Mock Version: 3.0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/libghemical.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1657262392.088524/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fb83c9c0670>timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6nzw9qvx:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6nzw9qvx:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '45fe4604499f4464b6ed32e28393b73b', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1657262392.088524/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6nzw9qvx:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/libghemical.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
warning: line 23: Possible unexpanded macro in: Requires:       libint(api)(x86-64) = %{_libint_apiversion}
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1642636800
Wrote: /builddir/build/SRPMS/libghemical-3.0.0-18.fc37.src.rpm
RPM build warnings:
    line 23: Possible unexpanded macro in: Requires:       libint(api)(x86-64) = %{_libint_apiversion}
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/libghemical.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1657262392.088524/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fb83c9c0670>timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6nzw9qvx:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6nzw9qvx:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '99272b52917c49248e533ed20325c78b', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1657262392.088524/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.6nzw9qvx:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/libghemical.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1642636800
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.mNmp1n
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf libghemical-3.0.0
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/libghemical-3.0.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd libghemical-3.0.0
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.dEiHVj
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/libghemical-3.0.0/.package_note-libghemical-3.0.0-18.fc37.x86_64.ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' -f /usr/lib/rpm/generate-rpm-note.sh ']'
+ /usr/lib/rpm/generate-rpm-note.sh libghemical 3.0.0-18.fc37 x86_64
+ cd libghemical-3.0.0
+ sed -i s/blas/flexiblas/g configure.ac
+ sed -i s/lapack/flexiblas/g configure.ac
+ autoreconf -ivf
autoreconf: export WARNINGS=
autoreconf: Entering directory '.'
autoreconf: configure.ac: not using Gettext
autoreconf: running: aclocal --force 
autoreconf: configure.ac: tracing
autoreconf: running: libtoolize --copy --force
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac,
libtoolize: and rerunning libtoolize and aclocal.
libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am.
autoreconf: running: intltoolize --copy --force
autoreconf: configure.ac: not using Gtkdoc
autoreconf: running: aclocal --force 
autoreconf: running: /usr/bin/autoconf --force
configure.ac:26: warning: 'AM_CONFIG_HEADER': this macro is obsolete.
configure.ac:26: You should use the 'AC_CONFIG_HEADERS' macro instead.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:10863: AM_CONFIG_HEADER is expanded from...
configure.ac:26: the top level
configure.ac:32: warning: 'AM_CONFIG_HEADER': this macro is obsolete.
configure.ac:32: You should use the 'AC_CONFIG_HEADERS' macro instead.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:10863: AM_CONFIG_HEADER is expanded from...
configure.ac:32: the top level
configure.ac:91: warning: The macro `AC_PROG_LIBTOOL' is obsolete.
configure.ac:91: You should run autoupdate.
aclocal.m4:799: AC_PROG_LIBTOOL is expanded from...
configure.ac:91: the top level
configure.ac:105: warning: The macro `GLIB_GNU_GETTEXT' is obsolete.
configure.ac:105: You should run autoupdate.
aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from...
aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from...
configure.ac:105: the top level
configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:105: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from...
aclocal.m4:73: GLIB_LC_MESSAGES is expanded from...
aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from...
aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from...
configure.ac:105: the top level
configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:105: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from...
./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from...
aclocal.m4:172: GLIB_WITH_NLS is expanded from...
aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from...
aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from...
configure.ac:105: the top level
configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:105: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from...
./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from...
aclocal.m4:172: GLIB_WITH_NLS is expanded from...
aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from...
aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from...
configure.ac:105: the top level
configure.ac:105: warning: The macro `AC_OUTPUT_COMMANDS' is obsolete.
configure.ac:105: You should run autoupdate.
./lib/autoconf/status.m4:1025: AC_OUTPUT_COMMANDS is expanded from...
aclocal.m4:172: GLIB_WITH_NLS is expanded from...
aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from...
aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from...
configure.ac:105: the top level
configure.ac:126: warning: The macro `AC_TRY_RUN' is obsolete.
configure.ac:126: You should run autoupdate.
./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from...
acinclude.m4:10: AM_PATH_SC is expanded from...
configure.ac:126: the top level
configure.ac:126: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:126: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
acinclude.m4:10: AM_PATH_SC is expanded from...
configure.ac:126: the top level
configure.ac:159: warning: The macro `AC_PROG_CC_STDC' is obsolete.
configure.ac:159: You should run autoupdate.
./lib/autoconf/c.m4:1666: AC_PROG_CC_STDC is expanded from...
configure.ac:159: the top level
configure.ac:171: warning: The macro `AC_HEADER_STDC' is obsolete.
configure.ac:171: You should run autoupdate.
./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from...
configure.ac:171: the top level
autoreconf: running: /usr/bin/autoheader --force
autoreconf: running: automake --add-missing --copy --force-missing
configure.ac:86: installing './compile'
configure.ac:42: installing './missing'
/usr/share/automake-1.16/am/ltlibrary.am: warning: 'libghemical.la': linking libtool libraries using a non-POSIX
/usr/share/automake-1.16/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac'
src/Makefile.am:1:   while processing Libtool library 'libghemical.la'
src/Makefile.am: installing './depcomp'
autoreconf: Leaving directory '.'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/libghemical-3.0.0/.package_note-libghemical-3.0.0-18.fc37.x86_64.ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']'
++ find . -type f -name configure -print
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure
+ diff -u ./configure.backup ./configure
--- ./configure.backup	2022-07-08 06:41:08.454054389 +0000
+++ ./configure	2022-07-08 06:41:09.414062674 +0000
@@ -1913,7 +1913,7 @@
 #ifdef __cplusplus
 extern "C"
 #endif
-char $2 ();
+__attribute__ ((used)) char $2 ();
