213/752 Verifying : perl-Encode-Locale-1.05-21.fc35.noarch 214/752 Verifying : perl-Errno-1.33-482.fc36.aarch64 215/752 Verifying : perl-Eval-Closure-0.14-16.fc35.noarch 216/752 Verifying : perl-Exception-Class-1.45-3.fc35.noarch 217/752 Verifying : perl-Exporter-5.76-479.fc35.noarch 218/752 Verifying : perl-ExtUtils-Command-2:7.64-1.fc36.noarch 219/752 Verifying : perl-ExtUtils-Constant-0.25-482.fc36.noarch 220/752 Verifying : perl-ExtUtils-Embed-1.35-482.fc36.noarch 221/752 Verifying : perl-ExtUtils-Install-2.20-478.fc35.noarch 222/752 Verifying : perl-ExtUtils-MM-Utils-2:7.64-1.fc36.noarch 223/752 Verifying : perl-ExtUtils-MakeMaker-2:7.64-1.fc36.noarch 224/752 Verifying : perl-ExtUtils-Manifest-1:1.73-478.fc35.noarch 225/752 Verifying : perl-ExtUtils-ParseXS-1:3.44-1.fc36.noarch 226/752 Verifying : perl-Fcntl-1.14-482.fc36.aarch64 227/752 Verifying : perl-Fedora-VSP-0.001-24.fc35.noarch 228/752 Verifying : perl-File-Basename-2.85-482.fc36.noarch 229/752 Verifying : perl-File-Compare-1.100.600-482.fc36.noarch 230/752 Verifying : perl-File-Copy-2.35-482.fc36.noarch 231/752 Verifying : perl-File-Find-1.39-482.fc36.noarch 232/752 Verifying : perl-File-Find-Rule-0.34-19.fc35.noarch 233/752 Verifying : perl-File-Listing-6.14-4.fc35.noarch 234/752 Verifying : perl-File-Path-2.18-478.fc35.noarch 235/752 Verifying : perl-File-ShareDir-1.118-4.fc35.noarch 236/752 Verifying : perl-File-Slurper-0.013-1.fc36.noarch 237/752 Verifying : perl-File-Temp-1:0.231.100-478.fc35.noarch 238/752 Verifying : perl-File-stat-1.09-482.fc36.noarch 239/752 Verifying : perl-FileHandle-2.03-482.fc36.noarch 240/752 Verifying : perl-Filter-2:1.60-5.fc35.aarch64 241/752 Verifying : perl-FindBin-1.52-482.fc36.noarch 242/752 Verifying : perl-GSSAPI-0.28-37.fc36.aarch64 243/752 Verifying : perl-Getopt-Long-1:2.52-478.fc35.noarch 244/752 Verifying : perl-Getopt-Std-1.13-482.fc36.noarch 245/752 Verifying : perl-HTML-Parser-3.76-3.fc35.aarch64 246/752 Verifying : perl-HTML-Tagset-3.20-48.fc35.noarch 247/752 Verifying : perl-HTTP-Cookies-6.10-4.fc35.noarch 248/752 Verifying : perl-HTTP-Date-6.05-7.fc35.noarch 249/752 Verifying : perl-HTTP-Message-6.36-1.fc36.noarch 250/752 Verifying : perl-HTTP-Negotiate-6.01-30.fc35.noarch 251/752 Verifying : perl-HTTP-Tiny-0.080-1.fc36.noarch 252/752 Verifying : perl-Hash-Util-FieldHash-1.21-482.fc36.aarch64 253/752 Verifying : perl-I18N-LangTags-0.45-482.fc36.noarch 254/752 Verifying : perl-I18N-Langinfo-0.19-482.fc36.aarch64 255/752 Verifying : perl-IO-1.46-482.fc36.aarch64 256/752 Verifying : perl-IO-Compress-2.102-479.fc35.noarch 257/752 Verifying : perl-IO-HTML-1.004-4.fc35.noarch 258/752 Verifying : perl-IO-Socket-IP-0.41-479.fc35.noarch 259/752 Verifying : perl-IO-Socket-SSL-2.074-1.fc36.noarch 260/752 Verifying : perl-IO-String-1.08-43.fc35.noarch 261/752 Verifying : perl-IPC-Cmd-2:1.04-479.fc35.noarch 262/752 Verifying : perl-IPC-Open3-1.21-482.fc36.noarch 263/752 Verifying : perl-IPC-Run3-0.048-23.fc35.noarch 264/752 Verifying : perl-IPC-SysV-2.09-479.fc35.aarch64 265/752 Verifying : perl-Importer-0.026-4.fc35.noarch 266/752 Verifying : perl-JSON-4.04-1.fc36.noarch 267/752 Verifying : perl-JSON-PP-1:4.07-1.fc36.noarch 268/752 Verifying : perl-LDAP-1:0.68-5.fc35.noarch 269/752 Verifying : perl-LWP-MediaTypes-6.04-9.fc35.noarch 270/752 Verifying : perl-LWP-Protocol-https-6.10-4.fc35.noarch 271/752 Verifying : perl-Lingua-Translit-0.28-13.fc35.noarch 272/752 Verifying : perl-List-AllUtils-0.19-4.fc35.noarch 273/752 Verifying : perl-List-SomeUtils-0.58-7.fc35.noarch 274/752 Verifying : perl-List-UtilsBy-0.11-13.fc35.noarch 275/752 Verifying : perl-Locale-Maketext-1.29-479.fc35.noarch 276/752 Verifying : perl-Locale-Maketext-Simple-1:0.21-482.fc36.noar 277/752 Verifying : perl-Log-Dispatch-2.70-5.fc35.noarch 278/752 Verifying : perl-Log-Dispatch-FileRotate-1.38-2.fc35.noarch 279/752 Verifying : perl-Log-Log4perl-1.54-3.fc35.noarch 280/752 Verifying : perl-MIME-Base64-3.16-478.fc35.aarch64 281/752 Verifying : perl-MIME-Charset-1.012.2-15.fc35.noarch 282/752 Verifying : perl-MIME-Lite-3.033-2.fc35.noarch 283/752 Verifying : perl-MIME-Types-2.22-1.fc36.noarch 284/752 Verifying : perl-MRO-Compat-0.15-1.fc36.noarch 285/752 Verifying : perl-Mail-Sender-1:0.903-16.fc35.noarch 286/752 Verifying : perl-Mail-Sendmail-0.80-13.fc35.noarch 287/752 Verifying : perl-MailTools-2.21-9.fc35.noarch 288/752 Verifying : perl-Math-BigInt-1:1.9998.29-1.fc36.noarch 289/752 Verifying : perl-Math-Complex-1.59-482.fc36.noarch 290/752 Verifying : perl-Module-CoreList-1:5.20211220-1.fc36.noarch 291/752 Verifying : perl-Module-Implementation-0.09-31.fc35.noarch 292/752 Verifying : perl-Module-Load-1:0.36-478.fc35.noarch 293/752 Verifying : perl-Module-Load-Conditional-0.74-478.fc35.noarc 294/752 Verifying : perl-Module-Metadata-1.000037-478.fc35.noarch 295/752 Verifying : perl-Module-Runtime-0.016-13.fc35.noarch 296/752 Verifying : perl-Mozilla-CA-20211001-1.fc36.noarch 297/752 Verifying : perl-NTLM-1.09-30.fc35.noarch 298/752 Verifying : perl-Net-HTTP-6.21-3.fc35.noarch 299/752 Verifying : perl-Net-SMTP-SSL-1.04-16.fc35.noarch 300/752 Verifying : perl-Net-SSLeay-1.90-7.fc36.aarch64 301/752 Verifying : perl-Number-Compare-0.03-30.fc35.noarch 302/752 Verifying : perl-Object-HashBase-0.009-7.fc35.noarch 303/752 Verifying : perl-Opcode-1.50-482.fc36.aarch64 304/752 Verifying : perl-POSIX-1.97-482.fc36.aarch64 305/752 Verifying : perl-Package-Generator-1.106-23.fc35.noarch 306/752 Verifying : perl-Package-Stash-0.39-4.fc35.noarch 307/752 Verifying : perl-Package-Stash-XS-0.29-11.fc35.aarch64 308/752 Verifying : perl-PadWalker-2.5-4.fc35.aarch64 309/752 Verifying : perl-Params-Check-1:0.38-478.fc35.noarch 310/752 Verifying : perl-Params-Classify-0.015-14.fc35.aarch64 311/752 Verifying : perl-Params-Util-1.102-5.fc35.aarch64 312/752 Verifying : perl-Params-Validate-1.30-4.fc35.aarch64 313/752 Verifying : perl-Params-ValidationCompiler-0.30-13.fc35.noar 314/752 Verifying : perl-Parse-RecDescent-1.967015-15.fc35.noarch 315/752 Verifying : perl-PathTools-3.80-478.fc35.aarch64 316/752 Verifying : perl-Pod-Escapes-1:1.07-478.fc35.noarch 317/752 Verifying : perl-Pod-Html-1.27-482.fc36.noarch 318/752 Verifying : perl-Pod-Perldoc-3.28.01-479.fc35.noarch 319/752 Verifying : perl-Pod-Simple-1:3.43-2.fc35.noarch 320/752 Verifying : perl-Pod-Usage-4:2.01-478.fc35.noarch 321/752 Verifying : perl-Ref-Util-0.204-12.fc35.noarch 322/752 Verifying : perl-Ref-Util-XS-0.117-13.fc35.aarch64 323/752 Verifying : perl-Regexp-Common-2017060201-16.fc35.noarch 324/752 Verifying : perl-Role-Tiny-2.002004-4.fc35.noarch 325/752 Verifying : perl-Safe-2.43-482.fc36.noarch 326/752 Verifying : perl-Scalar-List-Utils-5:1.60-462.fc36.aarch64 327/752 Verifying : perl-SelectSaver-1.02-482.fc36.noarch 328/752 Verifying : perl-Socket-4:2.032-2.fc35.aarch64 329/752 Verifying : perl-Sort-Key-1.33-22.fc35.aarch64 330/752 Verifying : perl-Specio-0.47-4.fc35.noarch 331/752 Verifying : perl-Storable-1:3.25-1.fc36.aarch64 332/752 Verifying : perl-Sub-Exporter-0.988-2.fc35.noarch 333/752 Verifying : perl-Sub-Exporter-Progressive-0.001013-16.fc35.n 334/752 Verifying : perl-Sub-Identify-0.14-17.fc35.aarch64 335/752 Verifying : perl-Sub-Install-0.928-29.fc35.noarch 336/752 Verifying : perl-Symbol-1.09-482.fc36.noarch 337/752 Verifying : perl-Sys-Hostname-1.23-482.fc36.aarch64 338/752 Verifying : perl-Sys-Syslog-0.36-479.fc35.aarch64 339/752 Verifying : perl-Term-ANSIColor-5.01-479.fc35.noarch 340/752 Verifying : perl-Term-Cap-1.17-478.fc35.noarch 341/752 Verifying : perl-Term-Table-0.016-1.fc36.noarch 342/752 Verifying : perl-Test-1.31-482.fc36.noarch 343/752 Verifying : perl-Test-Harness-1:3.43-479.fc35.noarch 344/752 Verifying : perl-Test-Simple-3:1.302188-1.fc36.noarch 345/752 Verifying : perl-Text-Balanced-2.04-478.fc35.noarch 346/752 Verifying : perl-Text-BibTeX-0.88-9.fc35.aarch64 347/752 Verifying : perl-Text-CSV-2.01-2.fc35.noarch 348/752 Verifying : perl-Text-Glob-0.11-15.fc35.noarch 349/752 Verifying : perl-Text-ParseWords-3.30-478.fc35.noarch 350/752 Verifying : perl-Text-Roman-3.5-20.fc35.noarch 351/752 Verifying : perl-Text-Soundex-3.05-20.fc35.aarch64 352/752 Verifying : perl-Text-Tabs+Wrap-2021.0814-1.fc36.noarch 353/752 Verifying : perl-Text-Unidecode-1.30-16.fc35.noarch 354/752 Verifying : perl-Tie-4.6-482.fc36.noarch 355/752 Verifying : perl-Tie-Cycle-1.227-1.fc36.noarch 356/752 Verifying : perl-Time-HiRes-4:1.9767-479.fc35.aarch64 357/752 Verifying : perl-Time-Local-2:1.300-478.fc35.noarch 358/752 Verifying : perl-TimeDate-1:2.33-6.fc35.noarch 359/752 Verifying : perl-Try-Tiny-0.31-1.fc36.noarch 360/752 Verifying : perl-URI-5.10-1.fc36.noarch 361/752 Verifying : perl-Unicode-Collate-1.31-1.fc36.aarch64 362/752 Verifying : perl-Unicode-EastAsianWidth-12.0-7.fc35.noarch 363/752 Verifying : perl-Unicode-LineBreak-2019.001-11.fc35.aarch64 364/752 Verifying : perl-Unicode-Normalize-1.28-478.fc35.aarch64 365/752 Verifying : perl-Unicode-UCD-0.75-482.fc36.noarch 366/752 Verifying : perl-Variable-Magic-0.62-14.fc35.aarch64 367/752 Verifying : perl-WWW-RobotRules-6.02-30.fc35.noarch 368/752 Verifying : perl-XML-LibXML-1:2.0207-4.fc35.aarch64 369/752 Verifying : perl-XML-LibXML-Simple-1.01-7.fc35.noarch 370/752 Verifying : perl-XML-LibXSLT-1.99-7.fc35.aarch64 371/752 Verifying : perl-XML-NamespaceSupport-1.12-15.fc35.noarch 372/752 Verifying : perl-XML-Parser-2.46-9.fc35.aarch64 373/752 Verifying : perl-XML-SAX-1.02-8.fc35.noarch 374/752 Verifying : perl-XML-SAX-Base-1.09-15.fc35.noarch 375/752 Verifying : perl-XML-Writer-0.900-5.fc35.noarch 376/752 Verifying : perl-XML-XPath-1.44-11.fc35.noarch 377/752 Verifying : perl-XString-0.005-4.fc35.aarch64 378/752 Verifying : perl-autovivification-0.18-14.fc35.aarch64 379/752 Verifying : perl-base-2.27-482.fc36.noarch 380/752 Verifying : perl-constant-1.33-479.fc35.noarch 381/752 Verifying : perl-deprecate-0.04-482.fc36.noarch 382/752 Verifying : perl-devel-4:5.34.0-482.fc36.aarch64 383/752 Verifying : perl-encoding-4:3.00-483.fc36.aarch64 384/752 Verifying : perl-generators-1.13-4.fc35.noarch 385/752 Verifying : perl-if-0.60.900-482.fc36.noarch 386/752 Verifying : perl-interpreter-4:5.34.0-482.fc36.aarch64 387/752 Verifying : perl-lib-0.65-482.fc36.aarch64 388/752 Verifying : perl-libintl-perl-1.32-4.fc35.aarch64 389/752 Verifying : perl-libnet-3.13-479.fc35.noarch 390/752 Verifying : perl-libs-4:5.34.0-482.fc36.aarch64 391/752 Verifying : perl-libwww-perl-6.60-1.fc36.noarch 392/752 Verifying : perl-locale-1.10-482.fc36.noarch 393/752 Verifying : perl-macros-4:5.34.0-482.fc36.noarch 394/752 Verifying : perl-meta-notation-5.34.0-482.fc36.noarch 395/752 Verifying : perl-mro-1.25-482.fc36.aarch64 396/752 Verifying : perl-namespace-autoclean-0.29-9.fc35.noarch 397/752 Verifying : perl-namespace-clean-0.27-18.fc35.noarch 398/752 Verifying : perl-open-1.12-482.fc36.noarch 399/752 Verifying : perl-overload-1.33-482.fc36.noarch 400/752 Verifying : perl-overloading-0.02-482.fc36.noarch 401/752 Verifying : perl-parent-1:0.238-478.fc35.noarch 402/752 Verifying : perl-podlators-1:4.14-478.fc35.noarch 403/752 Verifying : perl-sigtrap-1.09-482.fc36.noarch 404/752 Verifying : perl-subs-1.04-482.fc36.noarch 405/752 Verifying : perl-vars-1.05-482.fc36.noarch 406/752 Verifying : perl-version-8:0.99.29-4.fc35.aarch64 407/752 Verifying : perltidy-20211029-1.fc36.noarch 408/752 Verifying : pixman-0.40.0-4.fc35.aarch64 409/752 Verifying : poppler-21.08.0-1.fc35.aarch64 410/752 Verifying : poppler-data-0.4.11-1.fc36.noarch 411/752 Verifying : pyproject-rpm-macros-0-52.fc36.noarch 412/752 Verifying : python-pip-wheel-21.3.1-1.fc36.noarch 413/752 Verifying : python-rpm-macros-3.10-14.fc36.noarch 414/752 Verifying : python-setuptools-wheel-59.6.0-1.fc36.noarch 415/752 Verifying : python3-3.10.1-2.fc36.aarch64 416/752 Verifying : python3-devel-3.10.1-2.fc36.aarch64 417/752 Verifying : python3-libs-3.10.1-2.fc36.aarch64 418/752 Verifying : python3-packaging-21.3-1.fc36.noarch 419/752 Verifying : python3-pyparsing-2.4.7-9.fc35.noarch 420/752 Verifying : python3-rpm-generators-12-11.fc36.noarch 421/752 Verifying : python3-rpm-macros-3.10-14.fc36.noarch 422/752 Verifying : qpdf-10.5.0-2.fc36.aarch64 423/752 Verifying : qpdf-libs-10.5.0-2.fc36.aarch64 424/752 Verifying : rhash-1.4.2-1.fc36.aarch64 425/752 Verifying : ruby-3.0.3-155.fc36.aarch64 426/752 Verifying : ruby-devel-3.0.3-155.fc36.aarch64 427/752 Verifying : ruby-libs-3.0.3-155.fc36.aarch64 428/752 Verifying : rubygem-psych-3.3.2-155.fc36.aarch64 429/752 Verifying : rubygems-3.2.32-155.fc36.noarch 430/752 Verifying : rubypick-1.1.1-15.fc35.noarch 431/752 Verifying : sombok-2.4.0-15.fc35.aarch64 432/752 Verifying : subunit-1.4.0-9.fc35.aarch64 433/752 Verifying : subunit-devel-1.4.0-9.fc35.aarch64 434/752 Verifying : swig-4.0.2-11.fc36.aarch64 435/752 Verifying : sysprof-capture-devel-3.42.1-1.fc36.aarch64 436/752 Verifying : systemtap-sdt-devel-4.7~pre16395042gefae8a3d-2.f 437/752 Verifying : tcl-1:8.6.12-1.fc36.aarch64 438/752 Verifying : tcl-devel-1:8.6.12-1.fc36.aarch64 439/752 Verifying : teckit-2.5.9-7.fc35.aarch64 440/752 Verifying : texinfo-6.8-2.fc35.aarch64 441/752 Verifying : texinfo-tex-6.8-2.fc35.aarch64 442/752 Verifying : texlive-ae-9:svn15878.1.4-48.fc36.noarch 443/752 Verifying : texlive-algorithms-9:svn42428-48.fc36.noarch 444/752 Verifying : texlive-alphalph-9:svn53087-48.fc36.noarch 445/752 Verifying : texlive-amscls-9:svn55378-48.fc36.noarch 446/752 Verifying : texlive-amsfonts-9:svn29208.3.04-48.fc36.noarch 447/752 Verifying : texlive-amsmath-9:svn56514-48.fc36.noarch 448/752 Verifying : texlive-anysize-9:svn15878.0-48.fc36.noarch 449/752 Verifying : texlive-atbegshi-9:svn53051-48.fc36.noarch 450/752 Verifying : texlive-attachfile-9:svn42099-48.fc36.noarch 451/752 Verifying : texlive-attachfile2-9:20210325-43.fc36.noarch 452/752 Verifying : texlive-atveryend-9:svn53108-48.fc36.noarch 453/752 Verifying : texlive-auto-pst-pdf-9:svn56596-48.fc36.noarch 454/752 Verifying : texlive-auxhook-9:svn53173-48.fc36.noarch 455/752 Verifying : texlive-avantgar-9:svn31835.0-48.fc36.noarch 456/752 Verifying : texlive-babel-english-9:svn44495-48.fc36.noarch 457/752 Verifying : texlive-babel-9:svn58999-48.fc36.noarch 458/752 Verifying : texlive-babelbib-9:svn57349-48.fc36.noarch 459/752 Verifying : texlive-base-9:20210325-43.fc36.aarch64 460/752 Verifying : texlive-beamer-9:svn58537-48.fc36.noarch 461/752 Verifying : texlive-bera-9:svn20031.0-48.fc36.noarch 462/752 Verifying : texlive-beton-9:svn15878.0-48.fc36.noarch 463/752 Verifying : texlive-biblatex-9:svn57272-48.fc36.noarch 464/752 Verifying : texlive-bibtex-9:20210325-43.fc36.aarch64 465/752 Verifying : texlive-bidi-9:svn55193-48.fc36.noarch 466/752 Verifying : texlive-bigintcalc-9:svn53172-48.fc36.noarch 467/752 Verifying : texlive-bitset-9:svn53837-48.fc36.noarch 468/752 Verifying : texlive-bookman-9:svn31835.0-48.fc36.noarch 469/752 Verifying : texlive-bookmark-9:svn56885-48.fc36.noarch 470/752 Verifying : texlive-booktabs-9:svn53402-48.fc36.noarch 471/752 Verifying : texlive-breakurl-9:svn29901.1.40-48.fc36.noarch 472/752 Verifying : texlive-breqn-9:svn56422-48.fc36.noarch 473/752 Verifying : texlive-caption-9:svn56771-48.fc36.noarch 474/752 Verifying : texlive-carlisle-9:svn56753-48.fc36.noarch 475/752 Verifying : texlive-catchfile-9:svn53084-48.fc36.noarch 476/752 Verifying : texlive-changepage-9:svn15878.1.0c-48.fc36.noarc 477/752 Verifying : texlive-charter-9:svn15878.0-48.fc36.noarch 478/752 Verifying : texlive-cite-9:svn36428.5.5-48.fc36.noarch 479/752 Verifying : texlive-cm-super-9:svn15878.0-48.fc36.noarch 480/752 Verifying : texlive-cm-9:svn57963-48.fc36.noarch 481/752 Verifying : 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620/752 Verifying : texlive-notoccite-9:svn18129.0-48.fc36.noarch 621/752 Verifying : texlive-ntgclass-9:svn56959-48.fc36.noarch 622/752 Verifying : texlive-oberdiek-9:20210325-43.fc36.noarch 623/752 Verifying : texlive-pagesel-9:svn56105-48.fc36.noarch 624/752 Verifying : texlive-palatino-9:svn31835.0-48.fc36.noarch 625/752 Verifying : texlive-paralist-9:svn43021-48.fc36.noarch 626/752 Verifying : texlive-parallel-9:svn15878.0-48.fc36.noarch 627/752 Verifying : texlive-parskip-9:svn58358-48.fc36.noarch 628/752 Verifying : texlive-pdfcolmk-9:svn52912-48.fc36.noarch 629/752 Verifying : texlive-pdfescape-9:svn53082-48.fc36.noarch 630/752 Verifying : texlive-pdflscape-9:svn53047-48.fc36.noarch 631/752 Verifying : texlive-pdfmanagement-testphase-9:svn59194-48.fc 632/752 Verifying : texlive-pdfpages-9:svn58212-48.fc36.noarch 633/752 Verifying : texlive-pdftex-9:20210325-43.fc36.aarch64 634/752 Verifying : texlive-pdftexcmds-9:svn55777-48.fc36.noarch 635/752 Verifying : 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vim-data-2:8.2.4051-1.fc36.noarch 743/752 Verifying : vim-filesystem-2:8.2.4051-1.fc36.noarch 744/752 Verifying : vim-minimal-2:8.2.4051-1.fc36.aarch64 745/752 Verifying : xdg-utils-1.1.3-10.fc35.noarch 746/752 Verifying : xml-common-0.6.3-57.fc35.noarch 747/752 Verifying : xorg-x11-fonts-Type1-7.5-32.fc35.noarch 748/752 Verifying : xorg-x11-proto-devel-2021.5-1.fc36.noarch 749/752 Verifying : xz-devel-5.2.5-7.fc35.aarch64 750/752 Verifying : zlib-devel-1.2.11-30.fc35.aarch64 751/752 Verifying : zziplib-0.13.71-5.fc36.aarch64 752/752 Installed: R-core-4.1.2-1.fc36.aarch64 R-core-devel-4.1.2-1.fc36.aarch64 R-devel-4.1.2-1.fc36.aarch64 R-java-devel-4.1.2-1.fc36.aarch64 R-rpm-macros-1.2.1-3.fc35.noarch adobe-mappings-cmap-20190730-2.fc36.noarch adobe-mappings-cmap-deprecated-20190730-2.fc36.noarch adobe-mappings-pdf-20180407-9.fc35.noarch alsa-lib-1.2.6.1-3.fc36.aarch64 annobin-docs-10.44-3.fc36.noarch annobin-plugin-gcc-10.44-3.fc36.aarch64 avahi-libs-0.8-14.fc35.aarch64 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texlive-rerunfilecheck-9:svn54841-48.fc36.noarch texlive-rsfs-9:svn15878.0-48.fc36.noarch texlive-sansmath-9:svn17997.1.1-48.fc36.noarch texlive-sansmathaccent-9:svn53628-48.fc36.noarch texlive-sauerj-9:svn15878.0-48.fc36.noarch texlive-section-9:svn20180.0-48.fc36.noarch texlive-seminar-9:svn34011.1.62-48.fc36.noarch texlive-sepnum-9:svn20186.2.0-48.fc36.noarch texlive-setspace-9:svn24881.6.7a-48.fc36.noarch texlive-showexpl-9:svn57414-48.fc36.noarch texlive-soul-9:svn56495-48.fc36.noarch texlive-stringenc-9:svn52982-48.fc36.noarch texlive-subfig-9:svn15878.1.3-48.fc36.noarch texlive-symbol-9:svn31835.0-48.fc36.noarch texlive-tex-9:20210325-43.fc36.aarch64 texlive-tex-gyre-9:svn48058-48.fc36.noarch texlive-tex-gyre-math-9:svn41264-48.fc36.noarch texlive-tex-ini-files-9:svn40533-48.fc36.noarch texlive-texlive-common-doc-9:svn54176-48.fc36.noarch texlive-texlive-en-9:20210325-43.fc36.noarch texlive-texlive-msg-translations-9:svn59096-48.fc36.noarch texlive-texlive-scripts-9:20210325-43.fc36.noarch texlive-texlive-scripts-extra-9:20210325-43.fc36.noarch texlive-texlive.infra-9:20210325-43.fc36.noarch texlive-textcase-9:svn52092-48.fc36.noarch texlive-thumbpdf-9:20210325-43.fc36.noarch texlive-times-9:svn35058.0-48.fc36.noarch texlive-tipa-9:svn29349.1.3-48.fc36.noarch texlive-titlesec-9:svn52413-48.fc36.noarch texlive-tools-9:svn56514-48.fc36.noarch texlive-translator-9:svn56052-48.fc36.noarch texlive-transparent-9:svn52981-48.fc36.noarch texlive-txfonts-9:svn15878.0-48.fc36.noarch texlive-typehtml-9:svn17134.0-48.fc36.noarch texlive-ucharcat-9:svn38907-48.fc36.noarch texlive-ucs-9:svn35853.2.2-48.fc36.noarch texlive-underscore-9:svn18261.0-48.fc36.noarch texlive-unicode-data-9:svn56768-48.fc36.noarch texlive-unicode-math-9:svn56594-48.fc36.noarch texlive-uniquecounter-9:svn53162-48.fc36.noarch texlive-url-9:svn32528.3.4-48.fc36.noarch texlive-utopia-9:svn15878.0-48.fc36.noarch texlive-varwidth-9:svn24104.0.92-48.fc36.noarch texlive-wasy-9:svn53533-48.fc36.noarch texlive-wasy-type1-9:svn53534-48.fc36.noarch texlive-wasysym-9:svn54080-48.fc36.noarch texlive-xcolor-9:svn41044-48.fc36.noarch texlive-xdvi-9:20210325-43.fc36.aarch64 texlive-xetex-9:20210325-43.fc36.aarch64 texlive-xetexconfig-9:svn45845-48.fc36.noarch texlive-xifthen-9:svn38929-48.fc36.noarch texlive-xkeyval-9:svn57006-48.fc36.noarch texlive-xltxtra-9:svn56594-48.fc36.noarch texlive-xpatch-9:svn54563-48.fc36.noarch texlive-xstring-9:svn49946-48.fc36.noarch texlive-xunicode-9:svn30466.0.981-48.fc36.noarch texlive-zapfchan-9:svn31835.0-48.fc36.noarch texlive-zapfding-9:svn31835.0-48.fc36.noarch texlive-zref-9:svn56611-48.fc36.noarch tk-1:8.6.12-1.fc36.aarch64 tk-devel-1:8.6.12-1.fc36.aarch64 tre-0.8.0-34.20140228gitc2f5d13.fc35.aarch64 tre-common-0.8.0-34.20140228gitc2f5d13.fc35.noarch tre-devel-0.8.0-34.20140228gitc2f5d13.fc35.aarch64 ttmkfdir-3.0.9-64.fc35.aarch64 tzdata-java-2021e-1.fc36.noarch urw-base35-bookman-fonts-20200910-9.fc36.noarch urw-base35-c059-fonts-20200910-9.fc36.noarch urw-base35-d050000l-fonts-20200910-9.fc36.noarch urw-base35-fonts-20200910-9.fc36.noarch urw-base35-fonts-common-20200910-9.fc36.noarch urw-base35-gothic-fonts-20200910-9.fc36.noarch urw-base35-nimbus-mono-ps-fonts-20200910-9.fc36.noarch urw-base35-nimbus-roman-fonts-20200910-9.fc36.noarch urw-base35-nimbus-sans-fonts-20200910-9.fc36.noarch urw-base35-p052-fonts-20200910-9.fc36.noarch urw-base35-standard-symbols-ps-fonts-20200910-9.fc36.noarch urw-base35-z003-fonts-20200910-9.fc36.noarch vim-data-2:8.2.4051-1.fc36.noarch vim-filesystem-2:8.2.4051-1.fc36.noarch vim-minimal-2:8.2.4051-1.fc36.aarch64 xdg-utils-1.1.3-10.fc35.noarch xml-common-0.6.3-57.fc35.noarch xorg-x11-fonts-Type1-7.5-32.fc35.noarch xorg-x11-proto-devel-2021.5-1.fc36.noarch xz-devel-5.2.5-7.fc35.aarch64 zlib-devel-1.2.11-30.fc35.aarch64 zziplib-0.13.71-5.fc36.aarch64 Complete! Finish: build setup for libsbml-5.19.0-9.fc36.src.rpm Start: rpmbuild libsbml-5.19.0-9.fc36.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1636329600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.mlBb0e + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libSBML-5.19.0-Source + /usr/bin/gzip -dc /builddir/build/SOURCES/libSBML-5.19.0-core-plus-packages-src.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd libSBML-5.19.0-Source + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/cat /builddir/build/SOURCES/libsbml-use-system-minizip-cmake.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/bin/cat /builddir/build/SOURCES/libsbml-fix_install_libpaths.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/bin/cat /builddir/build/SOURCES/time-clock.diff + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/bin/cat /builddir/build/SOURCES/lisbml-fix-jsfile-globs.diff + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/bin/cat /builddir/build/SOURCES/libsbml-drop-formatter-import.diff + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/bin/cat /builddir/build/SOURCES/b12b7f9372424f5271a838c95605d9946c7ea1fb.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + unzip -n /builddir/build/SOURCES/libSBML-5.19.0-render-src.zip Archive: /builddir/build/SOURCES/libSBML-5.19.0-render-src.zip + sed -r -i s/DOXYGEN_MAX_VERSION=1.8.11/DOXYGEN_MAX_VERSION=2.0.0/ configure + find . -type f -name '*.py' -exec pathfix.py -pn -i /usr/bin/python3 '{}' ';' ./src/bindings/python/libsbml.py: no change ./src/bindings/python/libsbml-doxygen.py: no change ./src/bindings/python/doc-converter/rewrite_pydoc.py: updating ./src/bindings/python/doc-converter/argparse.py: no change ./src/bindings/python/doc-converter/prettytable.py: updating ./src/bindings/python/test.py: updating ./src/bindings/python/test/sbml/TestWriteSBML.py: no change ./src/bindings/python/test/sbml/TestWriteL3SBML.py: no change ./src/bindings/python/test/sbml/TestUnit_newSetters.py: no change ./src/bindings/python/test/sbml/TestUnitKind.py: no change ./src/bindings/python/test/sbml/TestUnitDefinition_newSetters.py: no change ./src/bindings/python/test/sbml/TestUnitDefinition.py: no change ./src/bindings/python/test/sbml/TestUnit.py: no change ./src/bindings/python/test/sbml/TestTrigger.py: no change ./src/bindings/python/test/sbml/TestSyntaxChecker.py: no change ./src/bindings/python/test/sbml/TestStoichiometryMath.py: no change ./src/bindings/python/test/sbml/TestSpecies_newSetters.py: no change ./src/bindings/python/test/sbml/TestSpeciesType_newSetters.py: no change ./src/bindings/python/test/sbml/TestSpeciesType.py: no change ./src/bindings/python/test/sbml/TestSpeciesReference_newSetters.py: no change ./src/bindings/python/test/sbml/TestSpeciesReference.py: no change ./src/bindings/python/test/sbml/TestSpeciesConcentrationRule.py: no change ./src/bindings/python/test/sbml/TestSpecies.py: no change ./src/bindings/python/test/sbml/TestSBase_newSetters.py: no change ./src/bindings/python/test/sbml/TestSBase.py: no change ./src/bindings/python/test/sbml/TestSBMLParentObject.py: no change ./src/bindings/python/test/sbml/TestSBMLNamespaces.py: no change ./src/bindings/python/test/sbml/TestSBMLError.py: no change ./src/bindings/python/test/sbml/TestSBMLDocument.py: no change ./src/bindings/python/test/sbml/TestSBMLConvertStrict.py: no change ./src/bindings/python/test/sbml/TestSBMLConvert.py: no change ./src/bindings/python/test/sbml/TestSBMLConstructorException.py: no change ./src/bindings/python/test/sbml/TestRule_newSetters.py: no change ./src/bindings/python/test/sbml/TestRule.py: no change ./src/bindings/python/test/sbml/TestReadSBML.py: no change ./src/bindings/python/test/sbml/TestReadFromFile9.py: no change ./src/bindings/python/test/sbml/TestReadFromFile8.py: no change ./src/bindings/python/test/sbml/TestReadFromFile7.py: no change ./src/bindings/python/test/sbml/TestReadFromFile6.py: no change ./src/bindings/python/test/sbml/TestReadFromFile5.py: no change ./src/bindings/python/test/sbml/TestReadFromFile4.py: no change ./src/bindings/python/test/sbml/TestReadFromFile3.py: no change ./src/bindings/python/test/sbml/TestReadFromFile2.py: no change ./src/bindings/python/test/sbml/TestReadFromFile1.py: no change ./src/bindings/python/test/sbml/TestReaction_newSetters.py: no change ./src/bindings/python/test/sbml/TestReaction.py: no change ./src/bindings/python/test/sbml/TestRateRule.py: no change ./src/bindings/python/test/sbml/TestPriority.py: no change ./src/bindings/python/test/sbml/TestParameter_newSetters.py: no change ./src/bindings/python/test/sbml/TestParameterRule.py: no change ./src/bindings/python/test/sbml/TestParameter.py: no change ./src/bindings/python/test/sbml/TestModifierSpeciesReference.py: no change ./src/bindings/python/test/sbml/TestModel_newSetters.py: no change ./src/bindings/python/test/sbml/TestModel.py: no change ./src/bindings/python/test/sbml/TestListOf.py: no change ./src/bindings/python/test/sbml/TestL3Unit.py: no change ./src/bindings/python/test/sbml/TestL3Trigger.py: no change ./src/bindings/python/test/sbml/TestL3SpeciesReference.py: no change ./src/bindings/python/test/sbml/TestL3Species.py: no change ./src/bindings/python/test/sbml/TestL3Reaction.py: no change ./src/bindings/python/test/sbml/TestL3Parameter.py: no change ./src/bindings/python/test/sbml/TestL3Model.py: no change ./src/bindings/python/test/sbml/TestL3LocalParameter.py: no change ./src/bindings/python/test/sbml/TestL3KineticLaw.py: no change ./src/bindings/python/test/sbml/TestL3Event.py: no change ./src/bindings/python/test/sbml/TestL3Compartment.py: no change ./src/bindings/python/test/sbml/TestKineticLaw_newSetters.py: no change ./src/bindings/python/test/sbml/TestKineticLaw.py: no change ./src/bindings/python/test/sbml/TestInternalConsistencyChecks.py: no change ./src/bindings/python/test/sbml/TestInitialAssignment_newSetters.py: no change ./src/bindings/python/test/sbml/TestInitialAssignment.py: no change ./src/bindings/python/test/sbml/TestGetMultipleObjects.py: no change ./src/bindings/python/test/sbml/TestFunctionDefinition_newSetters.py: no change ./src/bindings/python/test/sbml/TestFunctionDefinition.py: no change ./src/bindings/python/test/sbml/TestEvent_newSetters.py: no change ./src/bindings/python/test/sbml/TestEventAssignment_newSetters.py: no change ./src/bindings/python/test/sbml/TestEventAssignment.py: no change ./src/bindings/python/test/sbml/TestEvent.py: no change ./src/bindings/python/test/sbml/TestDelay.py: no change ./src/bindings/python/test/sbml/TestCopyAndClone.py: no change ./src/bindings/python/test/sbml/TestConstraint_newSetters.py: no change ./src/bindings/python/test/sbml/TestConstraint.py: no change ./src/bindings/python/test/sbml/TestConsistencyChecks.py: no change ./src/bindings/python/test/sbml/TestCompartment_newSetters.py: no change ./src/bindings/python/test/sbml/TestCompartmentVolumeRule.py: no change ./src/bindings/python/test/sbml/TestCompartmentType_newSetters.py: no change ./src/bindings/python/test/sbml/TestCompartmentType.py: no change ./src/bindings/python/test/sbml/TestCompartment.py: no change ./src/bindings/python/test/sbml/TestAssignmentRule.py: no change ./src/bindings/python/test/sbml/TestAncestor.py: no change ./src/bindings/python/test/sbml/TestAlgebraicRule.py: no change ./src/bindings/python/test/sbml/TestRequiredElements.py: no change ./src/bindings/python/test/sbml/TestRequiredAttributes.py: no change ./src/bindings/python/test/xml/TestXMLTriple.py: no change ./src/bindings/python/test/xml/TestXMLToken_newSetters.py: no change ./src/bindings/python/test/xml/TestXMLToken.py: no change ./src/bindings/python/test/xml/TestXMLOutputStream.py: no change ./src/bindings/python/test/xml/TestXMLNode_newSetters.py: no change ./src/bindings/python/test/xml/TestXMLNode.py: no change ./src/bindings/python/test/xml/TestXMLNamespaces.py: no change ./src/bindings/python/test/xml/TestXMLErrorC.py: no change ./src/bindings/python/test/xml/TestXMLError.py: no change ./src/bindings/python/test/xml/TestXMLCopyAndClone.py: no change ./src/bindings/python/test/xml/TestXMLAttributesC.py: no change ./src/bindings/python/test/xml/TestXMLAttributes.py: no change ./src/bindings/python/test/math/TestValidASTNode.py: no change ./src/bindings/python/test/math/TestReadMathML.py: no change ./src/bindings/python/test/math/TestMathReadFromFile2.py: no change ./src/bindings/python/test/math/TestMathReadFromFile1.py: no change ./src/bindings/python/test/math/TestL3FormulaParserC.py: no change ./src/bindings/python/test/math/TestASTNode.py: no change ./src/bindings/python/test/math/TestWriteMathML.py: no change ./src/bindings/python/test/annotation/TestValidation.py: no change ./src/bindings/python/test/annotation/TestRDFAnnotationC.py: no change ./src/bindings/python/test/annotation/TestRDFAnnotation2.py: no change ./src/bindings/python/test/annotation/TestRDFAnnotation.py: no change ./src/bindings/python/test/annotation/TestModelHistory_newSetters.py: no change ./src/bindings/python/test/annotation/TestModelHistory.py: no change ./src/bindings/python/test/annotation/TestModelCreator_newSetters.py: no change ./src/bindings/python/test/annotation/TestL3ModelHistory.py: no change ./src/bindings/python/test/annotation/TestDate_newSetters.py: no change ./src/bindings/python/test/annotation/TestCVTerms_newSetters.py: no change ./src/bindings/python/test/annotation/TestCVTerms.py: no change ./src/bindings/python/test/annotation/TestAnnotationCopyAndClone.py: no change ./src/bindings/swig/swigdoc.py: updating ./src/bindings/swig/libsbmlutils.py: updating ./src/bindings/swig/argparse.py: no change ./examples/python/readSBML.py: updating ./examples/python/replaceOneFD.py: updating ./examples/python/inlineFunctionDefinitions.py: updating ./examples/python/unsetNotes.py: updating ./examples/python/promoteParameters.py: updating ./examples/python/unsetAnnotation.py: updating ./examples/python/evaluateCustomMath.py: updating ./examples/python/printRegisteredPackages.py: updating ./examples/python/translateMath.py: updating ./examples/python/getAllElementsWithNotes.py: updating ./examples/python/echoSBML.py: updating ./examples/python/validateSBML.py: updating ./examples/python/addCVTerms.py: updating ./examples/python/stripPackage.py: updating ./examples/python/addCustomValidator.py: updating ./examples/python/printAnnotation.py: updating ./examples/python/addingEvidenceCodes_2.py: updating ./examples/python/distrib/createNormalExample.py: updating ./examples/python/distrib/createStatisticsExample .py: updating ./examples/python/createExampleSBML.py: updating ./examples/python/renameSId.py: no change ./examples/python/inlineInitialAssignments.py: updating ./examples/python/comp/flattenModel.py: updating ./examples/python/groups/print_groups.py: updating ./examples/python/groups/groups_example1.py: updating ./examples/python/addingEvidenceCodes_1.py: updating ./examples/python/printSBML.py: updating ./examples/python/appendAnnotation.py: updating ./examples/python/setIdFromNames.py: updating ./examples/python/render/addRenderInformation.py: no change ./examples/python/render/printRenderInformation.py: no change ./examples/python/render/removeRenderInformation.py: no change ./examples/python/stringInput.py: updating ./examples/python/createSimpleModel.py: updating ./examples/python/fbc/fbc_example1.py: updating ./examples/python/fbc/print_gene_product_association.py: updating ./examples/python/fbc/convertFbcToCobra.py: updating ./examples/python/fbc/convertCobraToFbc.py: updating ./examples/python/printUnits.py: updating ./examples/python/multi/multi_example2.py: no change ./examples/python/multi/multi_example3.py: no change ./examples/python/multi/multi_example1.py: no change ./examples/python/multi/printMulti.py: no change ./examples/python/layout/convertLayout.py: updating ./examples/python/layout/example1-L3.py: updating ./examples/python/layout/example1.py: updating ./examples/python/addModelHistory.py: updating ./examples/python/callExternalValidator.py: updating ./examples/python/validateSBMLWithCallback.py: updating ./examples/python/append_to_note.py: updating ./examples/python/convertSBML.py: updating ./examples/python/qual/qual_example1.py: updating ./examples/python/printMath.py: updating ./examples/python/printsupported.py: updating ./examples/python/printNotes.py: updating ./docs/src/utilities/compare-classes.py: updating ./docs/src/utilities/generate-cplusplus-class-names.py: updating ./docs/src/utilities/generate-pkg-stylesheet.py: updating ./docs/src/utilities/generate-converters-list.py: updating ./docs/src/utilities/pythondocpreprocessor.py: updating ./docs/src/utilities/generate-extensions-summary.py: updating ./docs/src/utilities/generate-class-name-list.py: updating ./docs/src/utilities/compare-constants.py: updating ./docs/src/filters/doc-filter-csharp.py: updating ./docs/src/filters/doc-filter-c.py: updating ./docs/src/filters/doc-filter-python.py: updating ./docs/src/python-substitutions/CompPkgNamespaces.py: no change ./docs/src/python-substitutions/DateList.py: no change ./docs/src/python-substitutions/libsbml.py: no change ./docs/src/python-substitutions/LayoutPkgNamespaces.py: no change ./docs/src/python-substitutions/FbcPkgNamespaces.py: no change ./docs/src/python-substitutions/ModelCreatorList.py: no change ./docs/src/python-substitutions/SBaseList.py: no change ./docs/src/python-substitutions/SBMLNamespacesList.py: no change ./docs/src/python-substitutions/CVTermList.py: no change ./docs/src/python-substitutions/ostringstream.py: no change ./docs/src/python-substitutions/QualPkgNamespaces.py: no change ./docs/src/python-substitutions/ASTNodeList.py: no change ./docs/src/python-substitutions/ostream.py: no change ./docs/src/python-substitutions/GroupsPkgNamespaces.py: no change + python3 -m lib2to3 -f print -w docs/src/filters/ RefactoringTool: Refactored docs/src/filters/doc-filter-c.py RefactoringTool: Refactored docs/src/filters/doc-filter-csharp.py RefactoringTool: Refactored docs/src/filters/doc-filter-python.py RefactoringTool: Files that were modified: --- docs/src/filters/doc-filter-c.py (original) +++ docs/src/filters/doc-filter-c.py (refactored) @@ -92,7 +92,7 @@ global libsbml_classes if len(args) != 2: - print main.__doc__ + print(main.__doc__) sys.exit(1) # Check if the environment variable LIBSBML_CLASSES_LIST is set. --- docs/src/filters/doc-filter-csharp.py (original) +++ docs/src/filters/doc-filter-csharp.py (refactored) @@ -67,7 +67,7 @@ """ if len(args) != 2: - print main.__doc__ + print(main.__doc__) sys.exit(1) istream = open(args[1], 'r') --- docs/src/filters/doc-filter-python.py (original) +++ docs/src/filters/doc-filter-python.py (refactored) @@ -284,7 +284,7 @@ global libsbml_enums if len(args) != 2: - print main.__doc__ + print(main.__doc__) sys.exit(1) # Check if the environment variable LIBSBML_CLASSES_LIST is set. RefactoringTool: docs/src/filters/doc-filter-c.py RefactoringTool: docs/src/filters/doc-filter-csharp.py RefactoringTool: docs/src/filters/doc-filter-python.py + python3 -m lib2to3 -f next -w docs RefactoringTool: Refactored docs/src/utilities/generate-pkg-stylesheet.py RefactoringTool: Files that were modified: --- docs/src/utilities/generate-pkg-stylesheet.py (original) +++ docs/src/utilities/generate-pkg-stylesheet.py (refactored) @@ -168,7 +168,7 @@ # Next, read the source dir to find out the L3 packages available, and # extract the names of the libSBML object classes in each package. known_pkgs = [entry[0] for entry in color_table] - top_root, top_level_dirs, top_level_files = os.walk(src_dir).next() + top_root, top_level_dirs, top_level_files = next(os.walk(src_dir)) found_pkgs = [pkg for pkg in known_pkgs if pkg in top_level_dirs] # Now generate CSS styling that uses attribute selectors specialized to RefactoringTool: docs/src/utilities/generate-pkg-stylesheet.py + grep -e 'This file was automatically generated by SWIG' -r . -l + xargs rm + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Jejqyr + umask 022 + cd /builddir/build/BUILD + cd libSBML-5.19.0-Source + mkdir -p build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ python3-config --abiflags ++ python3-config --abiflags + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -B build -DENABLE_LAYOUT=ON -DENABLE_QUAL=ON -DENABLE_COMP=ON -DENABLE_FBC=ON -DENABLE_RENDER=ON -DENABLE_GROUPS=ON -DENABLE_MULTI=ON -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_PYTHON:BOOL=ON -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.10 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.10.so -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_USE_DYNAMIC_LOOKUP:BOOL=ON -DWITH_PERL:BOOL=ON -DPERL_EXECUTABLE:FILEPATH=/usr/bin/perl -DPERL_INCLUDE_PATH:PATH=/usr/lib64/perl5/CORE -DPERL_LIBRARY:FILEPATH=/usr/lib64/libperl.so -DWITH_RUBY:BOOL=ON -DRUBY_SITEARCH_DIR:PATH=/usr/local/lib64/ruby/site_ruby -DRUBY_SITELIB_DIR:PATH=/usr/local/share/ruby/site_ruby -DRUBY_VENDORARCH_DIR:PATH=/usr/lib64/ruby/vendor_ruby -DRUBY_VENDORLIB_DIR:PATH=/usr/share/ruby/vendor_ruby -DRUBY_HAS_VENDOR_RUBY:BOOL=ON -DWITH_R:BOOL=ON -DR_INCLUDE_DIRS:PATH=/usr/include/R -DWITH_CHECK=ON -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES -DWITH_MATLAB:BOOL=OFF -Wno-dev -DEXIT_ON_ERROR:BOOL=ON -- The C compiler identification is GNU 11.2.1 -- The CXX compiler identification is GNU 11.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Found SWIG: /usr/bin/swig (found version "4.0.2") -- Looking for BZ2_bzCompressInit in /usr/lib64/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib64/libbz2.so - found -- Looking for gzopen in /usr/lib64/libz.so -- Looking for gzopen in /usr/lib64/libz.so - found -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.0") -- Checking for module 'minizip' -- Found minizip, version 3.0.2 -- Performing Test CHECK_CHECK_TEST -- Performing Test CHECK_CHECK_TEST - Success -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found PythonInterp: /usr/bin/python3 (found version "3.10.1") -- Found Perl: /usr/bin/perl (found version "5.34.0") -- Found PerlLibs: /usr/lib64/libperl.so (found version "5.34.0") -- Found PythonLibs: /usr/lib64/libpython3.10.so (found version "3.10.1") -- Found Ruby: /usr/bin/ruby (found suitable version "3.0.3", minimum required is "1.8.0") -- ---------------------------------------------------------------------- libSBML version 5.19.0 ---------------------------------------------------------------------- More information and the latest version are available online at http://sbml.org/Software/libSBML Please report problems using the issue tracker at http://sbml.org/Software/libsbml/issue-tracker To contact the developers directly, email libsbml-team@googlegroups.com Configured on host '362278220665418d9a027dcb1b35e5eb' host type = Linux host operating system = Linux 5.11.12-300.fc34.aarch64 host CPU architecture = aarch64 General build flags: CC = /usr/bin/gcc CXX = /usr/bin/g++ CPPFLAGS = -DLINUX CFLAGS = -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 XML parser library configuration: XML library = libxml2 CPPFLAGS for XML = -I/usr/include/libxml2 LIBS for XML = /usr/lib64/libxml2.so Other libSBML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig (Version 4.0.2) -- Using Python = /usr/bin/python3 -- Using Perl = /usr/bin/perl -- Using Ruby = -- Using R = /usr/bin/R -- Using libcheck = /usr/lib64/libcheck.so -- Using C++ namespace ('libsbml') = no -- -- Build examples = no -- -- -- Support for SBML Level 3 Packages: -- SBML 'comp' package = ON -- SBML 'distrib' package = OFF -- SBML 'fbc' package = ON -- SBML 'groups' package = ON -- SBML 'l3v2extendedmath' package = ON -- SBML 'layout' package = ON -- SBML 'multi' package = ON -- SBML 'qual' package = ON -- SBML 'render' package = ON -- -- Other potentially important settings: -- Compression support is enabled for .zip and .gz files -- Compression support is enabled for .bz2 files -- ---------------------------------------------------------------------- -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP CMAKE_SKIP_INSTALL_RPATH CSHARP_COMPILER INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libSBML-5.19.0-Source/build + /usr/bin/make -O -j4 V=1 VERBOSE=1 -C build make: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/cmake -S/builddir/build/BUILD/libSBML-5.19.0-Source -B/builddir/build/BUILD/libSBML-5.19.0-Source/build --check-build-system CMakeFiles/Makefile.cmake 0 make: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.19.0-Source/build/CMakeFiles /builddir/build/BUILD/libSBML-5.19.0-Source/build//CMakeFiles/progress.marks make: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/depend /usr/bin/make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/depend /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_swig.dir/depend /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Submodel* CompModelPlugin::createSubmodel()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:318:3: note: in expansion of macro 'COMP_CREATE_NS' 318 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Port* CompModelPlugin::createPort()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:459:3: note: in expansion of macro 'COMP_CREATE_NS' 459 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Submodel* CompModelPlugin::createSubmodel()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:318:3: note: in expansion of macro 'COMP_CREATE_NS' 318 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp: In member function 'Port* CompModelPlugin::createPort()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.cpp:459:3: note: in expansion of macro 'COMP_CREATE_NS' 459 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:75, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ModelDefinition* CompSBMLDocumentPlugin::createModelDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:405:3: note: in expansion of macro 'COMP_CREATE_NS' 405 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ExternalModelDefinition* CompSBMLDocumentPlugin::createExternalModelDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:546:3: note: in expansion of macro 'COMP_CREATE_NS' 546 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h:75, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ModelDefinition* CompSBMLDocumentPlugin::createModelDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:405:3: note: in expansion of macro 'COMP_CREATE_NS' 405 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp: In member function 'ExternalModelDefinition* CompSBMLDocumentPlugin::createExternalModelDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBMLDocumentPlugin.cpp:546:3: note: in expansion of macro 'COMP_CREATE_NS' 546 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.h:72, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:41: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual SBase* CompSBasePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:175:7: note: in expansion of macro 'COMP_CREATE_NS' 175 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedElement* CompSBasePlugin::createReplacedElement()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:378:3: note: in expansion of macro 'COMP_CREATE_NS' 378 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedBy* CompSBasePlugin::createReplacedBy()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:452:3: note: in expansion of macro 'COMP_CREATE_NS' 452 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual void CompSBasePlugin::createListOfReplacedElements()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:559:5: note: in expansion of macro 'COMP_CREATE_NS' 559 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.h:72, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:41: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual SBase* CompSBasePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:175:7: note: in expansion of macro 'COMP_CREATE_NS' 175 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedElement* CompSBasePlugin::createReplacedElement()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:378:3: note: in expansion of macro 'COMP_CREATE_NS' 378 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'ReplacedBy* CompSBasePlugin::createReplacedBy()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:452:3: note: in expansion of macro 'COMP_CREATE_NS' 452 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp: In member function 'virtual void CompSBasePlugin::createListOfReplacedElements()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompSBasePlugin.cpp:559:5: note: in expansion of macro 'COMP_CREATE_NS' 559 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Swig Perl bindings source cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/../swig/swigdoc.py --language perl --top /builddir/build/BUILD/libSBML-5.19.0-Source --master /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/../swig/libsbml.i --output /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl/LibSBML.pod --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_L3V2EXTENDEDMATH --define USE_LAYOUT --define USE_MULTI --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_L3V2EXTENDEDMATH --define USE_MULTI --define USE_QUAL --define USE_RENDER cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/../swig/ -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/include -c++ -perl5 -proxy -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl/LibSBML_wrap.cpp /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/LibSBML.i /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLInputStream.h:241: Warning 314: 'next' is a perl keyword /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBase.h:816: Warning 509: Overloaded method SBase::getAncestorOfType(int,std::string const &) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBase.h:864: Warning 509: as it is shadowed by SBase::getAncestorOfType(int,std::string const) const. /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:344: Warning 509: Overloaded method GraphicalPrimitive2D::setFillRule(FillRule_t const) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:328: Warning 509: as it is shadowed by GraphicalPrimitive2D::setFillRule(GraphicalPrimitive2D::FILL_RULE). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.h:389: Warning 509: Overloaded method GradientBase::setSpreadMethod(GradientSpreadMethod_t const) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.h:373: Warning 509: as it is shadowed by GradientBase::setSpreadMethod(GradientBase::SPREADMETHOD). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Text.h:448: Warning 509: Overloaded method Text::setFontWeight(Text::FONT_WEIGHT) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Text.h:444: Warning 509: as it is shadowed by Text::setFontWeight(FontWeight_t const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Text.h:486: Warning 509: Overloaded method Text::setFontStyle(Text::FONT_STYLE) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Text.h:481: Warning 509: as it is shadowed by Text::setFontStyle(FontStyle_t const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Text.h:522: Warning 509: Overloaded method Text::setTextAnchor(Text::TEXT_ANCHOR) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Text.h:517: Warning 509: as it is shadowed by Text::setTextAnchor(HTextAnchor_t const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Text.h:559: Warning 509: Overloaded method Text::setVTextAnchor(Text::TEXT_ANCHOR) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Text.h:554: Warning 509: as it is shadowed by Text::setVTextAnchor(VTextAnchor_t const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:537: Warning 509: Overloaded method RenderGroup::setFontWeight(Text::FONT_WEIGHT) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:533: Warning 509: as it is shadowed by RenderGroup::setFontWeight(FontWeight_t const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:575: Warning 509: Overloaded method RenderGroup::setFontStyle(Text::FONT_STYLE) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:570: Warning 509: as it is shadowed by RenderGroup::setFontStyle(FontStyle_t const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:612: Warning 509: Overloaded method RenderGroup::setTextAnchor(Text::TEXT_ANCHOR) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:607: Warning 509: as it is shadowed by RenderGroup::setTextAnchor(HTextAnchor_t const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:684: Warning 509: Overloaded method RenderGroup::setVTextAnchor(VTextAnchor_t const) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:644: Warning 509: as it is shadowed by RenderGroup::setVTextAnchor(Text::TEXT_ANCHOR). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:687: Warning 509: Overloaded method RenderGroup::setVtextAnchor(VTextAnchor_t const) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:648: Warning 509: as it is shadowed by RenderGroup::setVtextAnchor(Text::TEXT_ANCHOR). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:915: Warning 509: Overloaded method DefaultValues::setSpreadMethod(GradientSpreadMethod_t const) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:900: Warning 509: as it is shadowed by DefaultValues::setSpreadMethod(GradientBase::SPREADMETHOD const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1146: Warning 509: Overloaded method DefaultValues::setFillRule(FillRule_t) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1130: Warning 509: as it is shadowed by DefaultValues::setFillRule(GraphicalPrimitive2D::FILL_RULE const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1266: Warning 509: Overloaded method DefaultValues::setFontWeight(FontWeight_t) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1250: Warning 509: as it is shadowed by DefaultValues::setFontWeight(Text::FONT_WEIGHT const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1314: Warning 509: Overloaded method DefaultValues::setFontStyle(FontStyle_t) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1298: Warning 509: as it is shadowed by DefaultValues::setFontStyle(Text::FONT_STYLE const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1362: Warning 509: Overloaded method DefaultValues::setTextAnchor(HTextAnchor_t) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1346: Warning 509: as it is shadowed by DefaultValues::setTextAnchor(Text::TEXT_ANCHOR const). /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1410: Warning 509: Overloaded method DefaultValues::setVTextAnchor(VTextAnchor_t) effectively ignored, /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.h:1394: Warning 509: as it is shadowed by DefaultValues::setVTextAnchor(Text::TEXT_ANCHOR const). make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Built target binding_perl_swig make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/CompBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/CompBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints 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CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/CompBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/CompBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Deletion.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Deletion.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Deletion.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o cd 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator 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-MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ExternalModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ExternalModelDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp: In member function 'virtual SBase* ListOfDeletions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:167:5: note: in expansion of macro 'COMP_CREATE_NS' 167 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfDeletions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp: In member function 'virtual SBase* ListOfDeletions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfDeletions.cpp:167:5: note: in expansion of macro 'COMP_CREATE_NS' 167 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Swig Ruby source cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby/../swig/ -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/include -c++ -ruby -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby/libsbml.i /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby/../swig/render-package.i:118: Warning 801: Wrong class name (corrected to `Double_array') /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby/../swig/render-package.i:118: Warning 801: Wrong class name (corrected to `Double_array') /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby/../swig/render-package.i:119: Warning 801: Wrong class name (corrected to `Int_array') /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby/../swig/render-package.i:119: Warning 801: Wrong class name (corrected to `Int_array') make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 1%] Built target binding_ruby_swig make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_swig.dir/build.make src/bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_swig.dir/build.make src/bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp: In member function 'virtual SBase* ListOfExternalModelDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:160:5: note: in expansion of macro 'COMP_CREATE_NS' 160 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp: In member function 'virtual SBase* ListOfExternalModelDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.cpp:160:5: note: in expansion of macro 'COMP_CREATE_NS' 160 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp: In member function 'virtual SBase* ListOfModelDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:160:5: note: in expansion of macro 'COMP_CREATE_NS' 160 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 1%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp: In member function 'virtual SBase* ListOfModelDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfModelDefinitions.cpp:160:5: note: in expansion of macro 'COMP_CREATE_NS' 160 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp: In member function 'virtual SBase* ListOfPorts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:159:5: note: in expansion of macro 'COMP_CREATE_NS' 159 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfPorts.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp: In member function 'virtual SBase* ListOfPorts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfPorts.cpp:159:5: note: in expansion of macro 'COMP_CREATE_NS' 159 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp: In member function 'virtual SBase* ListOfReplacedElements::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:123:5: note: in expansion of macro 'COMP_CREATE_NS' 123 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfReplacedElements.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp: In member function 'virtual SBase* ListOfReplacedElements::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfReplacedElements.cpp:123:5: note: in expansion of macro 'COMP_CREATE_NS' 123 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp: In member function 'virtual SBase* ListOfSubmodels::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:159:5: note: in expansion of macro 'COMP_CREATE_NS' 159 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ListOfSubmodels.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp: In member function 'virtual SBase* ListOfSubmodels::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ListOfSubmodels.cpp:159:5: note: in expansion of macro 'COMP_CREATE_NS' 159 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 1%] Swig: R Bindings cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r" -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.19.0-Source/build" -DCUR_SRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.19.0-Source" -DCMAKE_COMMAND="/usr/bin/cmake" -DPYTHON_EXECUTABLE="/usr/bin/python3" -DSWIG_SWIGDOCDEFINES="" -DSWIG_ARGS="-DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER" -DSWIG_EXECUTABLE="/usr/bin/swig" -DLIBSBML_REMOVE_WRAPPERS=OFF -P /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r/swig-binding.cmake cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML.R" -P /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r/patch-swig-file.cmake -- Patched libSBML.R cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp" -P /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r/patch-swig-file.cmake -- Patched libsbml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLInputStream.h:241: Warning 314: 'next' is a R keyword, renaming to '_next' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Built target binding_r_swig make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ModelDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ModelDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Port.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedBy.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ReplacedBy.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Port.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML 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directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Replacing.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Replacing.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator 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src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/ReplacedElement.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/ReplacedElement.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 2%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'SBaseRef* SBaseRef::createSBaseRef()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:557:5: note: in expansion of macro 'COMP_CREATE_NS' 557 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'virtual SBase* SBaseRef::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:676:7: note: in expansion of macro 'COMP_CREATE_NS' 676 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:687:7: note: in expansion of macro 'COMP_CREATE_NS' 687 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Replacing.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Replacing.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/sbml/Submodel.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp: In member function 'Deletion* Submodel::createDeletion()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:502:3: note: in expansion of macro 'COMP_CREATE_NS' 502 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/SBMLFileResolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/CompFlatteningConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/SBMLResolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/SBaseRef.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'SBaseRef* SBaseRef::createSBaseRef()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:557:5: note: in expansion of macro 'COMP_CREATE_NS' 557 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp: In member function 'virtual SBase* SBaseRef::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:676:7: note: in expansion of macro 'COMP_CREATE_NS' 676 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/SBaseRef.cpp:687:7: note: in expansion of macro 'COMP_CREATE_NS' 687 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util 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CMakeFiles/sbml.dir/sbml/packages/comp/util/SBMLUri.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/SBMLUri.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/sbml/Submodel.