 /* The GNU C library defines this for functions which it implements
     to always fail with ENOSYS.  Some functions are actually named
     something starting with __ and the normal name is an alias.  */
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure
+ diff -u ./configure.backup ./configure
--- ./configure.backup	2022-07-08 06:41:09.414062674 +0000
+++ ./configure	2022-07-08 06:41:09.433062837 +0000
@@ -8064,7 +8064,7 @@
 # Transform an extracted symbol line into a proper C declaration.
 # Some systems (esp. on ia64) link data and code symbols differently,
 # so use this general approach.
-lt_cv_sys_global_symbol_to_cdecl="$SED -n"\
+lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"
 $lt_cdecl_hook\
 " -e 's/^T .* \(.*\)$/extern int \1();/p'"\
 " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'"
@@ -20531,7 +20531,7 @@
 compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`'
 GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`'
 lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`'
-lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`'
+lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"
 lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`'
 lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`'
 lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`'
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./config.sub
++ basename ./config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub
'/usr/lib/rpm/redhat/config.sub' -> './config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./config.guess
++ basename ./config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess
'/usr/lib/rpm/redhat/config.guess' -> './config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./ltmain.sh
+ ./configure --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --enable-mopac7 --enable-mpqc --disable-static --disable-sctest
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking build system type... x86_64-redhat-linux-gnu
checking host system type... x86_64-redhat-linux-gnu
checking for x86_64-redhat-linux-gnu-gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking whether the compiler supports GNU C++... yes
checking whether g++ accepts -g... yes
checking for g++ option to enable C++11 features... none needed
checking dependency style of g++... none
checking how to run the C preprocessor... gcc -E
checking how to run the C++ preprocessor... g++ -E
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for x86_64-redhat-linux-gnu-file... no
checking for file... file
checking for x86_64-redhat-linux-gnu-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-redhat-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-redhat-linux-gnu-ar... no
checking for ar... ar
checking for archiver @FILE support... @
checking for x86_64-redhat-linux-gnu-strip... no
checking for strip... strip
checking for x86_64-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ./configure: line 8070:  -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p': No such file or directory
ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for x86_64-redhat-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for ar... /usr/bin/ar
checking for sh... /bin/sh
checking whether make sets $(MAKE)... (cached) yes
checking for x86_64-redhat-linux-gnu-pkg-config... /usr/bin/x86_64-redhat-linux-gnu-pkg-config
checking pkg-config is at least version 0.9.0... yes
checking whether NLS is requested... yes
checking for intltool >= 0.40.0... 0.51.0 found
checking for intltool-update... /usr/bin/intltool-update
checking for intltool-merge... /usr/bin/intltool-merge
checking for intltool-extract... /usr/bin/intltool-extract
checking for xgettext... /usr/bin/xgettext
checking for msgmerge... /usr/bin/msgmerge
checking for msgfmt... /usr/bin/msgfmt
checking for gmsgfmt... /usr/bin/msgfmt
checking for perl... /usr/bin/perl
checking for perl >= 5.8.1... 5.36.0
checking for XML::Parser... ok
checking for locale.h... yes
checking for LC_MESSAGES... yes
checking for CFPreferencesCopyAppValue... no
checking for CFLocaleCopyCurrent... no
checking for libintl.h... yes
checking for ngettext in libc... yes
checking for dgettext in libc... yes
checking for bind_textdomain_codeset... yes
checking for msgfmt... (cached) /usr/bin/msgfmt
checking for dcgettext... yes
checking if msgfmt accepts -c... yes
checking for gmsgfmt... (cached) /usr/bin/msgfmt
checking for xgettext... (cached) /usr/bin/xgettext
checking whether build environment is sane... yes
checking for acos in -lm... yes
checking for main in -lflexiblas... yes
checking for main in -lflexiblas... (cached) yes
checking for sc-config... /usr/bin/sc-config
checking SC - version... yes
checking for MOPAC7... yes
checking for GL/gl.h... yes
checking for inline... inline
checking for an ANSI C-conforming const... yes
checking for egrep... (cached) /usr/bin/grep -E
configure:
build options:
^^^^^^^^^^^^^^
enable MPQC : yes
enable MOPAC7 : yes
checking that generated files are newer than configure... done
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating libghemical.pc
config.status: creating Makefile
config.status: creating bin/Makefile
config.status: creating bin/amber/Makefile
config.status: creating bin/builder/Makefile
config.status: creating bin/param_mm/Makefile
config.status: creating bin/param_mm/default/Makefile
config.status: creating bin/param_mm/prmfit/Makefile
config.status: creating bin/param_mm/tripos52/Makefile
config.status: creating bin/param_sf/Makefile
config.status: creating bin/param_sf/default/Makefile
config.status: creating po/Makefile.in
config.status: creating src/Makefile
config.status: creating src/libghemicalconfig.h
config.status: creating src/libghemical-features.h
config.status: executing src/libghemicalconfig2.h commands
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing default-1 commands
config.status: executing stamp.h commands
config.status: executing po/stamp-it commands
+ /usr/bin/make -O -j2 V=1 VERBOSE=1
Making all in src
/usr/bin/make  all-am
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o atom.lo atom.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c atom.cpp  -fPIC -DPIC -o .libs/atom.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
atom.cpp:33:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
   33 | element element::current_element = element("C");
      |                                            ^~~
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o bond.lo bond.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c bond.cpp  -fPIC -DPIC -o .libs/bond.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o constraint.lo constraint.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c constraint.cpp  -fPIC -DPIC -o .libs/constraint.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o engine.lo engine.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c engine.cpp  -fPIC -DPIC -o .libs/engine.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o typerule.lo typerule.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c typerule.cpp  -fPIC -DPIC -o .libs/typerule.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
typerule.cpp: In member function 'i32s typerule::ReadSubRule(std::istream*, std::ostream*)':
typerule.cpp:172:56: warning: narrowing conversion of 'strlen(((const char*)((char*)(&((typerule*)this)->typerule::buffer))))' from 'size_t' {aka 'long unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  172 |                                 i32s tmp1[2] = { strlen(buffer), 0 };
      |                                                  ~~~~~~^~~~~~~~
typerule.cpp:193:49: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
  193 |                                                 else tmp2[1] = buffer[tmp1[0]++]; element el = element(tmp2);
      |                                                 ^~~~
typerule.cpp:193:83: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
  193 |                                                 else tmp2[1] = buffer[tmp1[0]++]; element el = element(tmp2);
      |                                                                                   ^~~~~~~
typerule.cpp: In member function 'bool typerule::CheckRules(model*, atom*, i32s, i32s)':
typerule.cpp:302:45: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare]
  302 |                 if (atom->GetConnRecCount() != (i32u) sr_vector[rule].data) return false;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o utility.lo utility.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c utility.cpp  -fPIC -DPIC -o .libs/utility.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
utility.cpp: In function 'void DefineSecondaryStructure(model*)':
utility.cpp:308:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  308 |                         i32s tmp1[2] = { n1, n2 };
      |                                          ^~
utility.cpp:309:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  309 |                         i32s tmp2[2] = { n1, n2 + 4 };
      |                                          ^~
utility.cpp:349:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  349 |                                 i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 };
      |                                                 ^~
utility.cpp:349:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  349 |                                 i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 };
      |                                                                               ^~
utility.cpp:352:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  352 |                                 i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 };
      |                                                 ^~
utility.cpp:352:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  352 |                                 i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 };
      |                                                                           ^~
utility.cpp:355:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  355 |                                 i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 };
      |                                                 ^~
utility.cpp:355:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  355 |                                 i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 };
      |                                                                               ^~
utility.cpp:358:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  358 |                                 i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 };
      |                                                 ^~
utility.cpp:358:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  358 |                                 i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 };
      |                                                                           ^~
utility.cpp:361:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  361 |                                 i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 };
      |                                                 ^~
utility.cpp:361:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  361 |                                 i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 };
      |                                                                           ^~
utility.cpp:364:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  364 |                                 i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 };
      |                                                 ^~
utility.cpp:364:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  364 |                                 i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 };
      |                                                                           ^~
utility.cpp:367:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  367 |                                 i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 };
      |                                                 ^~
utility.cpp:367:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  367 |                                 i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 };
      |                                                                               ^~
utility.cpp:370:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  370 |                                 i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 };
      |                                                 ^~
utility.cpp:370:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing]
  370 |                                 i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 };
      |                                                                               ^~
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o chn_info.lo chn_info.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c chn_info.cpp  -fPIC -DPIC -o .libs/chn_info.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o model.lo model.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c model.cpp  -fPIC -DPIC -o .libs/model.o
In file included from local_i18n.h:38,
                 from model.cpp:46:
libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined
   99 | #define PACKAGE_NAME "libghemical"
      | 
In file included from /usr/include/mpqc/util/misc/exenv.h:37,
                 from /usr/include/mpqc/util/class/class.h:46,
                 from /usr/include/mpqc/util/keyval/keyval.h:42,
                 from eng1_qm_mpqc.h:37,
                 from eng2_qm_mm.h:38,
                 from model.cpp:35:
/usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition
  278 | #define PACKAGE_NAME ""
      | 
libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined
  102 | #define PACKAGE_STRING "libghemical 3.0.0"
      | 
/usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition
  281 | #define PACKAGE_STRING ""
      | 
libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined
  105 | #define PACKAGE_TARNAME "libghemical"
      | 
/usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition
  284 | #define PACKAGE_TARNAME ""
      | 
libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined
  111 | #define PACKAGE_VERSION "3.0.0"
      | 
/usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition
  290 | #define PACKAGE_VERSION ""
      | 
In file included from model.cpp:31:
eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type]
  128 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type]
  129 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type]
   90 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type]
   91 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type]
  127 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type]
  128 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
model.cpp: In member function 'bool model::FindRing(atom*, atom*, signed char*, i32s, i32s, i32s)':
model.cpp:961:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  961 |         if (dist == size) return false; iter_cl it1;
      |         ^~
model.cpp:961:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  961 |         if (dist == size) return false; iter_cl it1;
      |                                         ^~~~~~~