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp: In member function 'Deletion* Submodel::createDeletion()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/Submodel.cpp:502:3: note: in expansion of macro 'COMP_CREATE_NS' 502 | COMP_CREATE_NS(compns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/CompValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension 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Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/CompFlatteningConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 3%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 0%] Swig Python source cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/../swig/swigdoc.py --language python --top /builddir/build/BUILD/libSBML-5.19.0-Source --master /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/../swig/libsbml.i --output /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/pydoc-doxygen.i --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_L3V2EXTENDEDMATH --define USE_LAYOUT --define USE_MULTI --define USE_QUAL --define USE_RENDER --define USE_COMP --define USE_FBC --define USE_GROUPS --define USE_L3V2EXTENDEDMATH --define USE_MULTI --define USE_QUAL --define USE_RENDER cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/generate-class-name-list.py /builddir/build/BUILD/libSBML-5.19.0-Source/src > /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/class-list.txt cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/generate-converters-list.py /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/class-list.txt > /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/libsbml-converters.txt cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/python3 /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/doc-converter/rewrite_pydoc.py -f /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/pydoc-doxygen.i -o /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/pydoc-normal.i -i /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/../../../docs/src/common-text -g /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/../../../docs/src/common-graphics Warning: unable to expand @htmlinclude 'pkg-marker-l3v2extendedmath.html' Warning: unable to expand @htmlinclude 'pkg-marker-l3v2extendedmath.html' Warning: unable to expand @htmlinclude 'pkg-marker-l3v2extendedmath.html' Warning: unable to expand @htmlinclude 'pkg-marker-l3v2extendedmath.html' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc-doxygen.i pydoc.i cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/../swig/ -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/include -DGENERATING_DOCS -c++ -python -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/libsbml.i cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc.i pydoc-doxygen.i cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename libsbml.py libsbml-doxygen.py cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc-normal.i pydoc.i cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/../swig/ -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/include -c++ -python -DLIBSBML_COMPILED_IN_SRC -DUSE_LIBXML -DUSE_BZ2 -DUSE_ZLIB -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_COMP -DUSE_FBC -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -o /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/libsbml_wrap.cpp /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/libsbml.i cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/cmake -E rename pydoc.i pydoc-normal.i cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python" -DVERSION="5.19.0" -P /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/add_version.cmake cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python" -DPYTHON_USE_API2_WARNINGS="OFF" -P /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/patch-python.cmake -- Patching Python wrapper make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/../swig/std_set.i:65: Warning 314: 'del' is a python keyword, renaming to '_del' /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/../swig/std_set.i:65: Warning 314: 'del' is a python keyword, renaming to '_del' Python: Add Version to generated file make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 4%] Built target binding_python_swig make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/SBMLFileResolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:40: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp: In member function 'void ExtModelReferenceCycles::logCycle(const Model&, std::string, std::string)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:290:3: note: in expansion of macro 'COMP_CREATE_NS' 290 | COMP_CREATE_NS(compns, m.getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolver.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 4%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:40: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp: In member function 'void SubmodelReferenceCycles::logCycle(const Model&, std::string, std::string)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:329:3: note: in expansion of macro 'COMP_CREATE_NS' 329 | COMP_CREATE_NS(compns, m.getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS 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src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLResolverRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/SBMLResolverRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UniqueModelIds.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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object src/CMakeFiles/sbml.dir/sbml/packages/comp/validator/constraints/UnitReplacementCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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/builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.h:150, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:39: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'virtual SBase* FbcModelPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:202:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 202 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'FluxBound* FbcModelPlugin::createFluxBound()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:838:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 838 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'Objective* FbcModelPlugin::createObjective()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1103:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1103 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneProduct* FbcModelPlugin::createGeneProduct()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1283:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1283 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneAssociation* FbcModelPlugin::createGeneAssociation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1490:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1490 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'virtual SBase* FbcReactionPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:153:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 153 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'GeneProductAssociation* FbcReactionPlugin::createGeneProductAssociation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:451:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 451 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcAnd* FbcAnd::createAnd()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:305:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 305 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcOr* FbcAnd::createOr()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:342:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 342 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'GeneProductRef* FbcAnd::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:379:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 379 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Association.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Association.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/CompConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcAnd* FbcOr::createAnd()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:317:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 317 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcOr* FbcOr::createOr()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:354:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 354 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'GeneProductRef* FbcOr::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:391:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 391 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.h:110, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcAnd* ListOfFbcAssociations::createAnd()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:948:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 948 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcOr* ListOfFbcAssociations::createOr()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:985:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 985 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'GeneProductRef* ListOfFbcAssociations::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1022:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1022 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'virtual SBase* ListOfFbcAssociations::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1118:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1118 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1126:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1126 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1134:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1134 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1142:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1142 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxBound.h:131, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp: In member function 'virtual SBase* ListOfFluxBounds::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:1181:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1181 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/CompUnitConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'Association* GeneAssociation::createAssociation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:355:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 355 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'virtual SBase* ListOfGeneAssociations::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:704:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 704 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.h:98, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'FluxObjective* ListOfFluxObjectives::createFluxObjective()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1105:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1105 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'virtual SBase* ListOfFluxObjectives::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1201:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1201 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/CompValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.h:94, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'GeneProduct* ListOfGeneProducts::createGeneProduct()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1103:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1103 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'virtual SBase* ListOfGeneProducts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1199:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1199 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductRef.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:101, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcAnd* GeneProductAssociation::createAnd()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:217:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 217 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcOr* GeneProductAssociation::createOr()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:232:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 232 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual GeneProductRef* GeneProductAssociation::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:247:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 247 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual SBase* GeneProductAssociation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:932:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 932 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ClassReplacements.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/ClassReplacements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/CompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/CompIdBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/sbml/Objective.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.h:139, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'FluxObjective* Objective::createFluxObjective()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:477:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 477 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'Objective* ListOfObjectives::createObjective()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1379:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1379 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'virtual SBase* ListOfObjectives::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1498:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1498 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcToCobraConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS 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make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV1ToV2Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:40: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp: In member function 'void ExtModelReferenceCycles::logCycle(const Model&, std::string, std::string)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.cpp:290:3: note: in expansion of macro 'COMP_CREATE_NS' 290 | COMP_CREATE_NS(compns, m.getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src 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CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueModelWideIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompModelPlugin.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:40: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp: In member function 'void SubmodelReferenceCycles::logCycle(const Model&, std::string, std::string)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/CompExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(CompPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.cpp:329:3: note: in expansion of macro 'COMP_CREATE_NS' 329 | COMP_CREATE_NS(compns, m.getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.h:57, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp: In member function 'Group* GroupsModelPlugin::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:238:5: note: in expansion of macro 'GROUPS_CREATE_NS' 238 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/UniqueCompIdBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Group.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Group.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Group.h:169, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Group.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Group.cpp: In member function 'Member* Group::createMember()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Group.cpp:454:5: note: in expansion of macro 'GROUPS_CREATE_NS' 454 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.h:77, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'Group* ListOfGroups::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:252:5: note: in expansion of macro 'GROUPS_CREATE_NS' 252 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'virtual SBase* ListOfGroups::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:312:3: note: in expansion of macro 'GROUPS_CREATE_NS' 312 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 8%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.h:105, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'Member* ListOfMembers::createMember()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:352:5: note: in expansion of macro 'GROUPS_CREATE_NS' 352 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'virtual SBase* ListOfMembers::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:463:3: note: in expansion of macro 'GROUPS_CREATE_NS' 463 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints/UniqueComponentIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/GroupsConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/GroupsIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 9%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/groups/sbml/Member.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.h:62, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp: In member function 'Layout* LayoutModelPlugin::createLayout()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:485:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 485 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 10%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS 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src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/extension/LayoutSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/BoundingBox.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/BoundingBox.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.h:150, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:39: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'virtual SBase* FbcModelPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:202:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 202 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'FluxBound* FbcModelPlugin::createFluxBound()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:838:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 838 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'Objective* FbcModelPlugin::createObjective()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1103:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1103 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneProduct* FbcModelPlugin::createGeneProduct()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1283:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1283 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp: In member function 'GeneAssociation* FbcModelPlugin::createGeneAssociation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcModelPlugin.cpp:1490:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1490 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CompartmentGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src 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make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/CubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/CubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Curve.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Point.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:63, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'LineSegment* Curve::createLineSegment()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:366:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 366 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'CubicBezier* Curve::createCubicBezier()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:381:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 381 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'virtual SBase* ListOfLineSegments::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:649:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 649 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Dimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Dimensions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcReactionPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'virtual SBase* FbcReactionPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:153:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 153 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp: In member function 'GeneProductAssociation* FbcReactionPlugin::createGeneProductAssociation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcReactionPlugin.cpp:451:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 451 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Point.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:63, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.h:64, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:41: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'ReferenceGlyph* GeneralGlyph::createReferenceGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:656:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 656 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'virtual SBase* ListOfReferenceGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:1183:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 1183 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Point.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:39: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp: In member function 'virtual SBase* ListOfGraphicalObjects::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:1207:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1207 | LAYOUT_CREATE_NS(layoutns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcSpeciesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/LineSegment.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Layout.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:65, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'CompartmentGlyph* Layout::createCompartmentGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1387:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1387 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'SpeciesGlyph* Layout::createSpeciesGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1403:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1403 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'ReactionGlyph* Layout::createReactionGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1419:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1419 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GeneralGlyph* Layout::createGeneralGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1434:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1434 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'TextGlyph* Layout::createTextGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1450:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1450 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GraphicalObject* Layout::createAdditionalGraphicalObject()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1467:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1467 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfLayouts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2048:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 2048 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfCompartmentGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2220:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 2220 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfSpeciesGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2372:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 2372 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfReactionGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2521:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 2521 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfTextGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2670:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 2670 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/Point.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Point.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Association.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Association.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 11%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Point.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:63, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:41: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'SpeciesReferenceGlyph* ReactionGlyph::createSpeciesReferenceGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:503:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 503 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'virtual SBase* ListOfSpeciesReferenceGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:980:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 980 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 12%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAnd.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcAnd* FbcAnd::createAnd()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:305:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 305 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'FbcOr* FbcAnd::createOr()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:342:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 342 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp: In member function 'GeneProductRef* FbcAnd::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAnd.cpp:379:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 379 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.h:110, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcAnd* ListOfFbcAssociations::createAnd()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:948:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 948 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'FbcOr* ListOfFbcAssociations::createOr()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:985:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 985 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'GeneProductRef* ListOfFbcAssociations::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1022:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1022 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp: In member function 'virtual SBase* ListOfFbcAssociations::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1118:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1118 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1126:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1126 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1134:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1134 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcAssociation.cpp:1142:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1142 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/LayoutValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FbcOr.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcAnd* FbcOr::createAnd()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:317:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 317 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'FbcOr* FbcOr::createOr()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:354:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 354 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp: In member function 'GeneProductRef* FbcOr::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FbcOr.cpp:391:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 391 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiASTPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'virtual SBase* MultiCompartmentPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:140:7: note: in expansion of macro 'MULTI_CREATE_NS' 140 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'CompartmentReference* MultiCompartmentPlugin::createCompartmentReference()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:587:5: note: in expansion of macro 'MULTI_CREATE_NS' 587 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxBound.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxBound.h:131, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp: In member function 'virtual SBase* ListOfFluxBounds::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxBound.cpp:1181:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1181 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/FluxObjective.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.h:98, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'FluxObjective* ListOfFluxObjectives::createFluxObjective()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1105:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1105 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp: In member function 'virtual SBase* ListOfFluxObjectives::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/FluxObjective.cpp:1201:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1201 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.h:51, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp: In member function 'virtual SBase* MultiListOfReactionsPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:136:8: note: in expansion of macro 'MULTI_CREATE_NS' 136 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'Association* GeneAssociation::createAssociation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:355:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 355 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp: In member function 'virtual SBase* ListOfGeneAssociations::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneAssociation.cpp:704:7: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 704 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.h:54, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'virtual SBase* MultiModelPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:132:7: note: in expansion of macro 'MULTI_CREATE_NS' 132 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'MultiSpeciesType* MultiModelPlugin::createMultiSpeciesType()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:325:5: note: in expansion of macro 'MULTI_CREATE_NS' 325 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'BindingSiteSpeciesType* MultiModelPlugin::createBindingSiteSpeciesType()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:352:5: note: in expansion of macro 'MULTI_CREATE_NS' 352 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'IntraSpeciesReaction* MultiModelPlugin::createIntraSpeciesReaction()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:408:4: note: in expansion of macro 'MULTI_CREATE_NS' 408 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.h:94, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'GeneProduct* ListOfGeneProducts::createGeneProduct()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1103:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1103 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp: In member function 'virtual SBase* ListOfGeneProducts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProduct.cpp:1199:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1199 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSimpleSpeciesReferencePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:129:5: note: in expansion of macro 'MULTI_CREATE_NS' 129 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:101, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcAnd* GeneProductAssociation::createAnd()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:217:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 217 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual FbcOr* GeneProductAssociation::createOr()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:232:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 232 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual GeneProductRef* GeneProductAssociation::createGeneProductRef()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:247:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 247 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp: In member function 'virtual SBase* GeneProductAssociation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductAssociation.cpp:932:3: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 932 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.h:58, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'virtual SBase* MultiSpeciesPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:137:5: note: in expansion of macro 'MULTI_CREATE_NS' 137 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'OutwardBindingSite* MultiSpeciesPlugin::createOutwardBindingSite()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:484:5: note: in expansion of macro 'MULTI_CREATE_NS' 484 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SpeciesFeature* MultiSpeciesPlugin::createSpeciesFeature()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:637:5: note: in expansion of macro 'MULTI_CREATE_NS' 637 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SubListOfSpeciesFeatures* MultiSpeciesPlugin::createSubListOfSpeciesFeatures()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:739:5: note: in expansion of macro 'MULTI_CREATE_NS' 739 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/GeneProductRef.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/GeneProductRef.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.h:56, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSpeciesReferencePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:128:5: note: in expansion of macro 'MULTI_CREATE_NS' 128 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'SpeciesTypeComponentMapInProduct* MultiSpeciesReferencePlugin::createSpeciesTypeComponentMapInProduct()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:299:5: note: in expansion of macro 'MULTI_CREATE_NS' 299 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/sbml/Objective.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.h:139, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'FluxObjective* Objective::createFluxObjective()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:477:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 477 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'Objective* ListOfObjectives::createObjective()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1379:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1379 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp: In member function 'virtual SBase* ListOfObjectives::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/FbcExtension.h:81:5: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 81 | EXTENSION_CREATE_NS_WITH_VERSION(FbcPkgNamespaces, variable, sbmlns, version); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml/Objective.cpp:1498:5: note: in expansion of macro 'FBC_CREATE_NS_WITH_VERSION' 1498 | FBC_CREATE_NS_WITH_VERSION(fbcns, getSBMLNamespaces(), getPackageVersion()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp: In member function 'virtual SBase* ListOfCompartmentReferences::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:746:7: note: in expansion of macro 'MULTI_CREATE_NS' 746 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/CobraToFbcConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util/CobraToFbcConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:76, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp: In member function 'virtual SBase* ListOfInSpeciesTypeBonds::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:846:5: note: in expansion of macro 'MULTI_CREATE_NS' 846 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 14%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util/FbcV2ToV1Converter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.h:82, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesFeatureType* MultiSpeciesType::createSpeciesFeatureType()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:454:5: note: in expansion of macro 'MULTI_CREATE_NS' 454 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeInstance* MultiSpeciesType::createSpeciesTypeInstance()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:611:5: note: in expansion of macro 'MULTI_CREATE_NS' 611 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeComponentIndex* MultiSpeciesType::createSpeciesTypeComponentIndex()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:768:5: note: in expansion of macro 'MULTI_CREATE_NS' 768 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'InSpeciesTypeBond* MultiSpeciesType::createInSpeciesTypeBond()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:925:5: note: in expansion of macro 'MULTI_CREATE_NS' 925 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* MultiSpeciesType::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1182:7: note: in expansion of macro 'MULTI_CREATE_NS' 1182 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* ListOfMultiSpeciesTypes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1630:5: note: in expansion of macro 'MULTI_CREATE_NS' 1630 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1637:5: note: in expansion of macro 'MULTI_CREATE_NS' 1637 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 15%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.h:142, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp: In member function 'virtual SBase* ListOfOutwardBindingSites::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:846:5: note: in expansion of macro 'MULTI_CREATE_NS' 846 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfPossibleSpeciesFeatureValues::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:744:5: note: in expansion of macro 'MULTI_CREATE_NS' 744 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/FbcConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureValues::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:591:5: note: in expansion of macro 'MULTI_CREATE_NS' 591 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:77, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'PossibleSpeciesFeatureValue* SpeciesFeatureType::createPossibleSpeciesFeatureValue()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:432:5: note: in expansion of macro 'MULTI_CREATE_NS' 432 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* SpeciesFeatureType::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:623:3: note: in expansion of macro 'MULTI_CREATE_NS' 623 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureTypes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:1004:5: note: in expansion of macro 'MULTI_CREATE_NS' 1004 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/FbcIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.h:84, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'SpeciesFeatureValue* SpeciesFeature::createSpeciesFeatureValue()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:549:5: note: in expansion of macro 'MULTI_CREATE_NS' 549 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* SpeciesFeature::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:762:3: note: in expansion of macro 'MULTI_CREATE_NS' 762 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* ListOfSpeciesFeatures::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1385:5: note: in expansion of macro 'MULTI_CREATE_NS' 1385 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1392:5: note: in expansion of macro 'MULTI_CREATE_NS' 1392 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/FbcValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/FbcValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:75, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentIndexes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:865:5: note: in expansion of macro 'MULTI_CREATE_NS' 865 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:75, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentMapInProducts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:934:5: note: in expansion of macro 'MULTI_CREATE_NS' 934 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:79, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp: In member function 'virtual SBase* ListOfSpeciesTypeInstances::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:859:5: note: in expansion of macro 'MULTI_CREATE_NS' 859 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints/FluxBoundsConsistent.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:118, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'SpeciesFeature* SubListOfSpeciesFeatures::createSpeciesFeature()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:275:5: note: in expansion of macro 'MULTI_CREATE_NS' 275 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'virtual SBase* SubListOfSpeciesFeatures::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:487:5: note: in expansion of macro 'MULTI_CREATE_NS' 487 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints/UniqueGeneProductLabels.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 16%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/UniqueISTBIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/extension/GroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.h:57, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp: In member function 'Group* GroupsModelPlugin::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsModelPlugin.cpp:238:5: note: in expansion of macro 'GROUPS_CREATE_NS' 238 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiComponentIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 17%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS 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CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfGroups.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.h:77, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'Group* ListOfGroups::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:252:5: note: in expansion of macro 'GROUPS_CREATE_NS' 252 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp: In member function 'virtual SBase* ListOfGroups::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfGroups.cpp:312:3: note: in expansion of macro 'GROUPS_CREATE_NS' 312 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 18%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Group.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Group.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Group.h:169, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Group.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Group.cpp: In member function 'Member* Group::createMember()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Group.cpp:454:5: note: in expansion of macro 'GROUPS_CREATE_NS' 454 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 18%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/ListOfMembers.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.h:105, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'Member* ListOfMembers::createMember()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:352:5: note: in expansion of macro 'GROUPS_CREATE_NS' 352 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp: In member function 'virtual SBase* ListOfMembers::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/GroupsExtension.h:75:1: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(GroupsPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/ListOfMembers.cpp:463:3: note: in expansion of macro 'GROUPS_CREATE_NS' 463 | GROUPS_CREATE_NS(groupsns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.h:63, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'QualitativeSpecies* QualModelPlugin::createQualitativeSpecies()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:839:5: note: in expansion of macro 'QUAL_CREATE_NS' 839 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'Transition* QualModelPlugin::createTransition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:1021:5: note: in expansion of macro 'QUAL_CREATE_NS' 1021 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator 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src/CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/sbml/Member.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml/Member.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/DefaultTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/GroupsValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/GroupsValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.h:77, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'DefaultTerm* ListOfFunctionTerms::createDefaultTerm()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1072:5: note: in expansion of macro 'QUAL_CREATE_NS' 1072 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'virtual SBase* ListOfFunctionTerms::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1129:3: note: in expansion of macro 'QUAL_CREATE_NS' 1129 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints/GroupCircularReferences.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints/GroupsUniqueModelWideIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Input.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Input.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Input.h:107, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Input.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Input.cpp: In member function 'virtual SBase* ListOfInputs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Input.cpp:1342:5: note: in expansion of macro 'QUAL_CREATE_NS' 1342 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/groups/validator/constraints/LOMembersConsistentReferences.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Output.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Output.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Output.h:98, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Output.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Output.cpp: In member function 'virtual SBase* ListOfOutputs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Output.cpp:1245:5: note: in expansion of macro 'QUAL_CREATE_NS' 1245 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT 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src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT 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src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 19%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.h:89, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp: In member function 'virtual SBase* ListOfQualitativeSpecies::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:1338:5: note: in expansion of macro 'QUAL_CREATE_NS' 1338 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/sbml/Transition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.h:91, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Input* Transition::createInput()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:460:5: note: in expansion of macro 'QUAL_CREATE_NS' 460 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Output* Transition::createOutput()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:644:5: note: in expansion of macro 'QUAL_CREATE_NS' 644 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'FunctionTerm* Transition::createFunctionTerm()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:802:5: note: in expansion of macro 'QUAL_CREATE_NS' 802 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'virtual SBase* ListOfTransitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:1771:5: note: in expansion of macro 'QUAL_CREATE_NS' 1771 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX 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src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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CMakeFiles/sbml-static.dir/sbml/packages/layout/extension/LayoutExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.h:62, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp: In member function 'Layout* LayoutModelPlugin::createLayout()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutModelPlugin.cpp:485:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 485 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 20%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ 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CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Curve.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Point.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:63, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'LineSegment* Curve::createLineSegment()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:366:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 366 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'CubicBezier* Curve::createCubicBezier()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:381:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 381 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp: In member function 'virtual SBase* ListOfLineSegments::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.cpp:649:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 649 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints/ResultBecomesNegative.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Dimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Point.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:63, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.h:64, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:41: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'ReferenceGlyph* GeneralGlyph::createReferenceGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:656:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 656 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp: In member function 'virtual SBase* ListOfReferenceGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GeneralGlyph.cpp:1183:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 1183 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:37: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp: In member function 'LocalRenderInformation* RenderLayoutPlugin::createLocalRenderInformation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:450:5: note: in expansion of macro 'RENDER_CREATE_NS' 450 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/GraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Point.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/BoundingBox.h:57, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/util/LayoutUtilities.h:45, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:39: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp: In member function 'virtual SBase* ListOfGraphicalObjects::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/GraphicalObject.cpp:1207:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1207 | LAYOUT_CREATE_NS(layoutns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:37: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp: In member function 'GlobalRenderInformation* RenderListOfLayoutsPlugin::createGlobalRenderInformation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:713:5: note: in expansion of macro 'RENDER_CREATE_NS' 713 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/LineSegment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 22%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Layout.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:65, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'CompartmentGlyph* Layout::createCompartmentGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1387:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1387 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'SpeciesGlyph* Layout::createSpeciesGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1403:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1403 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'ReactionGlyph* Layout::createReactionGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1419:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1419 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GeneralGlyph* Layout::createGeneralGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1434:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1434 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'TextGlyph* Layout::createTextGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1450:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1450 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'GraphicalObject* Layout::createAdditionalGraphicalObject()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:1467:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1467 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfLayouts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2048:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 2048 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfCompartmentGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2220:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 2220 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfSpeciesGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2372:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 2372 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfReactionGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2521:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 2521 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp: In member function 'virtual SBase* ListOfTextGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.cpp:2670:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 2670 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 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CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/Point.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Point.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Point.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/LineSegment.h:63, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Curve.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:41: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'SpeciesReferenceGlyph* ReactionGlyph::createSpeciesReferenceGlyph()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:503:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 503 | LAYOUT_CREATE_NS(layoutns,getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp: In member function 'virtual SBase* ListOfSpeciesReferenceGlyphs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:980:5: note: in expansion of macro 'LAYOUT_CREATE_NS' 980 | LAYOUT_CREATE_NS(layoutns,this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Ellipse.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Ellipse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/ReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/ReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.h:72, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'GlobalStyle* GlobalRenderInformation::createGlobalStyle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:369:5: note: in expansion of macro 'RENDER_CREATE_NS' 369 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/SpeciesGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH 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CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/SpeciesReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientStop.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/sbml/TextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util 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Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 23%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.h:102, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'GradientStop* GradientBase::createGradientStop()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:569:5: note: in expansion of macro 'RENDER_CREATE_NS' 569 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/util/LayoutUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/LayoutIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp: In member function 'GraphicalPrimitive1D::readAttributes(XMLAttributes const&, ExpectedAttributes const&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp:1167:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] 1167 | if (log && log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/LayoutConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/LayoutValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/LayoutValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.h:77, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'RenderGroup* LineEnding::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:535:3: note: in expansion of macro 'RENDER_CREATE_NS' 535 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'BoundingBox* LineEnding::createBoundingBox()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:561:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 561 | LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual SBase* LineEnding::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1315:3: note: in expansion of macro 'RENDER_CREATE_NS' 1315 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1317:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1317 | LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Image.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Image.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 24%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiASTPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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CMakeFiles/sbml-static.dir/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/constraints/UniqueIdsLayout.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.h:66, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:38: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'ColorDefinition* ListOfColorDefinitions::createColorDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:299:5: note: in expansion of macro 'RENDER_CREATE_NS' 299 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'virtual SBase* ListOfColorDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:371:3: note: in expansion of macro 'RENDER_CREATE_NS' 371 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LinearGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'virtual SBase* MultiCompartmentPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:140:7: note: in expansion of macro 'MULTI_CREATE_NS' 140 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp: In member function 'CompartmentReference* MultiCompartmentPlugin::createCompartmentReference()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiCompartmentPlugin.cpp:587:5: note: in expansion of macro 'MULTI_CREATE_NS' 587 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'RenderCubicBezier* ListOfCurveElements::createCubicBezier()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:328:5: note: in expansion of macro 'RENDER_CREATE_NS' 328 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'virtual SBase* ListOfCurveElements::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:417:3: note: in expansion of macro 'RENDER_CREATE_NS' 417 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.h:51, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp: In member function 'virtual SBase* MultiListOfReactionsPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiListOfReactionsPlugin.cpp:136:8: note: in expansion of macro 'MULTI_CREATE_NS' 136 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.h:75, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Image* ListOfDrawables::createImage()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:265:5: note: in expansion of macro 'RENDER_CREATE_NS' 265 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Ellipse* ListOfDrawables::createEllipse()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:293:5: note: in expansion of macro 'RENDER_CREATE_NS' 293 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Rectangle* ListOfDrawables::createRectangle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:321:5: note: in expansion of macro 'RENDER_CREATE_NS' 321 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Polygon* ListOfDrawables::createPolygon()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:349:5: note: in expansion of macro 'RENDER_CREATE_NS' 349 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderGroup* ListOfDrawables::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:377:5: note: in expansion of macro 'RENDER_CREATE_NS' 377 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'LineEnding* ListOfDrawables::createLineEnding()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:405:5: note: in expansion of macro 'RENDER_CREATE_NS' 405 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Text* ListOfDrawables::createText()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:433:5: note: in expansion of macro 'RENDER_CREATE_NS' 433 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderCurve* ListOfDrawables::createCurve()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:461:5: note: in expansion of macro 'RENDER_CREATE_NS' 461 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'virtual SBase* ListOfDrawables::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:521:3: note: in expansion of macro 'RENDER_CREATE_NS' 521 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.h:54, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'virtual SBase* MultiModelPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:132:7: note: in expansion of macro 'MULTI_CREATE_NS' 132 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'MultiSpeciesType* MultiModelPlugin::createMultiSpeciesType()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:325:5: note: in expansion of macro 'MULTI_CREATE_NS' 325 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'BindingSiteSpeciesType* MultiModelPlugin::createBindingSiteSpeciesType()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:352:5: note: in expansion of macro 'MULTI_CREATE_NS' 352 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp: In member function 'IntraSpeciesReaction* MultiModelPlugin::createIntraSpeciesReaction()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiModelPlugin.cpp:408:4: note: in expansion of macro 'MULTI_CREATE_NS' 408 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'DefaultValues* ListOfGlobalRenderInformation::createDefaultValues()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:429:3: note: in expansion of macro 'RENDER_CREATE_NS' 429 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'GlobalRenderInformation* ListOfGlobalRenderInformation::createGlobalRenderInformation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:609:5: note: in expansion of macro 'RENDER_CREATE_NS' 609 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual SBase* ListOfGlobalRenderInformation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:844:3: note: in expansion of macro 'RENDER_CREATE_NS' 844 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'ListOfGlobalRenderInformation::readAttributes(XMLAttributes const&, ExpectedAttributes const&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:966:40: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] 966 | if (log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 25%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'GlobalStyle* ListOfGlobalStyles::createGlobalStyle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:287:5: note: in expansion of macro 'RENDER_CREATE_NS' 287 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'virtual SBase* ListOfGlobalStyles::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:352:3: note: in expansion of macro 'RENDER_CREATE_NS' 352 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSimpleSpeciesReferencePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.cpp:129:5: note: in expansion of macro 'MULTI_CREATE_NS' 129 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:38: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'LinearGradient* ListOfGradientDefinitions::createLinearGradient()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:310:5: note: in expansion of macro 'RENDER_CREATE_NS' 310 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'RadialGradient* ListOfGradientDefinitions::createRadialGradient()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:339:5: note: in expansion of macro 'RENDER_CREATE_NS' 339 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'virtual SBase* ListOfGradientDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:399:3: note: in expansion of macro 'RENDER_CREATE_NS' 399 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.h:58, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'virtual SBase* MultiSpeciesPlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:137:5: note: in expansion of macro 'MULTI_CREATE_NS' 137 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'OutwardBindingSite* MultiSpeciesPlugin::createOutwardBindingSite()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:484:5: note: in expansion of macro 'MULTI_CREATE_NS' 484 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SpeciesFeature* MultiSpeciesPlugin::createSpeciesFeature()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:637:5: note: in expansion of macro 'MULTI_CREATE_NS' 637 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp: In member function 'SubListOfSpeciesFeatures* MultiSpeciesPlugin::createSubListOfSpeciesFeatures()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesPlugin.cpp:739:5: note: in expansion of macro 'MULTI_CREATE_NS' 739 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.h:84, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'GradientStop* ListOfGradientStops::createGradientStop()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:308:5: note: in expansion of macro 'RENDER_CREATE_NS' 308 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'virtual SBase* ListOfGradientStops::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:368:3: note: in expansion of macro 'RENDER_CREATE_NS' 368 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSimpleSpeciesReferencePlugin.h:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.h:56, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'virtual SBase* MultiSpeciesReferencePlugin::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:128:5: note: in expansion of macro 'MULTI_CREATE_NS' 128 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp: In member function 'SpeciesTypeComponentMapInProduct* MultiSpeciesReferencePlugin::createSpeciesTypeComponentMapInProduct()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiSpeciesReferencePlugin.cpp:299:5: note: in expansion of macro 'MULTI_CREATE_NS' 299 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.h:72, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:38: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'LineEnding* ListOfLineEndings::createLineEnding()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:299:5: note: in expansion of macro 'RENDER_CREATE_NS' 299 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'virtual SBase* ListOfLineEndings::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:373:3: note: in expansion of macro 'RENDER_CREATE_NS' 373 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.h:72, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'DefaultValues* ListOfLocalRenderInformation::createDefaultValues()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:426:3: note: in expansion of macro 'RENDER_CREATE_NS' 426 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'LocalRenderInformation* ListOfLocalRenderInformation::createLocalRenderInformation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:590:5: note: in expansion of macro 'RENDER_CREATE_NS' 590 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual SBase* ListOfLocalRenderInformation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:794:3: note: in expansion of macro 'RENDER_CREATE_NS' 794 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'ListOfLocalRenderInformation::readAttributes(XMLAttributes const&, ExpectedAttributes const&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:916:40: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] 916 | if (log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/CompartmentReference.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp: In member function 'virtual SBase* ListOfCompartmentReferences::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/CompartmentReference.cpp:746:7: note: in expansion of macro 'MULTI_CREATE_NS' 746 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.h:71, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'LocalStyle* ListOfLocalStyles::createLocalStyle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:303:5: note: in expansion of macro 'RENDER_CREATE_NS' 303 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'virtual SBase* ListOfLocalStyles::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:368:3: note: in expansion of macro 'RENDER_CREATE_NS' 368 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createLocalStyle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:343:5: note: in expansion of macro 'RENDER_CREATE_NS' 343 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createStyle(const string&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:367:5: note: in expansion of macro 'RENDER_CREATE_NS' 367 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/LocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Polygon.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In constructor 'Polygon::Polygon(const XMLNode&, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:124:5: note: in expansion of macro 'RENDER_CREATE_NS' 124 | RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderPoint* Polygon::createPoint()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:425:5: note: in expansion of macro 'RENDER_CREATE_NS' 425 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderCubicBezier* Polygon::createCubicBezier()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:453:5: note: in expansion of macro 'RENDER_CREATE_NS' 453 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 26%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:76, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp: In member function 'virtual SBase* ListOfInSpeciesTypeBonds::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/InSpeciesTypeBond.cpp:846:5: note: in expansion of macro 'MULTI_CREATE_NS' 846 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RadialGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension 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CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/IntraSpeciesReaction.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Rectangle.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Rectangle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:65, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderPoint* RenderCurve::createPoint()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:477:5: note: in expansion of macro 'RENDER_CREATE_NS' 477 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderCubicBezier* RenderCurve::createCubicBezier()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:505:5: note: in expansion of macro 'RENDER_CREATE_NS' 505 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/MultiSpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.h:82, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesFeatureType* MultiSpeciesType::createSpeciesFeatureType()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:454:5: note: in expansion of macro 'MULTI_CREATE_NS' 454 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeInstance* MultiSpeciesType::createSpeciesTypeInstance()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:611:5: note: in expansion of macro 'MULTI_CREATE_NS' 611 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'SpeciesTypeComponentIndex* MultiSpeciesType::createSpeciesTypeComponentIndex()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:768:5: note: in expansion of macro 'MULTI_CREATE_NS' 768 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'InSpeciesTypeBond* MultiSpeciesType::createInSpeciesTypeBond()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:925:5: note: in expansion of macro 'MULTI_CREATE_NS' 925 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* MultiSpeciesType::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1182:7: note: in expansion of macro 'MULTI_CREATE_NS' 1182 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp: In member function 'virtual SBase* ListOfMultiSpeciesTypes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1630:5: note: in expansion of macro 'MULTI_CREATE_NS' 1630 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/MultiSpeciesType.cpp:1637:5: note: in expansion of macro 'MULTI_CREATE_NS' 1637 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderPoint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:76, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Image* RenderGroup::createImage()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1118:5: note: in expansion of macro 'RENDER_CREATE_NS' 1118 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Ellipse* RenderGroup::createEllipse()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1146:5: note: in expansion of macro 'RENDER_CREATE_NS' 1146 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Rectangle* RenderGroup::createRectangle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1174:5: note: in expansion of macro 'RENDER_CREATE_NS' 1174 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Polygon* RenderGroup::createPolygon()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1202:5: note: in expansion of macro 'RENDER_CREATE_NS' 1202 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderGroup* RenderGroup::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1230:5: note: in expansion of macro 'RENDER_CREATE_NS' 1230 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'LineEnding* RenderGroup::createLineEnding()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1258:5: note: in expansion of macro 'RENDER_CREATE_NS' 1258 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Text* RenderGroup::createText()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1286:5: note: in expansion of macro 'RENDER_CREATE_NS' 1286 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderCurve* RenderGroup::createCurve()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1314:5: note: in expansion of macro 'RENDER_CREATE_NS' 1314 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'void RenderGroup::importOldCurve(const XMLNode&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:2631:3: note: in expansion of macro 'RENDER_CREATE_NS' 2631 | RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'ColorDefinition* RenderInformationBase::createColorDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:738:5: note: in expansion of macro 'RENDER_CREATE_NS' 738 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LinearGradient* RenderInformationBase::createLinearGradientDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:900:5: note: in expansion of macro 'RENDER_CREATE_NS' 900 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'RadialGradient* RenderInformationBase::createRadialGradientDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:928:5: note: in expansion of macro 'RENDER_CREATE_NS' 928 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LineEnding* RenderInformationBase::createLineEnding()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:1090:5: note: in expansion of macro 'RENDER_CREATE_NS' 1090 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/OutwardBindingSite.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.h:142, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp: In member function 'virtual SBase* ListOfOutwardBindingSites::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/OutwardBindingSite.cpp:846:5: note: in expansion of macro 'MULTI_CREATE_NS' 846 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Transformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Style.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'RenderGroup* Style::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp:597:3: note: in expansion of macro 'RENDER_CREATE_NS' 597 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'virtual SBase* Style::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp:1269:3: note: in expansion of macro 'RENDER_CREATE_NS' 1269 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Text.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Text.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 27%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfPossibleSpeciesFeatureValues::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.cpp:744:5: note: in expansion of macro 'MULTI_CREATE_NS' 744 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util/RenderLayoutConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/util/RenderUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util/RenderUtilities.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeature.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.h:84, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'SpeciesFeatureValue* SpeciesFeature::createSpeciesFeatureValue()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:549:5: note: in expansion of macro 'MULTI_CREATE_NS' 549 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* SpeciesFeature::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:762:3: note: in expansion of macro 'MULTI_CREATE_NS' 762 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp: In member function 'virtual SBase* ListOfSpeciesFeatures::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1385:5: note: in expansion of macro 'MULTI_CREATE_NS' 1385 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeature.cpp:1392:5: note: in expansion of macro 'MULTI_CREATE_NS' 1392 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o -MF CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o.d -o CMakeFiles/sbml.dir/sbml/annotation/CVTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/CVTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:77, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'PossibleSpeciesFeatureValue* SpeciesFeatureType::createPossibleSpeciesFeatureValue()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:432:5: note: in expansion of macro 'MULTI_CREATE_NS' 432 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* SpeciesFeatureType::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:623:3: note: in expansion of macro 'MULTI_CREATE_NS' 623 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureTypes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureType.cpp:1004:5: note: in expansion of macro 'MULTI_CREATE_NS' 1004 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 28%] Building CXX object src/CMakeFiles/sbml.dir/sbml/packages/render/validator/RenderValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp: In member function 'Date::parseDateNumbersToString()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:463:29: warning: '%u' directive output may be truncated writing between 2 and 10 bytes into a region of size between 0 and 8 [-Wformat-truncation=] 463 | snprintf(cdate, 10, "%u-%u-", mYear, mMonth); | ^~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:463:25: note: directive argument in the range [10, 4294967295] 463 | snprintf(cdate, 10, "%u-%u-", mYear, mMonth); | ^~~~~~~~ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 6 and 23 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:469:28: warning: 'T' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 469 | snprintf(cdate, 10, "%uT", mDay); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 4 and 12 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:475:28: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 475 | snprintf(cdate, 10, "%u:", mHour); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 4 and 12 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:481:28: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 481 | snprintf(cdate, 10, "%u:", mMinute); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 4 and 12 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:487:28: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 487 | snprintf(cdate, 10, "%u", mSecond); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 3 and 11 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:506:30: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 506 | snprintf(cdate, 10, "%u:", mHoursOffset); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 4 and 12 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:512:30: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 512 | snprintf(cdate, 10, "%u", mMinutesOffset); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 3 and 11 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:69, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp: In member function 'virtual SBase* ListOfSpeciesFeatureValues::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesFeatureValue.cpp:591:5: note: in expansion of macro 'MULTI_CREATE_NS' 591 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/ModelHistory.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o -MF CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o.d -o CMakeFiles/sbml.dir/sbml/common/operationReturnValues.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/common/operationReturnValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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-MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:75, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentIndexes::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.cpp:865:5: note: in expansion of macro 'MULTI_CREATE_NS' 865 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/ConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/ConversionOption.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:75, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp: In member function 'virtual SBase* ListOfSpeciesTypeComponentMapInProducts::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.cpp:934:5: note: in expansion of macro 'MULTI_CREATE_NS' 934 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 29%] Building CXX object src/CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o -MF CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o.d -o CMakeFiles/sbml.dir/sbml/annotation/RDFAnnotationParser.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/RDFAnnotationParser.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:79, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp: In member function 'virtual SBase* ListOfSpeciesTypeInstances::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SpeciesTypeInstance.cpp:859:5: note: in expansion of macro 'MULTI_CREATE_NS' 859 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.h:118, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:35: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'SpeciesFeature* SubListOfSpeciesFeatures::createSpeciesFeature()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:275:5: note: in expansion of macro 'MULTI_CREATE_NS' 275 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp: In member function 'virtual SBase* SubListOfSpeciesFeatures::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/MultiExtension.h:77:5: note: in expansion of macro 'EXTENSION_CREATE_NS' 77 | EXTENSION_CREATE_NS(MultiPkgNamespaces, variable, sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml/SubListOfSpeciesFeatures.cpp:487:5: note: in expansion of macro 'MULTI_CREATE_NS' 487 | MULTI_CREATE_NS(multins, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/ConversionProperties.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/ConversionProperties.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator 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src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/MultiIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiMathMLConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/MultiValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/MultiIdentifierConsistencyConstraints.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathCiCheckRepresentationType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 30%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLConverterRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLConverterRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/MultiMathCiCheckSpeciesReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/MultiMathMLConsistencyConstraints.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/UniqueMultiIdBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSFTIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints/UniqueSLOSFIdsWithinSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTCIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSTIIdsWithinMultiSpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 31%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/multi/validator/constraints/UniqueSpeciesFeatureIdsWithinSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS 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-MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLInitialAssignmentConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src 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CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/extension/QualModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.h:63, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'QualitativeSpecies* QualModelPlugin::createQualitativeSpecies()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:839:5: note: in expansion of macro 'QUAL_CREATE_NS' 839 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp: In member function 'Transition* QualModelPlugin::createTransition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualModelPlugin.cpp:1021:5: note: in expansion of macro 'QUAL_CREATE_NS' 1021 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common 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src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/DefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/DefaultTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLLevel1Version1Converter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/FunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.h:77, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'DefaultTerm* ListOfFunctionTerms::createDefaultTerm()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1072:5: note: in expansion of macro 'QUAL_CREATE_NS' 1072 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp: In member function 'virtual SBase* ListOfFunctionTerms::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/FunctionTerm.cpp:1129:3: note: in expansion of macro 'QUAL_CREATE_NS' 1129 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Input.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Input.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Input.h:107, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Input.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Input.cpp: In member function 'virtual SBase* ListOfInputs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Input.cpp:1342:5: note: in expansion of macro 'QUAL_CREATE_NS' 1342 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLLevelVersionConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Output.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Output.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Output.h:98, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Output.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Output.cpp: In member function 'virtual SBase* ListOfOutputs::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Output.cpp:1245:5: note: in expansion of macro 'QUAL_CREATE_NS' 1245 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLLocalParameterConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/QualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.h:89, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp: In member function 'virtual SBase* ListOfQualitativeSpecies::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/QualitativeSpecies.cpp:1338:5: note: in expansion of macro 'QUAL_CREATE_NS' 1338 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/sbml/Transition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.h:91, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Input* Transition::createInput()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:460:5: note: in expansion of macro 'QUAL_CREATE_NS' 460 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'Output* Transition::createOutput()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:644:5: note: in expansion of macro 'QUAL_CREATE_NS' 644 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'FunctionTerm* Transition::createFunctionTerm()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:802:5: note: in expansion of macro 'QUAL_CREATE_NS' 802 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp: In member function 'virtual SBase* ListOfTransitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/QualExtension.h:74:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 74 | EXTENSION_CREATE_NS(QualPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/Transition.cpp:1771:5: note: in expansion of macro 'QUAL_CREATE_NS' 1771 | QUAL_CREATE_NS(qualns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 32%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/QualConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 33%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/QualIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints/QualUniqueModelWideIds.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints/ResultExceedsMaximum.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderGraphicalObjectPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderLayoutPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:37: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp: In member function 'LocalRenderInformation* RenderLayoutPlugin::createLocalRenderInformation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderLayoutPlugin.cpp:450:5: note: in expansion of macro 'RENDER_CREATE_NS' 450 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLRuleConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLRuleConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:37: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp: In member function 'GlobalRenderInformation* RenderListOfLayoutsPlugin::createGlobalRenderInformation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderListOfLayoutsPlugin.cpp:713:5: note: in expansion of macro 'RENDER_CREATE_NS' 713 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderSBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common 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make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ColorDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o cd 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Ellipse.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Ellipse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -MF CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/conversion/SBMLUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLUnitsConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.h:72, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp: In member function 'GlobalStyle* GlobalRenderInformation::createGlobalStyle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalRenderInformation.cpp:369:5: note: in expansion of macro 'RENDER_CREATE_NS' 369 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 34%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/DefaultValues.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/DefaultValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER 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CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GlobalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/ASTBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.h: In copy constructor 'ASTBasePlugin::ASTBasePlugin(const ASTBasePlugin&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.h:487:24: warning: 'ASTBasePlugin::mExtendedMathType' will be initialized after [-Wreorder] 487 | ExtendedMathType_t mExtendedMathType; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.h:486:34: warning: 'std::vector ASTBasePlugin::mPkgASTNodeValues' [-Wreorder] 486 | std::vector mPkgASTNodeValues; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.cpp:314:1: warning: when initialized here [-Wreorder] 314 | ASTBasePlugin::ASTBasePlugin(const ASTBasePlugin& orig) | ^~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.h:102, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp: In member function 'GradientStop* GradientBase::createGradientStop()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GradientBase.cpp:569:5: note: in expansion of macro 'RENDER_CREATE_NS' 569 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp: In member function 'GraphicalPrimitive1D::readAttributes(XMLAttributes const&, ExpectedAttributes const&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.cpp:1167:47: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] 1167 | if (log && log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.h:77, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'RenderGroup* LineEnding::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:535:3: note: in expansion of macro 'RENDER_CREATE_NS' 535 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'BoundingBox* LineEnding::createBoundingBox()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:561:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 561 | LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp: In member function 'virtual SBase* LineEnding::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1315:3: note: in expansion of macro 'RENDER_CREATE_NS' 1315 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:75:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 75 | EXTENSION_CREATE_NS(LayoutPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LineEnding.cpp:1317:3: note: in expansion of macro 'LAYOUT_CREATE_NS' 1317 | LAYOUT_CREATE_NS(layoutns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LinearGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfColorDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.h:66, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:38: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'ColorDefinition* ListOfColorDefinitions::createColorDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:299:5: note: in expansion of macro 'RENDER_CREATE_NS' 299 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp: In member function 'virtual SBase* ListOfColorDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfColorDefinitions.cpp:371:3: note: in expansion of macro 'RENDER_CREATE_NS' 371 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common 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-MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionException.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtensionException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfCurveElements.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'RenderCubicBezier* ListOfCurveElements::createCubicBezier()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:328:5: note: in expansion of macro 'RENDER_CREATE_NS' 328 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp: In member function 'virtual SBase* ListOfCurveElements::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfCurveElements.cpp:417:3: note: in expansion of macro 'RENDER_CREATE_NS' 417 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfDrawables.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.h:75, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Image* ListOfDrawables::createImage()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:265:5: note: in expansion of macro 'RENDER_CREATE_NS' 265 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Ellipse* ListOfDrawables::createEllipse()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:293:5: note: in expansion of macro 'RENDER_CREATE_NS' 293 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Rectangle* ListOfDrawables::createRectangle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:321:5: note: in expansion of macro 'RENDER_CREATE_NS' 321 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Polygon* ListOfDrawables::createPolygon()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:349:5: note: in expansion of macro 'RENDER_CREATE_NS' 349 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderGroup* ListOfDrawables::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:377:5: note: in expansion of macro 'RENDER_CREATE_NS' 377 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'LineEnding* ListOfDrawables::createLineEnding()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:405:5: note: in expansion of macro 'RENDER_CREATE_NS' 405 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'Text* ListOfDrawables::createText()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:433:5: note: in expansion of macro 'RENDER_CREATE_NS' 433 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'RenderCurve* ListOfDrawables::createCurve()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:461:5: note: in expansion of macro 'RENDER_CREATE_NS' 461 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp: In member function 'virtual SBase* ListOfDrawables::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfDrawables.cpp:521:3: note: in expansion of macro 'RENDER_CREATE_NS' 521 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 36%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtensionNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'DefaultValues* ListOfGlobalRenderInformation::createDefaultValues()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:429:3: note: in expansion of macro 'RENDER_CREATE_NS' 429 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'GlobalRenderInformation* ListOfGlobalRenderInformation::createGlobalRenderInformation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:609:5: note: in expansion of macro 'RENDER_CREATE_NS' 609 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'virtual SBase* ListOfGlobalRenderInformation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:844:3: note: in expansion of macro 'RENDER_CREATE_NS' 844 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp: In member function 'ListOfGlobalRenderInformation::readAttributes(XMLAttributes const&, ExpectedAttributes const&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalRenderInformation.cpp:966:40: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] 966 | if (log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGlobalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'GlobalStyle* ListOfGlobalStyles::createGlobalStyle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:287:5: note: in expansion of macro 'RENDER_CREATE_NS' 287 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp: In member function 'virtual SBase* ListOfGlobalStyles::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGlobalStyles.cpp:352:3: note: in expansion of macro 'RENDER_CREATE_NS' 352 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.h:70, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:38: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'LinearGradient* ListOfGradientDefinitions::createLinearGradient()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:310:5: note: in expansion of macro 'RENDER_CREATE_NS' 310 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'RadialGradient* ListOfGradientDefinitions::createRadialGradient()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:339:5: note: in expansion of macro 'RENDER_CREATE_NS' 339 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp: In member function 'virtual SBase* ListOfGradientDefinitions::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientDefinitions.cpp:399:3: note: in expansion of macro 'RENDER_CREATE_NS' 399 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfGradientStops.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.h:84, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'GradientStop* ListOfGradientStops::createGradientStop()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:308:5: note: in expansion of macro 'RENDER_CREATE_NS' 308 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp: In member function 'virtual SBase* ListOfGradientStops::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfGradientStops.cpp:368:3: note: in expansion of macro 'RENDER_CREATE_NS' 368 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLineEndings.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.h:72, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:38: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'LineEnding* ListOfLineEndings::createLineEnding()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:299:5: note: in expansion of macro 'RENDER_CREATE_NS' 299 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp: In member function 'virtual SBase* ListOfLineEndings::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLineEndings.cpp:373:3: note: in expansion of macro 'RENDER_CREATE_NS' 373 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp: In member function 'bool SBMLExtensionRegistry::setEnabled(const string&, bool)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtensionRegistry.cpp:368:42: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 368 | return (sbmlext) ? sbmlext->mIsEnabled = isEnabled : false; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBaseExtensionPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBaseExtensionPoint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalStyles.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.h:71, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'LocalStyle* ListOfLocalStyles::createLocalStyle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:303:5: note: in expansion of macro 'RENDER_CREATE_NS' 303 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp: In member function 'virtual SBase* ListOfLocalStyles::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalStyles.cpp:368:3: note: in expansion of macro 'RENDER_CREATE_NS' 368 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.h:72, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'DefaultValues* ListOfLocalRenderInformation::createDefaultValues()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:426:3: note: in expansion of macro 'RENDER_CREATE_NS' 426 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'LocalRenderInformation* ListOfLocalRenderInformation::createLocalRenderInformation()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:590:5: note: in expansion of macro 'RENDER_CREATE_NS' 590 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'virtual SBase* ListOfLocalRenderInformation::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:794:3: note: in expansion of macro 'RENDER_CREATE_NS' 794 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp: In member function 'ListOfLocalRenderInformation::readAttributes(XMLAttributes const&, ExpectedAttributes const&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/ListOfLocalRenderInformation.cpp:916:40: warning: 'numErrs' may be used uninitialized in this function [-Wmaybe-uninitialized] 916 | if (log->getNumErrors() == numErrs + 1 && | ~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createLocalStyle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:343:5: note: in expansion of macro 'RENDER_CREATE_NS' 343 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp: In member function 'LocalStyle* LocalRenderInformation::createStyle(const string&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalRenderInformation.cpp:367:5: note: in expansion of macro 'RENDER_CREATE_NS' 367 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common 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-MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBasePlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/LocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/LocalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Polygon.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In constructor 'Polygon::Polygon(const XMLNode&, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:124:5: note: in expansion of macro 'RENDER_CREATE_NS' 124 | RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderPoint* Polygon::createPoint()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:425:5: note: in expansion of macro 'RENDER_CREATE_NS' 425 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp: In member function 'RenderCubicBezier* Polygon::createCubicBezier()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Polygon.cpp:453:5: note: in expansion of macro 'RENDER_CREATE_NS' 453 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/extension/SBasePluginCreatorBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBasePluginCreatorBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH 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make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o -MF CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o.d -o CMakeFiles/sbml.dir/sbml/AlgebraicRule.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AlgebraicRule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AlgebraicRule.cpp:410:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 410 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AlgebraicRule.cpp:426:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 426 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 37%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Rectangle.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Rectangle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o -MF CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o.d -o CMakeFiles/sbml.dir/sbml/AssignmentRule.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AssignmentRule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AssignmentRule.cpp:534:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 534 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AssignmentRule.cpp:550:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 550 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/extension/LayoutExtension.h:68, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Dimensions.h:65, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/Layout.h:67, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/util/LayoutAnnotation.h:49, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderPoint* RenderCurve::createPoint()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:477:5: note: in expansion of macro 'RENDER_CREATE_NS' 477 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp: In member function 'RenderCubicBezier* RenderCurve::createCubicBezier()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCurve.cpp:505:5: note: in expansion of macro 'RENDER_CREATE_NS' 505 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderCubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Compartment.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/Compartment.cpp.o -MF CMakeFiles/sbml.dir/sbml/Compartment.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Compartment.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Compartment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Compartment.cpp:2124:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2124 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Compartment.cpp:2140:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2140 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderPoint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.h:78, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'ColorDefinition* RenderInformationBase::createColorDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:738:5: note: in expansion of macro 'RENDER_CREATE_NS' 738 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LinearGradient* RenderInformationBase::createLinearGradientDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:900:5: note: in expansion of macro 'RENDER_CREATE_NS' 900 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'RadialGradient* RenderInformationBase::createRadialGradientDefinition()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:928:5: note: in expansion of macro 'RENDER_CREATE_NS' 928 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp: In member function 'LineEnding* RenderInformationBase::createLineEnding()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderInformationBase.cpp:1090:5: note: in expansion of macro 'RENDER_CREATE_NS' 1090 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/RenderGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive1D.h:64, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/GraphicalPrimitive2D.h:71, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.h:76, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Image* RenderGroup::createImage()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1118:5: note: in expansion of macro 'RENDER_CREATE_NS' 1118 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Ellipse* RenderGroup::createEllipse()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1146:5: note: in expansion of macro 'RENDER_CREATE_NS' 1146 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Rectangle* RenderGroup::createRectangle()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1174:5: note: in expansion of macro 'RENDER_CREATE_NS' 1174 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Polygon* RenderGroup::createPolygon()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1202:5: note: in expansion of macro 'RENDER_CREATE_NS' 1202 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderGroup* RenderGroup::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1230:5: note: in expansion of macro 'RENDER_CREATE_NS' 1230 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'LineEnding* RenderGroup::createLineEnding()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1258:5: note: in expansion of macro 'RENDER_CREATE_NS' 1258 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'Text* RenderGroup::createText()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) |make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1286:5: note: in expansion of macro 'RENDER_CREATE_NS' 1286 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'RenderCurve* RenderGroup::createCurve()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:1314:5: note: in expansion of macro 'RENDER_CREATE_NS' 1314 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp: In member function 'void RenderGroup::importOldCurve(const XMLNode&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/RenderGroup.cpp:2631:3: note: in expansion of macro 'RENDER_CREATE_NS' 2631 | RENDER_CREATE_NS(renderns, this->getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o -MF CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o.d -o CMakeFiles/sbml.dir/sbml/CompartmentType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/CompartmentType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/CompartmentType.cpp:885:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 885 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/CompartmentType.cpp:901:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 901 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Transformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Style.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:60, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.h:73, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp:43: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'RenderGroup* Style::createGroup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp:597:3: note: in expansion of macro 'RENDER_CREATE_NS' 597 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp: In member function 'virtual SBase* Style::createObject(XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:121:32: warning: catching polymorphic type 'class SBMLExtensionException' by value [-Wcatch-value=] 121 | catch (SBMLExtensionException e)\ | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLExtension.h:137:3: note: in expansion of macro 'EXTENSION_CREATE_NS_WITH_VERSION' 137 | EXTENSION_CREATE_NS_WITH_VERSION(type,variable,sbmlns,1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension/RenderExtension.h:66:3: note: in expansion of macro 'EXTENSION_CREATE_NS' 66 | EXTENSION_CREATE_NS(RenderPkgNamespaces,variable,sbmlns); | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Style.cpp:1269:3: note: in expansion of macro 'RENDER_CREATE_NS' 1269 | RENDER_CREATE_NS(renderns, getSBMLNamespaces()); | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Constraint.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/Constraint.cpp.o -MF CMakeFiles/sbml.dir/sbml/Constraint.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Constraint.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Constraint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Constraint.cpp:1145:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1145 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Constraint.cpp:1161:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1161 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Text.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Text.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/sbml/Transformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/Transformation2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common 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src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderLayoutConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util/RenderLayoutConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Delay.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Delay.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Delay.cpp:893:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 893 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Delay.cpp:909:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 909 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/RenderConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/util/RenderUtilities.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util/RenderUtilities.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP 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src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/RenderIdentifierConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/CVTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp: In member function 'Date::parseDateNumbersToString()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:463:29: warning: '%u' directive output may be truncated writing between 2 and 10 bytes into a region of size between 0 and 8 [-Wformat-truncation=] 463 | snprintf(cdate, 10, "%u-%u-", mYear, mMonth); | ^~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:463:25: note: directive argument in the range [10, 4294967295] 463 | snprintf(cdate, 10, "%u-%u-", mYear, mMonth); | ^~~~~~~~ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 6 and 23 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:469:28: warning: 'T' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 469 | snprintf(cdate, 10, "%uT", mDay); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 4 and 12 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:475:28: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 475 | snprintf(cdate, 10, "%u:", mHour); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 4 and 12 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:481:28: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 481 | snprintf(cdate, 10, "%u:", mMinute); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 4 and 12 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:487:28: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 487 | snprintf(cdate, 10, "%u", mSecond); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 3 and 11 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:506:30: warning: ':' directive output may be truncated writing 1 byte into a region of size between 0 and 8 [-Wformat-truncation=] 506 | snprintf(cdate, 10, "%u:", mHoursOffset); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 4 and 12 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:512:30: warning: '__snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=] 512 | snprintf(cdate, 10, "%u", mMinutesOffset); | ^ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLAttributes.h:243, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLToken.h:126, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.h:160, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.h:193, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/Date.cpp:39: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 3 and 11 bytes into a destination of size 10 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Event.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/Event.cpp.o -MF CMakeFiles/sbml.dir/sbml/Event.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Event.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Event.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Event.cpp:2390:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2390 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Event.cpp:2406:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2406 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/render/validator/RenderValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/common/operationReturnValues.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o -MF CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o.d -o CMakeFiles/sbml.dir/sbml/EventAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/EventAssignment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/EventAssignment.cpp:1298:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1298 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/EventAssignment.cpp:1314:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1314 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/RegisterConverters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT 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make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o -MF CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o.d -o CMakeFiles/sbml.dir/sbml/FunctionDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/FunctionDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/FunctionDefinition.cpp:1370:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1370 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/FunctionDefinition.cpp:1386:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1386 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLIdConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o -MF CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o.d -o CMakeFiles/sbml.dir/sbml/InitialAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/InitialAssignment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/InitialAssignment.cpp:1280:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1280 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/InitialAssignment.cpp:1296:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1296 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common 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CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLLocalParameterConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLLevelVersionConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLRateOfConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLReactionConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o -MF CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o.d -o CMakeFiles/sbml.dir/sbml/KineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/KineticLaw.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/KineticLaw.cpp:2076:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2076 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/KineticLaw.cpp:2092:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2092 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/conversion/SBMLStripPackageConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/SBMLStripPackageConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/ListOf.cpp.o -MF CMakeFiles/sbml.dir/sbml/ListOf.cpp.o.d -o CMakeFiles/sbml.dir/sbml/ListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ListOf.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.h: In copy constructor 'ASTBasePlugin::ASTBasePlugin(const ASTBasePlugin&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.h:487:24: warning: 'ASTBasePlugin::mExtendedMathType' will be initialized after [-Wreorder] 487 | ExtendedMathType_t mExtendedMathType; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.h:486:34: warning: 'std::vector ASTBasePlugin::mPkgASTNodeValues' [-Wreorder] 486 | std::vector mPkgASTNodeValues; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ASTBasePlugin.cpp:314:1: warning: when initialized here [-Wreorder] 314 | ASTBasePlugin::ASTBasePlugin(const ASTBasePlugin& orig) | ^~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/ISBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/ISBMLExtensionNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o -MF CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/LocalParameter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/LocalParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/LocalParameter.cpp:837:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 837 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/LocalParameter.cpp:853:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 853 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLDocumentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/extension/SBMLDocumentPluginNotRequired.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/SBMLDocumentPluginNotRequired.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBMLExtensionException.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ 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parentheses around assignment used as truth value [-Wparentheses] 368 | return (sbmlext) ? sbmlext->mIsEnabled = isEnabled : false; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common 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make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/extension/SBasePlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/AlgebraicRule.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AlgebraicRule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AlgebraicRule.cpp:410:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 410 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AlgebraicRule.cpp: In function 'AlgebraicRule_t* AlgebraicRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AlgebraicRule.cpp:426:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 426 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/AssignmentRule.