model.cpp: In member function 'void model::AddHydrogens()':
model.cpp:1755:45: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses]
 1755 |                 if (some_atoms_selected && (!(* it1).flags & ATOMFLAG_USER_SELECTED))
      |                                             ^~~~~~~~~~~~~~
model.cpp: In member function 'void model::SolvateBox(fGL, fGL, fGL, fGL, model*, const char*)':
model.cpp:2248:52: warning: variable 'r1' set but not used [-Wunused-but-set-variable]
 2248 |                         const default_at * at; f64 r1 = 0.150; f64 e1 = 0.175;
      |                                                    ^~
model.cpp:2248:68: warning: variable 'e1' set but not used [-Wunused-but-set-variable]
 2248 |                         const default_at * at; f64 r1 = 0.150; f64 e1 = 0.175;
      |                                                                    ^~
model.cpp: In member function 'void model::DoGeomOpt(geomopt_param&, bool)':
model.cpp:2663:21: warning: unused variable 'eng_bp' [-Wunused-variable]
 2663 |         engine_bp * eng_bp = dynamic_cast<engine_bp *>(eng);
      |                     ^~~~~~
model.cpp: In member function 'bool model::GetCRDSetVisible(i32u)':
model.cpp:319:30: warning: control reaches end of non-void function [-Wreturn-type]
  319 |         else assertion_failed(__FILE__, __LINE__, "index overflow");
      |              ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o mfinder.lo mfinder.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mfinder.cpp  -fPIC -DPIC -o .libs/mfinder.o
mfinder.cpp: In member function 'void mfinder::Identify(model*)':
mfinder.cpp:164:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  164 |                                         if (!flag) continue; head_atoms.push_back(& (* it1)); break;
      |                                         ^~
mfinder.cpp:164:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  164 |                                         if (!flag) continue; head_atoms.push_back(& (* it1)); break;
      |                                                              ^~~~~~~~~~
mfinder.cpp:173:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  173 |                                         if (!flag) continue; tail_atoms.push_back(& (* it1)); break;
      |                                         ^~
mfinder.cpp:173:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  173 |                                         if (!flag) continue; tail_atoms.push_back(& (* it1)); break;
      |                                                              ^~~~~~~~~~
mfinder.cpp:221:37: warning: unused variable 'head_el' [-Wunused-variable]
  221 |                                 int head_el = NOT_DEFINED;
      |                                     ^~~~~~~
mfinder.cpp:222:37: warning: unused variable 'tail_el' [-Wunused-variable]
  222 |                                 int tail_el = NOT_DEFINED;
      |                                     ^~~~~~~
mfinder.cpp: In function 'std::ostream& operator<<(std::ostream&, mf_data_atm&)':
mfinder.cpp:703:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  703 |         if (p2.tr != NULL) p1 << " " << (* p2.tr); p1 << " ";
      |         ^~
mfinder.cpp:703:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  703 |         if (p2.tr != NULL) p1 << " " << (* p2.tr); p1 << " ";
      |                                                    ^~
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o seqbuild.lo seqbuild.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c seqbuild.cpp  -fPIC -DPIC -o .libs/seqbuild.o
seqbuild.cpp: In member function 'void sequencebuilder::Build(model*, sb_chain_descriptor*, bool)':
seqbuild.cpp:307:29: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'const int' [-Wsign-compare]
  307 |         for (i32u n1 = 0;n1 < num_res;n1++)
      |                          ~~~^~~~~~~~~
seqbuild.cpp:310:37: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  310 |                 bool last_res = (n1 == (num_res - 1));
      |                                  ~~~^~~~~~~~~~~~~~~~
seqbuild.cpp:317:74: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare]
  317 |                         if (chde->c_crd_BGN < 0 && chde->c_crd_v[n2].pos == n1) chde->c_crd_BGN = n2;
seqbuild.cpp:318:98: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare]
  318 |                         if (chde->c_crd_BGN >= 0 && chde->c_crd_END < 0 && chde->c_crd_v[n2].pos > n1) chde->c_crd_END = n2;
seqbuild.cpp:324:74: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare]
  324 |                         if (chde->c_tor_BGN < 0 && chde->c_tor_v[n2].pos == n1) chde->c_tor_BGN = n2;
seqbuild.cpp:325:98: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare]
  325 |                         if (chde->c_tor_BGN >= 0 && chde->c_tor_END < 0 && chde->c_tor_v[n2].pos > n1) chde->c_tor_END = n2;
seqbuild.cpp: In member function 'void sequencebuilder::Identify(model*)':
seqbuild.cpp:541:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  541 |                                         if (!flag) continue; head_atoms.push_back(& (* it1)); break;
      |                                         ^~
seqbuild.cpp:541:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  541 |                                         if (!flag) continue; head_atoms.push_back(& (* it1)); break;
      |                                                              ^~~~~~~~~~
seqbuild.cpp:550:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  550 |                                         if (!flag) continue; tail_atoms.push_back(& (* it1)); break;
      |                                         ^~
seqbuild.cpp:550:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  550 |                                         if (!flag) continue; tail_atoms.push_back(& (* it1)); break;
      |                                                              ^~~~~~~~~~
seqbuild.cpp: In member function 'void sequencebuilder::Convert(sb_chain_descriptor*, sb_data_atm*, fGL*)':
seqbuild.cpp:1124:27: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector<sb_data_td>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1124 |                 if (tor_i >= td_v.size())
      |                     ~~~~~~^~~~~~~~~~~~~~
seqbuild.cpp:1298:35: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1298 |                         if (tor_i >= chde->def_tor.size())
      |                             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
seqbuild.cpp:1328:40: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1328 |                         else if (tor_i < chde->def_tor.size())
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
seqbuild.cpp: In function 'std::istream& operator>>(std::istream&, sb_data_td&)':
seqbuild.cpp:1577:14: warning: unused variable 'buffer' [-Wunused-variable]
 1577 |         char buffer[256];
      |              ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng1_qm.lo eng1_qm.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng1_qm.cpp  -fPIC -DPIC -o .libs/eng1_qm.o
In file included from local_i18n.h:38,
                 from eng1_qm.cpp:27:
libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined
   99 | #define PACKAGE_NAME "libghemical"
      | 
In file included from /usr/include/mpqc/util/misc/exenv.h:37,
                 from /usr/include/mpqc/util/class/class.h:46,
                 from /usr/include/mpqc/util/keyval/keyval.h:42,
                 from eng1_qm_mpqc.h:37,
                 from eng1_qm.cpp:24:
/usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition
  278 | #define PACKAGE_NAME ""
      | 
libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined