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AssignmentRule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AssignmentRule.cpp:534:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 534 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AssignmentRule.cpp: In function 'AssignmentRule_t* AssignmentRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/AssignmentRule.cpp:550:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 550 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 42%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Model.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/Model.cpp.o -MF CMakeFiles/sbml.dir/sbml/Model.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Model.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Model.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Model.cpp:7433:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 7433 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Model.cpp:7449:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 7449 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Compartment.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Compartment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Compartment.cpp:2124:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2124 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Compartment.cpp: In function 'Compartment_t* Compartment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Compartment.cpp:2140:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2140 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/CompartmentType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/CompartmentType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/CompartmentType.cpp:885:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 885 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/CompartmentType.cpp: In function 'CompartmentType_t* CompartmentType_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/CompartmentType.cpp:901:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 901 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Constraint.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Constraint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Constraint.cpp:1145:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1145 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Constraint.cpp: In function 'Constraint_t* Constraint_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Constraint.cpp:1161:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1161 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o -MF CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o.d -o CMakeFiles/sbml.dir/sbml/ModifierSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ModifierSpeciesReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ModifierSpeciesReference.cpp:440:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 440 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ModifierSpeciesReference.cpp:456:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 456 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Delay.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Delay.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Delay.cpp:893:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 893 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Delay.cpp: In function 'Delay_t* Delay_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Delay.cpp:909:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 909 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/EventAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/EventAssignment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/EventAssignment.cpp:1298:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1298 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/EventAssignment.cpp: In function 'EventAssignment_t* EventAssignment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/EventAssignment.cpp:1314:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1314 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/ExpectedAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ExpectedAttributes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Event.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Event.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Event.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Event.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Event.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Event.cpp:2390:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2390 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Event.cpp: In function 'Event_t* Event_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Event.cpp:2406:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2406 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Priority.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/Priority.cpp.o -MF CMakeFiles/sbml.dir/sbml/Priority.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Priority.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Priority.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Priority.cpp:741:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 741 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Priority.cpp:757:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 757 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Parameter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/Parameter.cpp.o -MF CMakeFiles/sbml.dir/sbml/Parameter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Parameter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Parameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Parameter.cpp:2012:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2012 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Parameter.cpp:2028:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2028 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/FunctionDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/FunctionDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/FunctionDefinition.cpp:1370:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1370 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/FunctionDefinition.cpp: In function 'FunctionDefinition_t* FunctionDefinition_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/FunctionDefinition.cpp:1386:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1386 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/InitialAssignment.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/InitialAssignment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/InitialAssignment.cpp:1280:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1280 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/InitialAssignment.cpp: In function 'InitialAssignment_t* InitialAssignment_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/InitialAssignment.cpp:1296:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1296 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/RateRule.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/RateRule.cpp.o -MF CMakeFiles/sbml.dir/sbml/RateRule.cpp.o.d -o CMakeFiles/sbml.dir/sbml/RateRule.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/RateRule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/RateRule.cpp:532:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 532 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/RateRule.cpp:548:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 548 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/ListOf.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ListOf.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/KineticLaw.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/KineticLaw.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/KineticLaw.cpp:2076:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2076 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/KineticLaw.cpp: In function 'KineticLaw_t* KineticLaw_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/KineticLaw.cpp:2092:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2092 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 43%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Reaction.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/Reaction.cpp.o -MF CMakeFiles/sbml.dir/sbml/Reaction.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Reaction.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Reaction.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Reaction.cpp:2695:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2695 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Reaction.cpp:2711:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2711 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 44%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Rule.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/Rule.cpp.o -MF CMakeFiles/sbml.dir/sbml/Rule.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Rule.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraic(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1917:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1917 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraicWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1933:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1933 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignment(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1949:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1949 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignmentWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1965:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1965 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRate(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1981:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1981 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRateWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1997:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1997 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/LocalParameter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/LocalParameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/LocalParameter.cpp:837:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 837 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/LocalParameter.cpp: In function 'LocalParameter_t* LocalParameter_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/LocalParameter.cpp:853:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 853 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/ModifierSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ModifierSpeciesReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ModifierSpeciesReference.cpp:440:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 440 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ModifierSpeciesReference.cpp: In function 'ModifierSpeciesReference_t* ModifierSpeciesReference_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/ModifierSpeciesReference.cpp:456:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 456 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLConvert.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLConvert.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLDocument.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_create()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp:2312:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2312 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithLevelAndVersion(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp:2328:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2328 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithSBMLNamespaces(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp:2344:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2344 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 44%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Model.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Model.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Model.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Model.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Model.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Model.cpp:7433:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 7433 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Model.cpp: In function 'Model_t* Model_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Model.cpp:7449:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 7449 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Parameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Parameter.cpp:2012:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2012 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Parameter.cpp: In function 'Parameter_t* Parameter_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Parameter.cpp:2028:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2028 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension 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directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Priority.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Priority.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Priority.cpp:741:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 741 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Priority.cpp: In function 'Priority_t* Priority_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Priority.cpp:757:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 757 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/RateRule.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/RateRule.cpp /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/RateRule.cpp:532:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 532 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/RateRule.cpp: In function 'RateRule_t* RateRule_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/RateRule.cpp:548:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 548 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLReader.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLReader.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLTypeCodes.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLTypeCodes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Reaction.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Reaction.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Reaction.cpp:2695:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2695 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Reaction.cpp: In function 'Reaction_t* Reaction_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Reaction.cpp:2711:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2711 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Rule.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraic(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1917:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1917 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAlgebraicWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1933:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1933 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignment(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1949:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1949 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createAssignmentWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1965:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1965 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRate(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1981:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1981 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp: In function 'Rule_t* Rule_createRateWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Rule.cpp:1997:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1997 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBMLTransforms.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLTransforms.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 45%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBMLVisitor.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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src/CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLDocument.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_create()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp:2312:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2312 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithLevelAndVersion(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp:2328:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2328 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp: In function 'SBMLDocument_t* SBMLDocument_createWithSBMLNamespaces(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLDocument.cpp:2344:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2344 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLErrorLog.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLErrorLog.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLReader.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLReader.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 46%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Species.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI 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CMakeFiles/sbml.dir/sbml/Species.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Species.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Species.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Species.cpp:2683:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2683 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Species.cpp:2699:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2699 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 46%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/SBase.cpp.o -MF CMakeFiles/sbml.dir/sbml/SBase.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBase.cpp: In member function 'virtual void SBase::writeAttributes(XMLOutputStream&) const': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBase.cpp:5960:16: warning: unused variable 'pkgCoreVersion' [-Wunused-variable] 5960 | unsigned int pkgCoreVersion = getPackageCoreVersion(); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLTypeCodes.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLTypeCodes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLTransforms.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLTransforms.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLVisitor.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLVisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o -MF CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp:1976:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1976 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp:1992:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1992 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifier(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp:2008:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2008 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifierWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp:2024:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2024 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o -MF CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o.d -o CMakeFiles/sbml.dir/sbml/SpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesType.cpp:883:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 883 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesType.cpp:899:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 899 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBMLWriter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBMLWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/SyntaxChecker.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o -MF CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o.d -o CMakeFiles/sbml.dir/sbml/StoichiometryMath.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/StoichiometryMath.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/StoichiometryMath.cpp:647:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 647 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/StoichiometryMath.cpp:663:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 663 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBO.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBO.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Trigger.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/Trigger.cpp.o -MF CMakeFiles/sbml.dir/sbml/Trigger.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Trigger.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Trigger.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Trigger.cpp:1017:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1017 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Trigger.cpp:1033:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1033 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SimpleSpeciesReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/Unit.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/Unit.cpp.o -MF CMakeFiles/sbml.dir/sbml/Unit.cpp.o.d -o CMakeFiles/sbml.dir/sbml/Unit.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Unit.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Unit.cpp:2672:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2672 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Unit.cpp:2688:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2688 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building C object src/CMakeFiles/sbml.dir/sbml/UnitKind.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/gcc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/UnitKind.c.o -MF CMakeFiles/sbml.dir/sbml/UnitKind.c.o.d -o CMakeFiles/sbml.dir/sbml/UnitKind.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitKind.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o -MF CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o.d -o CMakeFiles/sbml.dir/sbml/UnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitDefinition.cpp:2443:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2443 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitDefinition.cpp:2459:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2459 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 48%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/DefinitionURLRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/math/DefinitionURLRegistry.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/DefinitionURLRegistry.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/DefinitionURLRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/DefinitionURLRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/DefinitionURLRegistry.cpp: In static member function 'static int DefinitionURLRegistry::addDefinitionURL(const string&, int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/DefinitionURLRegistry.cpp:82:30: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 82 | if (getNumDefinitionURLs() == n + 1) | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/DefinitionURLRegistry.cpp: In static member function 'static std::string DefinitionURLRegistry::getDefinitionUrlByIndex(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/DefinitionURLRegistry.cpp:106:11: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 106 | if (i == index) | ~~^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/ASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/ASTNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Species.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/Species.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/Species.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/Species.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Species.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Species.cpp:2683:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2683 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Species.cpp: In function 'Species_t* Species_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Species.cpp:2699:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2699 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 47%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBase.cpp: In member function 'virtual void SBase::writeAttributes(XMLOutputStream&) const': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SBase.cpp:5960:16: warning: unused variable 'pkgCoreVersion' [-Wunused-variable] 5960 | unsigned int pkgCoreVersion = getPackageCoreVersion(); | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 48%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/FormulaFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/FormulaFormatter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 48%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/FormulaParser.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SpeciesType.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesType.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesType.cpp:883:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 883 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesType.cpp: In function 'SpeciesType_t* SpeciesType_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesType.cpp:899:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 899 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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CMakeFiles/sbml.dir/sbml/math/L3FormulaFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/L3FormulaFormatter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 48%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SpeciesReference.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp:1976:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1976 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp:1992:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1992 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifier(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp:2008:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2008 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp: In function 'SpeciesReference_t* SpeciesReference_createModifierWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SpeciesReference.cpp:2024:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2024 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/StoichiometryMath.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/StoichiometryMath.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/StoichiometryMath.cpp:647:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 647 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/StoichiometryMath.cpp: In function 'StoichiometryMath_t* StoichiometryMath_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/StoichiometryMath.cpp:663:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 663 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/SyntaxChecker.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o -MF CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o.d -o CMakeFiles/sbml.dir/sbml/math/L3ParserSettings.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/L3ParserSettings.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/L3Parser.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Trigger.cpp:1017:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1017 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Trigger.cpp: In function 'Trigger_t* Trigger_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Trigger.cpp:1033:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 1033 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/FormulaUnitsData.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Unit.cpp:2672:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2672 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Unit.cpp: In function 'Unit_t* Unit_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/Unit.cpp:2688:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2688 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building C object src/CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/gcc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP 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src/CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o -MF CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o.d -o CMakeFiles/sbml-static.dir/sbml/UnitKind.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitKind.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/math/MathML.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp: In function 'bool isValidCSymbol(SBMLNamespaces*, ASTNodeType_t)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp:404:18: warning: unused variable 'version' [-Wunused-variable] 404 | unsigned int version = sbmlns->getVersion(); | ^~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp: In function 'void setTypeCI(ASTNode&, const XMLToken&, XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp:424:16: warning: unused variable 'n' [-Wunused-variable] 424 | unsigned int n = DefinitionURLRegistry::getInstance().getNumDefinitionURLs(); | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp: In function 'ASTNode* readMathML(XMLInputStream&, std::string, bool)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp:2174:21: warning: unused variable 'name' [-Wunused-variable] 2174 | const string& name = element1.getName(); | ^~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_create(unsigned int, unsigned int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitDefinition.cpp:2443:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2443 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitDefinition.cpp: In function 'UnitDefinition_t* UnitDefinition_createWithNS(SBMLNamespaces_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/UnitDefinition.cpp:2459:10: warning: catching polymorphic type 'class SBMLConstructorException' by value [-Wcatch-value=] 2459 | catch (SBMLConstructorException) | ^~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/units/UnitKindList.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o -MF CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o.d -o CMakeFiles/sbml.dir/sbml/util/ElementFilter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/ElementFilter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 49%] Building CXX object src/CMakeFiles/sbml.dir/sbml/util/CallbackRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/DefinitionURLRegistry.cpp: In static member function 'static int DefinitionURLRegistry::addDefinitionURL(const string&, int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/DefinitionURLRegistry.cpp:82:30: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 82 | if (getNumDefinitionURLs() == n + 1) | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/DefinitionURLRegistry.cpp: In static member function 'static std::string DefinitionURLRegistry::getDefinitionUrlByIndex(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/DefinitionURLRegistry.cpp:106:11: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 106 | if (i == index) | ~~^~~~~~~~ make[2]: Entering directory 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 51%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/ConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/ConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 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src/CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/math/MathML.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp: In function 'bool isValidCSymbol(SBMLNamespaces*, ASTNodeType_t)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp:404:18: warning: unused variable 'version' [-Wunused-variable] 404 | unsigned int version = sbmlns->getVersion(); | ^~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp: In function 'void setTypeCI(ASTNode&, const XMLToken&, XMLInputStream&)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp:424:16: warning: unused variable 'n' [-Wunused-variable] 424 | unsigned int n = DefinitionURLRegistry::getInstance().getNumDefinitionURLs(); | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp: In function 'ASTNode* readMathML(XMLInputStream&, std::string, bool)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/MathML.cpp:2174:21: warning: unused variable 'name' [-Wunused-variable] 2174 | const string& name = element1.getName(); | ^~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 52%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/units/UnitKindList.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src 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make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 57%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/UniqueVarsInRules.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/constraints/UniqueVarsInRules.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS 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src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/IdNameNewOnSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/constraints/IdNameNewOnSBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/UnitsBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawUnitsCheck.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/constraints/KineticLawUnitsCheck.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -MF CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o.d -o CMakeFiles/sbml.dir/sbml/validator/constraints/ValidCnUnitsValue.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/constraints/ValidCnUnitsValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 61%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/KineticLawVars.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/constraints/KineticLawVars.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 61%] Building CXX object src/CMakeFiles/sbml.dir/sbml/compress/InputDecompressor.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dsbml_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLOutputStream.cpp: In member function 'XMLOutputStream::writeComment(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, bool)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLOutputStream.cpp:997:44: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 5 and 15 [-Wformat-truncation=] 997 | snprintf(formattedDateAndTime, 17, "%d-%02d-%02d %02d:%02d", | ^~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLOutputStream.cpp:997:40: note: directive argument in the range [-2147483647, 2147483647] 997 | snprintf(formattedDateAndTime, 17, "%d-%02d-%02d %02d:%02d", | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /usr/include/c++/11/bits/locale_classes.h:40, from /usr/include/c++/11/bits/ios_base.h:41, from /usr/include/c++/11/ios:42, from /usr/include/c++/11/ostream:38, from /usr/include/c++/11/iostream:39, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLOutputStream.cpp:44: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 14 and 60 bytes into a destination of size 17 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 64%] Building CXX object src/CMakeFiles/sbml.dir/sbml/xml/XMLTriple.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS 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directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 64%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/NumericReturnMathCheck.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/SpeciesReactionOrRule.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/constraints/SpeciesReactionOrRule.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/validator/constraints/StoichiometryMathVars.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/constraints/StoichiometryMathVars.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 66%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/validator/constraints/UniqueIdsForUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 67%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/compress/zfstream.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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src/CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLOutputStream.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLOutputStream.cpp: In member function 'XMLOutputStream::writeComment(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, bool)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLOutputStream.cpp:997:44: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 5 and 15 [-Wformat-truncation=] 997 | snprintf(formattedDateAndTime, 17, "%d-%02d-%02d %02d:%02d", | ^~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLOutputStream.cpp:997:40: note: directive argument in the range [-2147483647, 2147483647] 997 | snprintf(formattedDateAndTime, 17, "%d-%02d-%02d %02d:%02d", | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:894, from /usr/include/c++/11/cstdio:42, from /usr/include/c++/11/ext/string_conversions.h:43, from /usr/include/c++/11/bits/basic_string.h:6606, from /usr/include/c++/11/string:55, from /usr/include/c++/11/bits/locale_classes.h:40, from /usr/include/c++/11/bits/ios_base.h:41, from /usr/include/c++/11/ios:42, from /usr/include/c++/11/ostream:38, from /usr/include/c++/11/iostream:39, from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLOutputStream.cpp:44: /usr/include/bits/stdio2.h:71:35: note: '__snprintf_chk' output between 14 and 60 bytes into a destination of size 17 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC 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src/CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o -MF CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o.d -o CMakeFiles/sbml-static.dir/sbml/xml/XMLTriple.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/XMLTriple.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 69%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/xml/XMLToken.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src 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src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestAttributeNamespaces.cpp.o -MF CMakeFiles/test_comp_sbase.dir/TestAttributeNamespaces.cpp.o.d -o CMakeFiles/test_comp_sbase.dir/TestAttributeNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestAttributeNamespaces.cpp /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestAttributeNamespaces.cpp: In function 'void test_comp_AttributeNamespaces_model_extraCompAtt_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestAttributeNamespaces.cpp:1129:17: warning: unused variable 'errors' [-Wunused-variable] 1129 | SBMLErrorLog* errors = doc->getErrorLog(); | ^~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 69%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects 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-DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o -MF CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o.d -o CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/test/TestMultipleNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -MF CMakeFiles/test_comp_extensions.dir/TestRunner.c.o.d -o CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o -MF CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o.d -o CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseObjects.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o -MF CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c: In function 'void DeletionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("Deletion_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c: In function 'void test_comp_deletion_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c:113:10: warning: too many arguments for format [-Wformat-extra-args] 113 | fail("Deletion_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c:123:10: warning: too many arguments for format [-Wformat-extra-args] 123 | fail("Deletion_unsetId(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c: In function 'void test_comp_deletion_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c:144:10: warning: too many arguments for format [-Wformat-extra-args] 144 | fail("Deletion_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c:154:10: warning: too many arguments for format [-Wformat-extra-args] 154 | fail("Deletion_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c: In function 'void test_comp_deletion_metaid_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c:175:10: warning: too many arguments for format [-Wformat-extra-args] 175 | fail("SBase_setMetaId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestDeletion.c:184:10: warning: too many arguments for format [-Wformat-extra-args] 184 | fail("Deletion_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningConverterStripPackage.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o -MF CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c: In function 'void ExternalModelDefinitionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("ExternalModelDefinition_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c: In function 'void test_comp_externalModelDefinition_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:117:10: warning: too many arguments for format [-Wformat-extra-args] 117 | fail("ExternalModelDefinition_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:127:10: warning: too many arguments for format [-Wformat-extra-args] 127 | fail("ExternalModelDefinition_unsetId(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c: In function 'void test_comp_externalModelDefinition_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:148:10: warning: too many arguments for format [-Wformat-extra-args] 148 | fail("ExternalModelDefinition_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:158:10: warning: too many arguments for format [-Wformat-extra-args] 158 | fail("ExternalModelDefinition_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c: In function 'void test_comp_externalModelDefinition_modelRef_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:179:10: warning: too many arguments for format [-Wformat-extra-args] 179 | fail("ExternalModelDefinition_setModelRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:189:10: warning: too many arguments for format [-Wformat-extra-args] 189 | fail("ExternalModelDefinition_unsetModelRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c: In function 'void test_comp_externalModelDefinition_source_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:210:10: warning: too many arguments for format [-Wformat-extra-args] 210 | fail("ExternalModelDefinition_setSource(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestExternalModelDefinition.c:220:10: warning: too many arguments for format [-Wformat-extra-args] 220 | fail("ExternalModelDefinition_unsetSource(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o -MF CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c: In function 'void ModelDefinitionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("ModelDefinition_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c: In function 'void test_comp_modelDefinition_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:108:10: warning: too many arguments for format [-Wformat-extra-args] 108 | fail("Model_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:117:10: warning: too many arguments for format [-Wformat-extra-args] 117 | fail("Model_unsetId(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c: In function 'void test_comp_modelDefinition_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("Model_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestModelDefinition.c:147:10: warning: too many arguments for format [-Wformat-extra-args] 147 | fail("Model_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestPort.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestPort.c.o -MF CMakeFiles/test_comp_sbase.dir/TestPort.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestPort.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c: In function 'void PortTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("Port_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c: In function 'void test_comp_port_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c:113:10: warning: too many arguments for format [-Wformat-extra-args] 113 | fail("Port_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c:123:10: warning: too many arguments for format [-Wformat-extra-args] 123 | fail("Port_unsetId(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c: In function 'void test_comp_port_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c:144:10: warning: too many arguments for format [-Wformat-extra-args] 144 | fail("Port_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestPort.c:154:10: warning: too many arguments for format [-Wformat-extra-args] 154 | fail("Port_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o -MF CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedBy.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedBy.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedBy.c: In function 'void ReplacedByTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedBy.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("ReplacedBy_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedBy.c: In function 'void test_comp_replacedBy_submodelRef_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedBy.c:111:10: warning: too many arguments for format [-Wformat-extra-args] 111 | fail("ReplacedBy_setSubmodelRef(...) submodelRef not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedBy.c:121:10: warning: too many arguments for format [-Wformat-extra-args] 121 | fail("ReplacedBy_unsetSubmodelRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o -MF CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c: In function 'void ReplacedElementTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("ReplacedElement_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c: In function 'void test_comp_replacedElement_submodelRef_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:115:10: warning: too many arguments for format [-Wformat-extra-args] 115 | fail("ReplacedElement_setSubmodelRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:125:10: warning: too many arguments for format [-Wformat-extra-args] 125 | fail("ReplacedElement_unsetSubmodelRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c: In function 'void test_comp_replacedElement_deletion_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:146:10: warning: too many arguments for format [-Wformat-extra-args] 146 | fail("ReplacedElement_setDeletion(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:156:10: warning: too many arguments for format [-Wformat-extra-args] 156 | fail("ReplacedElement_unsetDeletion(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c: In function 'void test_comp_replacedElement_conversionFactor_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:177:10: warning: too many arguments for format [-Wformat-extra-args] 177 | fail("ReplacedElement_setConversionFactor(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestReplacedElement.c:187:10: warning: too many arguments for format [-Wformat-extra-args] 187 | fail("ReplacedElement_unsetConversionFactor(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 71%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestRunner.c.o -MF CMakeFiles/test_comp_sbase.dir/TestRunner.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 71%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o -MF CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function 'void SBaseRefTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("SBaseRef_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function 'void test_comp_sBaseRef_idRef_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:119:10: warning: too many arguments for format [-Wformat-extra-args] 119 | fail("SBaseRef_setIdRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:129:10: warning: too many arguments for format [-Wformat-extra-args] 129 | fail("SBaseRef_unsetIdRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function 'void test_comp_sBaseRef_unitRef_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("SBaseRef_setUnitRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:160:10: warning: too many arguments for format [-Wformat-extra-args] 160 | fail("SBaseRef_unsetUnitRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function 'void test_comp_sBaseRef_metaIdRef_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:181:10: warning: too many arguments for format [-Wformat-extra-args] 181 | fail("SBaseRef_setMetaIdRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:191:10: warning: too many arguments for format [-Wformat-extra-args] 191 | fail("SBaseRef_unsetMetaIdRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function 'void test_comp_sBaseRef_portRef_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:212:10: warning: too many arguments for format [-Wformat-extra-args] 212 | fail("SBaseRef_setPortRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:222:10: warning: too many arguments for format [-Wformat-extra-args] 222 | fail("SBaseRef_unsetPortRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c: In function 'void test_comp_sBaseRef_sBaseRef_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:242:10: warning: too many arguments for format [-Wformat-extra-args] 242 | fail("SBaseRef_setSBaseRef(...) did not make a copy of the SBaseRef_t."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSBaseRef.c:251:10: warning: too many arguments for format [-Wformat-extra-args] 251 | fail("SBaseRef_unsetSBaseRef(P) did not clear the SBaseRef_t."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningErrorMessages.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 71%] Building CXX object src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -MF CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o.d -o CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function 'void SubmodelTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:65:10: warning: too many arguments for format [-Wformat-extra-args] 65 | fail("Submodel_create(3, 1, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function 'void test_comp_submodel_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:125:10: warning: too many arguments for format [-Wformat-extra-args] 125 | fail("Submodel_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:135:10: warning: too many arguments for format [-Wformat-extra-args] 135 | fail("Submodel_unsetId(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function 'void test_comp_submodel_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:156:10: warning: too many arguments for format [-Wformat-extra-args] 156 | fail("Submodel_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:166:10: warning: too many arguments for format [-Wformat-extra-args] 166 | fail("Submodel_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function 'void test_comp_submodel_modelRef_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:187:10: warning: too many arguments for format [-Wformat-extra-args] 187 | fail("Submodel_setModelRef(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:197:10: warning: too many arguments for format [-Wformat-extra-args] 197 | fail("Submodel_unsetModelRef(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function 'void test_comp_submodel_timeConversionFactor_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:235:10: warning: too many arguments for format [-Wformat-extra-args] 235 | fail("Submodel_setTimeConversionFactor(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:245:10: warning: too many arguments for format [-Wformat-extra-args] 245 | fail("Submodel_unsetTimeConversionFactor(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function 'void test_comp_submodel_extentConversionFactor_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:266:10: warning: too many arguments for format [-Wformat-extra-args] 266 | fail("Submodel_setExtentConversionFactor(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:276:10: warning: too many arguments for format [-Wformat-extra-args] 276 | fail("Submodel_unsetExtentConversionFactor(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c: In function 'void test_comp_submodel_deletion_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test/TestSubmodel.c:299:10: warning: too many arguments for format [-Wformat-extra-args] 299 | fail("Submodel_addDeletion(...) did not make a copy of the deletion."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 71%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningNewFlags.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 71%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/test/TestCompFlatteningUnknownPackageRefs.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 71%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o -MF CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/test/TestCompLevelVersionConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 71%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o -MF CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o.d -o CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/test/TestExternalModelResolving.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 71%] Building CXX object src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH 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CMakeFiles/sbml.dir/sbml/xml/LibXMLTranscode.cpp.o -lbz2 -lz -lminizip -lz -lxml2 cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src && /usr/bin/cmake -E cmake_symlink_library libsbml.so.5.19.0 libsbml.so.5 libsbml.so make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Built target sbml make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/test 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_comp_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_comp_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Building CXX object src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Linking CXX executable test_comp_extensions cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_extensions.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_comp_extensions.dir/TestCheckConsistency.cpp.o CMakeFiles/test_comp_extensions.dir/TestExtensionObjects.cpp.o CMakeFiles/test_comp_extensions.dir/TestMultipleNamespaces.cpp.o CMakeFiles/test_comp_extensions.dir/TestRunner.c.o -o test_comp_extensions ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Built target test_comp_extensions make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o -MF CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o.d -o CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp:13: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp: In function 'void FbcAssociationTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestFbcAssociation.cpp:60:10: warning: too many arguments for format [-Wformat-extra-args] 60 | fail("Failed to create a FbcAssociation object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o -MF CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o.d -o CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp:13: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp: In function 'void FbcExtensionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestFbcExtension.cpp:53:10: warning: too many arguments for format [-Wformat-extra-args] 53 | fail("Failed to create a FbcExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o -MF CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o.d -o CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestReadFbcExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o -MF CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o.d -o CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp:10: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp: In function 'void WriteFbcExtensionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestWriteFbcExtension.cpp:46:10: warning: too many arguments for format [-Wformat-extra-args] 46 | fail("Failed to create a FbcExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Building CXX object src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 71%] Linking CXX executable test_comp_sbase cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_sbase.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_comp_sbase.dir/TestAttributeNamespaces.cpp.o CMakeFiles/test_comp_sbase.dir/TestReadWriteSBase.cpp.o CMakeFiles/test_comp_sbase.dir/TestSBaseObjects.cpp.o CMakeFiles/test_comp_sbase.dir/TestDeletion.c.o CMakeFiles/test_comp_sbase.dir/TestExternalModelDefinition.c.o CMakeFiles/test_comp_sbase.dir/TestModelDefinition.c.o CMakeFiles/test_comp_sbase.dir/TestPort.c.o CMakeFiles/test_comp_sbase.dir/TestReplacedBy.c.o CMakeFiles/test_comp_sbase.dir/TestReplacedElement.c.o CMakeFiles/test_comp_sbase.dir/TestRunner.c.o CMakeFiles/test_comp_sbase.dir/TestSBaseRef.c.o CMakeFiles/test_comp_sbase.dir/TestSubmodel.c.o -o test_comp_sbase ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Built target test_comp_sbase make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o -MF CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o.d -o CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/test/TestFbcConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Linking CXX executable test_comp_util cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_util.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_comp_util.dir/TestCompFlatteningConverter.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningConverterStripPackage.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningErrorMessages.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningNewFlags.cpp.o CMakeFiles/test_comp_util.dir/TestCompFlatteningUnknownPackageRefs.cpp.o CMakeFiles/test_comp_util.dir/TestCompLevelVersionConverter.cpp.o CMakeFiles/test_comp_util.dir/TestExternalModelResolving.cpp.o CMakeFiles/test_comp_util.dir/TestURIResolvers.cpp.o CMakeFiles/test_comp_util.dir/TestRunner.c.o -o test_comp_util ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Built target test_comp_util make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Linking CXX executable test_comp_validator cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_comp_validator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_comp_validator.dir/TestCompConsistencyValidator.cpp.o CMakeFiles/test_comp_validator.dir/TestFile.cpp.o CMakeFiles/test_comp_validator.dir/TestValidator.cpp.o -o test_comp_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Built target test_comp_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o -MF CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o.d -o CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp:39: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp: In function 'void GroupsExtensionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestGroupsExtension.cpp:75:10: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("Failed to create a GroupsExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_groups_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_groups_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o -MF CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o.d -o CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/test/TestGroupsConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o -MF CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o.d -o CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestGroupsModelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o -MF CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o.d -o CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestReadGroupsExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o -MF CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o.d -o CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp:40: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp: In function 'void WriteGroupsExtensionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestWriteGroupsExtension.cpp:72:22: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("Failed to create a GroupsExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -MF CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o.d -o CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Linking CXX executable test_sbml_package_fbc cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_fbc.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_package_fbc.dir/TestFbcAssociation.