  102 | #define PACKAGE_STRING "libghemical 3.0.0"
      | 
/usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition
  281 | #define PACKAGE_STRING ""
      | 
libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined
  105 | #define PACKAGE_TARNAME "libghemical"
      | 
/usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition
  284 | #define PACKAGE_TARNAME ""
      | 
libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined
  111 | #define PACKAGE_VERSION "3.0.0"
      | 
/usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition
  290 | #define PACKAGE_VERSION ""
      | 
In file included from eng1_qm.cpp:22:
eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type]
  128 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type]
  129 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng1_qm_mopac.lo eng1_qm_mopac.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng1_qm_mopac.cpp  -fPIC -DPIC -o .libs/eng1_qm_mopac.o
In file included from eng1_qm_mopac.h:30,
                 from eng1_qm_mopac.cpp:22:
eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type]
  128 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type]
  129 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
eng1_qm_mopac.cpp: In destructor 'eng1_qm_mopac::~eng1_qm_mopac()':
eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  153 |         system(cs_FOR005.str().c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  157 |         system(cs_SHUTDOWN.str().c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
eng1_qm_mopac.cpp: In destructor 'virtual eng1_qm_mopac::~eng1_qm_mopac()':
eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  153 |         system(cs_FOR005.str().c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  157 |         system(cs_SHUTDOWN.str().c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
eng1_qm_mopac.cpp: In member function 'void eng1_qm_mopac::FixMeLaterTSS()':
eng1_qm_mopac.cpp:178:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  178 |         system(cs_FOR005.str().c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
eng1_qm_mopac.cpp:181:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  181 |         system(cs_SHUTDOWN.str().c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng1_qm_mpqc.lo eng1_qm_mpqc.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng1_qm_mpqc.cpp  -fPIC -DPIC -o .libs/eng1_qm_mpqc.o
In file included from local_i18n.h:38,
                 from eng1_qm_mpqc.cpp:24:
libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined
   99 | #define PACKAGE_NAME "libghemical"
      | 
In file included from /usr/include/mpqc/util/misc/exenv.h:37,
                 from /usr/include/mpqc/util/class/class.h:46,
                 from /usr/include/mpqc/util/keyval/keyval.h:42,
                 from eng1_qm_mpqc.h:37,
                 from eng1_qm_mpqc.cpp:22:
/usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition
  278 | #define PACKAGE_NAME ""
      | 
libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined
  102 | #define PACKAGE_STRING "libghemical 3.0.0"
      | 
/usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition
  281 | #define PACKAGE_STRING ""
      | 
libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined
  105 | #define PACKAGE_TARNAME "libghemical"
      | 
/usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition
  284 | #define PACKAGE_TARNAME ""
      | 
libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined
  111 | #define PACKAGE_VERSION "3.0.0"
      | 
/usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition
  290 | #define PACKAGE_VERSION ""
      | 
In file included from /usr/include/mpqc/util/group/linkage.h:32,
                 from /usr/include/mpqc/math/scmat/linkage.h:34,
                 from /usr/include/mpqc/chemistry/qc/scf/linkage.h:37,
                 from eng1_qm_mpqc.cpp:44:
/usr/include/mpqc/scconfig.h:278: warning: "PACKAGE_NAME" redefined
  278 | #define PACKAGE_NAME ""
      | 
libghemicalconfig.h:99: note: this is the location of the previous definition
   99 | #define PACKAGE_NAME "libghemical"
      | 
/usr/include/mpqc/scconfig.h:281: warning: "PACKAGE_STRING" redefined
  281 | #define PACKAGE_STRING ""
      | 
libghemicalconfig.h:102: note: this is the location of the previous definition
  102 | #define PACKAGE_STRING "libghemical 3.0.0"
      | 
/usr/include/mpqc/scconfig.h:284: warning: "PACKAGE_TARNAME" redefined
  284 | #define PACKAGE_TARNAME ""
      | 
libghemicalconfig.h:105: note: this is the location of the previous definition
  105 | #define PACKAGE_TARNAME "libghemical"
      | 
/usr/include/mpqc/scconfig.h:290: warning: "PACKAGE_VERSION" redefined
  290 | #define PACKAGE_VERSION ""
      | 
libghemicalconfig.h:111: note: this is the location of the previous definition
  111 | #define PACKAGE_VERSION "3.0.0"
      | 
In file included from eng1_qm_mpqc.h:32:
eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type]
  128 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type]
  129 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
eng1_qm_mpqc.cpp: In constructor 'eng1_qm_mpqc::eng1_qm_mpqc(setup*, i32u, i32u)':
eng1_qm_mpqc.cpp:50:92: warning: base 'eng1_qm' will be initialized after [-Wreorder]
   50 | eng1_qm_mpqc::eng1_qm_mpqc(setup * p1, i32u p2, i32u mode) : eng1_qm(p1, p2), engine(p1, p2)
      |                                                                                            ^
eng1_qm_mpqc.cpp:50:92: warning:   base 'engine' [-Wreorder]
eng1_qm_mpqc.cpp:50:1: warning:   when initialized here [-Wreorder]
   50 | eng1_qm_mpqc::eng1_qm_mpqc(setup * p1, i32u p2, i32u mode) : eng1_qm(p1, p2), engine(p1, p2)
      | ^~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng1_mm.lo eng1_mm.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng1_mm.cpp  -fPIC -DPIC -o .libs/eng1_mm.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o tab_mm_tripos52.lo tab_mm_tripos52.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c tab_mm_tripos52.cpp  -fPIC -DPIC -o .libs/tab_mm_tripos52.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng1_mm_tripos52.lo eng1_mm_tripos52.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng1_mm_tripos52.cpp  -fPIC -DPIC -o .libs/eng1_mm_tripos52.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng1_mm_default.lo eng1_mm_default.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng1_mm_default.cpp  -fPIC -DPIC -o .libs/eng1_mm_default.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o tab_mm_default.lo tab_mm_default.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c tab_mm_default.cpp  -fPIC -DPIC -o .libs/tab_mm_default.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
tab_mm_default.cpp:691:17: warning: multi-line comment [-Wcomment]
  691 |                 //  / \
      |                 ^
tab_mm_default.cpp: In member function 'bool default_tables::e_Init(eng1_mm*, mm_default_bt3*, i32s*)':
tab_mm_default.cpp:3178:17: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
 3178 |                 if (z < 1) z = 1; z -= 1;
      |                 ^~
tab_mm_default.cpp:3178:35: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
 3178 |                 if (z < 1) z = 1; z -= 1;
      |                                   ^
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o tab_mm_prmfit.lo tab_mm_prmfit.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c tab_mm_prmfit.cpp  -fPIC -DPIC -o .libs/tab_mm_prmfit.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
tab_mm_prmfit.cpp:597:17: warning: multi-line comment [-Wcomment]
  597 |                 //  / \
      |                 ^
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng1_mm_prmfit.lo eng1_mm_prmfit.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng1_mm_prmfit.cpp  -fPIC -DPIC -o .libs/eng1_mm_prmfit.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
eng1_mm_prmfit.cpp: In constructor 'eng1_mm_prmfit::eng1_mm_prmfit(setup*, i32u, prmfit_tables&)':
eng1_mm_prmfit.cpp:329:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  329 |         if (query.index == NOT_DEFINED) bt3_err++;
      |         ^~
eng1_mm_prmfit.cpp:331:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  331 |                                         newbt3.fc1 = query.fc1;
      |                                         ^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng1_sf_ua.lo eng1_sf_ua.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng1_sf_ua.cpp  -fPIC -DPIC -o .libs/eng1_sf_ua.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng1_sf_cg.lo eng1_sf_cg.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng1_sf_cg.cpp  -fPIC -DPIC -o .libs/eng1_sf_cg.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng2_qm_mm.lo eng2_qm_mm.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng2_qm_mm.cpp  -fPIC -DPIC -o .libs/eng2_qm_mm.o
In file included from local_i18n.h:38,
                 from eng2_qm_mm.cpp:24:
libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined
   99 | #define PACKAGE_NAME "libghemical"
      | 
In file included from /usr/include/mpqc/util/misc/exenv.h:37,
                 from /usr/include/mpqc/util/class/class.h:46,
                 from /usr/include/mpqc/util/keyval/keyval.h:42,
                 from eng1_qm_mpqc.h:37,
                 from eng2_qm_mm.h:38,
                 from eng2_qm_mm.cpp:22:
/usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition
  278 | #define PACKAGE_NAME ""
      | 
libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined
  102 | #define PACKAGE_STRING "libghemical 3.0.0"
      | 
/usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition
  281 | #define PACKAGE_STRING ""
      | 
libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined
  105 | #define PACKAGE_TARNAME "libghemical"
      | 
/usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition
  284 | #define PACKAGE_TARNAME ""
      | 
libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined
  111 | #define PACKAGE_VERSION "3.0.0"
      | 
/usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition
  290 | #define PACKAGE_VERSION ""
      | 
In file included from eng2_qm_mm.h:28:
eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type]
  128 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type]
  129 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type]
   90 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type]
   91 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type]
  127 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type]
  128 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o notice.lo notice.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c notice.cpp  -fPIC -DPIC -o .libs/notice.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o conjgrad.lo conjgrad.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c conjgrad.cpp  -fPIC -DPIC -o .libs/conjgrad.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o intcrd.lo intcrd.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c intcrd.cpp  -fPIC -DPIC -o .libs/intcrd.o
intcrd.cpp: In constructor 'intcrd::intcrd(model&, i32s, i32s)':
intcrd.cpp:82:47: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare]
   82 |                 if ((* it1).GetConnRecCount() < nbonds)
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o search.lo search.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c search.cpp  -fPIC -DPIC -o .libs/search.o
In file included from search.h:35,
                 from search.cpp:22:
eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type]
  128 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type]
  129 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
search.cpp: In constructor 'transition_state_search::transition_state_search(model*, f64, f64)':
search.cpp:513:29: warning: comparison of integer expressions of different signedness: 'i32s' {aka 'int'} and 'i32u' {aka 'unsigned int'} [-Wsign-compare]
  513 |         for (i32s n1 = 0;n1 < mdl->GetCRDSetCount();n1++)
      |                          ~~~^~~~~~~~~~~~~~~~~~~~~~~
search.cpp:795:39: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'int' [-Wsign-compare]
  795 |                 if (engQM->l2g_qm[ii] != ii) problems = true;
      |                     ~~~~~~~~~~~~~~~~~~^~~~~
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o geomopt.lo geomopt.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c geomopt.cpp  -fPIC -DPIC -o .libs/geomopt.o
In file included from geomopt.h:31,
                 from geomopt.cpp:22:
eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type]
  128 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type]
  129 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o moldyn.lo moldyn.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c moldyn.cpp  -fPIC -DPIC -o .libs/moldyn.o
moldyn.cpp: In member function 'virtual void moldyn::TakeMDStep(bool, bool)':
moldyn.cpp:149:13: warning: variable 'current_temperature' set but not used [-Wunused-but-set-variable]
  149 |         f64 current_temperature = ConvEKinTemp(ekin);
      |             ^~~~~~~~~~~~~~~~~~~
moldyn.cpp:242:55: warning: 'volume' may be used uninitialized [-Wmaybe-uninitialized]
  242 |                 saved_density = 0.001 * sum_of_masses / volume;         // kg/dm^3
      |                                 ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
moldyn.cpp:188:21: note: 'volume' was declared here
  188 |                 f64 volume;
      |                     ^~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o eng1_sf.lo eng1_sf.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c eng1_sf.cpp  -fPIC -DPIC -o .libs/eng1_sf.o
eng1_sf.cpp: In member function 'void setup1_sf::StorePStatesToModel(eng1_sf*)':
eng1_sf.cpp:965:33: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  965 |                                 if (tmpc < -0.5) charge -= 1; if (tmpc > +0.5) charge += 1;
      |                                 ^~
eng1_sf.cpp:965:63: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  965 |                                 if (tmpc < -0.5) charge -= 1; if (tmpc > +0.5) charge += 1;
      |                                                               ^~
eng1_sf.cpp: In constructor 'eng1_sf::eng1_sf(setup*, i32u, bool, bool)':
eng1_sf.cpp:1444:6: warning: variable 'h4flag_0' set but not used [-Wunused-but-set-variable]
 1444 | bool h4flag_0 = false; if ((indr1 - 0) >= 0 && mysu->chn_vector[indc1].res_vector[indr1 - 0].state == SF_STATE_HELIX4) h4flag_0 = true;
      |      ^~~~~~~~
eng1_sf.cpp:1447:6: warning: variable 'h4flag_3' set but not used [-Wunused-but-set-variable]
 1447 | bool h4flag_3 = false; if ((indr1 - 3) >= 0 && mysu->chn_vector[indc1].res_vector[indr1 - 3].state == SF_STATE_HELIX4) h4flag_3 = true;
      |      ^~~~~~~~
eng1_sf.cpp: In member function 'eng1_sf::ComputeBT3(unsigned int)':
eng1_sf.cpp:3471:72: warning: 'sn[1]' may be used uninitialized [-Wmaybe-uninitialized]
 3471 |                                 loop2 -= fsc[0] * sn[0] + 2.0 * fsc[1] * sn[1] + 3.0 * fsc[2] * sn[2];
      |                                                           ~~~~~~~~~~~~~^~~~~~~
eng1_sf.cpp:3350:32: note: 'sn[1]' was declared here
 3350 |                 f64 cs[3]; f64 sn[3];
      |                                ^~
eng1_sf.cpp:3471:95: warning: 'sn[2]' may be used uninitialized [-Wmaybe-uninitialized]