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestReadFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestWriteFbcExtension.cpp.o CMakeFiles/test_sbml_package_fbc.dir/TestRunner.c.o -o test_sbml_package_fbc ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Built target test_sbml_package_fbc make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/build.make src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/build.make src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_l3v2extendedmath_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_l3v2extendedmath_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestL3v2MathConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestL3v2MathConsistencyValidator.cpp.o -MF CMakeFiles/test_l3v2extendedmath_validator.dir/TestL3v2MathConsistencyValidator.cpp.o.d -o CMakeFiles/test_l3v2extendedmath_validator.dir/TestL3v2MathConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/test/TestL3v2MathConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_l3v2extendedmath_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_l3v2extendedmath_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Linking CXX executable test_fbc_validator cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fbc_validator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_fbc_validator.dir/TestFbcConsistencyValidator.cpp.o CMakeFiles/test_fbc_validator.dir/TestFile.cpp.o CMakeFiles/test_fbc_validator.dir/TestValidator.cpp.o -o test_fbc_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Built target test_fbc_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/build.make src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/build.make src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Building CXX object src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestL3v2EMExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestL3v2EMExtension.cpp.o -MF CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestL3v2EMExtension.cpp.o.d -o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestL3v2EMExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestL3v2EMExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestL3v2EMExtension.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestL3v2EMExtension.cpp: In function 'void L3v2EMExtensionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestL3v2EMExtension.cpp:81:10: warning: too many arguments for format [-Wformat-extra-args] 81 | fail("Failed to create a L3v2extendedmathExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Building CXX object src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadL3v2EMExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadL3v2EMExtension.cpp.o -MF CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadL3v2EMExtension.cpp.o.d -o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadL3v2EMExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestReadL3v2EMExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Building CXX object src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadWriteInfix.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadWriteInfix.cpp.o -MF CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadWriteInfix.cpp.o.d -o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadWriteInfix.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestReadWriteInfix.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Building CXX object src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestWriteL3v2EMExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestWriteL3v2EMExtension.cpp.o -MF CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestWriteL3v2EMExtension.cpp.o.d -o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestWriteL3v2EMExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp: In function 'void WriteL3v2EMExtensionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:81:10: warning: too many arguments for format [-Wformat-extra-args] 81 | fail("Failed to create a L3v2extendedmathExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp: At global scope: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:469:13: warning: 'test_L3v2EMExtension_read_disable_via_sbmldocument_and_write_L3V1V1' defined but not used [-Wunused-variable] 469 | START_TEST (test_L3v2EMExtension_read_disable_via_sbmldocument_and_write_L3V1V1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:386:13: warning: 'test_L3v2EMExtension_read_enable_via_sbmldocument_and_write_L3V1V1' defined but not used [-Wunused-variable] 386 | START_TEST (test_L3v2EMExtension_read_enable_via_sbmldocument_and_write_L3V1V1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:309:13: warning: 'test_L3v2EMExtension_read_disable_via_model_and_write_L3V1V1' defined but not used [-Wunused-variable] 309 | START_TEST (test_L3v2EMExtension_read_disable_via_model_and_write_L3V1V1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestWriteL3v2EMExtension.cpp:225:13: warning: 'test_L3v2EMExtension_read_enable_via_model_and_write_L3V1V1' defined but not used [-Wunused-variable] 225 | START_TEST (test_L3v2EMExtension_read_enable_via_model_and_write_L3V1V1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Building CXX object src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestRunner.c.o -MF CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestRunner.c.o.d -o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Linking CXX executable test_groups_validator cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_groups_validator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_groups_validator.dir/TestFile.cpp.o CMakeFiles/test_groups_validator.dir/TestGroupsConsistencyValidator.cpp.o CMakeFiles/test_groups_validator.dir/TestValidator.cpp.o -o test_groups_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Built target test_groups_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp: In function 'void BoundingBoxTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestBoundingBox.cpp:60:10: warning: too many arguments for format [-Wformat-extra-args] 60 | fail("BoundingBox(); returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp:47: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp: In function 'void CompartmentGlyphTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCompartmentGlyph.cpp:64:10: warning: too many arguments for format [-Wformat-extra-args] 64 | fail("new(std::nothrow) CompartmentGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Linking CXX executable test_extension_package_groups cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_groups.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_extension_package_groups.dir/TestGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestGroupsModelPlugin.cpp.o CMakeFiles/test_extension_package_groups.dir/TestReadGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestWriteGroupsExtension.cpp.o CMakeFiles/test_extension_package_groups.dir/TestRunner.c.o -o test_extension_package_groups ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Built target test_extension_package_groups make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_layout_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_layout_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp:47: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp: In function 'void CubicBezierTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCubicBezier.cpp:63:10: warning: too many arguments for format [-Wformat-extra-args] 63 | fail("CubicBezier_create(); returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 75%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o -MF CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o.d -o CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/test/TestLayoutConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCurve.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCurve.cpp: In function 'void CurveTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestCurve.cpp:60:10: warning: too many arguments for format [-Wformat-extra-args] 60 | fail("Curve_create(); returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 75%] Building CXX object src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 75%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestDimensions.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestDimensions.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestDimensions.cpp: In function 'void DimensionsTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestDimensions.cpp:62:10: warning: too many arguments for format [-Wformat-extra-args] 62 | fail("new(std::nothrow)Dimensions() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp:52: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp: In function 'void GeneralGlyphTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestGeneralGlyph.cpp:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("new(std::nothrow) GeneralGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp:52: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp: In function 'void GraphicalObjectTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestGraphicalObject.cpp:71:10: warning: too many arguments for format [-Wformat-extra-args] 71 | fail("new (std::nothrow) GraphicalObject returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLayout.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLayout.cpp:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLayout.cpp: In function 'void LayoutTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLayout.cpp:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("new(std::nothrow) Layout() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutCreation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutFormatter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLayoutWriting.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp:47: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp: In function 'void LineSegmentTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestLineSegment.cpp:64:10: warning: too many arguments for format [-Wformat-extra-args] 64 | fail("LineSegment_create(); returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestPoint.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestPoint.cpp:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestPoint.cpp: In function 'void PointTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestPoint.cpp:62:10: warning: too many arguments for format [-Wformat-extra-args] 62 | fail("new(std::nothrow) Point() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestPoint.cpp: In function 'void test_Point_createWithCoordinates_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestPoint.cpp:91:10: warning: too many arguments for format [-Wformat-extra-args] 91 | fail("new(std::nothrow) Point(1.2,0.4,3.1415) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp:52: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp: In function 'void ReactionGlyphTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestReactionGlyph.cpp:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("new(std::nothrow) ReactionGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Linking CXX executable test_l3v2extendedmath_validator cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_l3v2extendedmath_validator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_l3v2extendedmath_validator.dir/TestFile.cpp.o CMakeFiles/test_l3v2extendedmath_validator.dir/TestL3v2MathConsistencyValidator.cpp.o CMakeFiles/test_l3v2extendedmath_validator.dir/TestValidator.cpp.o -o test_l3v2extendedmath_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Built target test_l3v2extendedmath_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp: In function 'void ReferenceGlyphTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestReferenceGlyph.cpp:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("new(std::nothrow) ReferenceGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o -MF CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o.d -o CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/test/TestCheckConsistency.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o -MF CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o.d -o CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/test/TestMultiAST.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestSBMLHandler.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp: In function 'void SpeciesGlyphTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesGlyph.cpp:66:10: warning: too many arguments for format [-Wformat-extra-args] 66 | fail("new(std::nothrow) SpeciesGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o -MF CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o.d -o CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/test/TestMultiExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/test/TestMultiExtension.cpp:13: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/test/TestMultiExtension.cpp: In function 'void MultiExtensionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/test/TestMultiExtension.cpp:52:10: warning: too many arguments for format [-Wformat-extra-args] 52 | fail("Failed to create a MultiExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp: In function 'void SpeciesReferenceGlyphTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestSpeciesReferenceGlyph.cpp:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("new(std::nothrow) SpeciesReferenceGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp: In function 'void TextGlyphTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestTextGlyph.cpp:57:10: warning: too many arguments for format [-Wformat-extra-args] 57 | fail("new(std::nothrow) TextGlyph() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Linking CXX executable test_extension_package_l3v2extendedmath cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_l3v2extendedmath.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestL3v2EMExtension.cpp.o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadL3v2EMExtension.cpp.o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestReadWriteInfix.cpp.o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestWriteL3v2EMExtension.cpp.o CMakeFiles/test_extension_package_l3v2extendedmath.dir/TestRunner.c.o -o test_extension_package_l3v2extendedmath ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Built target test_extension_package_l3v2extendedmath make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o -MF CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o.d -o CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/utility.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_multi_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_multi_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o -MF CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o.d -o CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/test/TestMultiConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 75%] Linking CXX executable test_layout_validator cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_layout_validator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_layout_validator.dir/TestFile.cpp.o CMakeFiles/test_layout_validator.dir/TestLayoutConsistencyValidator.cpp.o CMakeFiles/test_layout_validator.dir/TestValidator.cpp.o -o test_layout_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Built target test_layout_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestGetAllElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o -MF CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o.d -o CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestQualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestQualExtension.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestQualExtension.cpp: In function 'void QualExtensionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestQualExtension.cpp:84:10: warning: too many arguments for format [-Wformat-extra-args] 84 | fail("Failed to create a QualExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o -MF CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o.d -o CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestReadQualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o -MF CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o.d -o CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp: In function 'void WriteQualExtensionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestWriteQualExtension.cpp:82:22: warning: too many arguments for format [-Wformat-extra-args] 82 | fail("Failed to create a QualExtension object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -MF CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o.d -o CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Linking CXX executable test_sbml_package_multi cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_multi.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_package_multi.dir/TestCheckConsistency.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestMultiAST.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestMultiExtension.cpp.o CMakeFiles/test_sbml_package_multi.dir/TestRunner.c.o -o test_sbml_package_multi ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Built target test_sbml_package_multi make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestCopyAndClone.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp: In function 'void DefaultTermTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestDefaultTerm.cpp:77:10: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("Failed to create a DefaultTerm object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp: In function 'void FunctionTermTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestFunctionTerm.cpp:78:10: warning: too many arguments for format [-Wformat-extra-args] 78 | fail("Failed to create a FunctionTerm object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestInput.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestInput.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestInput.cpp: In function 'void InputTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestInput.cpp:76:10: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("Failed to create a Input object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Linking CXX executable test_multi_validator cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_multi_validator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_multi_validator.dir/TestFile.cpp.o CMakeFiles/test_multi_validator.dir/TestMultiConsistencyValidator.cpp.o CMakeFiles/test_multi_validator.dir/TestValidator.cpp.o -o test_multi_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Built target test_multi_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_qual_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_qual_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp: In function 'void ListOfFunctionTermsTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestListOfFunctionTerms.cpp:77:10: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("Failed to create a ListOfFunctionTerms object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o -MF CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o.d -o CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/test/TestQualConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestOutput.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestOutput.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestOutput.cpp: In function 'void OutputTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestOutput.cpp:76:10: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("Failed to create a Output object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Linking CXX executable test_sbml_package_layout cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_layout.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_package_layout.dir/TestBoundingBox.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCompartmentGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCubicBezier.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestCurve.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestDimensions.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestGeneralGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestGraphicalObject.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayout.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutCreation.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutFormatter.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLayoutWriting.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestLineSegment.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestPoint.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestReactionGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestReferenceGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSBMLHandler.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestSpeciesReferenceGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestTextGlyph.cpp.o CMakeFiles/test_sbml_package_layout.dir/utility.cpp.o CMakeFiles/test_sbml_package_layout.dir/TestRunner.c.o -o test_sbml_package_layout ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Built target test_sbml_package_layout make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp: In function 'void QualitativeSpeciesTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestQualitativeSpecies.cpp:76:10: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("Failed to create a QualitativeSpecies object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp: In function 'void ColorDefinitionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestColorDefinition.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)ColorDefinition(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o -MF CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestTransition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestTransition.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestTransition.cpp: In function 'void TransitionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestTransition.cpp:76:10: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("Failed to create a Transition object"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestEllipse.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestEllipse.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestEllipse.cpp: In function 'void EllipseTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestEllipse.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Ellipse(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp:56: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp: In function 'void GlobalRenderInformationTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGlobalRenderInformation.cpp:76:14: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("new(std::nothrow)GlobalRenderInformation(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp:57: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp: In function 'void GlobalStyleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGlobalStyle.cpp:77:14: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("new(std::nothrow)GlobalStyle(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGradientBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGradientBase.cpp:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGradientBase.cpp: In function 'void GradientBaseTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGradientBase.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)LinearGradient(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGradientStop.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGradientStop.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGradientStop.cpp: In function 'void GradientStop_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGradientStop.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)GradientStop(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp: In function 'void GraphicalPrimitive1DTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive1D.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)Text(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Linking CXX executable test_extension_package_qual cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_extension_package_qual.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_extension_package_qual.dir/TestGetAllElements.cpp.o CMakeFiles/test_extension_package_qual.dir/TestQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestReadQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestWriteQualExtension.cpp.o CMakeFiles/test_extension_package_qual.dir/TestRunner.c.o -o test_extension_package_qual ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 79%] Built target test_extension_package_qual make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 79%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_render_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_render_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp: In function 'void GraphicalPrimitive2DTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGraphicalPrimitive2D.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)Rectangle(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 79%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o -MF CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o.d -o CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/test/TestRenderConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 80%] Building CXX object src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -MF CMakeFiles/test_render_validator.dir/TestValidator.cpp.o.d -o CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 79%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGroup.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGroup.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGroup.cpp: In function 'void GroupTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestGroup.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Group(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestImage.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestImage.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestImage.cpp: In function 'void ImageTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestImage.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Image(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLineEnding.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLineEnding.cpp:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLineEnding.cpp: In function 'void LineEndingTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLineEnding.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)LineEnding(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp: In function 'void LinearGradientTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLinearGradient.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)LinearGradient(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp:56: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp: In function 'void LocalRenderInformationTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLocalRenderInformation.cpp:76:14: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("new(std::nothrow)LocalRenderInformation(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp:57: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp: In function 'void LocalStyleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestLocalStyle.cpp:77:14: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("new(std::nothrow)LocalStyle(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestPolygon.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestPolygon.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestPolygon.cpp: In function 'void PolygonTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestPolygon.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Polygon(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp: In function 'void RadialGradientTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRadialGradient.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)RadialGradient(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 80%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRectangle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRectangle.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRectangle.cpp: In function 'void RectangleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRectangle.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Rectangle(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp: In function 'void RelAbsVectorTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRelAbsVector.cpp:72:14: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("new(std::nothrow)RelAbsVector() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp: In function 'void RenderCubicBezierTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderCubicBezier.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)RenderCubicBezier(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Linking CXX executable test_qual_validator cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_qual_validator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_qual_validator.dir/TestFile.cpp.o CMakeFiles/test_qual_validator.dir/TestQualConsistencyValidator.cpp.o CMakeFiles/test_qual_validator.dir/TestValidator.cpp.o -o test_qual_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Built target test_qual_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestCopyAndClone.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp:52: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp: In function 'void RenderCurveTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderCurve.cpp:72:14: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("new(std::nothrow)RenderCurve(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestL3ModelHistory.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Linking CXX executable test_sbml_package_qual cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_qual.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_package_qual.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestDefaultTerm.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestFunctionTerm.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestInput.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestListOfFunctionTerms.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestOutput.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestQualitativeSpecies.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestTransition.cpp.o CMakeFiles/test_sbml_package_qual.dir/TestRunner.c.o -o test_sbml_package_qual ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Built target test_sbml_package_qual make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test/TestConversionOption.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp: In function 'void RenderInformationBaseTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderInformationBase.cpp:75:14: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("new(std::nothrow)GlobalRenderInformation(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test/TestConversionProperties.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotation2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotation2.cpp:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotation2.cpp: In function 'void test_RDFAnnotation2_modelWithHistoryAndCVTerms_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotation2.cpp:223:10: warning: too many arguments for format [-Wformat-extra-args] 223 | fail("parseModelHistory failed"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp: In function 'void RenderPointTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderPoint.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)RenderPoint(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test/TestInferUnitsConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotationMetaid.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test/TestLevelVersionConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotationNestedCVTerms.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test/TestRateOfConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp: In function 'void test_RDFAnnotationV4_modelWithHistoryAndCVTerms_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp:232:10: warning: too many arguments for format [-Wformat-extra-args] 232 | fail("parseModelHistory failed"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp: In function 'void test_RDFAnnotationV4_modelWithHistoryAndCVTerms_31_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotationVCard4.cpp:478:10: warning: too many arguments for format [-Wformat-extra-args] 478 | fail("parseModelHistory failed"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 82%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test/TestSBMLConverterRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 82%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test/TestStripPackageConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestCVTerms_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 80%] Linking CXX executable test_render_validator cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_render_validator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_render_validator.dir/TestFile.cpp.o CMakeFiles/test_render_validator.dir/TestRenderConsistencyValidator.cpp.o CMakeFiles/test_render_validator.dir/TestValidator.cpp.o -o test_render_validator ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Built target test_render_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestDate_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestModelCreator_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test/TestPackage.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building C object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test && /usr/bin/gcc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 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src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_extension.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_extension.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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[ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test/TestUnitsConverter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o -MF CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRDFAnnotationC.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building CXX object src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER 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CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test/TestSBMLExtension.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test/TestSBMLExtensionNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test/TestUnitsConverter2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test/TestSBMLExtensionRegistry.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test/TestSBaseExtensionPoint.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o -MF CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o.d -o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test/TestUnitsConverterL2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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'/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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-MF CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test/TestSBasePluginCreator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test/TestSBasePluginCreatorBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -MF CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o.d -o CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test/TestUnknownPackage.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRenderWriting.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestStyle.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestStyle.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestStyle.cpp: In function 'void StyleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestStyle.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)LocalStyle(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestText.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestText.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestText.cpp: In function 'void TextTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestText.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Text(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestTransformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestTransformation.cpp:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestTransformation.cpp: In function 'void TransformationTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestTransformation.cpp:69:14: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("new(std::nothrow)Text(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o -MF CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o.d -o CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp: In function 'void Transformation2DTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestTransformation2D.cpp:74:14: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("new(std::nothrow)Text(renderns) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 85%] Building CXX object src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Linking CXX executable test_sbml_annotation cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_annotation.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_annotation.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_annotation.dir/TestL3ModelHistory.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotation2.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationMetaid.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationNestedCVTerms.cpp.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationVCard4.cpp.o CMakeFiles/test_sbml_annotation.dir/TestSyncAnnotation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestValidation.cpp.o CMakeFiles/test_sbml_annotation.dir/TestCVTerms.c.o CMakeFiles/test_sbml_annotation.dir/TestCVTerms_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestDate_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestModelCreator_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestModelHistory.c.o CMakeFiles/test_sbml_annotation.dir/TestModelHistory_newSetters.c.o CMakeFiles/test_sbml_annotation.dir/TestRDFAnnotationC.c.o CMakeFiles/test_sbml_annotation.dir/TestRunner.c.o -o test_sbml_annotation ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 85%] Built target test_sbml_annotation make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test/CMakeFiles/test_sbml_math.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestChildFunctions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestGetValue.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestL3FormulaParser.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 85%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFile1.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFile1.cpp:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFile1.cpp: In function 'void test_read_MathML_1_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFile1.cpp:103:10: warning: too many arguments for format [-Wformat-extra-args] 103 | fail("readSBML(\"mathML_1-invalid.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Linking CXX executable test_sbml_conversion cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_conversion.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_conversion.dir/TestConversionOption.cpp.o CMakeFiles/test_sbml_conversion.dir/TestConversionProperties.cpp.o CMakeFiles/test_sbml_conversion.dir/TestInferUnitsConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestLevelVersionConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestRateOfConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLConverterRegistry.cpp.o CMakeFiles/test_sbml_conversion.dir/TestSBMLRuleConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestStripPackageConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverter2.cpp.o CMakeFiles/test_sbml_conversion.dir/TestUnitsConverterL2.cpp.o CMakeFiles/test_sbml_conversion.dir/TestRunner.c.o -o test_sbml_conversion ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Built target test_sbml_conversion make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test/CMakeFiles/test_sbml_sbml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFile2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFile2.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFile2.cpp: In function 'void test_read_MathML_2_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFile2.cpp:83:10: warning: too many arguments for format [-Wformat-extra-args] 83 | fail("readSBML(\"mathML_2-invalid.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Linking CXX executable test_sbml_extension cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_extension.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_extension.dir/TestPackage.cpp.o CMakeFiles/test_sbml_extension.dir/TestRunner.c.o CMakeFiles/test_sbml_extension.dir/TestSBMLDocumentPlugin.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtension.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionNamespaces.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBMLExtensionRegistry.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBaseExtensionPoint.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePlugin.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreator.cpp.o CMakeFiles/test_sbml_extension.dir/TestSBasePluginCreatorBase.cpp.o CMakeFiles/test_sbml_extension.dir/TestUnknownPackage.cpp.o -o test_sbml_extension ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Built target test_sbml_extension make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test/CMakeFiles/test_sbml_units.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFileL3V2.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadFromFileL3V2.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestReadFromFileL3V2.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestReadFromFileL3V2.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFileL3V2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFileL3V2.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFileL3V2.cpp: In function 'void test_read_MathML_L3V2_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadFromFileL3V2.cpp:96:10: warning: too many arguments for format [-Wformat-extra-args] 96 | fail("readSBML(\"L3V2Math.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAncestor.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestCalculatedUnitDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadMathML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadMathML.cpp:44: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadMathML.cpp:1539:13: warning: 'test_element_implies' defined but not used [-Wunused-variable] 1539 | START_TEST (test_element_implies) | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadMathML.cpp:1520:13: warning: 'test_element_rem' defined but not used [-Wunused-variable] 1520 | START_TEST (test_element_rem) | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadMathML.cpp:1501:13: warning: 'test_element_quotient' defined but not used [-Wunused-variable] 1501 | START_TEST (test_element_quotient) | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadMathML.cpp:1482:13: warning: 'test_element_min' defined but not used [-Wunused-variable] 1482 | START_TEST (test_element_min) | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestReadMathML.cpp:1463:13: warning: 'test_element_max' defined but not used [-Wunused-variable] 1463 | START_TEST (test_element_max) | ^~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestDerivedUnitDefinitions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestValidASTNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestValidASTNode.cpp: In function 'void test_ValidASTNode_Number_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestValidASTNode.cpp:174:7: warning: unused variable 'i' [-Wunused-variable] 174 | int i = n->addChild(d); | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestValidASTNode.cpp: In function 'void test_ValidASTNode_Name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestValidASTNode.cpp:190:7: warning: unused variable 'i' [-Wunused-variable] 190 | int i = n->addChild(d); | ^ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAttributeFunctions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAttributeFunctions.cpp:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAttributeFunctions.cpp: In function 'void AttributeTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAttributeFunctions.cpp:77:10: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAttributeFunctions.cpp: At global scope: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAttributeFunctions.cpp:1353:13: warning: 'test_Attributes_Trigger_Id' defined but not used [-Wunused-variable] 1353 | START_TEST (test_Attributes_Trigger_Id) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestDerivedUnitDefinitions_undefined.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestWriteMathML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 86%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConsistencyChecks.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConsistencyChecks.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConsistencyChecks.cpp: In function 'void test_consistency_checks_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConsistencyChecks.cpp:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("readSBML(\"inconsistent.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConsistencyChecks.cpp: In function 'void test_strict_unit_consistency_checks_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConsistencyChecks.cpp:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("readSBML(\"l3v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestFormulaUnitsData.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o -MF CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o.d -o CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestWriteMathMLFromAST.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCopyAndClone.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestFormulaUnitsData_map.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp: In function 'void test_GetMultipleObjects_getId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp: In function 'void test_GetMultipleObjects_getMetaId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp:169:10: warning: too many arguments for format [-Wformat-extra-args] 169 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp: In function 'void test_GetMultipleObjects_noLocalParameters_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp:350:10: warning: too many arguments for format [-Wformat-extra-args] 350 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp: In function 'void test_GetMultipleObjects_noUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp:380:10: warning: too many arguments for format [-Wformat-extra-args] 380 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp: In function 'void test_GetMultipleObjects_noAssignments_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp:408:10: warning: too many arguments for format [-Wformat-extra-args] 408 | fail("readSBML(\"assignments-invalid.xml\") returned an empty model."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp: In function 'void test_GetMultipleObjects_allElements_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp:454:10: warning: too many arguments for format [-Wformat-extra-args] 454 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp: In function 'void test_GetMultipleObjects_withFilter_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestGetMultipleObjects.cpp:490:10: warning: too many arguments for format [-Wformat-extra-args] 490 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestUnitFormulaFormatter.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestASTNode.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestASTNode.c.o -MF CMakeFiles/test_sbml_math.dir/TestASTNode.c.o.d -o CMakeFiles/test_sbml_math.dir/TestASTNode.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestASTNode.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestASTNode.c:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestASTNode.c: In function 'void test_ASTNode_setName_1_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestASTNode.c:1513:10: warning: too many arguments for format [-Wformat-extra-args] 1513 | fail("ASTNode_setName(...) did not make a copy of name."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestASTNode.c:1521:10: warning: too many arguments for format [-Wformat-extra-args] 1521 | fail("ASTNode_setName(node, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o -MF CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o.d -o CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestFormulaFormatter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestUnitFormulaFormatter1.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml 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Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp: In function 'void test_LevelCompatibility_unit_fails_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("readSBML(\"inconsistent-l2v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp: In function 'void test_LevelCompatibility_unit_warnings_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp:107:10: warning: too many arguments for format [-Wformat-extra-args] 107 | fail("readSBML(\"inconsistent-l2v1-units-2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp: In function 'void test_LevelCompatibility_unit_fails_l1_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("readSBML(\"inconsistent-l2v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp: In function 'void test_LevelCompatibility_unit_warnings_l1_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp:172:10: warning: too many arguments for format [-Wformat-extra-args] 172 | fail("readSBML(\"inconsistent-l2v1-units-2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp: In function 'void test_LevelCompatibility_unit_fails_l2v2_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp:203:10: warning: too many arguments for format [-Wformat-extra-args] 203 | fail("readSBML(\"inconsistent-l2v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp: In function 'void test_LevelCompatibility_unit_fails_l2v3_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestLevelCompatibility.cpp:237:10: warning: too many arguments for format [-Wformat-extra-args] 237 | fail("readSBML(\"inconsistent-l2v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestUnitFormulaFormatter3.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o -MF CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o.d -o CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestL3FormulaFormatter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile5.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile5.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile5.cpp: In function 'void test_read_l2v1_assignment_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile5.cpp:91:10: warning: too many arguments for format [-Wformat-extra-args] 91 | fail("readSBML(\"l2v1-assignment.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o -MF CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o.d -o CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestUtilsUnit.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile6.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile6.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile6.cpp: In function 'void test_read_l2v2_newComponents_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile6.cpp:96:10: warning: too many arguments for format [-Wformat-extra-args] 96 | fail("readSBML(\"l2v2-newComponents.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o -MF CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o.d -o CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestL3FormulaParserC.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 88%] Building CXX object src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator 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src/sbml/math/test/CMakeFiles/test_sbml_math.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_math.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_math.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml 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/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestUtilsUnitDefinition.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 88%] Building CXX object src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/units/test/CMakeFiles/test_sbml_units.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_units.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_units.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile7.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile7.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile7.cpp: In function 'void test_read_l2v3_all_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile7.cpp:111:10: warning: too many arguments for format [-Wformat-extra-args] 111 | fail("readSBML(\"l2v3-all.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 88%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile8.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile8.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile8.cpp: In function 'void test_read_l2v4_new_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile8.cpp:80:10: warning: too many arguments for format [-Wformat-extra-args] 80 | fail("readSBML(\"l2v4-new.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile9.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile9.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile9.cpp: In function 'void test_read_l3v1_new_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile9.cpp:87:10: warning: too many arguments for format [-Wformat-extra-args] 87 | fail("readSBML(\"l3v1-new-invalid.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL2V5.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL2V5.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL2V5.cpp: In function 'void test_read_l2v5_all_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL2V5.cpp:111:10: warning: too many arguments for format [-Wformat-extra-args] 111 | fail("readSBML(\"l2v5-all.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL2V5.cpp: In function 'void test_echo_l2v5_all_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL2V5.cpp:590:10: warning: too many arguments for format [-Wformat-extra-args] 590 | fail("readSBML(\"l2v5-all.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2.cpp: In function 'void test_read_l3v2_all_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2.cpp:102:10: warning: too many arguments for format [-Wformat-extra-args] 102 | fail("readSBML(\"l3v2-all.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2.cpp: In function 'void test_echo_l3v2_all_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2.cpp:585:10: warning: too many arguments for format [-Wformat-extra-args] 585 | fail("readSBML(\"l3v2-all.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_1.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_1.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_1.cpp: In function 'void test_read_l3v2_no_model_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_1.cpp:87:10: warning: too many arguments for format [-Wformat-extra-args] 87 | fail("readSBML(\"l3v2-no-model.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_1.cpp: In function 'void test_echo_l3v2_no_model_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_1.cpp:124:10: warning: too many arguments for format [-Wformat-extra-args] 124 | fail("readSBML(\"l3v2-no-model.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp: In function 'void test_read_l3v2_empty_lo_1_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp:85:10: warning: too many arguments for format [-Wformat-extra-args] 85 | fail("readSBML(\"l3v2-empty-lo-1.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp: In function 'void test_echo_l3v2_empty_lo_1_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp:209:10: warning: too many arguments for format [-Wformat-extra-args] 209 | fail("readSBML(\"l3v2-empty-lo-1.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp: In function 'void test_echo_l3v2_empty_lo_3_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_2.cpp:330:10: warning: too many arguments for format [-Wformat-extra-args] 330 | fail("readSBML(\"l3v2-empty-lo-3.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_3.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_3.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_3.cpp: In function 'void test_read_l3v2_empty_lo_2_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_3.cpp:86:10: warning: too many arguments for format [-Wformat-extra-args] 86 | fail("readSBML(\"l3v2-empty-lo-2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_3.cpp: In function 'void test_echo_l3v2_empty_lo_2_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_3.cpp:245:10: warning: too many arguments for format [-Wformat-extra-args] 245 | fail("readSBML(\"l3v2-empty-lo-2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_4.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_4.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_4.cpp: In function 'void test_read_l3v2_empty_math_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_4.cpp:86:10: warning: too many arguments for format [-Wformat-extra-args] 86 | fail("readSBML(\"l3v2-empty-lo-3.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_4.cpp: In function 'void test_echo_l3v2_empty_math_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_4.cpp:180:10: warning: too many arguments for format [-Wformat-extra-args] 180 | fail("readSBML(\"l3v2-empty-math.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_5.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_5.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_5.cpp: In function 'void test_read_l3v2_empty_event_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_5.cpp:86:10: warning: too many arguments for format [-Wformat-extra-args] 86 | fail("readSBML(\"l3v2-empty-event.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_5.cpp: In function 'void test_echo_l3v2_empty_event_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_5.cpp:173:10: warning: too many arguments for format [-Wformat-extra-args] 173 | fail("readSBML(\"l3v2-empty-event.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_6.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_6.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_6.cpp: In function 'void test_read_l3v2_empty_event2_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_6.cpp:86:10: warning: too many arguments for format [-Wformat-extra-args] 86 | fail("readSBML(\"l3v2-empty-event2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_6.cpp: In function 'void test_echo_l3v2_empty_event2_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFileL3V2_6.cpp:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("readSBML(\"l3v2-empty-event2.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadSBML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRemoveFromParent.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRemoveFromParent.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRemoveFromParent.cpp: In function 'void test_RemoveFromParent_successfulRemoves_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRemoveFromParent.cpp:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRemoveFromParent.cpp: In function 'void test_RemoveFromParent_alreadyRemoved_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRemoveFromParent.cpp:338:10: warning: too many arguments for format [-Wformat-extra-args] 338 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 89%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRenameIDs.cpp In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRenameIDs.cpp:48: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRenameIDs.cpp: In function 'void test_RenameIDs_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRenameIDs.cpp:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("readSBML(\"multiple-ids.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRequiredAttributes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRequiredElements.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLConstructorException.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLConvertFromL3V2.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLConvertStrict.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLNamespaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 85%] Linking CXX executable test_sbml_package_render cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_package_render.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_package_render.dir/TestColorDefinition.cpp.o CMakeFiles/test_sbml_package_render.dir/TestEllipse.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGlobalRenderInformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGlobalStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGradientBase.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGradientStop.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive1D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGraphicalPrimitive2D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestGroup.cpp.o CMakeFiles/test_sbml_package_render.dir/TestImage.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLineEnding.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLinearGradient.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLocalRenderInformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestLocalStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestPolygon.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRadialGradient.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRectangle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRelAbsVector.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderCubicBezier.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderCurve.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderExtension.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderInformationBase.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderPoint.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderReading.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRenderWriting.cpp.o CMakeFiles/test_sbml_package_render.dir/TestStyle.cpp.o CMakeFiles/test_sbml_package_render.dir/TestText.cpp.o CMakeFiles/test_sbml_package_render.dir/TestTransformation.cpp.o CMakeFiles/test_sbml_package_render.dir/TestTransformation2D.cpp.o CMakeFiles/test_sbml_package_render.dir/TestRunner.c.o -o test_sbml_package_render ../../../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Built target test_sbml_package_render make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test/CMakeFiles/test_sbml_util.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestList.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test && /usr/bin/gcc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestList.c.o -MF CMakeFiles/test_sbml_util.dir/TestList.c.o.d -o CMakeFiles/test_sbml_util.dir/TestList.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestList.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestList.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestList.c: In function 'ListTest_setup': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestList.c:58:10: warning: too many arguments for format [-Wformat-extra-args] 58 | fail("List_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestMemory.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test && /usr/bin/gcc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestMemory.c.o -MF CMakeFiles/test_sbml_util.dir/TestMemory.c.o.d -o CMakeFiles/test_sbml_util.dir/TestMemory.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestMemory.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestMemory.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestMemory.c: In function 'test_memory_safe_malloc_fn': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestMemory.c:64:10: warning: too many arguments for format [-Wformat-extra-args] 64 | fail("safe_malloc() should not return NULL"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test && /usr/bin/gcc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_util.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_util.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStack.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test && /usr/bin/gcc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStack.c.o -MF CMakeFiles/test_sbml_util.dir/TestStack.c.o.d -o CMakeFiles/test_sbml_util.dir/TestStack.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestStack.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestStack.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestStack.c: In function 'StackTest_setup': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestStack.c:58:10: warning: too many arguments for format [-Wformat-extra-args] 58 | fail("Stack_create(10) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test && /usr/bin/gcc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o -MF CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o.d -o CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestStringBuffer.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestStringBuffer.c:42: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestStringBuffer.c: In function 'StringBufferTest_setup': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestStringBuffer.c:59:10: warning: too many arguments for format [-Wformat-extra-args] 59 | fail("StringBuffer_create(10) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestStringBuffer.c: In function 'test_StringBuffer_toString_fn': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestStringBuffer.c:357:10: warning: too many arguments for format [-Wformat-extra-args] 357 | fail("StringBuffer_toString() did not make a copy of its internal buffer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Building C object src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestUtil.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test && /usr/bin/gcc -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/util/test/CMakeFiles/test_sbml_util.dir/TestUtil.c.o -MF CMakeFiles/test_sbml_util.dir/TestUtil.c.o.d -o CMakeFiles/test_sbml_util.dir/TestUtil.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestUtil.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestUtil.c:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestUtil.c: In function 'test_util_NaN_fn': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestUtil.c:269:24: warning: too many arguments for format [-Wformat-extra-args] 269 | fail_unless( d != d, "util_NaN() did not return NaN."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestUtil.c: In function 'test_util_NegInf_fn': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestUtil.c:281:10: warning: too many arguments for format [-Wformat-extra-args] 281 | fail("util_NegInf() did not return -Inf."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestUtil.c: In function 'test_util_PosInf_fn': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestUtil.c:294:10: warning: too many arguments for format [-Wformat-extra-args] 294 | fail("util_PosInf() did not return +Inf."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestUtil.c: In function 'test_util_NegZero_fn': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test/TestUtil.c:305:23: warning: too many arguments for format [-Wformat-extra-args] 305 | fail_unless(d == 0, "util_NegZero() did not even return a zero!"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 90%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLParentObject.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Linking CXX executable test_sbml_util cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_util.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_util.dir/TestList.c.o CMakeFiles/test_sbml_util.dir/TestMemory.c.o CMakeFiles/test_sbml_util.dir/TestRunner.c.o CMakeFiles/test_sbml_util.dir/TestStack.c.o CMakeFiles/test_sbml_util.dir/TestStringBuffer.c.o CMakeFiles/test_sbml_util.dir/TestUtil.c.o -o test_sbml_util ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Built target test_sbml_util make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o -MF CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o.d -o CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/test/TestConsistencyValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp: In function 'void test_SBMLTransforms_replaceFD_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp:79:10: warning: too many arguments for format [-Wformat-extra-args] 79 | fail("readSBML(\"multiple-functions.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp: In function 'void test_SBMLTransforms_replaceIA_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp:591:10: warning: too many arguments for format [-Wformat-extra-args] 591 | fail("readSBML(\"initialAssignments.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp: In function 'void test_SBMLTransforms_replaceIA_species_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp:745:10: warning: too many arguments for format [-Wformat-extra-args] 745 | fail("readSBML(\"initialAssignments_species.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp: In function 'void test_SBMLTransforms_evaluateL3V2ASTWithModel_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp:815:10: warning: too many arguments for format [-Wformat-extra-args] 815 | fail("readSBML(\"multiple-functions.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp: In function 'void test_SBMLTransforms_replaceIAWithFD_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp:852:10: warning: too many arguments for format [-Wformat-extra-args] 852 | fail("readSBML(\"initialAssignments.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp: At global scope: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLTransforms.cpp:838:12: warning: 'test_SBMLTransforms_replaceIAWithFD' defined but not used [-Wunused-variable] 838 | START_TEST(test_SBMLTransforms_replaceIAWithFD) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator 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-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o -MF CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o.d -o CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/test/TestFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common 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src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLValidators.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Building CXX object src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/validator/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator 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CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/test/TestValidator.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:54: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp: In function 'void SBaseTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:80:10: warning: too many arguments for format [-Wformat-extra-args] 80 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp: In function 'void test_SBase_setMetaId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:105:10: warning: too many arguments for format [-Wformat-extra-args] 105 | fail("SBase_setMetaId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:117:10: warning: too many arguments for format [-Wformat-extra-args] 117 | fail("SBase_setMetaId(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp: In function 'void test_SBase_setNotes_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:136:10: warning: too many arguments for format [-Wformat-extra-args] 136 | fail("SBase_setNotes(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:156:10: warning: too many arguments for format [-Wformat-extra-args] 156 | fail("SBase_setNotes(c, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp: In function 'void test_SBase_setAnnotation_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:222:10: warning: too many arguments for format [-Wformat-extra-args] 222 | fail("SBase_setAnnotation(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:234:10: warning: too many arguments for format [-Wformat-extra-args] 234 | fail("SBase_setAnnotation(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp: In function 'void test_SBase_setNotesString_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:442:10: warning: too many arguments for format [-Wformat-extra-args] 442 | fail("SBase_setNotesString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:467:10: warning: too many arguments for format [-Wformat-extra-args] 467 | fail("SBase_getNotesString(c, "") did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:477:10: warning: too many arguments for format [-Wformat-extra-args] 477 | fail("SBase_setNotesString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp: In function 'void test_SBase_setNotesString_l3_addMarkup_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:518:10: warning: too many arguments for format [-Wformat-extra-args] 518 | fail("SBase_setNotesString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:538:10: warning: too many arguments for format [-Wformat-extra-args] 538 | fail("SBase_setNotesString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp: In function 'void test_SBase_setAnnotationString_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:567:10: warning: too many arguments for format [-Wformat-extra-args] 567 | fail("SBase_setAnnotationString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:591:10: warning: too many arguments for format [-Wformat-extra-args] 591 | fail("SBase_getAnnotationString(S, "") did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase.cpp:601:10: warning: too many arguments for format [-Wformat-extra-args] 601 | fail("SBase_setAnnotationString(...) did not make a copy of node."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:55: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp: In function 'void SBaseIdNameTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:90:10: warning: too many arguments for format [-Wformat-extra-args] 90 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:97:10: warning: too many arguments for format [-Wformat-extra-args] 97 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:104:10: warning: too many arguments for format [-Wformat-extra-args] 104 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:111:10: warning: too many arguments for format [-Wformat-extra-args] 111 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:118:10: warning: too many arguments for format [-Wformat-extra-args] 118 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:125:10: warning: too many arguments for format [-Wformat-extra-args] 125 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:132:10: warning: too many arguments for format [-Wformat-extra-args] 132 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:139:10: warning: too many arguments for format [-Wformat-extra-args] 139 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:146:10: warning: too many arguments for format [-Wformat-extra-args] 146 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:153:10: warning: too many arguments for format [-Wformat-extra-args] 153 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp: In function 'void test_SBase_setName_1_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:232:10: warning: too many arguments for format [-Wformat-extra-args] 232 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:244:10: warning: too many arguments for format [-Wformat-extra-args] 244 | fail("SBase_setName(S31, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp: In function 'void test_SBase_setName_2_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:308:10: warning: too many arguments for format [-Wformat-extra-args] 308 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:320:10: warning: too many arguments for format [-Wformat-extra-args] 320 | fail("SBase_setName(S32, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp: In function 'void test_SBase_setName_3_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:384:10: warning: too many arguments for format [-Wformat-extra-args] 384 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:396:10: warning: too many arguments for format [-Wformat-extra-args] 396 | fail("SBase_setName(E31, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp: In function 'void test_SBase_setName_4_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:460:10: warning: too many arguments for format [-Wformat-extra-args] 460 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:472:10: warning: too many arguments for format [-Wformat-extra-args] 472 | fail("SBase_setName(E32, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp: In function 'void test_SBase_setName_6_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:595:10: warning: too many arguments for format [-Wformat-extra-args] 595 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:607:10: warning: too many arguments for format [-Wformat-extra-args] 607 | fail("SBase_setName(U32, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp: In function 'void test_SBase_setName_8_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:773:10: warning: too many arguments for format [-Wformat-extra-args] 773 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:785:10: warning: too many arguments for format [-Wformat-extra-args] 785 | fail("SBase_setName(AR32, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp: In function 'void test_SBase_setName_10_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:978:10: warning: too many arguments for format [-Wformat-extra-args] 978 | fail("SBase_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBaseIdName.cpp:990:10: warning: too many arguments for format [-Wformat-extra-args] 990 | fail("SBase_setName(EA32, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase_newSetters.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase_newSetters.cpp:52: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase_newSetters.cpp: In function 'void SBaseTest_setup1()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBase_newSetters.cpp:79:10: warning: too many arguments for format [-Wformat-extra-args] 79 | fail("'new(std::nothrow) SBase;' returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestWriteL3SBML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestWriteL3V2SBML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 88%] Linking CXX executable test_sbml_units cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_units.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_units.dir/TestCalculatedUnitDefinitions.cpp.o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions.cpp.o CMakeFiles/test_sbml_units.dir/TestDerivedUnitDefinitions_undefined.cpp.o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData.cpp.o CMakeFiles/test_sbml_units.dir/TestFormulaUnitsData_map.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter1.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter2.cpp.o CMakeFiles/test_sbml_units.dir/TestUnitFormulaFormatter3.cpp.o CMakeFiles/test_sbml_units.dir/TestUtilsUnit.cpp.o CMakeFiles/test_sbml_units.dir/TestUtilsUnitDefinition.cpp.o CMakeFiles/test_sbml_units.dir/TestRunner.c.o -o test_sbml_units ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Built target test_sbml_units make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o -MF CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o.d -o CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestWriteSBML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAlgebraicRule.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAlgebraicRule.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAlgebraicRule.c: In function 'void AlgebraicRuleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAlgebraicRule.c:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("AlgebraicRule_createAlgebraic() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 88%] Linking CXX executable test_sbml_math cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_math.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_math.dir/TestChildFunctions.cpp.o CMakeFiles/test_sbml_math.dir/TestGetValue.cpp.o CMakeFiles/test_sbml_math.dir/TestL3FormulaParser.cpp.o CMakeFiles/test_sbml_math.dir/TestReadFromFile1.cpp.o CMakeFiles/test_sbml_math.dir/TestReadFromFile2.cpp.o CMakeFiles/test_sbml_math.dir/TestReadFromFileL3V2.cpp.o CMakeFiles/test_sbml_math.dir/TestReadMathML.cpp.o CMakeFiles/test_sbml_math.dir/TestValidASTNode.cpp.o CMakeFiles/test_sbml_math.dir/TestWriteMathML.cpp.o CMakeFiles/test_sbml_math.dir/TestWriteMathMLFromAST.cpp.o CMakeFiles/test_sbml_math.dir/TestASTNode.c.o CMakeFiles/test_sbml_math.dir/TestFormulaFormatter.c.o CMakeFiles/test_sbml_math.dir/TestFormulaParser.c.o CMakeFiles/test_sbml_math.dir/TestFormulaTokenizer.c.o CMakeFiles/test_sbml_math.dir/TestL3FormulaFormatter.c.o CMakeFiles/test_sbml_math.dir/TestL3FormulaParserC.c.o CMakeFiles/test_sbml_math.dir/TestRunner.c.o -o test_sbml_math ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Built target test_sbml_math make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o -MF CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o.d -o CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestCopyAndClone.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAssignmentRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAssignmentRule.c:52: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAssignmentRule.c: In function 'void AssignmentRuleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAssignmentRule.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("AssignmentRule_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAssignmentRule.c: In function 'void test_AssignmentRule_setVariable_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAssignmentRule.c:118:10: warning: too many arguments for format [-Wformat-extra-args] 118 | fail("AssignmentRule_setVariable(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAssignmentRule.c:130:10: warning: too many arguments for format [-Wformat-extra-args] 130 | fail("AssignmentRule_setVariable(AR, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAssignmentRule.c: In function 'void test_AssignmentRule_unsetVariable_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestAssignmentRule.c:151:10: warning: too many arguments for format [-Wformat-extra-args] 151 | fail("AssignmentRule_unsetVariable(AR) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLAttributes.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c: In function 'void CompartmentTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Compartment_create(2, 4) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c: In function 'void test_Compartment_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c:184:10: warning: too many arguments for format [-Wformat-extra-args] 184 | fail("Compartment_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c:196:10: warning: too many arguments for format [-Wformat-extra-args] 196 | fail("Compartment_setId(C, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c: In function 'void test_Compartment_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c:214:10: warning: too many arguments for format [-Wformat-extra-args] 214 | fail("Compartment_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c:226:10: warning: too many arguments for format [-Wformat-extra-args] 226 | fail("Compartment_setName(C, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c: In function 'void test_Compartment_setUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c:244:10: warning: too many arguments for format [-Wformat-extra-args] 244 | fail("Compartment_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c:256:10: warning: too many arguments for format [-Wformat-extra-args] 256 | fail("Compartment_setUnits(C, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c: In function 'void test_Compartment_setOutside_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c:274:10: warning: too many arguments for format [-Wformat-extra-args] 274 | fail("Compartment_setOutside(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment.c:286:10: warning: too many arguments for format [-Wformat-extra-args] 286 | fail("Compartment_setOutside(C, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLError.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLExceptions.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType.c: In function 'void CompartmentTypeTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("CompartmentType_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType.c: In function 'void test_CompartmentType_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType.c:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("CompartmentType_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType.c:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("CompartmentType_setId(CT, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType.c: In function 'void test_CompartmentType_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType.c:168:10: warning: too many arguments for format [-Wformat-extra-args] 168 | fail("CompartmentType_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType.c:180:10: warning: too many arguments for format [-Wformat-extra-args] 180 | fail("CompartmentType_setName(CT, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType_newSetters.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType_newSetters.c: In function 'void CompartmentTypeTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentType_newSetters.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("CompartmentType_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_xml.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentVolumeRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentVolumeRule.c:47: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentVolumeRule.c: In function 'void CompartmentVolumeRuleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentVolumeRule.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Rule_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentVolumeRule.c: In function 'void test_CompartmentVolumeRule_setCompartment_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentVolumeRule.c:149:11: warning: too many arguments for format [-Wformat-extra-args] 149 | fail( "Rule_setVariable(...)" | ^~~~~~~~~~~~~~~~~~~~~~~ 150 | " did not make a copy of string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartmentVolumeRule.c:164:11: warning: too many arguments for format [-Wformat-extra-args] 164 | fail( "Rule_setVariable(CVR, NULL)" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | " did not clear string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLAttributesC.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLErrorC.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment_newSetters.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment_newSetters.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment_newSetters.c: In function 'void CompartmentTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestCompartment_newSetters.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Compartment_create(2, 4) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLErrorLog.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint.c: In function 'void ConstraintTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint.c:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("Constraint_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint.c: In function 'void test_Constraint_setMath_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint.c:143:10: warning: too many arguments for format [-Wformat-extra-args] 143 | fail("Constraint_setMath(C, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint.c: In function 'void test_Constraint_setMessage_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint.c:187:10: warning: too many arguments for format [-Wformat-extra-args] 187 | fail("Constraint_unsetMessage(C) did not clear XMLNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLInputStream.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLNamespaces.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLNamespaces.c:45: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLNamespaces.c: In function 'void XMLNamespacesTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLNamespaces.c:61:10: warning: too many arguments for format [-Wformat-extra-args] 61 | fail("XMLNamespacesTest_setup() failed to create a XMLNamespaces object."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint_newSetters.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint_newSetters.c: In function 'void ConstraintTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint_newSetters.c:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("Constraint_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint_newSetters.c: In function 'void test_Constraint_setMessage1_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint_newSetters.c:137:10: warning: too many arguments for format [-Wformat-extra-args] 137 | fail("Constraint_unsetMessage(C) did not clear XMLNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint_newSetters.c: In function 'void test_Constraint_setMessage2_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestConstraint_newSetters.c:184:10: warning: too many arguments for format [-Wformat-extra-args] 184 | fail("Constraint_unsetMessage(C) did not clear XMLNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 93%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLNode_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestDelay.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestDelay.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestDelay.c: In function 'void DelayTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestDelay.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("Delay_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestDelay.c: In function 'void test_Delay_setMath_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestDelay.c:166:10: warning: too many arguments for format [-Wformat-extra-args] 166 | fail("Delay_setMath(D, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLOutputStream.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c: In function 'void EventTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("Event_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c: In function 'void test_Event_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:154:10: warning: too many arguments for format [-Wformat-extra-args] 154 | fail("Event_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:166:10: warning: too many arguments for format [-Wformat-extra-args] 166 | fail("Event_setId(E, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c: In function 'void test_Event_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:184:10: warning: too many arguments for format [-Wformat-extra-args] 184 | fail("Event_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:196:10: warning: too many arguments for format [-Wformat-extra-args] 196 | fail("Event_setName(E, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c: In function 'void test_Event_setTrigger_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:216:10: warning: too many arguments for format [-Wformat-extra-args] 216 | fail("Event_setTrigger(...) did not make a copy of trigger."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:228:10: warning: too many arguments for format [-Wformat-extra-args] 228 | fail("Event_setTrigger(E, NULL) did not clear trigger."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c: In function 'void test_Event_setDelay_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:250:10: warning: too many arguments for format [-Wformat-extra-args] 250 | fail("Event_setDelay(...) did not make a copy of Delay."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:262:10: warning: too many arguments for format [-Wformat-extra-args] 262 | fail("Event_setDelay(E, NULL) did not clear Delay."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c: In function 'void test_Event_setTimeUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:283:10: warning: too many arguments for format [-Wformat-extra-args] 283 | fail("Event_setTimeUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent.c:295:10: warning: too many arguments for format [-Wformat-extra-args] 295 | fail("Event_setTimeUnits(E, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLToken.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLToken_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c: In function 'void EventAssignmentTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("EventAssignment_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c: In function 'void test_EventAssignment_setVariable_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("EventAssignment_setVariable(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("EventAssignment_setVariable(EA, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c: In function 'void test_EventAssignment_unsetVariable_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c:168:10: warning: too many arguments for format [-Wformat-extra-args] 168 | fail("EventAssignment_setVariable(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c:176:10: warning: too many arguments for format [-Wformat-extra-args] 176 | fail("EventAssignment_unsetVariable(EA) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c: In function 'void test_EventAssignment_setMath_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment.c:218:10: warning: too many arguments for format [-Wformat-extra-args] 218 | fail("EventAssignment_setMath(EA, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 94%] Building CXX object src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/include/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/.. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -MF CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o.d -o CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test/TestXMLTriple.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 94%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment_newSetters.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment_newSetters.c: In function 'void EventAssignmentTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEventAssignment_newSetters.c:75:10: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("EventAssignment_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent_newSetters.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent_newSetters.c: In function 'void EventTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestEvent_newSetters.c:75:10: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("Event_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c: In function 'void FunctionDefinitionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("FunctionDefinition_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c: In function 'void test_FunctionDefinition_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c:207:10: warning: too many arguments for format [-Wformat-extra-args] 207 | fail("FunctionDefinition_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c:219:10: warning: too many arguments for format [-Wformat-extra-args] 219 | fail("FunctionDefinition_setId(FD, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c: In function 'void test_FunctionDefinition_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c:237:10: warning: too many arguments for format [-Wformat-extra-args] 237 | fail("FunctionDefinition_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c:249:10: warning: too many arguments for format [-Wformat-extra-args] 249 | fail("FunctionDefinition_setName(FD, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c: In function 'void test_FunctionDefinition_setMath_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition.c:291:10: warning: too many arguments for format [-Wformat-extra-args] 291 | fail("FunctionDefinition_setMath(FD, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition_newSetters.c:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition_newSetters.c: In function 'void FunctionDefinitionTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestFunctionDefinition_newSetters.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("FunctionDefinition_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c: In function 'void InitialAssignmentTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("InitialAssignment_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c: In function 'void test_InitialAssignment_setSymbol_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c:135:10: warning: too many arguments for format [-Wformat-extra-args] 135 | fail("InitialAssignment_setSymbol(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c:147:10: warning: too many arguments for format [-Wformat-extra-args] 147 | fail("InitialAssignment_setSymbol(IA, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c: In function 'void test_InitialAssignment_unsetSymbol_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c:165:10: warning: too many arguments for format [-Wformat-extra-args] 165 | fail("InitialAssignment_setSymbol(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c:173:10: warning: too many arguments for format [-Wformat-extra-args] 173 | fail("InitialAssignment_unsetSymbol(IA, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c: In function 'void test_InitialAssignment_setMath_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment.c:214:10: warning: too many arguments for format [-Wformat-extra-args] 214 | fail("InitialAssignment_setMath(IA, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment_newSetters.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment_newSetters.c: In function 'void InitialAssignmentTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestInitialAssignment_newSetters.c:75:10: warning: too many arguments for format [-Wformat-extra-args] 75 | fail("InitialAssignment_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw.c: In function 'void KineticLawTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw.c:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("KineticLaw_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw.c: In function 'void test_KineticLaw_setFormula_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw.c:197:10: warning: too many arguments for format [-Wformat-extra-args] 197 | fail("KineticLaw_setFormula(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw.c:209:10: warning: too many arguments for format [-Wformat-extra-args] 209 | fail("KineticLaw_setFormula(kl, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw.c: In function 'void test_KineticLaw_setMath_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw.c:288:11: warning: too many arguments for format [-Wformat-extra-args] 288 | fail( "KineticLaw_setMath(kl, NULL) did not clear ASTNode." ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw_newSetters.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw_newSetters.c: In function 'void KineticLawTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestKineticLaw_newSetters.c:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("KineticLaw_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 95%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c: In function 'void L3CompartmentTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("Compartment_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c: In function 'void test_L3_Compartment_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c:130:10: warning: too many arguments for format [-Wformat-extra-args] 130 | fail("Compartment_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c: In function 'void test_L3_Compartment_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("Compartment_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c:159:10: warning: too many arguments for format [-Wformat-extra-args] 159 | fail("Compartment_unsetName(C) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c: In function 'void test_L3_Compartment_units_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c:179:10: warning: too many arguments for format [-Wformat-extra-args] 179 | fail("Compartment_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Compartment.c:188:10: warning: too many arguments for format [-Wformat-extra-args] 188 | fail("Compartment_unsetUnits(C, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Event.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Event.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Event.c: In function 'void L3EventTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Event.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("Event_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Event.c: In function 'void test_L3_Event_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Event.c:123:10: warning: too many arguments for format [-Wformat-extra-args] 123 | fail("Event_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Event.c:132:10: warning: too many arguments for format [-Wformat-extra-args] 132 | fail("Event_unsetId(E) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Event.c: In function 'void test_L3_Event_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Event.c:152:10: warning: too many arguments for format [-Wformat-extra-args] 152 | fail("Event_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Event.c:161:10: warning: too many arguments for format [-Wformat-extra-args] 161 | fail("Event_unsetName(E) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3KineticLaw.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3KineticLaw.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3KineticLaw.c: In function 'void L3KineticLawTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3KineticLaw.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("KineticLaw_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c: In function 'void L3LocalParameterTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("LocalParameter_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c: In function 'void test_L3_LocalParameter_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c:123:10: warning: too many arguments for format [-Wformat-extra-args] 123 | fail("LocalParameter_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c: In function 'void test_L3_LocalParameter_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c:143:10: warning: too many arguments for format [-Wformat-extra-args] 143 | fail("LocalParameter_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c:152:10: warning: too many arguments for format [-Wformat-extra-args] 152 | fail("LocalParameter_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c: In function 'void test_L3_LocalParameter_units_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c:172:10: warning: too many arguments for format [-Wformat-extra-args] 172 | fail("LocalParameter_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3LocalParameter.c:181:10: warning: too many arguments for format [-Wformat-extra-args] 181 | fail("LocalParameter_unsetUnits(P, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c: In function 'void L3ModelTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Model_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c: In function 'void test_L3_Model_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:131:10: warning: too many arguments for format [-Wformat-extra-args] 131 | fail("Model_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:140:10: warning: too many arguments for format [-Wformat-extra-args] 140 | fail("Model_unsetId(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c: In function 'void test_L3_Model_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:160:10: warning: too many arguments for format [-Wformat-extra-args] 160 | fail("Model_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:169:10: warning: too many arguments for format [-Wformat-extra-args] 169 | fail("Model_unsetName(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c: In function 'void test_L3_Model_substanceUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:189:10: warning: too many arguments for format [-Wformat-extra-args] 189 | fail("Model_setSubstanceUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:198:10: warning: too many arguments for format [-Wformat-extra-args] 198 | fail("Model_unsetSubstanceUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c: In function 'void test_L3_Model_timeUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:218:10: warning: too many arguments for format [-Wformat-extra-args] 218 | fail("Model_setTimeUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:227:10: warning: too many arguments for format [-Wformat-extra-args] 227 | fail("Model_unsetTimeUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c: In function 'void test_L3_Model_volumeUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:247:10: warning: too many arguments for format [-Wformat-extra-args] 247 | fail("Model_setVolumeUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:256:10: warning: too many arguments for format [-Wformat-extra-args] 256 | fail("Model_unsetVolumeUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c: In function 'void test_L3_Model_areaUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:276:10: warning: too many arguments for format [-Wformat-extra-args] 276 | fail("Model_setAreaUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:285:10: warning: too many arguments for format [-Wformat-extra-args] 285 | fail("Model_unsetAreaUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c: In function 'void test_L3_Model_lengthUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:305:10: warning: too many arguments for format [-Wformat-extra-args] 305 | fail("Model_setLengthUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:314:10: warning: too many arguments for format [-Wformat-extra-args] 314 | fail("Model_unsetLengthUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c: In function 'void test_L3_Model_extentUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:334:10: warning: too many arguments for format [-Wformat-extra-args] 334 | fail("Model_setExtentUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:343:10: warning: too many arguments for format [-Wformat-extra-args] 343 | fail("Model_unsetExtentUnits(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c: In function 'void test_L3_Model_conversionFactor_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:363:10: warning: too many arguments for format [-Wformat-extra-args] 363 | fail("Model_setConversionFactor(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Model.c:372:10: warning: too many arguments for format [-Wformat-extra-args] 372 | fail("Model_unsetConversionFactor(M) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c: In function 'void L3ParameterTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Parameter_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c: In function 'void test_L3_Parameter_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c:125:10: warning: too many arguments for format [-Wformat-extra-args] 125 | fail("Parameter_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c: In function 'void test_L3_Parameter_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c:145:10: warning: too many arguments for format [-Wformat-extra-args] 145 | fail("Parameter_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c:154:10: warning: too many arguments for format [-Wformat-extra-args] 154 | fail("Parameter_unsetName(P) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c: In function 'void test_L3_Parameter_units_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c:174:10: warning: too many arguments for format [-Wformat-extra-args] 174 | fail("Parameter_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Parameter.c:183:10: warning: too many arguments for format [-Wformat-extra-args] 183 | fail("Parameter_unsetUnits(P, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c: In function 'void L3ReactionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c:71:10: warning: too many arguments for format [-Wformat-extra-args] 71 | fail("Reaction_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c:77:10: warning: too many arguments for format [-Wformat-extra-args] 77 | fail("Reaction_create(3, 2) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c: In function 'void test_L3_Reaction_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c:133:10: warning: too many arguments for format [-Wformat-extra-args] 133 | fail("Reaction_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c: In function 'void test_L3_Reaction_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c:153:10: warning: too many arguments for format [-Wformat-extra-args] 153 | fail("Reaction_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c:162:10: warning: too many arguments for format [-Wformat-extra-args] 162 | fail("Reaction_unsetName(R) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c: In function 'void test_L3_Reaction_compartment_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c:182:10: warning: too many arguments for format [-Wformat-extra-args] 182 | fail("Reaction_setCompartment(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Reaction.c:191:10: warning: too many arguments for format [-Wformat-extra-args] 191 | fail("Reaction_unsetCompartment(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c: In function 'void L3SpeciesTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("Species_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c: In function 'void test_L3_Species_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c:138:10: warning: too many arguments for format [-Wformat-extra-args] 138 | fail("Species_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c: In function 'void test_L3_Species_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c:158:10: warning: too many arguments for format [-Wformat-extra-args] 158 | fail("Species_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c:167:10: warning: too many arguments for format [-Wformat-extra-args] 167 | fail("Species_unsetName(S) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c: In function 'void test_L3_Species_compartment_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c:187:10: warning: too many arguments for format [-Wformat-extra-args] 187 | fail("Species_setCompartment(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c: In function 'void test_L3_Species_substanceUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c:252:10: warning: too many arguments for format [-Wformat-extra-args] 252 | fail("Species_setSubstanceUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c:261:10: warning: too many arguments for format [-Wformat-extra-args] 261 | fail("Species_unsetSubstanceUnits(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c: In function 'void test_L3_Species_conversionFactor_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c:368:10: warning: too many arguments for format [-Wformat-extra-args] 368 | fail("Species_setConversionFactor(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Species.c:377:10: warning: too many arguments for format [-Wformat-extra-args] 377 | fail("Species_unsetConversionFactor(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c: In function 'void L3SpeciesReferenceTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c:67:10: warning: too many arguments for format [-Wformat-extra-args] 67 | fail("SpeciesReference_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c: In function 'void test_L3_SpeciesReference_id_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c:122:10: warning: too many arguments for format [-Wformat-extra-args] 122 | fail("SpeciesReference_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c: In function 'void test_L3_SpeciesReference_name_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c:142:10: warning: too many arguments for format [-Wformat-extra-args] 142 | fail("SpeciesReference_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c:151:10: warning: too many arguments for format [-Wformat-extra-args] 151 | fail("SpeciesReference_unsetName(SR) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c: In function 'void test_L3_SpeciesReference_species_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3SpeciesReference.c:171:10: warning: too many arguments for format [-Wformat-extra-args] 171 | fail("SpeciesReference_setSpecies(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Trigger.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Trigger.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Trigger.c: In function 'void L3TriggerTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Trigger.c:71:10: warning: too many arguments for format [-Wformat-extra-args] 71 | fail("Trigger_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Unit.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Unit.c:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Unit.c: In function 'void L3UnitTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestL3Unit.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Unit_create(3, 1) returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 91%] Linking CXX executable test_sbml_validator cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/validator/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_validator.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_validator.dir/TestConsistencyValidator.cpp.o CMakeFiles/test_sbml_validator.dir/TestFile.cpp.o CMakeFiles/test_sbml_validator.dir/TestValidator.cpp.o -o test_sbml_validator ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Built target test_sbml_validator make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestListOf.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestModel.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestModel.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel.c:47: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel.c: In function 'void ModelTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Model_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel.c: In function 'void test_Model_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel.c:154:10: warning: too many arguments for format [-Wformat-extra-args] 154 | fail("Model_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel.c:166:10: warning: too many arguments for format [-Wformat-extra-args] 166 | fail("Model_setId(M, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel.c: In function 'void test_Model_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel.c:189:10: warning: too many arguments for format [-Wformat-extra-args] 189 | fail("Model_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel.c:201:10: warning: too many arguments for format [-Wformat-extra-args] 201 | fail("Model_setName(M, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel_newSetters.c:65: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel_newSetters.c: In function 'void ModelTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModel_newSetters.c:87:10: warning: too many arguments for format [-Wformat-extra-args] 87 | fail("Model_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModifierSpeciesReference.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModifierSpeciesReference.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModifierSpeciesReference.c: In function 'void ModifierSpeciesReferenceTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModifierSpeciesReference.c:72:11: warning: too many arguments for format [-Wformat-extra-args] 72 | fail( "ModifierSpeciesReference_create() returned a NULL pointer." ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModifierSpeciesReference.c: In function 'void test_ModifierSpeciesReference_setSpecies_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModifierSpeciesReference.c:124:11: warning: too many arguments for format [-Wformat-extra-args] 124 | fail( "ModifierModifierSpeciesReference_setSpecies(...) " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | "did not make a copy of string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModifierSpeciesReference.c:140:11: warning: too many arguments for format [-Wformat-extra-args] 140 | fail( "ModifierModifierSpeciesReference_setSpecies(MSR, NULL) " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 | "did not clear string." ); | ~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModifierSpeciesReference.c: In function 'void test_ModifierSpeciesReference_unsetSpecies_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModifierSpeciesReference.c:162:11: warning: too many arguments for format [-Wformat-extra-args] 162 | fail( "ModifierModifierSpeciesReference_setSpecies(...) " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 | "did not make a copy of string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestModifierSpeciesReference.c:171:11: warning: too many arguments for format [-Wformat-extra-args] 171 | fail( "ModifierModifierSpeciesReference_unsetSpecies(MSR) " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 | "did not clear string." ); | ~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c: In function 'void ParameterTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Parameter_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c: In function 'void test_Parameter_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c:148:10: warning: too many arguments for format [-Wformat-extra-args] 148 | fail("Parameter_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c:160:10: warning: too many arguments for format [-Wformat-extra-args] 160 | fail("Parameter_setId(P, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c: In function 'void test_Parameter_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c:178:10: warning: too many arguments for format [-Wformat-extra-args] 178 | fail("Parameter_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c:190:10: warning: too many arguments for format [-Wformat-extra-args] 190 | fail("Parameter_setName(P, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c: In function 'void test_Parameter_setUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c:208:10: warning: too many arguments for format [-Wformat-extra-args] 208 | fail("Parameter_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter.c:220:10: warning: too many arguments for format [-Wformat-extra-args] 220 | fail("Parameter_setUnits(P, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameterRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameterRule.c:47: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameterRule.c: In function 'void ParameterRuleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameterRule.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("Rule_createAssignment() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameterRule.c: In function 'void test_ParameterRule_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameterRule.c:153:11: warning: too many arguments for format [-Wformat-extra-args] 153 | fail( "ParameterRule_setName(...) did not make a copy of string." ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameterRule.c:168:11: warning: too many arguments for format [-Wformat-extra-args] 168 | fail( "Rule_setVariable(PR, NULL)" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 | " did not clear string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameterRule.c: In function 'void test_ParameterRule_setUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameterRule.c:187:11: warning: too many arguments for format [-Wformat-extra-args] 187 | fail( "Rule_setUnits(...) did not make a copy of string." ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameterRule.c:199:11: warning: too many arguments for format [-Wformat-extra-args] 199 | fail( "Rule_setUnits(PR, NULL) did not clear string." ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter_newSetters.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter_newSetters.c: In function 'void ParameterTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestParameter_newSetters.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Parameter_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestPriority.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestPriority.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestPriority.c: In function 'void PriorityTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestPriority.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Priority_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestPriority.c: In function 'void test_Priority_setMath_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestPriority.c:133:10: warning: too many arguments for format [-Wformat-extra-args] 133 | fail("Priority_setMath(P, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRateRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRateRule.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRateRule.c: In function 'void RateRuleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRateRule.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("RateRule_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRateRule.c: In function 'void test_RateRule_setVariable_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRateRule.c:117:10: warning: too many arguments for format [-Wformat-extra-args] 117 | fail("RateRule_setVariable(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRateRule.c:129:10: warning: too many arguments for format [-Wformat-extra-args] 129 | fail("RateRule_setVariable(RR, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRateRule.c: In function 'void test_RateRule_unsetVariable_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRateRule.c:150:10: warning: too many arguments for format [-Wformat-extra-args] 150 | fail("RateRule_unsetVariable(RR) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c:47: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c: In function 'void ReactionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Reaction_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c: In function 'void test_Reaction_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c:158:10: warning: too many arguments for format [-Wformat-extra-args] 158 | fail("Reaction_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c:170:10: warning: too many arguments for format [-Wformat-extra-args] 170 | fail("Reaction_setId(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c: In function 'void test_Reaction_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c:188:10: warning: too many arguments for format [-Wformat-extra-args] 188 | fail("Reaction_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c:200:10: warning: too many arguments for format [-Wformat-extra-args] 200 | fail("Reaction_setName(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c: In function 'void test_Reaction_compartment_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c:275:10: warning: too many arguments for format [-Wformat-extra-args] 275 | fail("Reaction_setCompartment(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction.c:287:10: warning: too many arguments for format [-Wformat-extra-args] 287 | fail("Reaction_unsetCompartment(r) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction_newSetters.c:52: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction_newSetters.c: In function 'void ReactionTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReaction_newSetters.c:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("Reaction_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile1.