 3471 |                                 loop2 -= fsc[0] * sn[0] + 2.0 * fsc[1] * sn[1] + 3.0 * fsc[2] * sn[2];
      |                                                                                  ~~~~~~~~~~~~~^~~~~~~
eng1_sf.cpp:3350:32: note: 'sn[2]' was declared here
 3350 |                 f64 cs[3]; f64 sn[3];
      |                                ^~
eng1_sf.cpp:3463:41: warning: 'cs[0]' may be used uninitialized [-Wmaybe-uninitialized]
 3463 |                         loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2];
      |                                  ~~~~~~~^~~~~~~
eng1_sf.cpp:3350:21: note: 'cs[0]' was declared here
 3350 |                 f64 cs[3]; f64 sn[3];
      |                     ^~
eng1_sf.cpp:3463:58: warning: 'cs[1]' may be used uninitialized [-Wmaybe-uninitialized]
 3463 |                         loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2];
      |                                                   ~~~~~~~^~~~~~~
eng1_sf.cpp:3350:21: note: 'cs[1]' was declared here
 3350 |                 f64 cs[3]; f64 sn[3];
      |                     ^~
eng1_sf.cpp:3463:75: warning: 'cs[2]' may be used uninitialized [-Wmaybe-uninitialized]
 3463 |                         loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2];
      |                                                                    ~~~~~~~^~~~~~~
eng1_sf.cpp:3350:21: note: 'cs[2]' was declared here
 3350 |                 f64 cs[3]; f64 sn[3];
      |                     ^~
eng1_sf.cpp:3471:49: warning: 'sn[0]' may be used uninitialized [-Wmaybe-uninitialized]
 3471 |                                 loop2 -= fsc[0] * sn[0] + 2.0 * fsc[1] * sn[1] + 3.0 * fsc[2] * sn[2];
      |                                          ~~~~~~~^~~~~~~
eng1_sf.cpp:3350:32: note: 'sn[0]' was declared here
 3350 |                 f64 cs[3]; f64 sn[3];
      |                                ^~
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o pop_ana.lo pop_ana.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c pop_ana.cpp  -fPIC -DPIC -o .libs/pop_ana.o
In file included from pop_ana.h:31,
                 from pop_ana.cpp:22:
eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)':
eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type]
  128 |         virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                                           ^
eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)':
eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type]
  129 |         virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); }
      |                                                                                                                                              ^
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o resonance.lo resonance.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c resonance.cpp  -fPIC -DPIC -o .libs/resonance.o
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o sasaeval.lo sasaeval.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sasaeval.cpp  -fPIC -DPIC -o .libs/sasaeval.o
sasaeval.cpp: In constructor 'sasaeval::sasaeval(engine*)':
sasaeval.cpp:59:27: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'i32s' {aka 'int'} [-Wsign-compare]
   59 |         for (i32u i = 0;i < natm_GLOB;i++)
      |                         ~~^~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
/bin/sh ../libtool  --tag=CXX   --mode=link g++  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -version-info 5:1:0 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/libghemical-3.0.0/.package_note-libghemical-3.0.0-18.fc37.x86_64.ld -o libghemical.la -rpath /usr/lib64 atom.lo bond.lo constraint.lo model.lo engine.lo typerule.lo utility.lo chn_info.lo seqbuild.lo mfinder.lo eng1_qm.lo eng1_qm_mpqc.lo eng1_qm_mopac.lo eng1_mm.lo eng1_mm_tripos52.lo tab_mm_tripos52.lo eng1_mm_default.lo tab_mm_default.lo eng1_mm_prmfit.lo tab_mm_prmfit.lo eng1_sf.lo eng1_sf_ua.lo eng1_sf_cg.lo eng2_qm_mm.lo notice.lo conjgrad.lo intcrd.lo search.lo geomopt.lo moldyn.lo pop_ana.lo sasaeval.lo resonance.lo  -lflexiblas -lflexiblas -lm  -L/usr/lib64 -lSCoptions -lSCpsi -lSCmbptr12 -lSCmbpt -lSCwfn -lSCsolvent -lSCdft -lSCscf -lSCcints -lSCintv3 -lSCoint3 -lSCbasis -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCgroup -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -lderiv -lr12 -lint -lm -ldl -lflexiblas -L/lib/../lib64 -L/usr/lib/../lib64 -lflexiblas -lgfortran -lm -lquadmath -L/lib/../lib64 -L/usr/lib/../lib64 -lflexiblas -lgfortran -lm -lquadmath -L/usr/lib -lmopac7 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/12/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/12/crtbeginS.o  .libs/atom.o .libs/bond.o .libs/constraint.o .libs/model.o .libs/engine.o .libs/typerule.o .libs/utility.o .libs/chn_info.o .libs/seqbuild.o .libs/mfinder.o .libs/eng1_qm.o .libs/eng1_qm_mpqc.o .libs/eng1_qm_mopac.o .libs/eng1_mm.o .libs/eng1_mm_tripos52.o .libs/tab_mm_tripos52.o .libs/eng1_mm_default.o .libs/tab_mm_default.o .libs/eng1_mm_prmfit.o .libs/tab_mm_prmfit.o .libs/eng1_sf.o .libs/eng1_sf_ua.o .libs/eng1_sf_cg.o .libs/eng2_qm_mm.o .libs/notice.o .libs/conjgrad.o .libs/intcrd.o .libs/search.o .libs/geomopt.o .libs/moldyn.o .libs/pop_ana.o .libs/sasaeval.o .libs/resonance.o   -lm -L/usr/lib64 -lSCoptions -lSCpsi -lSCmbptr12 -lSCmbpt -lSCwfn -lSCsolvent -lSCdft -lSCscf -lSCcints -lSCintv3 -lSCoint3 -lSCbasis -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCgroup -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -lderiv -lr12 -lint -lm -ldl -L/lib/../lib64 -L/usr/lib/../lib64 -lm -lflexiblas -lgfortran -lm -lquadmath -L/usr/lib -lmopac7 -L/usr/lib/gcc/x86_64-redhat-linux/12 -L/usr/lib/gcc/x86_64-redhat-linux/12/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/12/../../.. -lstdc++ -lm -lgcc_s -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/12/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/12/../../../../lib64/crtn.o -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -flto=auto -g -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT -Wl,/builddir/build/BUILD/libghemical-3.0.0/.package_note-libghemical-3.0.0-18.fc37.x86_64.ld   -Wl,-soname -Wl,libghemical.so.5 -o .libs/libghemical.so.5.0.1
libtool: link: (cd ".libs" && rm -f "libghemical.so.5" && ln -s "libghemical.so.5.0.1" "libghemical.so.5")
libtool: link: (cd ".libs" && rm -f "libghemical.so" && ln -s "libghemical.so.5.0.1" "libghemical.so")
libtool: link: ( cd ".libs" && rm -f "libghemical.la" && ln -s "../libghemical.la" "libghemical.la" )
typerule.cpp: In member function 'ReadSubRule':
typerule.cpp:183:50: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=]
  183 |                                 newring[tmp1[1]] = 0;
      |                                                  ^
typerule.cpp:182:84: note: at offset -1 into destination object of size 0 allocated by 'operator new []'
  182 |                                 signed char * newring = new signed char[tmp1[1] + 1];
      |                                                                                    ^
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
Making all in bin
Making all in amber
make[2]: Nothing to be done for 'all'.
Making all in builder
make[2]: Nothing to be done for 'all'.
Making all in param_mm
Making all in default
make[3]: Nothing to be done for 'all'.
Making all in prmfit
make[3]: Nothing to be done for 'all'.
Making all in tripos52
make[3]: Nothing to be done for 'all'.
make[3]: Nothing to be done for 'all-am'.
Making all in param_sf
Making all in default
make[3]: Nothing to be done for 'all'.
make[3]: Nothing to be done for 'all-am'.
make[2]: Nothing to be done for 'all-am'.
Making all in po
make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po'
file=`echo de | sed 's,.*/,,'`.gmo \
  && rm -f $file && /usr/bin/msgfmt -o $file de.po
make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po'
make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po'
file=`echo fi | sed 's,.*/,,'`.gmo \
  && rm -f $file && /usr/bin/msgfmt -o $file fi.po
make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po'
make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po'
file=`echo pt_BR | sed 's,.*/,,'`.gmo \
  && rm -f $file && /usr/bin/msgfmt -o $file pt_BR.po
make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po'
make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po'
file=`echo mk | sed 's,.*/,,'`.gmo \
  && rm -f $file && /usr/bin/msgfmt -o $file mk.po
make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po'
make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po'
file=`echo ru | sed 's,.*/,,'`.gmo \
  && rm -f $file && /usr/bin/msgfmt -o $file ru.po
make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po'
make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po'
file=`echo sq | sed 's,.*/,,'`.gmo \
  && rm -f $file && /usr/bin/msgfmt -o $file sq.po
make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po'
make[1]: Nothing to be done for 'all-am'.
+ sed -ir -e 's/^Libs:.*/Libs: -L${libdir} -lghemical/g' libghemical.pc
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.0UYQ7I
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64
++ dirname /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64  -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/libghemical-3.0.0/.package_note-libghemical-3.0.0-18.fc37.x86_64.ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd libghemical-3.0.0
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64 'INSTALL=/usr/bin/install -p'
Making install in src
make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/lib64'
 /bin/sh ../libtool   --mode=install /usr/bin/install -p   libghemical.la '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/lib64'
libtool: install: /usr/bin/install -p .libs/libghemical.so.5.0.1 /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/lib64/libghemical.so.5.0.1
libtool: install: (cd /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/lib64 && { ln -s -f libghemical.so.5.0.1 libghemical.so.5 || { rm -f libghemical.so.5 && ln -s libghemical.so.5.0.1 libghemical.so.5; }; })
libtool: install: (cd /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/lib64 && { ln -s -f libghemical.so.5.0.1 libghemical.so || { rm -f libghemical.so && ln -s libghemical.so.5.0.1 libghemical.so; }; })
libtool: install: /usr/bin/install -p .libs/libghemical.lai /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/lib64/libghemical.la
libtool: warning: remember to run 'libtool --finish /usr/lib64'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/include/ghemical'
 /usr/bin/install -p -m 644 libghemicaldefine.h libghemical-features.h local_i18n.h typedef.h v3d.h atom.h bond.h constraint.h model.h engine.h typerule.h utility.h chn_info.h seqbuild.h mfinder.h eng1_qm.h eng1_qm_mpqc.h eng1_qm_mopac.h eng1_mm.h eng1_mm_tripos52.h tab_mm_tripos52.h eng1_mm_default.h tab_mm_default.h eng1_mm_prmfit.h tab_mm_prmfit.h eng1_sf.h eng1_sf_ua.h eng1_sf_cg.h eng2_qm_mm.h notice.h conjgrad.h intcrd.h search.h geomopt.h moldyn.h pop_ana.h sasaeval.h resonance.h '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/include/ghemical'
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src'
Making install in bin
make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin'
Making install in amber
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/amber'
make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/amber'
make[3]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/amber'
 /usr/bin/install -p -m 644 all_amino94_MOD.in all_aminoct94.in all_aminont94.in all_nuc94_MOD.in parm99_frcmod_ff99SB.dat '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/amber'
make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/amber'
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/amber'
Making install in builder
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/builder'
make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/builder'
make[3]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/builder'
 /usr/bin/install -p -m 644 amino.txt nucleic.txt '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/builder'
make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/builder'
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/builder'
Making install in param_mm
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm'
Making install in default
make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/default'
make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/default'
make[4]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/param_mm/default'
 /usr/bin/install -p -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/param_mm/default'
make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/default'
make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/default'
Making install in prmfit
make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/prmfit'
make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/prmfit'
make[4]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/param_mm/prmfit'
 /usr/bin/install -p -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/param_mm/prmfit'
make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/prmfit'
make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/prmfit'
Making install in tripos52
make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/tripos52'
make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/tripos52'
make[4]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/param_mm/tripos52'
 /usr/bin/install -p -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt parameters5.txt '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/param_mm/tripos52'
make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/tripos52'
make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/tripos52'
make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm'
make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm'
make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm'
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm'
Making install in param_sf
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf'
Making install in default
make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf/default'
make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf/default'
make[4]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/param_sf/default'
 /usr/bin/install -p -m 644 loopdip.txt looptor.txt nonbonded.txt '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/libghemical/3.0.0/param_sf/default'
make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf/default'
make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf/default'
make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf'
make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf'
make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf'
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin'
make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin'
make[3]: Nothing to be done for 'install-exec-am'.
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin'
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin'
make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin'
Making install in po
make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po'
linguas="de fi mk pt_BR ru sq "; \
for lang in $linguas; do \
  dir=/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/locale/$lang/LC_MESSAGES; \
  /bin/sh /builddir/build/BUILD/libghemical-3.0.0/install-sh -d $dir; \
  if test -r $lang.gmo; then \
    /usr/bin/install -p -m 644 $lang.gmo $dir/libghemical.mo; \
    echo "installing $lang.gmo as $dir/libghemical.mo"; \
  else \
    /usr/bin/install -p -m 644 ./$lang.gmo $dir/libghemical.mo; \
    echo "installing ./$lang.gmo as" \
	 "$dir/libghemical.mo"; \
  fi; \
  if test -r $lang.gmo.m; then \
    /usr/bin/install -p -m 644 $lang.gmo.m $dir/libghemical.mo.m; \
    echo "installing $lang.gmo.m as $dir/libghemical.mo.m"; \
  else \
    if test -r ./$lang.gmo.m ; then \
      /usr/bin/install -p -m 644 ./$lang.gmo.m \
	$dir/libghemical.mo.m; \
      echo "installing ./$lang.gmo.m as" \
	   "$dir/libghemical.mo.m"; \
    else \
      true; \
    fi; \
  fi; \
done
installing de.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/locale/de/LC_MESSAGES/libghemical.mo
installing fi.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/locale/fi/LC_MESSAGES/libghemical.mo
installing mk.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/locale/mk/LC_MESSAGES/libghemical.mo
installing pt_BR.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/locale/pt_BR/LC_MESSAGES/libghemical.mo
installing ru.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/locale/ru/LC_MESSAGES/libghemical.mo
installing sq.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/locale/sq/LC_MESSAGES/libghemical.mo
make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po'
make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0'
make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0'
make[2