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile1.c:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile1.c: In function 'void test_read_l1v1_branch_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile1.c:80:10: warning: too many arguments for format [-Wformat-extra-args] 80 | fail("readSBML(\"l1v1-branch.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile2.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile2.c:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile2.c: In function 'void test_read_l1v1_units_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile2.c:80:10: warning: too many arguments for format [-Wformat-extra-args] 80 | fail("readSBML(\"l1v1-units.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile3.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile3.c:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile3.c: In function 'void test_read_l1v1_rules_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile3.c:81:10: warning: too many arguments for format [-Wformat-extra-args] 81 | fail("readSBML(\"l1v1-rules.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile4.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile4.c:46: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile4.c: In function 'void test_read_l1v1_minimal_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestReadFromFile4.c:76:10: warning: too many arguments for format [-Wformat-extra-args] 76 | fail("readSBML(\"l1v1-minimal.xml\") returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRule.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule.c:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule.c: In function 'void RuleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule.c:71:10: warning: too many arguments for format [-Wformat-extra-args] 71 | fail("Rule_createAlgebraic() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule.c: In function 'void test_Rule_setFormula_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule.c:108:10: warning: too many arguments for format [-Wformat-extra-args] 108 | fail("Rule_setFormula(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule.c:120:10: warning: too many arguments for format [-Wformat-extra-args] 120 | fail("Rule_setFormula(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule.c: In function 'void test_Rule_setMath_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule.c:145:10: warning: too many arguments for format [-Wformat-extra-args] 145 | fail("Rule_setMath(R, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule_newSetters.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule_newSetters.c: In function 'void RuleTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRule_newSetters.c:73:10: warning: too many arguments for format [-Wformat-extra-args] 73 | fail("Rule_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestRunner.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLConvert.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSBMLDocument.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c: In function 'void SpeciesTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("Species_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c: In function 'void test_Species_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:167:10: warning: too many arguments for format [-Wformat-extra-args] 167 | fail("Species_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:179:10: warning: too many arguments for format [-Wformat-extra-args] 179 | fail("Species_setId(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c: In function 'void test_Species_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:197:10: warning: too many arguments for format [-Wformat-extra-args] 197 | fail("Species_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:209:10: warning: too many arguments for format [-Wformat-extra-args] 209 | fail("Species_setName(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c: In function 'void test_Species_setCompartment_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:227:10: warning: too many arguments for format [-Wformat-extra-args] 227 | fail("Species_setCompartment(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:239:10: warning: too many arguments for format [-Wformat-extra-args] 239 | fail("Species_setComartment(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c: In function 'void test_Species_unsetCompartment_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:257:10: warning: too many arguments for format [-Wformat-extra-args] 257 | fail("Species_setCompartment(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:265:10: warning: too many arguments for format [-Wformat-extra-args] 265 | fail("Species_unsetComartment(S) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c: In function 'void test_Species_setSubstanceUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:313:10: warning: too many arguments for format [-Wformat-extra-args] 313 | fail("Species_setSubstanceUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:325:10: warning: too many arguments for format [-Wformat-extra-args] 325 | fail("Species_setSubstanceUnits(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c: In function 'void test_Species_setSpatialSizeUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:345:10: warning: too many arguments for format [-Wformat-extra-args] 345 | fail("Species_setSpatialSizeUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:357:10: warning: too many arguments for format [-Wformat-extra-args] 357 | fail("Species_setSpatialSizeUnits(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c: In function 'void test_Species_setUnits_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:377:10: warning: too many arguments for format [-Wformat-extra-args] 377 | fail("Species_setUnits(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies.c:389:10: warning: too many arguments for format [-Wformat-extra-args] 389 | fail("Species_setUnits(S, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesConcentrationRule.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesConcentrationRule.c:47: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesConcentrationRule.c: In function 'void SpeciesConcentrationRuleTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesConcentrationRule.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Rule_createAssignment() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesConcentrationRule.c: In function 'void test_SpeciesConcentrationRule_setSpecies_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesConcentrationRule.c:148:11: warning: too many arguments for format [-Wformat-extra-args] 148 | fail( "SpeciesConcentrationRule_setSpecies(...)" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 | " did not make a copy of string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesConcentrationRule.c:163:11: warning: too many arguments for format [-Wformat-extra-args] 163 | fail( "SpeciesConcentrationRule_setSpecies(SCR, NULL)" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 | " did not clear string." ); | ~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c:53: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c: In function 'void SpeciesReferenceTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c:74:10: warning: too many arguments for format [-Wformat-extra-args] 74 | fail("SpeciesReference_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c: In function 'void test_SpeciesReference_setSpecies_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c:162:10: warning: too many arguments for format [-Wformat-extra-args] 162 | fail("SpeciesReference_setSpecies(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c:174:10: warning: too many arguments for format [-Wformat-extra-args] 174 | fail("SpeciesReference_setSpecies(SR, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c: In function 'void test_SpeciesReference_unsetSpecies_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c:192:10: warning: too many arguments for format [-Wformat-extra-args] 192 | fail("SpeciesReference_setSpecies(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c:200:10: warning: too many arguments for format [-Wformat-extra-args] 200 | fail("SpeciesReference_unsetSpecies(SR) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c: In function 'void test_SpeciesReference_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c:218:10: warning: too many arguments for format [-Wformat-extra-args] 218 | fail("SpeciesReference_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference.c:230:10: warning: too many arguments for format [-Wformat-extra-args] 230 | fail("SpeciesReference_setId(SR, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference_newSetters.c:52: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference_newSetters.c: In function 'void SpeciesReferenceTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesReference_newSetters.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("SpeciesReference_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType.c: In function 'void SpeciesTypeTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("SpeciesType_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType.c: In function 'void test_SpeciesType_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType.c:139:10: warning: too many arguments for format [-Wformat-extra-args] 139 | fail("SpeciesType_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType.c:151:10: warning: too many arguments for format [-Wformat-extra-args] 151 | fail("SpeciesType_setId(CT, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType.c: In function 'void test_SpeciesType_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType.c:169:10: warning: too many arguments for format [-Wformat-extra-args] 169 | fail("SpeciesType_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType.c:181:10: warning: too many arguments for format [-Wformat-extra-args] 181 | fail("SpeciesType_setName(CT, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType_newSetters.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType_newSetters.c: In function 'void SpeciesTypeTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpeciesType_newSetters.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("SpeciesType_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 95%] Linking CXX executable test_sbml_xml cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_xml.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_xml.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLAttributes.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLError.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLExceptions.cpp.o CMakeFiles/test_sbml_xml.dir/TestXMLNode.cpp.o CMakeFiles/test_sbml_xml.dir/TestRunner.c.o CMakeFiles/test_sbml_xml.dir/TestXMLAttributesC.c.o CMakeFiles/test_sbml_xml.dir/TestXMLErrorC.c.o CMakeFiles/test_sbml_xml.dir/TestXMLErrorLog.c.o CMakeFiles/test_sbml_xml.dir/TestXMLInputStream.c.o CMakeFiles/test_sbml_xml.dir/TestXMLNamespaces.c.o CMakeFiles/test_sbml_xml.dir/TestXMLNode_newSetters.c.o CMakeFiles/test_sbml_xml.dir/TestXMLOutputStream.c.o CMakeFiles/test_sbml_xml.dir/TestXMLToken.c.o CMakeFiles/test_sbml_xml.dir/TestXMLToken_newSetters.c.o CMakeFiles/test_sbml_xml.dir/TestXMLTriple.c.o -o test_sbml_xml ../../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Built target test_sbml_xml make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies_newSetters.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies_newSetters.c: In function 'void SpeciesTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSpecies_newSetters.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("Species_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestStoichiometryMath.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestStoichiometryMath.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestStoichiometryMath.c: In function 'void StoichiometryMathTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestStoichiometryMath.c:72:10: warning: too many arguments for format [-Wformat-extra-args] 72 | fail("StoichiometryMath_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestStoichiometryMath.c: In function 'void test_StoichiometryMath_setMath_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestStoichiometryMath.c:166:10: warning: too many arguments for format [-Wformat-extra-args] 166 | fail("StoichiometryMath_setMath(D, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestSyntaxChecker.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestTrigger.c In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestTrigger.c:51: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestTrigger.c: In function 'void TriggerTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestTrigger.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Trigger_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestTrigger.c: In function 'void test_Trigger_setMath_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestTrigger.c:164:10: warning: too many arguments for format [-Wformat-extra-args] 164 | fail("Trigger_setMath(D, NULL) did not clear ASTNode."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnit.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnit.c:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnit.c: In function 'void UnitTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnit.c:70:10: warning: too many arguments for format [-Wformat-extra-args] 70 | fail("Unit_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition.c:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition.c: In function 'void UnitDefinitionTest_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("UnitDefinition_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition.c: In function 'void test_UnitDefinition_setId_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition.c:164:10: warning: too many arguments for format [-Wformat-extra-args] 164 | fail("UnitDefinition_setId(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition.c:176:10: warning: too many arguments for format [-Wformat-extra-args] 176 | fail("UnitDefinition_setId(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition.c: In function 'void test_UnitDefinition_setName_fn(int)': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition.c:194:10: warning: too many arguments for format [-Wformat-extra-args] 194 | fail("UnitDefinition_setName(...) did not make a copy of string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition.c:206:10: warning: too many arguments for format [-Wformat-extra-args] 206 | fail("UnitDefinition_setName(R, NULL) did not clear string."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition_newSetters.c:50: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition_newSetters.c: In function 'void UnitDefinitionTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitDefinition_newSetters.c:69:10: warning: too many arguments for format [-Wformat-extra-args] 69 | fail("UnitDefinition_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnitKind.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Building CXX object src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -MD -MT src/sbml/test/CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -MF CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o.d -o CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnit_newSetters.c make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In file included from /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnit_newSetters.c:49: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnit_newSetters.c: In function 'void UnitTest1_setup()': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test/TestUnit_newSetters.c:68:10: warning: too many arguments for format [-Wformat-extra-args] 68 | fail("Unit_create() returned a NULL pointer."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Linking CXX executable test_sbml_sbml cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sbml_sbml.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -rdynamic CMakeFiles/test_sbml_sbml.dir/TestAncestor.cpp.o CMakeFiles/test_sbml_sbml.dir/TestAttributeFunctions.cpp.o CMakeFiles/test_sbml_sbml.dir/TestConsistencyChecks.cpp.o CMakeFiles/test_sbml_sbml.dir/TestCopyAndClone.cpp.o CMakeFiles/test_sbml_sbml.dir/TestGetMultipleObjects.cpp.o CMakeFiles/test_sbml_sbml.dir/TestInternalConsistencyChecks.cpp.o CMakeFiles/test_sbml_sbml.dir/TestLevelCompatibility.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile5.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile6.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile7.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile8.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile9.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL2V5.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_1.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_2.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_3.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_4.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_5.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFileL3V2_6.cpp.o CMakeFiles/test_sbml_sbml.dir/TestReadSBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRemoveFromParent.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRenameIDs.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRequiredAttributes.cpp.o CMakeFiles/test_sbml_sbml.dir/TestRequiredElements.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConstructorException.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertFromL3V2.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvertStrict.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLError.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLNamespaces.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLParentObject.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLTransforms.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBMLValidators.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBase.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBaseIdName.cpp.o CMakeFiles/test_sbml_sbml.dir/TestSBase_newSetters.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteL3SBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteL3V2SBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestWriteSBML.cpp.o CMakeFiles/test_sbml_sbml.dir/TestAlgebraicRule.c.o CMakeFiles/test_sbml_sbml.dir/TestAssignmentRule.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartment.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentType_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartmentVolumeRule.c.o CMakeFiles/test_sbml_sbml.dir/TestCompartment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestConstraint.c.o CMakeFiles/test_sbml_sbml.dir/TestConstraint_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestDelay.c.o CMakeFiles/test_sbml_sbml.dir/TestEvent.c.o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment.c.o CMakeFiles/test_sbml_sbml.dir/TestEventAssignment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestEvent_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition.c.o CMakeFiles/test_sbml_sbml.dir/TestFunctionDefinition_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment.c.o CMakeFiles/test_sbml_sbml.dir/TestInitialAssignment_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw.c.o CMakeFiles/test_sbml_sbml.dir/TestKineticLaw_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Compartment.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Event.c.o CMakeFiles/test_sbml_sbml.dir/TestL3KineticLaw.c.o CMakeFiles/test_sbml_sbml.dir/TestL3LocalParameter.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Model.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Parameter.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Reaction.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Species.c.o CMakeFiles/test_sbml_sbml.dir/TestL3SpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Trigger.c.o CMakeFiles/test_sbml_sbml.dir/TestL3Unit.c.o CMakeFiles/test_sbml_sbml.dir/TestListOf.c.o CMakeFiles/test_sbml_sbml.dir/TestModel.c.o CMakeFiles/test_sbml_sbml.dir/TestModel_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestModifierSpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestParameter.c.o CMakeFiles/test_sbml_sbml.dir/TestParameterRule.c.o CMakeFiles/test_sbml_sbml.dir/TestParameter_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestPriority.c.o CMakeFiles/test_sbml_sbml.dir/TestRateRule.c.o CMakeFiles/test_sbml_sbml.dir/TestReaction.c.o CMakeFiles/test_sbml_sbml.dir/TestReaction_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile1.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile2.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile3.c.o CMakeFiles/test_sbml_sbml.dir/TestReadFromFile4.c.o CMakeFiles/test_sbml_sbml.dir/TestRule.c.o CMakeFiles/test_sbml_sbml.dir/TestRule_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestRunner.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLConvert.c.o CMakeFiles/test_sbml_sbml.dir/TestSBMLDocument.c.o CMakeFiles/test_sbml_sbml.dir/TestSpecies.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesConcentrationRule.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesReference_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType.c.o CMakeFiles/test_sbml_sbml.dir/TestSpeciesType_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestSpecies_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestStoichiometryMath.c.o CMakeFiles/test_sbml_sbml.dir/TestSyntaxChecker.c.o CMakeFiles/test_sbml_sbml.dir/TestTrigger.c.o CMakeFiles/test_sbml_sbml.dir/TestUnit.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitDefinition_newSetters.c.o CMakeFiles/test_sbml_sbml.dir/TestUnitKind.c.o CMakeFiles/test_sbml_sbml.dir/TestUnit_newSetters.c.o -o test_sbml_sbml ../../libsbml-static.a -lcheck -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' In function 'strncat', inlined from 'safe_strcat' at /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:206:10: /usr/include/bits/string_fortified.h:136:34: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 136 | return __builtin___strncat_chk (__dest, __src, __len, | ^ /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp: In function 'safe_strcat': /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/util.cpp:200:24: note: length computed here 200 | len2 = (int)strlen(str2); | ^ make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target test_sbml_sbml make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_lib.dir/build.make src/bindings/r/CMakeFiles/binding_r_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/CMakeFiles/binding_r_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_lib.dir/build.make src/bindings/r/CMakeFiles/binding_r_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Building CXX object src/bindings/r/CMakeFiles/binding_r_lib.dir/libsbml_wrap.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_r_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r/../swig -I/builddir/build/BUILD/libSBML-5.19.0-Source/include -I/usr/include/R -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/bindings/r/CMakeFiles/binding_r_lib.dir/libsbml_wrap.cpp.o -MF CMakeFiles/binding_r_lib.dir/libsbml_wrap.cpp.o.d -o CMakeFiles/binding_r_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp: In function 'int _p_f_p_q_const__ASTNode__int(const ASTNode_t*)': /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp:108947:7: warning: unused variable 'ecode' [-Wunused-variable] 108947 | int ecode = 0; | ^~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp: In function 'int _p_f_p_Model_p_SBMLErrorLog_p_void__int(Model*, SBMLErrorLog*, void*)': /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp:132560:7: warning: unused variable 'ecode' [-Wunused-variable] 132560 | int ecode = 0; | ^~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp: In function 'R_swig_Transformation_setMatrix': /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp:249042:7: warning: 'arg2' may be used uninitialized [-Wmaybe-uninitialized] 249042 | free(arg2); | ~~~~^~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp: In function 'R_swig_Transformation2D_setMatrix2D': /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp:249752:7: warning: 'arg2' may be used uninitialized [-Wmaybe-uninitialized] 249752 | free(arg2); | ~~~~^~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp: In function 'R_swig_Transformation2D_setMatrix': /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libsbml_wrap.cpp:249796:7: warning: 'arg2' may be used uninitialized [-Wmaybe-uninitialized] 249796 | free(arg2); | ~~~~^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Linking CXX shared library libSBML.so cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_r_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -shared -Wl,-soname,libSBML.so -o libSBML.so CMakeFiles/binding_r_lib.dir/libsbml_wrap.cpp.o -L/usr/lib64/R/lib ../../libsbml-static.a -lR -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_r_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_package.dir/build.make src/bindings/r/CMakeFiles/binding_r_package.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/CMakeFiles/binding_r_package.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_package.dir/build.make src/bindings/r/CMakeFiles/binding_r_package.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 98%] Building CXX object src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_ruby_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby/../swig -I/builddir/build/BUILD/libSBML-5.19.0-Source/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o -MF CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o.d -o CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = long int]': /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5001:116: required from here /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4027:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4027 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4027:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4027 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = int]': /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:5123:118: required from here /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4027:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4027 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/libsbml_wrap.cpp:4027:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 4027 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Building CXX object src/bindings/python/CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_python_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/sbml 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/../swig -I/builddir/build/BUILD/libSBML-5.19.0-Source/include -I/usr/include/python3.10 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/bindings/python/CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o -MF CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o.d -o CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/libsbml_wrap.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Linking CXX shared library libSBML.so cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_ruby_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -shared -Wl,-soname,libSBML.so -o libSBML.so CMakeFiles/binding_ruby_lib.dir/libsbml_wrap.cpp.o ../../libsbml-static.a -lruby -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_ruby_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 92%] Building CXX object src/bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl && /usr/bin/g++ -DLIBSBML_COMPILED_IN_SRC -DLINUX -DUSE_BZ2 -DUSE_COMP -DUSE_FBC=1 -DUSE_GROUPS -DUSE_L3V2EXTENDEDMATH -DUSE_LAYOUT -DUSE_LIBXML -DUSE_MULTI -DUSE_QUAL -DUSE_RENDER -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src -I/usr/lib64/perl5/CORE -I/builddir/build/BUILD/libSBML-5.19.0-Source/include -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/../swig -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/common 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-I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/constraints -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/common -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/extension -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/util -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator -I/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/constraints -I/usr/include/libxml2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -fPIC -MD -MT src/bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o -MF CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o.d -o CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o -c /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl/LibSBML.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Linking CXX shared library _libsbml.so cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -shared -Wl,-soname,_libsbml.so -o _libsbml.so CMakeFiles/binding_python_lib.dir/libsbml_wrap.cpp.o ../../libsbml-static.a -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_python_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Create R Package (64bit) cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML.so /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML/inst/libs cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML.R /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML/R cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/cmake -DR_INTERPRETER="/usr/bin/R" -P /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r/create-r-package.cmake -- Created package: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML_5.19.0_R_aarch64-redhat-linux-gnu.tar.gz make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [100%] Built target binding_r_package make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Linking CXX shared module LibSBML.so cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_perl_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -shared -o LibSBML.so CMakeFiles/binding_perl_lib.dir/LibSBML.cpp.o ../../libsbml-static.a -lperl -lbz2 -lz -lminizip -lz -lxml2 make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [100%] Built target binding_perl_lib make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.19.0-Source/build/CMakeFiles 0 make: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' + /usr/bin/make -O -j4 V=1 VERBOSE=1 -C build libsbml.pc make: Nothing to be done for 'libsbml.pc'. + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.L3DHhP + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64 ++ dirname /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64 + cd libSBML-5.19.0-Source + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/cmake -S/builddir/build/BUILD/libSBML-5.19.0-Source -B/builddir/build/BUILD/libSBML-5.19.0-Source/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.19.0-Source/build/CMakeFiles /builddir/build/BUILD/libSBML-5.19.0-Source/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/CMakeFiles/sbml.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target sbml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/CMakeFiles/sbml.dir/build.make src/CMakeFiles/sbml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/CMakeFiles/sbml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 35%] Built target sbml /usr/bin/make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/CMakeFiles/sbml-static.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target sbml-static make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/CMakeFiles/sbml-static.dir/build.make src/CMakeFiles/sbml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/CMakeFiles/sbml-static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 69%] Built target sbml-static /usr/bin/make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_comp_extensions make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build.make src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/comp/extension/test/CMakeFiles/test_comp_extensions.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 70%] Built target test_comp_extensions /usr/bin/make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_comp_sbase make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build.make src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/comp/sbml/test/CMakeFiles/test_comp_sbase.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 71%] Built target test_comp_sbase /usr/bin/make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_comp_util make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build.make src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/comp/util/test/CMakeFiles/test_comp_util.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Built target test_comp_util /usr/bin/make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_comp_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build.make src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/comp/validator/test/CMakeFiles/test_comp_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Built target test_comp_validator /usr/bin/make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_package_fbc make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build.make src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/fbc/extension/test/CMakeFiles/test_sbml_package_fbc.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 72%] Built target test_sbml_package_fbc /usr/bin/make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_fbc_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build.make src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/fbc/validator/test/CMakeFiles/test_fbc_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Built target test_fbc_validator /usr/bin/make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_extension_package_groups make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build.make src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/groups/extension/test/CMakeFiles/test_extension_package_groups.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Built target test_extension_package_groups /usr/bin/make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_groups_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build.make src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/groups/validator/test/CMakeFiles/test_groups_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Built target test_groups_validator /usr/bin/make -f src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/build.make src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_l3v2extendedmath_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/build.make src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/l3v2extendedmath/validator/test/CMakeFiles/test_l3v2extendedmath_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 73%] Built target test_l3v2extendedmath_validator /usr/bin/make -f src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/build.make src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_extension_package_l3v2extendedmath make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/build.make src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/l3v2extendedmath/extension/test/CMakeFiles/test_extension_package_l3v2extendedmath.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 74%] Built target test_extension_package_l3v2extendedmath /usr/bin/make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_package_layout make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build.make src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/layout/sbml/test/CMakeFiles/test_sbml_package_layout.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 76%] Built target test_sbml_package_layout /usr/bin/make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_layout_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build.make src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/layout/validator/test/CMakeFiles/test_layout_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Built target test_layout_validator /usr/bin/make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_package_multi make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build.make src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/multi/extension/test/CMakeFiles/test_sbml_package_multi.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Built target test_sbml_package_multi /usr/bin/make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_multi_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build.make src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/multi/validator/test/CMakeFiles/test_multi_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Built target test_multi_validator /usr/bin/make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_extension_package_qual make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build.make src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/qual/extension/test/CMakeFiles/test_extension_package_qual.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 77%] Built target test_extension_package_qual /usr/bin/make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_package_qual make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build.make src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/qual/sbml/test/CMakeFiles/test_sbml_package_qual.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Built target test_sbml_package_qual /usr/bin/make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_qual_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build.make src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/qual/validator/test/CMakeFiles/test_qual_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 78%] Built target test_qual_validator /usr/bin/make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_package_render make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build.make src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/render/sbml/test/CMakeFiles/test_sbml_package_render.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 81%] Built target test_sbml_package_render /usr/bin/make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_render_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build.make src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/packages/render/validator/test/CMakeFiles/test_render_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 82%] Built target test_render_validator /usr/bin/make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_annotation make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build.make src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/annotation/test/CMakeFiles/test_sbml_annotation.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 83%] Built target test_sbml_annotation /usr/bin/make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_conversion make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build.make src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/conversion/test/CMakeFiles/test_sbml_conversion.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 84%] Built target test_sbml_conversion /usr/bin/make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_extension make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build.make src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/extension/test/CMakeFiles/test_sbml_extension.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 85%] Built target test_sbml_extension /usr/bin/make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test/CMakeFiles/test_sbml_math.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_math make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build.make src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/math/test/CMakeFiles/test_sbml_math.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 87%] Built target test_sbml_math /usr/bin/make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test/CMakeFiles/test_sbml_sbml.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_sbml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build.make src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/test/CMakeFiles/test_sbml_sbml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 95%] Built target test_sbml_sbml /usr/bin/make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test/CMakeFiles/test_sbml_units.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_units make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build.make src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/units/test/CMakeFiles/test_sbml_units.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 96%] Built target test_sbml_units /usr/bin/make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/util/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test/CMakeFiles/test_sbml_util.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_util make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build.make src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/util/test/CMakeFiles/test_sbml_util.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Built target test_sbml_util /usr/bin/make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/validator/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_validator make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build.make src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/validator/test/CMakeFiles/test_sbml_validator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 97%] Built target test_sbml_validator /usr/bin/make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target test_sbml_xml make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build.make src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/sbml/xml/test/CMakeFiles/test_sbml_xml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target test_sbml_xml /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/bindings/perl/CMakeFiles/binding_perl_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_perl_swig /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target binding_perl_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/bindings/perl/CMakeFiles/binding_perl_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_perl_lib /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_swig.dir/build.make src/bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/bindings/python/CMakeFiles/binding_python_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_python_swig /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target binding_python_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/python/CMakeFiles/binding_python_lib.dir/build.make src/bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/bindings/python/CMakeFiles/binding_python_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_python_lib /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_ruby_swig /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/ruby /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target binding_ruby_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_ruby_lib /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_swig.dir/build.make src/bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_swig.dir/build.make src/bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/bindings/r/CMakeFiles/binding_r_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_r_swig /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_lib.dir/build.make src/bindings/r/CMakeFiles/binding_r_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/CMakeFiles/binding_r_lib.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target binding_r_lib make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_lib.dir/build.make src/bindings/r/CMakeFiles/binding_r_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[2]: Nothing to be done for 'src/bindings/r/CMakeFiles/binding_r_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Built target binding_r_lib /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_package.dir/build.make src/bindings/r/CMakeFiles/binding_r_package.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' cd /builddir/build/BUILD/libSBML-5.19.0-Source/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSBML-5.19.0-Source /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/CMakeFiles/binding_r_package.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/make -f src/bindings/r/CMakeFiles/binding_r_package.dir/build.make src/bindings/r/CMakeFiles/binding_r_package.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [ 99%] Create R Package (64bit) cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML.so /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML/inst/libs cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML.R /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML/R cd /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r && /usr/bin/cmake -DR_INTERPRETER="/usr/bin/R" -P /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/r/create-r-package.cmake -- Created package: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML_5.19.0_R_aarch64-redhat-linux-gnu.tar.gz make[2]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' [100%] Built target binding_r_package make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSBML-5.19.0-Source/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/libsbml/COPYING.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/libsbml/FUNDING.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/libsbml/LICENSE.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/libsbml/NEWS.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/libsbml/README.md -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/libsbml/VERSION.txt -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/pkgconfig/libsbml.pc -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/common/CompExtensionTypes.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/common/compfwd.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/extension/CompExtension.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/extension/CompModelPlugin.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/extension/CompSBasePlugin.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/sbml/CompBase.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/sbml/Deletion.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/sbml/ExternalModelDefinition.h -- 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/builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/sbml/Port.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/sbml/ReplacedBy.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/sbml/ReplacedElement.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/sbml/Replacing.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/sbml/SBaseRef.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/sbml/Submodel.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/util/CompFlatteningConverter.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/util/SBMLFileResolver.h -- Installing: 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/builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/comp/validator/constraints/UnitReplacementCheck.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/common/FbcExtensionTypes.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/common/fbcfwd.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/extension/FbcExtension.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/extension/FbcModelPlugin.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/extension/FbcReactionPlugin.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/extension/FbcSpeciesPlugin.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/sbml/Association.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/sbml/FbcAnd.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/sbml/FbcAssociation.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/sbml/FbcOr.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/sbml/FluxBound.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/sbml/FluxObjective.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/packages/fbc/sbml/GeneAssociation.h -- Installing: 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/builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/xml/XMLTriple.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/xml/XercesAttributes.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/xml/XercesHandler.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/xml/XercesNamespaces.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/xml/XercesParser.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/xml/XercesTranscode.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/AlgebraicRule.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/AssignmentRule.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Compartment.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/CompartmentType.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Constraint.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Delay.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Event.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/EventAssignment.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/ExpectedAttributes.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/FunctionDefinition.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/InitialAssignment.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/KineticLaw.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/ListOf.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/LocalParameter.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Model.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/ModifierSpeciesReference.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Parameter.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Priority.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/RateRule.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Reaction.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Rule.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLConstructorException.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLDocument.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLError.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLErrorLog.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLErrorTable.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLNamespaces.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLReader.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLTransforms.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLTypeCodes.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLTypes.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLVisitor.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBMLWriter.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBO.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SBase.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SimpleSpeciesReference.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Species.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SpeciesReference.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SpeciesType.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/StoichiometryMath.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/SyntaxChecker.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Trigger.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/Unit.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/UnitDefinition.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/UnitKind.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/common/libsbml-config-common.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/common/libsbml-config-packages.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/common/libsbml-namespace.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/common/libsbml-package.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/common/libsbml-version.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/include/sbml/extension/RegisterExtensions.h -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/libsbml.so.5.19.0 -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/libsbml.so.5 -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/libsbml.so -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/cmake/sbml-config.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/cmake/sbml-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/cmake/sbml-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/libsbml-static.a -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/cmake/sbml-static-config.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/cmake/sbml-static-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/cmake/sbml-static-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/perl5/vendor_perl/LibSBML.pod -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/perl5/vendor_perl/LibSBML.pm -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/perl5/vendor_perl/auto/libSBML/LibSBML.so -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/python3.10/site-packages/libsbml/_libsbml.so -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/python3.10/site-packages/libsbml.pth -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/python3.10/site-packages/libsbml/libsbml.py -- Installing: /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/ruby/vendor_ruby/libSBML.so Notice: the libSBML R interface must be installed separately. To install it, please execute the following shell command: R CMD INSTALL /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/r/libSBML_5.19.0_R_aarch64-redhat-linux-gnu.tar.gz make: Leaving directory '/builddir/build/BUILD/libSBML-5.19.0-Source/build' + rm -rf /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/libsbml + mkdir -p /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/R/library + R CMD INSTALL -l /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/R/library build/src/bindings/r/libSBML_5.19.0_R_aarch64-redhat-linux-gnu.tar.gz * installing *binary* package 'libSBML' ... * DONE (libSBML) + rm -rf /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/R/library/libSBML/R.css + install -Dm0644 src/bindings/ruby/README.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/doc/libsbml/README-ruby.txt + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 5.19.0-9.fc36 --unique-debug-suffix -5.19.0-9.fc36.aarch64 --unique-debug-src-base libsbml-5.19.0-9.fc36.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/libSBML-5.19.0-Source extracting debug info from /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/R/library/libSBML/libs/libSBML.so extracting debug info from /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/python3.10/site-packages/libsbml/_libsbml.so extracting debug info from /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/libsbml.so.5.19.0 extracting debug info from /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/perl5/vendor_perl/auto/libSBML/LibSBML.so extracting debug info from /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/ruby/vendor_ruby/libSBML.so original debug info size: 564984kB, size after compression: 377452kB /usr/bin/sepdebugcrcfix: Updated 5 CRC32s, 0 CRC32s did match. cpio: build/src/L3Parser.cpp: Cannot stat: No such file or directory cpio: build/src/L3Parser.ypp: Cannot stat: No such file or directory 137958 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib/debug/usr/lib64/python3.10 using python3.10 Bytecompiling .py files below /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/lib64/python3.10 using python3.10 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.regyMD + umask 022 + cd /builddir/build/BUILD ~/build/BUILD/libSBML-5.19.0-Source/build ~/build/BUILD/libSBML-5.19.0-Source + cd libSBML-5.19.0-Source + pushd build + ctest --force-new-ctest-process -VV -E test_ruby_binding UpdateCTestConfiguration from :/builddir/build/BUILD/libSBML-5.19.0-Source/build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/libSBML-5.19.0-Source/build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/libSBML-5.19.0-Source/build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/libSBML-5.19.0-Source/build/DartConfiguration.tcl Test project /builddir/build/BUILD/libSBML-5.19.0-Source/build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test_comp_extensions_run 1: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/extension/test/test_comp_extensions 1: Environment variables: 1: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/extension/test 1: Test timeout computed to be: 3000 1: Running suite(s): SBMLCompExtensionObjects 1: TestMultipleNamespaces 1: SBMLCompCheckConsistency 1: 100%: Checks: 14, Failures: 0, Errors: 0 1/69 Test #1: test_comp_extensions_run ...................... Passed 0.56 sec test 2 Start 2: test_comp_sbase_run 2: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/sbml/test/test_comp_sbase 2: Environment variables: 2: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/sbml/test 2: Test timeout computed to be: 3000 2: Running suite(s): SBMLCompSBaseObjects 2: SBMLCompIdNamspace 2: SBMLCompSBaseObjects 2: comp_deletion 2: comp_externalModelDefinition 2: comp_modelDefinition 2: comp_port 2: comp_replacedBy 2: comp_replacedElement 2: comp_sBaseRef 2: comp_submodel 2: 100%: Checks: 105, Failures: 0, Errors: 0 2/69 Test #2: test_comp_sbase_run ........................... Passed 0.34 sec test 3 Start 3: test_comp_util_run 3: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/util/test/test_comp_util 3: Environment variables: 3: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/util/test 3: Test timeout computed to be: 3000 3: Running suite(s): SBMLCompURIResolvers 3: SBMLCompLevelVersionConversion 3: SBMLCompFlatteningUnknownPackageRefs 3: SBMLCompFlatteningErrorMessages 3: SBMLCompFlatteningConverter 3: ExternalModelResolving 3: SBMLCompFlatteningNewFlags 3: SBMLCompFlatteningConverterStripPackage 3: 100%: Checks: 365, Failures: 0, Errors: 0 3/69 Test #3: test_comp_util_run ............................ Passed 4.13 sec test 4 Start 4: test_comp_validator_run 4: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/comp/validator/test/test_comp_validator "/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/test" 4: Environment variables: 4: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/test 4: Test timeout computed to be: 3000 4: 4: Validator testrunner 4: ==================== 4: using test data from : /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/comp/validator/test/test-data 4: 4: Testing General XML Consistency Constraints (20000 - 29999). 4: 100%: Checks: 280, Failures: 0 4: Testing Id Consistency Constraints (10300 - 10399). 4: 100%: Checks: 14, Failures: 0 4: Testing Unit Consistency Constraints (10500 - 10599). 4: 100%: Checks: 22, Failures: 0 4/69 Test #4: test_comp_validator_run ....................... Passed 0.76 sec test 5 Start 5: test_sbml_package_fbc_run 5: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/extension/test/test_sbml_package_fbc 5: Environment variables: 5: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/extension/test 5: Test timeout computed to be: 3000 5: Running suite(s): FbcExtension 5: WriteFbcExtension 5: ReadFbcExtension 5: FbcAssociation 5: 100%: Checks: 36, Failures: 0, Errors: 0 5/69 Test #5: test_sbml_package_fbc_run ..................... Passed 0.36 sec test 6 Start 6: test_fbc_validator_run 6: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/fbc/validator/test/test_fbc_validator "/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/test" 6: Environment variables: 6: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/test 6: Test timeout computed to be: 3000 6: 6: Validator testrunner 6: ==================== 6: using test data from : /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/fbc/validator/test/test-data 6: 6: Testing General XML Consistency Constraints (20000 - 29999). 6: 100%: Checks: 170, Failures: 0 6: Testing Id Consistency Constraints (10300 - 10399). 6: 100%: Checks: 11, Failures: 0 6/69 Test #6: test_fbc_validator_run ........................ Passed 0.48 sec test 7 Start 7: test_extension_package_groups_run 7: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/extension/test/test_extension_package_groups 7: Environment variables: 7: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/extension/test 7: Test timeout computed to be: 3000 7: Running suite(s): GroupsExtension 7: WriteGroupsExtension 7: ReadGroupsExtension 7: GroupsModelPlugin 7: 100%: Checks: 25, Failures: 0, Errors: 0 7/69 Test #7: test_extension_package_groups_run ............. Passed 0.19 sec test 8 Start 8: test_groups_validator_run 8: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/groups/validator/test/test_groups_validator "/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/test" 8: Environment variables: 8: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/test 8: Test timeout computed to be: 3000 8: 8: Validator testrunner 8: ==================== 8: using test data from : /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/groups/validator/test/test-data 8: 8: Testing General XML Consistency Constraints (20000 - 29999). 8: 100%: Checks: 95, Failures: 0 8: Testing Id Consistency Constraints (10300 - 10399). 8: 100%: Checks: 11, Failures: 0 8/69 Test #8: test_groups_validator_run ..................... Passed 0.21 sec test 9 Start 9: test_l3v2extendedmath_validator_run 9: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/validator/test/test_l3v2extendedmath_validator "/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/test" 9: Environment variables: 9: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/test 9: Test timeout computed to be: 3000 9: 9: Validator testrunner 9: ==================== 9: using test data from : /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/validator/test/test-data 9: 9: Testing MathML Consistency Constraints (10200 - 10299). 9: 100%: Checks: 4, Failures: 0 9: Testing Unit Consistency Constraints (10500 - 10599). 9: 100%: Checks: 6, Failures: 0 9/69 Test #9: test_l3v2extendedmath_validator_run ........... Passed 0.16 sec test 10 Start 10: test_extension_package_l3v2extendedmath_run 10: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/l3v2extendedmath/extension/test/test_extension_package_l3v2extendedmath 10: Environment variables: 10: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/l3v2extendedmath/extension/test 10: Test timeout computed to be: 3000 10: Running suite(s): L3v2EMExtension 10: WriteL3v2EMExtension 10: ReadL3v2EMExtension 10: ReadWriteL3v2Infix 10: 100%: Checks: 18, Failures: 0, Errors: 0 10/69 Test #10: test_extension_package_l3v2extendedmath_run ... Passed 0.18 sec test 11 Start 11: test_sbml_package_layout_run 11: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/sbml/test/test_sbml_package_layout 11: Environment variables: 11: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/sbml/test 11: Test timeout computed to be: 3000 11: Running suite(s): Point 11: Dimensions 11: BoundingBox 11: LineSegment 11: CubicBezier 11: Curve 11: GraphicalObject 11: CompartmentGlyph 11: SpeciesGlyph 11: ReactionGlyph 11: GeneralGlyph 11: ReferenceGlyph 11: SpeciesReferenceGlyph 11: TextGlyph 11: Layout 11: LayoutCreation 11: LayoutFormatter 11: SBMLHandler 11: LayoutWriting 11: 100%: Checks: 288, Failures: 0, Errors: 0 11/69 Test #11: test_sbml_package_layout_run .................. Passed 0.78 sec test 12 Start 12: test_layout_validator_run 12: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/layout/validator/test/test_layout_validator "/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/test" 12: Environment variables: 12: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/test 12: Test timeout computed to be: 3000 12: 12: Validator testrunner 12: ==================== 12: using test data from : /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/layout/validator/test/test-data 12: 12: Testing General XML Consistency Constraints (20000 - 29999). 12: 100%: Checks: 223, Failures: 0 12: Testing Id Consistency Constraints (10300 - 10399). 12: 100%: Checks: 18, Failures: 0 12/69 Test #12: test_layout_validator_run ..................... Passed 0.88 sec test 13 Start 13: test_sbml_package_multi_run 13: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/extension/test/test_sbml_package_multi 13: Environment variables: 13: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/extension/test 13: Test timeout computed to be: 3000 13: Running suite(s): MultiExtension 13: MultiCheckConsistency 13: MultiAST 13: 100%: Checks: 16, Failures: 0, Errors: 0 13/69 Test #13: test_sbml_package_multi_run ................... Passed 0.22 sec test 14 Start 14: test_multi_validator_run 14: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/multi/validator/test/test_multi_validator "/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/test" 14: Environment variables: 14: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/test 14: Test timeout computed to be: 3000 14: 14: Validator testrunner 14: ==================== 14: using test data from : /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/multi/validator/test/test-data 14: 14: Testing MathML Consistency Constraints (10200 - 10299). 14: 100%: Checks: 5, Failures: 0 14: Testing General XML Consistency Constraints (20000 - 29999). 14: 100%: Checks: 123, Failures: 0 14: Testing Id Consistency Constraints (10300 - 10999). 14: 100%: Checks: 16, Failures: 0 14/69 Test #14: test_multi_validator_run ...................... Passed 0.28 sec test 15 Start 15: test_extension_package_qual_run 15: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/extension/test/test_extension_package_qual 15: Environment variables: 15: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/extension/test 15: Test timeout computed to be: 3000 15: Running suite(s): QualExtension 15: WriteQualExtension 15: ReadQualExtension 15: GetAllElements 15: 100%: Checks: 20, Failures: 0, Errors: 0 15/69 Test #15: test_extension_package_qual_run ............... Passed 0.21 sec test 16 Start 16: test_sbml_package_qual_run 16: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/sbml/test/test_sbml_package_qual 16: Environment variables: 16: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/sbml/test 16: Test timeout computed to be: 3000 16: Running suite(s): Input 16: Output 16: FunctionTerm 16: Transition 16: QualitativeSpecies 16: DefaultTerm 16: ListOfFunctionTerms 16: CopyAndClone 16: 100%: Checks: 73, Failures: 0, Errors: 0 16/69 Test #16: test_sbml_package_qual_run .................... Passed 0.24 sec test 17 Start 17: test_qual_validator_run 17: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/qual/validator/test/test_qual_validator "/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/test" 17: Environment variables: 17: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/test 17: Test timeout computed to be: 3000 17: 17: Validator testrunner 17: ==================== 17: using test data from : /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/qual/validator/test/test-data 17: 17: Testing General XML Consistency Constraints (20000 - 29999). 17: 100%: Checks: 81, Failures: 0 17: Testing Id Consistency Constraints (10300 - 10399). 17: 100%: Checks: 4, Failures: 0 17: Testing Math Consistency Constraints (10200 - 10299). 17: 100%: Checks: 3, Failures: 0 17/69 Test #17: test_qual_validator_run ....................... Passed 0.32 sec test 18 Start 18: test_sbml_package_render_run 18: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/sbml/test/test_sbml_package_render 18: Environment variables: 18: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/sbml/test 18: Test timeout computed to be: 3000 18: Running suite(s): RenderExtension 18: RelAbsVector 18: ColorDefinition 18: GradientStop 18: RenderPoint 18: RenderCubicBezier 18: GradientBaseTest 18: LinearGradient 18: RadialGradient 18: Transformation 18: Transformation2D 18: Image 18: GraphicalPrimitive1D 18: RenderCurve 18: Text 18: GraphicalPrimitive2D 18: Rectangle 18: Ellipse 18: Polygon 18: Group 18: LineEnding 18: Style 18: GlobalStyle 18: LocalStyle 18: RenderInformationBase 18: GlobalRenderInformation 18: LocalRenderInformation 18: RenderReading 18: RenderWriting 18: 100%: Checks: 136, Failures: 0, Errors: 0 18/69 Test #18: test_sbml_package_render_run .................. Passed 1.15 sec test 19 Start 19: test_render_validator_run 19: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/packages/render/validator/test/test_render_validator "/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/test" 19: Environment variables: 19: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/test 19: Test timeout computed to be: 3000 19: 19: Validator testrunner 19: ==================== 19: using test data from : /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/packages/render/validator/test/test-data 19: 19: Testing General XML Consistency Constraints (20000 - 29999). 19: 100%: Checks: 111, Failures: 0 19/69 Test #19: test_render_validator_run ..................... Passed 0.32 sec test 20 Start 20: test_sbml_annotation_run 20: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/annotation/test/test_sbml_annotation 20: Environment variables: 20: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/annotation/test 20: Test timeout computed to be: 3000 20: Running suite(s): CVTerms 20: CVTerms_newSetters 20: ModelHistory 20: Date_newSetters 20: ModelCreator_newSetters 20: ModelHistory_newSetters 20: CopyAndClone 20: RDFAnnotation 20: RDFAnnotation2 20: Validation 20: RDFAnnotation_C 20: L3ModelHistory 20: SyncAnnotation 20: RDFAnnotationMetaid 20: RDFAnnotationNestedCVTerm 20: RDFAnnotationV4 20: 100%: Checks: 182, Failures: 0, Errors: 0 20/69 Test #20: test_sbml_annotation_run ...................... Passed 0.66 sec test 21 Start 21: test_sbml_conversion_run 21: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/conversion/test/test_sbml_conversion 21: Environment variables: 21: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/conversion/test 21: Test timeout computed to be: 3000 21: Running suite(s): ConversionOption 21: SBMLRuleConverter 21: ConversionProperties 21: SBMLConverterRegistry 21: UnitsConverter 21: UnitsConverter2 21: UnitsConverterL2 21: InferUnitsConverter 21: StripPackageConverter 21: LevelVersionConverter 21: RateOfConverter 21: 100%: Checks: 173, Failures: 0, Errors: 0 21/69 Test #21: test_sbml_conversion_run ...................... Passed 0.86 sec test 22 Start 22: test_sbml_extension_run 22: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/extension/test/test_sbml_extension 22: Environment variables: 22: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/extension/test 22: Test timeout computed to be: 3000 22: Running suite(s): SBaseExtensionPoint 22: SBasePlugin 22: SBasePluginCreator 22: SBasePluginCreatorBase 22: SBMLDocumentPlugin 22: SBMLExtension 22: SBMLExtensionNamespaces 22: SBMLExtensionRegistry 22: TestUnknownPackages 22: 100%: Checks: 30, Failures: 0, Errors: 0 22/69 Test #22: test_sbml_extension_run ....................... Passed 0.18 sec test 23 Start 23: test_sbml_math_run 23: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/math/test/test_sbml_math 23: Environment variables: 23: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/math/test 23: Test timeout computed to be: 3000 23: Running suite(s): ASTNode 23: FormulaFormatter 23: FormulaParser 23: L3FormulaFormatter 23: L3FormulaParser 23: L3FormulaParserC 23: FormulaTokenizer 23: ReadMathML 23: WriteMathML 23: WriteMathMLFromAST 23: test-data/mathML_1.xml 23: test-data/mathML_2.xml 23: TestValidASTNode 23: TestChildFunctions 23: TestGetValue 23: test-data/L3V2Math.xml 23: 100%: Checks: 686, Failures: 0, Errors: 0 23/69 Test #23: test_sbml_math_run ............................ Passed 1.18 sec test 24 Start 24: test_sbml_sbml_run 24: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/test/test_sbml_sbml 24: Environment variables: 24: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/test 24: Test timeout computed to be: 3000 24: Running suite(s): ReadSBML 24: SBMLValidator API 24: RenameIDs 24: RemoveFromParent 24: GetMultipleObjects 24: WriteSBML 24: WriteL3SBML 24: WriteL3V2SBML 24: AlgebraicRule 24: AssignmentRule 24: Compartment 24: L3_Compartment 24: Compartment_newSetters 24: CompartmentType 24: CompartmentType_newSetters 24: CompartmentVolumeRule 24: Constraint 24: Constraint_newSetters 24: Delay 24: Event 24: L3_Event 24: Event_newSetters 24: EventAssignment 24: EventAssignment_newSetters 24: FunctionDefinition 24: FunctionDefinition_newSetters 24: InitialAssignment 24: InitialAssignment_newSetters 24: KineticLaw 24: KineticLaw_newSetters 24: L3_KineticLaw 24: ListOf 24: Model 24: L3_Model 24: Model_newSetters 24: ModifierSpeciesReference 24: Parameter 24: L3_Parameter 24: L3_LocalParameter 24: Parameter_newSetters 24: ParameterRule 24: Priority 24: RateRule 24: Reaction 24: L3_Reaction 24: Reaction_newSetters 24: Rule 24: Rule_newSetters 24: SBase 24: SBase_newSetters 24: Species 24: L3_Species 24: Species_newSetters 24: SpeciesReference 24: L3_SpeciesReference 24: SpeciesReference_newSetters 24: SpeciesConcentrationRule 24: SpeciesType 24: SpeciesType_newSetters 24: StoichiometryMath 24: Trigger 24: L3Trigger 24: Unit 24: L3_Unit 24: Unit_newSetters 24: UnitDefinition 24: UnitDefinition_newSetters 24: UnitKind 24: CopyAndClone 24: SBMLConvert 24: SBMLConvertStrict 24: SBMLConvertFromL3V2 24: SBMLDocument 24: SBMLError 24: test-data/l1v1-branch.xml 24: test-data/l1v1-units.xml 24: test-data/l1v1-rules.xml 24: test-data/l1v1-minimal.xml 24: test-data/l2v1-assignment.xml 24: test-data/l2v2-newComponents.xml 24: test-data/l2v3-all.xml 24: test-data/l2v4-new.xml 24: test-data/l3v1-new.xml 24: test-data/l2v5-all.xml 24: test-data/l3v2-all.xml 24: test-data/l3v2-no-model.xml 24: test-data/l3v2-empty-lo-1.xml 24: test-data/l3v2-empty-lo-2.xml 24: test-data/l3v2-empty-math.xml 24: test-data/l3v2-empty-event.xml 24: test-data/l3v2-empty-event2.xml 24: ConsistencyChecks 24: ParentObject 24: AncestorObject 24: InternalConsistencyChecks 24: HasReqdAtt 24: HasReqdElements 24: SBMLNamespaces 24: SyntaxChecker 24: SBMLConstructorException 24: SBMLTransforms 24: GetMultipleObjects 24: LevelCompatibility 24: SBaseIdName 24: Generic Attribute Functions 24: 100%: Checks: 1735, Failures: 0, Errors: 0 24/69 Test #24: test_sbml_sbml_run ............................ Passed 3.82 sec test 25 Start 25: test_sbml_units_run 25: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/units/test/test_sbml_units 25: Environment variables: 25: srcdir=/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/units/test 25: Test timeout computed to be: 3000 25: Running suite(s): UtilsUnit 25: UtilsUnitDefinition 25: UnitFormulaFormatter 25: UnitFormulaFormatter1 25: FormulaUnitData 25: FormulaUnitDataMap 25: DerivedUnitDefinition 25: UnitFormulaFormatter2 25: CalcUnitDefinition 25: UnitFormulaFormatter3 25: DerivedUnitDefinitionUndefined 25: 100%: Checks: 178, Failures: 0, Errors: 0 25/69 Test #25: test_sbml_units_run ........................... Passed 1.15 sec test 26 Start 26: test_sbml_util_run 26: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/util/test/test_sbml_util 26: Test timeout computed to be: 3000 26: Running suite(s): memory 26: util 26: List 26: Stack 26: StringBuffer 26: 100%: Checks: 57, Failures: 0, Errors: 0 26/69 Test #26: test_sbml_util_run ............................ Passed 0.04 sec test 27 Start 27: test_sbml_validator_run 27: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/validator/test/test_sbml_validator "/builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/test" 27: Test timeout computed to be: 3000 27: 27: Validator testrunner 27: ==================== 27: using test data from : /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/test/test-data 27: using conversion test data from: /builddir/build/BUILD/libSBML-5.19.0-Source/src/sbml/validator/test/test-data-conversion 27: 27: Testing Bad XML Constraints (0000 - 10000). 27: 100%: Checks: 55, Failures: 0 27: Testing General XML Consistency Constraints (10000 - 10199). 27: 100%: Checks: 197, Failures: 0 27: Testing General MathML Consistency Constraints (10200 - 10299). 27: 100%: Checks: 517, Failures: 0 27: Testing Id Consistency Constraints (10300 - 10399). 27: 100%: Checks: 509, Failures: 0 27: Testing General Annotation Consistency Constraints (10400 - 10499). 27: 100%: Checks: 65, Failures: 0 27: Testing Unit Consistency Constraints (10500 - 10599). 27: 100%: Checks: 1172, Failures: 0 27: Testing Unit Consistency Constraints (20000 - 29999). 27: 100%: Checks: 362, Failures: 0 27: Testing Overdetermined Constraints (10600 - 10699). 27: 100%: Checks: 31, Failures: 0 27: Testing SBO Consistency Constraints (10700 - 10799). 27: 100%: Checks: 206, Failures: 0 27: Testing General Notes Consistency Constraints (10800 - 19999). 27: 100%: Checks: 92, Failures: 0 27: Testing Model Consistency Constraints (20000 - 29999). 27: 100%: Checks: 2300, Failures: 0 27: Testing L1 Compatibility Constraints (91000 - 91999). 27: 100%: Checks: 91, Failures: 0 27: Testing L2v1 Compatibility Constraints (92000 - 92999). 27: 100%: Checks: 38, Failures: 0 27: Testing L2v2 Compatibility Constraints (93000 - 93999). 27: 100%: Checks: 23, Failures: 0 27: Testing L2v3 Compatibility Constraints (94000 - 94999). 27: 100%: Checks: 22, Failures: 0 27: Testing L2v4 Compatibility Constraints (95000 - 95999). 27: 100%: Checks: 21, Failures: 0 27: Testing L3v1 Compatibility Constraints (96000 - 96999). 27: 100%: Checks: 31, Failures: 0 27: Testing L1 for New Compatibility Constraints (98000 - 98999). 27: 100%: Checks: 39, Failures: 0 27: Testing L2v1 for New Compatibility Constraints (98000 - 98999). 27: 100%: Checks: 39, Failures: 0 27: Testing L2v2 for New Compatibility Constraints (98000 - 98999). 27: 100%: Checks: 39, Failures: 0 27: Testing L2v3 for New Compatibility Constraints (98000 - 98999). 27: 100%: Checks: 39, Failures: 0 27: Testing L3v1 for New Compatibility Constraints (98000 - 98999). 27: 100%: Checks: 39, Failures: 0 27: Testing New Compatibility Constraints (98000 - 98999). 27: 100%: Checks: 39, Failures: 0 27: Testing Additional SBML Constraints (99100 - 99108). 27: 100%: Checks: 31, Failures: 0 27: Testing Additional SBML Constraints (99129 - 99199). 27: 100%: Checks: 56, Failures: 0 27: Testing Additional Math Constraints (99200 - 99299). 27: 100%: Checks: 140, Failures: 0 27: Testing Additional SBML Constraints (99300 - 99399). 27: 100%: Checks: 16, Failures: 0 27: Testing Additional Annotation Constraints (99400 - 99499). 27: 100%: Checks: 28, Failures: 0 27: Testing Additional Unit Constraints (99127 - 99128). 27: 100%: Checks: 36, Failures: 0 27: Testing Additional Unit Constraints (99500 - 99599). 27: 100%: Checks: 175, Failures: 0 27: Testing Additional SBO Constraints (99700 - 99799). 27: 100%: Checks: 30, Failures: 0 27: Testing Modeling Practice Constraints (80000 - 89999). 27: 100%: Checks: 56, Failures: 0 27/69 Test #27: test_sbml_validator_run ....................... Passed 7.04 sec test 28 Start 28: test_sbml_xml_run 28: Test command: /builddir/build/BUILD/libSBML-5.19.0-Source/build/src/sbml/xml/test/test_sbml_xml 28: Test timeout computed to be: 3000 28: Running suite(s): XMLAttributes 28: CopyAndClone 28: XMLNamespaces 28: XMLTriple 28: XMLToken 28: XMLToken_newSetters 28: XMLNode 28: XMLNode_newSetters 28: XMLError 28: XMLErrorC 28: XMLErrorLog 28: XMLInputStream 28: XMLOutputStream 28: 28: XMLAttributesC 28: XMLExceptions 28: 100%: Checks: 129, Failures: 0, Errors: 0 28/69 Test #28: test_sbml_xml_run ............................. Passed 0.30 sec test 29 Start 29: test_perl_binding 29: Test command: /usr/bin/perl "-I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl" "-I/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl" "-MExtUtils::Command::MM" "-e" "test_harness(0)" "/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/*.t" 29: Environment variables: 29: LD_LIBRARY_PATH=/usr/lib/:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/perl/../..: 29: Test timeout computed to be: 3000 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/01__LoadModule.t ................ ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/02__CreateDocument.t ............ ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/02__ReadFromFile.t .............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/02__ReadFromFileL3.t ............ ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/02__WriteToFile.t ............... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/02__WriteToFileL3.t ............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/03__ChangeValues.t .............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/03__DowncastRule.t .............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/03__DowncastSBase.t ............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/03__DowncastSBaseL3.t ........... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/04__ListOf.t .................... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/04__ListOfL3.t .................. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__AlgebraicRule.t ............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__AssignmentRule.t ............ ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__AssignmentRuleL3.t .......... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__Compartment.t ............... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__CompartmentL3.t ............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__CompartmentVolumeRule.t ..... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__Event.t ..................... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__EventAssignment.t ........... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__EventL3.t ................... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__Formula.t ................... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__FunctionDefinition.t ........ ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__KineticLaw.t ................ ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__KineticLawL3.t .............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__Model.t ..................... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__ModelL3.t ................... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__ModifierSpeciesReference.t .. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__Parameter.t ................. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__ParameterL3.t ............... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__ParameterRule.t ............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__RateRule.t .................. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__SBMLDocument.t .............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/05__SBMLDocumentVerbose.t ....... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/06__TestReadSBML.t .............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/06__TestReadSBMLL3.t ............ ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/06__TestWriteSBML.t ............. ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/06__TestWriteSBMLL3.t ........... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/07__TestCVTerms.t ............... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/07__TestModelHistory.t .......... ok 29: /builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/perl/t/07__TestRDFAnnotation2.t ........ ok 29: All tests successful. 29: Files=41, Tests=3364, 13 wallclock secs ( 0.42 usr 0.09 sys + 11.37 cusr 1.36 csys = 13.24 CPU) 29: Result: PASS 29/69 Test #29: test_perl_binding ............................. Passed 13.21 sec test 30 Start 30: test_python_binding 30: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python/test.py" "-p" "/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python" "-b" "/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/test" 30: Test timeout computed to be: 3000 30: ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 30: ................................................................................................................................................................................................................................................................................................................................................................................................................ 30: ---------------------------------------------------------------------- 30: Ran 1819 tests in 0.627s 30: 30: OK 30/69 Test #30: test_python_binding ........................... Passed 2.18 sec test 31 Start 31: test_python_printversion 31: Test command: /usr/bin/python3 "-c" "import libsbml; assert libsbml.getLibSBMLDottedVersion() == '5.19.0'" "-p" "/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python" "-b" "/builddir/build/BUILD/libSBML-5.19.0-Source/src/bindings/python/test" 31: Environment variables: 31: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 31: Test timeout computed to be: 3000 31/69 Test #31: test_python_printversion ...................... Passed 0.24 sec test 32 Start 32: test_python_addCVTerms 32: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/addCVTerms.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "addCVTerms.out.xml" 32: Environment variables: 32: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 32: Test timeout computed to be: 3000 32/69 Test #32: test_python_addCVTerms ........................ Passed 0.24 sec test 33 Start 33: test_python_addingEvidenceCodes_1 33: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/addingEvidenceCodes_1.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "addingEvidenceCodes_1.out.xml" 33: Environment variables: 33: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 33: Test timeout computed to be: 3000 33/69 Test #33: test_python_addingEvidenceCodes_1 ............. Passed 0.24 sec test 34 Start 34: test_python_addingEvidenceCodes_2 34: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/addingEvidenceCodes_2.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "addingEvidenceCodes_2.out.xml" 34: Environment variables: 34: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 34: Test timeout computed to be: 3000 34/69 Test #34: test_python_addingEvidenceCodes_2 ............. Passed 0.24 sec test 35 Start 35: test_python_addModelHistory 35: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/addModelHistory.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "addModelHistory.out.xml" 35: Environment variables: 35: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 35: Test timeout computed to be: 3000 35: Status for addCreator: succeeded 35: Set created date: succeeded 35: Set modified date: succeeded 35: Set model history: unknown 35/69 Test #35: test_python_addModelHistory ................... Passed 0.24 sec test 36 Start 36: test_python_append_to_note 36: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/append_to_note.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekineticext.xml" "veq" "a new note" "append_to_note.out.xml" 36: Environment variables: 36: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 36: Test timeout computed to be: 3000 36: Body before change: 36: 36:

Some notes

36: 36: 36: Body after change: 36: 36:

Some notes

a new note 36/69 Test #36: test_python_append_to_note .................... Passed 0.24 sec test 37 Start 37: test_python_appendAnnotation 37: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/appendAnnotation.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "appendAnnotation.out.xml" 37: Environment variables: 37: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 37: Test timeout computed to be: 3000 37/69 Test #37: test_python_appendAnnotation .................. Passed 0.24 sec test 38 Start 38: test_python_convertSBML 38: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/convertSBML.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "convertSBML.out.xml" 38: Environment variables: 38: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 38: Test timeout computed to be: 3000 38: Attempting to convert Level 3 Version 1 model to Level 3 Version 2. 38: 38: Conversion completed. 38: 38/69 Test #38: test_python_convertSBML ....................... Passed 0.25 sec test 39 Start 39: test_python_createExampleSBML 39: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/createExampleSBML.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "createExampleSBMLy.out.xml" 39: Environment variables: 39: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 39: Test timeout computed to be: 3000 39: line 1: (99505 [Warning]) In situations where a mathematical expression contains literal numbers or parameters whose units have not been declared, it is not possible to verify accurately the consistency of the units in the expression. 39: The units of the expression 'f(S1) * compartmentOne / t' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate. 39: 39: Wrote file 'enzymaticreaction.xml' 39: Wrote file 'units.xml' 39: 39: Notice: encountered 1 validation warning in model 'functionExample'. 39: 39: Wrote file 'functiondef.xml' 39/69 Test #39: test_python_createExampleSBML ................. Passed 0.27 sec test 40 Start 40: test_python_createSimpleModel 40: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/createSimpleModel.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "createSimpleModel.out.xml" 40: Environment variables: 40: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 40: Test timeout computed to be: 3000 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: 40: k 40: s1 40: c1 40: 40: 40: 40: 40: 40: 40: 40: 40/69 Test #40: test_python_createSimpleModel ................. Passed 0.24 sec test 41 Start 41: test_python_echoSBML 41: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/echoSBML.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "echoSBML.out.xml" 41: Environment variables: 41: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 41: Test timeout computed to be: 3000 41: [OK] Echoed /builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml to echoSBML.out.xml 41/69 Test #41: test_python_echoSBML .......................... Passed 0.24 sec test 42 Start 42: test_python_evaluateCustomMath 42: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/evaluateCustomMath.py" "2*3+4" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" 42: Environment variables: 42: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 42: Test timeout computed to be: 3000 42: 2*3+4 = 10.0 42/69 Test #42: test_python_evaluateCustomMath ................ Passed 0.24 sec test 43 Start 43: test_python_getAllElementsWithNotes 43: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/getAllElementsWithNotes.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" 43: Environment variables: 43: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 43: Test timeout computed to be: 3000 43: 43: filename: /builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml 43: read time (ms): 1.8173828125 43: searching ......: 43: search time (ms): 0.128173828125 43: elements with notes: 0 43/69 Test #43: test_python_getAllElementsWithNotes ........... Passed 0.24 sec test 44 Start 44: test_python_inlineInitialAssignments 44: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/inlineInitialAssignments.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "inlineInitialAssignments.out.xml" 44: Environment variables: 44: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 44: Test timeout computed to be: 3000 44/69 Test #44: test_python_inlineInitialAssignments .......... Passed 0.24 sec test 45 Start 45: test_python_printAnnotation 45: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/printAnnotation.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" 45: Environment variables: 45: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 45: Test timeout computed to be: 3000 45: filename: /builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml 45: 45/69 Test #45: test_python_printAnnotation ................... Passed 0.24 sec test 46 Start 46: test_python_printMath 46: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/printMath.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" 46: Environment variables: 46: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 46: Test timeout computed to be: 3000 46: 46: Reaction 1, formula: comp * (kon * E * S - koff * ES) 46: 46: Reaction 2, formula: comp * kcat * ES 46: 46: 46: 46/69 Test #46: test_python_printMath ......................... Passed 0.24 sec test 47 Start 47: test_python_printRegisteredPackages 47: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/printRegisteredPackages.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "printRegisteredPackages.out.xml" 47: Environment variables: 47: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 47: Test timeout computed to be: 3000 47: This version of LibSBML: 5.19.0 includes: 47: 47: comp 47: fbc 47: groups 47: layout 47: render 47: l3v2extendedmath 47: multi 47: qual 47: 47: 47/69 Test #47: test_python_printRegisteredPackages ........... Passed 0.24 sec test 48 Start 48: test_python_printSBML 48: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/printSBML.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" 48: Environment variables: 48: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 48: Test timeout computed to be: 3000 48: 48: File: /builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml (Level 3, version 1) 48: id: (empty) 48: functionDefinitions: 0 48: unitDefinitions: 2 48: compartmentTypes: 0 48: specieTypes: 0 48: compartments: 1 48: species: 4 48: parameters: 0 48: initialAssignments: 0 48: rules: 0 48: constraints: 0 48: reactions: 2 48: events: 0 48: 48: 48/69 Test #48: test_python_printSBML ......................... Passed 0.24 sec test 49 Start 49: test_python_printsupported 49: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/printsupported.py" 49: Environment variables: 49: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 49: Test timeout computed to be: 3000 49: Supported by LibSBML 5.19.0 49: 49: SBML Level: 1 Version: 1 49: SBML Level: 1 Version: 2 49: SBML Level: 2 Version: 1 49: SBML Level: 2 Version: 2 49: SBML Level: 2 Version: 3 49: SBML Level: 2 Version: 4 49: SBML Level: 2 Version: 5 49: SBML Level: 3 Version: 1 49: SBML Level: 3 Version: 2 49: 49/69 Test #49: test_python_printsupported .................... Passed 0.24 sec test 50 Start 50: test_python_printUnits 50: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/printUnits.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" 50: Environment variables: 50: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 50: Test timeout computed to be: 3000 50: Species 0: mole (exponent = 1, multiplier = 1, scale = 0), litre (exponent = -1, multiplier = 1, scale = 0) 50: Species 1: mole (exponent = 1, multiplier = 1, scale = 0), litre (exponent = -1, multiplier = 1, scale = 0) 50: Species 2: mole (exponent = 1, multiplier = 1, scale = 0), litre (exponent = -1, multiplier = 1, scale = 0) 50: Species 3: mole (exponent = 1, multiplier = 1, scale = 0), litre (exponent = -1, multiplier = 1, scale = 0) 50: Compartment 0: litre (exponent = 1, multiplier = 1, scale = 0) 50: Reaction 0: 50: Kinetic Law: second (exponent = -1, multiplier = 1, scale = 0), mole (exponent = 1, multiplier = 1, scale = 0) 50: undeclared units: no 50: Reaction 1: 50: Kinetic Law: second (exponent = -1, multiplier = 1, scale = 0), mole (exponent = 1, multiplier = 1, scale = 0) 50: undeclared units: no 50/69 Test #50: test_python_printUnits ........................ Passed 0.25 sec test 51 Start 51: test_python_promoteParameters 51: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/promoteParameters.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "promoteParameters.out.xml" 51: Environment variables: 51: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 51: Test timeout computed to be: 3000 51: [OK] wrote promoteParameters.out.xml 51/69 Test #51: test_python_promoteParameters ................. Passed 0.24 sec test 52 Start 52: test_python_readSBML 52: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/readSBML.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" 52: Environment variables: 52: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 52: Test timeout computed to be: 3000 52: 52: filename: /builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml 52: file size: 3930 52: read time (ms): 0.0019144919999999899 52: validation error(s): 0 52: 52/69 Test #52: test_python_readSBML .......................... Passed 0.24 sec test 53 Start 53: test_python_replaceOneFD 53: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/replaceOneFD.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/functiondef.xml" "f" "reaction_1" "replaceOneFD.out.xml" 53: Environment variables: 53: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 53: Test timeout computed to be: 3000 53/69 Test #53: test_python_replaceOneFD ...................... Passed 0.24 sec test 54 Start 54: test_python_setIdFromNames 54: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/setIdFromNames.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "setIdFromNames.out.xml" 54: Environment variables: 54: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 54: Test timeout computed to be: 3000 54: 54: filename: /builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml 54: read time (ms): 1.83203125 54: rename time (ms): 0.161376953125 54: write time (ms): 0.816162109375 54: 54/69 Test #54: test_python_setIdFromNames .................... Passed 0.24 sec test 55 Start 55: test_python_unsetAnnotation 55: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/unsetAnnotation.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "unsetAnnotation.out.xml" 55: Environment variables: 55: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 55: Test timeout computed to be: 3000 55/69 Test #55: test_python_unsetAnnotation ................... Passed 0.24 sec test 56 Start 56: test_python_unsetNotes 56: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/unsetNotes.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" "unsetNotes.out.xml" 56: Environment variables: 56: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 56: Test timeout computed to be: 3000 56/69 Test #56: test_python_unsetNotes ........................ Passed 0.24 sec test 57 Start 57: test_python_validateSBML 57: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/validateSBML.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" 57: Environment variables: 57: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 57: Test timeout computed to be: 3000 57: --------------------------------------------------------------------------- 57: filename : /builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml 57: file size (byte) : 3930 57: read time (ms) : 1.861095 57: c-check time (ms) : 4.260302 57: validation error(s) : 0 57: (consistency error(s)): 0 57: validation warning(s) : 0 57: (consistency warning(s)): 0 57: --------------------------------------------------------------------------- 57: Validated 1 files, 1 valid files, 0 invalid files 57/69 Test #57: test_python_validateSBML ...................... Passed 0.25 sec test 58 Start 58: test_python_stringInput 58: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/stringInput.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml" 58: Environment variables: 58: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 58: Test timeout computed to be: 3000 58: filename: /builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/from-spec/level-3/enzymekinetics.xml 58: 58: 58: 58/69 Test #58: test_python_stringInput ....................... Passed 0.24 sec test 59 Start 59: test_python_stripPackage 59: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/stripPackage.py" "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/fbc/fbc_example1.xml" "fbc" "stripPackage.out.xml" 59: Environment variables: 59: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 59: Test timeout computed to be: 3000 59: [OK] stripped package 'fbc' from /builddir/build/BUILD/libSBML-5.19.0-Source/examples/sample-models/fbc/fbc_example1.xml to stripPackage.out.xml 59/69 Test #59: test_python_stripPackage ...................... Passed 0.24 sec test 60 Start 60: test_python_fbc_fbc_example1 60: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/fbc/fbc_example1.py" 60: Environment variables: 60: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 60: Test timeout computed to be: 3000 60/69 Test #60: test_python_fbc_fbc_example1 .................. Passed 0.25 sec test 61 Start 61: test_python_groups_groups_example1 61: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/groups/groups_example1.py" 61: Environment variables: 61: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 61: Test timeout computed to be: 3000 61/69 Test #61: test_python_groups_groups_example1 ............ Passed 0.24 sec test 62 Start 62: test_python_layout_example1_L3 62: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/layout/example1-L3.py" 62: Environment variables: 62: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 62: Test timeout computed to be: 3000 62/69 Test #62: test_python_layout_example1_L3 ................ Passed 0.25 sec test 63 Start 63: test_python_layout_example1 63: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/layout/example1.py" 63: Environment variables: 63: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 63: Test timeout computed to be: 3000 63/69 Test #63: test_python_layout_example1 ................... Passed 0.25 sec test 64 Start 64: test_python_multi_multi_example1 64: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/multi/multi_example1.py" 64: Environment variables: 64: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 64: Test timeout computed to be: 3000 64/69 Test #64: test_python_multi_multi_example1 .............. Passed 0.24 sec test 65 Start 65: test_python_multi_multi_example2 65: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/multi/multi_example2.py" 65: Environment variables: 65: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 65: Test timeout computed to be: 3000 65/69 Test #65: test_python_multi_multi_example2 .............. Passed 0.24 sec test 66 Start 66: test_python_multi_multi_example3 66: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/multi/multi_example3.py" 66: Environment variables: 66: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 66: Test timeout computed to be: 3000 66/69 Test #66: test_python_multi_multi_example3 .............. Passed 0.24 sec test 67 Start 67: test_python_multi_printMulti 67: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/multi/printMulti.py" 67: Environment variables: 67: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 67: Test timeout computed to be: 3000 67: usage: printMulti sbml-file 67/69 Test #67: test_python_multi_printMulti .................. Passed 0.24 sec test 68 Start 68: test_python_qual_qual_example1 68: Test command: /usr/bin/python3 "/builddir/build/BUILD/libSBML-5.19.0-Source/examples/python/qual/qual_example1.py" 68: Environment variables: 68: PYTHONPATH=/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python:/builddir/build/BUILD/libSBML-5.19.0-Source/build/src/bindings/python: 68: Test timeout computed to be: 3000 68/69 Test #68: test_python_qual_qual_example1 ................ Passed 0.24 sec test 69 Start 69: test_r_binding 69: Test command: /usr/bin/R "--slave" "-e" ".libPaths('temp');library(libSBML);cat(getLibSBMLDottedVersion() == '5.19.0')" 69: Test timeout computed to be: 3000 69: 69: Attaching package: 'libSBML' 69: 69: The following object is masked from 'package:base': 69: 69: flush 69: 69: TRUE 69/69 Test #69: test_r_binding ................................ Passed 8.76 sec The following tests passed: test_comp_extensions_run test_comp_sbase_run test_comp_util_run test_comp_validator_run test_sbml_package_fbc_run test_fbc_validator_run test_extension_package_groups_run test_groups_validator_run test_l3v2extendedmath_validator_run test_extension_package_l3v2extendedmath_run test_sbml_package_layout_run test_layout_validator_run test_sbml_package_multi_run test_multi_validator_run test_extension_package_qual_run test_sbml_package_qual_run test_qual_validator_run test_sbml_package_render_run test_render_validator_run test_sbml_annotation_run test_sbml_conversion_run test_sbml_extension_run test_sbml_math_run test_sbml_sbml_run test_sbml_units_run test_sbml_util_run test_sbml_validator_run test_sbml_xml_run test_perl_binding test_python_binding test_python_printversion test_python_addCVTerms test_python_addingEvidenceCodes_1 test_python_addingEvidenceCodes_2 test_python_addModelHistory test_python_append_to_note test_python_appendAnnotation test_python_convertSBML test_python_createExampleSBML test_python_createSimpleModel test_python_echoSBML test_python_evaluateCustomMath test_python_getAllElementsWithNotes test_python_inlineInitialAssignments test_python_printAnnotation test_python_printMath test_python_printRegisteredPackages test_python_printSBML test_python_printsupported test_python_printUnits test_python_promoteParameters test_python_readSBML test_python_replaceOneFD test_python_setIdFromNames test_python_unsetAnnotation test_python_unsetNotes test_python_validateSBML test_python_stringInput test_python_stripPackage test_python_fbc_fbc_example1 test_python_groups_groups_example1 test_python_layout_example1_L3 test_python_layout_example1 test_python_multi_multi_example1 test_python_multi_multi_example2 test_python_multi_multi_example3 test_python_multi_printMulti test_python_qual_qual_example1 test_r_binding 100% tests passed, 0 tests failed out of 69 Total Test time (real) = 60.42 sec + popd ~/build/BUILD/libSBML-5.19.0-Source + RPM_EC=0 ++ jobs -p + exit 0 Processing files: libsbml-5.19.0-9.fc36.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.fetPNb + umask 022 + cd /builddir/build/BUILD + cd libSBML-5.19.0-Source + DOCDIR=/builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/doc/libsbml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/doc/libsbml + cp -pr README-extension.txt README.md /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/doc/libsbml + cp -pr NEWS.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/doc/libsbml + cp -pr FUNDING.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/doc/libsbml + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.aTEnEA + umask 022 + cd /builddir/build/BUILD + cd libSBML-5.19.0-Source + LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + RPM_EC=0 ++ jobs -p + exit 0 Provides: libsbml = 5.19.0-9.fc36 libsbml(aarch-64) = 5.19.0-9.fc36 libsbml.so.5()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libminizip.so.3.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Obsoletes: libsbml-doc < 0:5.18.0-21 libsbml-sharp < 0:5.18.0-20 python2-libsbml < 5.18 Processing files: libsbml-devel-5.19.0-9.fc36.aarch64 Provides: libsbml-devel = 5.19.0-9.fc36 libsbml-devel(aarch-64) = 5.19.0-9.fc36 libsbml-static = 5.19.0-9.fc36 pkgconfig(libsbml) = 5.19.0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config libsbml.so.5()(64bit) pkgconfig(libxml-2.0) >= 2.6.22 Processing files: python3-libsbml-5.19.0-9.fc36.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.2uCbyR + umask 022 + cd /builddir/build/BUILD + cd libSBML-5.19.0-Source + LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-libsbml = 5.19.0-9.fc36 python3-libsbml = 5.19.0-9.fc36 python3-libsbml(aarch-64) = 5.19.0-9.fc36 python3.10-libsbml = 5.19.0-9.fc36 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libminizip.so.3.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) python(abi) = 3.10 rtld(GNU_HASH) Obsoletes: python-libsbml < 5.19.0-9.fc36 Processing files: perl-LibSBML-5.19.0-9.fc36.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.CBqL5M + umask 022 + cd /builddir/build/BUILD + cd libSBML-5.19.0-Source + LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + RPM_EC=0 ++ jobs -p + exit 0 Provides: perl(LibSBML) perl(LibSBML::ASTBasePlugin) perl(LibSBML::ASTNode) perl(LibSBML::ASTNodeList) perl(LibSBML::ASTNodeValues_t) perl(LibSBML::AlgebraicRule) perl(LibSBML::AssignmentRule) perl(LibSBML::Association) perl(LibSBML::BindingSiteSpeciesType) perl(LibSBML::BoundingBox) perl(LibSBML::CVTerm) perl(LibSBML::CVTermList) perl(LibSBML::Callback) perl(LibSBML::CallbackRegistry) perl(LibSBML::CobraToFbcConverter) perl(LibSBML::ColorDefinition) perl(LibSBML::CompBase) perl(LibSBML::CompExtension) perl(LibSBML::CompFlatteningConverter) perl(LibSBML::CompModelPlugin) perl(LibSBML::CompPkgNamespaces) perl(LibSBML::CompSBMLDocumentPlugin) perl(LibSBML::CompSBasePlugin) perl(LibSBML::Compartment) perl(LibSBML::CompartmentGlyph) perl(LibSBML::CompartmentReference) perl(LibSBML::CompartmentType) perl(LibSBML::Constraint) perl(LibSBML::ConversionOption) perl(LibSBML::ConversionProperties) perl(LibSBML::CubicBezier) perl(LibSBML::Curve) perl(LibSBML::Date) perl(LibSBML::DateList) perl(LibSBML::DefaultTerm) perl(LibSBML::DefaultValues) perl(LibSBML::DefinitionURLRegistry) perl(LibSBML::Delay) perl(LibSBML::Deletion) perl(LibSBML::Dimensions) perl(LibSBML::ElementFilter) perl(LibSBML::Ellipse) perl(LibSBML::Event) perl(LibSBML::EventAssignment) perl(LibSBML::ExternalModelDefinition) perl(LibSBML::FbcAnd) perl(LibSBML::FbcAssociation) perl(LibSBML::FbcExtension) perl(LibSBML::FbcModelPlugin) perl(LibSBML::FbcOr) perl(LibSBML::FbcPkgNamespaces) perl(LibSBML::FbcReactionPlugin) perl(LibSBML::FbcSBMLDocumentPlugin) perl(LibSBML::FbcSpeciesPlugin) perl(LibSBML::FbcToCobraConverter) perl(LibSBML::FbcV1ToV2Converter) perl(LibSBML::FbcV2ToV1Converter) perl(LibSBML::FluxBound) perl(LibSBML::FluxObjective) perl(LibSBML::FunctionDefinition) perl(LibSBML::FunctionTerm) perl(LibSBML::GeneAssociation) perl(LibSBML::GeneProduct) perl(LibSBML::GeneProductAssociation) perl(LibSBML::GeneProductRef) perl(LibSBML::GeneralGlyph) perl(LibSBML::GlobalRenderInformation) perl(LibSBML::GlobalStyle) perl(LibSBML::GradientBase) perl(LibSBML::GradientStop) perl(LibSBML::GraphicalObject) perl(LibSBML::GraphicalPrimitive1D) perl(LibSBML::GraphicalPrimitive2D) perl(LibSBML::Group) perl(LibSBML::GroupsExtension) perl(LibSBML::GroupsModelPlugin) perl(LibSBML::GroupsPkgNamespaces) perl(LibSBML::ISBMLExtensionNamespaces) perl(LibSBML::IdList) perl(LibSBML::IdentifierTransformer) perl(LibSBML::Image) perl(LibSBML::InSpeciesTypeBond) perl(LibSBML::InitialAssignment) perl(LibSBML::Input) perl(LibSBML::IntraSpeciesReaction) perl(LibSBML::KineticLaw) perl(LibSBML::L3ParserSettings) perl(LibSBML::L3v2extendedmathASTPlugin) perl(LibSBML::L3v2extendedmathExtension) perl(LibSBML::L3v2extendedmathPkgNamespaces) perl(LibSBML::L3v2extendedmathSBMLDocumentPlugin) perl(LibSBML::Layout) perl(LibSBML::LayoutExtension) perl(LibSBML::LayoutModelPlugin) perl(LibSBML::LayoutPkgNamespaces) perl(LibSBML::LayoutSpeciesReferencePlugin) perl(LibSBML::LineEnding) perl(LibSBML::LineSegment) perl(LibSBML::LinearGradient) perl(LibSBML::ListOf) perl(LibSBML::ListOfColorDefinitions) perl(LibSBML::ListOfCompartmentGlyphs) perl(LibSBML::ListOfCompartmentReferences) perl(LibSBML::ListOfCompartmentTypes) perl(LibSBML::ListOfCompartments) perl(LibSBML::ListOfConstraints) perl(LibSBML::ListOfCurveElements) perl(LibSBML::ListOfDeletions) perl(LibSBML::ListOfDrawables) perl(LibSBML::ListOfEventAssignments) perl(LibSBML::ListOfEvents) perl(LibSBML::ListOfExternalModelDefinitions) perl(LibSBML::ListOfFbcAssociations) perl(LibSBML::ListOfFluxBounds) perl(LibSBML::ListOfFluxObjectives) perl(LibSBML::ListOfFunctionDefinitions) perl(LibSBML::ListOfFunctionTerms) perl(LibSBML::ListOfGeneAssociations) perl(LibSBML::ListOfGeneProducts) perl(LibSBML::ListOfGlobalRenderInformation) perl(LibSBML::ListOfGlobalStyles) perl(LibSBML::ListOfGradientDefinitions) perl(LibSBML::ListOfGradientStops) perl(LibSBML::ListOfGraphicalObjects) perl(LibSBML::ListOfGroups) perl(LibSBML::ListOfInSpeciesTypeBonds) perl(LibSBML::ListOfInitialAssignments) perl(LibSBML::ListOfInputs) perl(LibSBML::ListOfLayouts) perl(LibSBML::ListOfLineEndings) perl(LibSBML::ListOfLineSegments) perl(LibSBML::ListOfLocalParameters) perl(LibSBML::ListOfLocalRenderInformation) perl(LibSBML::ListOfLocalStyles) perl(LibSBML::ListOfMembers) perl(LibSBML::ListOfModelDefinitions) perl(LibSBML::ListOfMultiSpeciesTypes) perl(LibSBML::ListOfObjectives) perl(LibSBML::ListOfOutputs) perl(LibSBML::ListOfOutwardBindingSites) perl(LibSBML::ListOfParameters) perl(LibSBML::ListOfPorts) perl(LibSBML::ListOfPossibleSpeciesFeatureValues) perl(LibSBML::ListOfQualitativeSpecies) perl(LibSBML::ListOfReactionGlyphs) perl(LibSBML::ListOfReactions) perl(LibSBML::ListOfReferenceGlyphs) perl(LibSBML::ListOfReplacedElements) perl(LibSBML::ListOfRules) perl(LibSBML::ListOfSpecies) perl(LibSBML::ListOfSpeciesFeatureTypes) perl(LibSBML::ListOfSpeciesFeatureValues) perl(LibSBML::ListOfSpeciesFeatures) perl(LibSBML::ListOfSpeciesGlyphs) perl(LibSBML::ListOfSpeciesReferenceGlyphs) perl(LibSBML::ListOfSpeciesReferences) perl(LibSBML::ListOfSpeciesTypeComponentIndexes) perl(LibSBML::ListOfSpeciesTypeComponentMapInProducts) perl(LibSBML::ListOfSpeciesTypeInstances) perl(LibSBML::ListOfSpeciesTypes) perl(LibSBML::ListOfSubmodels) perl(LibSBML::ListOfTextGlyphs) perl(LibSBML::ListOfTransitions) perl(LibSBML::ListOfUnitDefinitions) perl(LibSBML::ListOfUnits) perl(LibSBML::LocalParameter) perl(LibSBML::LocalRenderInformation) perl(LibSBML::LocalStyle) perl(LibSBML::MathFilter) perl(LibSBML::Member) perl(LibSBML::Model) perl(LibSBML::ModelCreator) perl(LibSBML::ModelCreatorList) perl(LibSBML::ModelDefinition) perl(LibSBML::ModelHistory) perl(LibSBML::ModifierSpeciesReference) perl(LibSBML::MultiASTPlugin) perl(LibSBML::MultiCompartmentPlugin) perl(LibSBML::MultiExtension) perl(LibSBML::MultiListOfReactionsPlugin) perl(LibSBML::MultiModelPlugin) perl(LibSBML::MultiPkgNamespaces) perl(LibSBML::MultiSBMLDocumentPlugin) perl(LibSBML::MultiSimpleSpeciesReferencePlugin) perl(LibSBML::MultiSpeciesPlugin) perl(LibSBML::MultiSpeciesReferencePlugin) perl(LibSBML::MultiSpeciesType) perl(LibSBML::OFStream) perl(LibSBML::OStream) perl(LibSBML::OStringStream) perl(LibSBML::Objective) perl(LibSBML::Output) perl(LibSBML::OutwardBindingSite) perl(LibSBML::Parameter) perl(LibSBML::Point) perl(LibSBML::Polygon) perl(LibSBML::Port) perl(LibSBML::PossibleSpeciesFeatureValue) perl(LibSBML::Priority) perl(LibSBML::QualExtension) perl(LibSBML::QualModelPlugin) perl(LibSBML::QualPkgNamespaces) perl(LibSBML::QualitativeSpecies) perl(LibSBML::RDFAnnotationParser) perl(LibSBML::RadialGradient) perl(LibSBML::RateRule) perl(LibSBML::Reaction) perl(LibSBML::ReactionGlyph) perl(LibSBML::Rectangle) perl(LibSBML::ReferenceGlyph) perl(LibSBML::RelAbsVector) perl(LibSBML::RenderCubicBezier) perl(LibSBML::RenderCurve) perl(LibSBML::RenderExtension) perl(LibSBML::RenderGraphicalObjectPlugin) perl(LibSBML::RenderGroup) perl(LibSBML::RenderInformationBase) perl(LibSBML::RenderLayoutPlugin) perl(LibSBML::RenderListOfLayoutsPlugin) perl(LibSBML::RenderPkgNamespaces) perl(LibSBML::RenderPoint) perl(LibSBML::ReplacedBy) perl(LibSBML::ReplacedElement) perl(LibSBML::Replacing) perl(LibSBML::Rule) perl(LibSBML::SBMLConstructorException) perl(LibSBML::SBMLConverter) perl(LibSBML::SBMLConverterRegistry) perl(LibSBML::SBMLDocument) perl(LibSBML::SBMLDocumentPlugin) perl(LibSBML::SBMLError) perl(LibSBML::SBMLErrorLog) perl(LibSBML::SBMLExtension) perl(LibSBML::SBMLExtensionException) perl(LibSBML::SBMLExtensionRegistry) perl(LibSBML::SBMLExternalValidator) perl(LibSBML::SBMLFileResolver) perl(LibSBML::SBMLFunctionDefinitionConverter) perl(LibSBML::SBMLIdConverter) perl(LibSBML::SBMLInferUnitsConverter) perl(LibSBML::SBMLInitialAssignmentConverter) perl(LibSBML::SBMLLevel1Version1Converter) perl(LibSBML::SBMLLevelVersionConverter) perl(LibSBML::SBMLLocalParameterConverter) perl(LibSBML::SBMLNamespaces) perl(LibSBML::SBMLNamespacesList) perl(LibSBML::SBMLReactionConverter) perl(LibSBML::SBMLReader) perl(LibSBML::SBMLResolver) perl(LibSBML::SBMLResolverRegistry) perl(LibSBML::SBMLRuleConverter) perl(LibSBML::SBMLStripPackageConverter) perl(LibSBML::SBMLTransforms) perl(LibSBML::SBMLUnitsConverter) perl(LibSBML::SBMLUri) perl(LibSBML::SBMLValidator) perl(LibSBML::SBMLWriter) perl(LibSBML::SBO) perl(LibSBML::SBase) perl(LibSBML::SBaseExtensionPoint) perl(LibSBML::SBaseList) perl(LibSBML::SBasePlugin) perl(LibSBML::SBaseRef) perl(LibSBML::SimpleSpeciesReference) perl(LibSBML::Species) perl(LibSBML::SpeciesFeature) perl(LibSBML::SpeciesFeatureType) perl(LibSBML::SpeciesFeatureValue) perl(LibSBML::SpeciesGlyph) perl(LibSBML::SpeciesReference) perl(LibSBML::SpeciesReferenceGlyph) perl(LibSBML::SpeciesType) perl(LibSBML::SpeciesTypeComponentIndex) perl(LibSBML::SpeciesTypeComponentMapInProduct) perl(LibSBML::SpeciesTypeInstance) perl(LibSBML::StoichiometryMath) perl(LibSBML::StringSet) perl(LibSBML::Style) perl(LibSBML::SubListOfSpeciesFeatures) perl(LibSBML::Submodel) perl(LibSBML::SyntaxChecker) perl(LibSBML::Text) perl(LibSBML::TextGlyph) perl(LibSBML::Transformation) perl(LibSBML::Transformation2D) perl(LibSBML::Transition) perl(LibSBML::Trigger) perl(LibSBML::Unit) perl(LibSBML::UnitDefinition) perl(LibSBML::XMLAttributes) perl(LibSBML::XMLConstructorException) perl(LibSBML::XMLError) perl(LibSBML::XMLErrorLog) perl(LibSBML::XMLInputStream) perl(LibSBML::XMLNamespaces) perl(LibSBML::XMLNode) perl(LibSBML::XMLOutputStream) perl(LibSBML::XMLOwningOutputFileStream) perl(LibSBML::XMLOwningOutputStringStream) perl(LibSBML::XMLToken) perl(LibSBML::XMLTriple) perl(LibSBML::double_array) perl(LibSBML::int_array) perl(LibSBMLc) perl-LibSBML = 5.19.0-9.fc36 perl-LibSBML(aarch-64) = 5.19.0-9.fc36 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libminizip.so.3.0()(64bit) libperl.so.5.34()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) perl(DynaLoader) perl(Exporter) perl(base) perl(overload) perl(vars) rtld(GNU_HASH) Processing files: ruby-SBML-5.19.0-9.fc36.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.AcpB1E + umask 022 + cd /builddir/build/BUILD + cd libSBML-5.19.0-Source + LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + RPM_EC=0 ++ jobs -p + exit 0 Provides: libSBML.so()(64bit) ruby(SBML) = 5.19.0 ruby-SBML = 5.19.0-9.fc36 ruby-SBML(aarch-64) = 5.19.0-9.fc36 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libminizip.so.3.0()(64bit) libruby.so.3.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: R-libSBML-5.19.0-9.fc36.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.oLFMRN + umask 022 + cd /builddir/build/BUILD + cd libSBML-5.19.0-Source + LICENSEDIR=/builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + cp -pr COPYING.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64/usr/share/licenses/libsbml + RPM_EC=0 ++ jobs -p + exit 0 Provides: R(libSBML) = 5.19.0 R-libSBML = 5.19.0-9.fc36 R-libSBML(aarch-64) = 5.19.0-9.fc36 libSBML.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(ABI) = 4.1 R(methods) R-core >= 1.8.0 ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libR.so()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libminizip.so.3.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.1)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: libsbml-debugsource-5.19.0-9.fc36.aarch64 Provides: libsbml-debugsource = 5.19.0-9.fc36 libsbml-debugsource(aarch-64) = 5.19.0-9.fc36 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libsbml-debuginfo-5.19.0-9.fc36.aarch64 Provides: debuginfo(build-id) = 33d24795bbee7b928542f076d3f1a9bea4cb2a14 libsbml-debuginfo = 5.19.0-9.fc36 libsbml-debuginfo(aarch-64) = 5.19.0-9.fc36 libsbml.so.5.19.0-5.19.0-9.fc36.aarch64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsbml-debugsource(aarch-64) = 5.19.0-9.fc36 Processing files: python3-libsbml-debuginfo-5.19.0-9.fc36.aarch64 Provides: debuginfo(build-id) = 6fdbae3a47e61b7a02c8ba425f10e3b6bca544ce python-libsbml-debuginfo = 5.19.0-9.fc36 python3-libsbml-debuginfo = 5.19.0-9.fc36 python3-libsbml-debuginfo(aarch-64) = 5.19.0-9.fc36 python3.10-libsbml-debuginfo = 5.19.0-9.fc36 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsbml-debugsource(aarch-64) = 5.19.0-9.fc36 Processing files: perl-LibSBML-debuginfo-5.19.0-9.fc36.aarch64 Provides: debuginfo(build-id) = 395cbdf0ad9ab7e6cdfbfdbec451257b9a9cd5aa perl-LibSBML-debuginfo = 5.19.0-9.fc36 perl-LibSBML-debuginfo(aarch-64) = 5.19.0-9.fc36 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsbml-debugsource(aarch-64) = 5.19.0-9.fc36 Processing files: ruby-SBML-debuginfo-5.19.0-9.fc36.aarch64 Provides: debuginfo(build-id) = f6fbd3ce9c66a32ae86b7a4403a879ae109bade3 libSBML.so-5.19.0-9.fc36.aarch64.debug()(64bit) ruby-SBML-debuginfo = 5.19.0-9.fc36 ruby-SBML-debuginfo(aarch-64) = 5.19.0-9.fc36 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsbml-debugsource(aarch-64) = 5.19.0-9.fc36 Processing files: R-libSBML-debuginfo-5.19.0-9.fc36.aarch64 Provides: R-libSBML-debuginfo = 5.19.0-9.fc36 R-libSBML-debuginfo(aarch-64) = 5.19.0-9.fc36 debuginfo(build-id) = 9fd6379a5df2daa443b6c415c26a51233668f1a9 libSBML.so-5.19.0-9.fc36.aarch64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsbml-debugsource(aarch-64) = 5.19.0-9.fc36 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64 Wrote: /builddir/build/RPMS/R-libSBML-debuginfo-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/python3-libsbml-debuginfo-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/ruby-SBML-debuginfo-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/perl-LibSBML-debuginfo-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/python3-libsbml-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/libsbml-devel-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/R-libSBML-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/libsbml-debuginfo-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/perl-LibSBML-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/libsbml-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/libsbml-debugsource-5.19.0-9.fc36.aarch64.rpm Wrote: /builddir/build/RPMS/ruby-SBML-5.19.0-9.fc36.aarch64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.wap75L + umask 022 + cd /builddir/build/BUILD + cd libSBML-5.19.0-Source + /usr/bin/rm -rf /builddir/build/BUILDROOT/libsbml-5.19.0-9.fc36.aarch64 + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild libsbml-5.19.0-9.fc36.src.rpm Finish: build phase for libsbml-5.19.0-9.fc36.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1641986745.557547/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-aarch64-1641986745.557547/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-aarch64-1641986745.557547/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/libsbml-5.19.0-9.fc36.src.rpm) Config(child) 123 minutes 9 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool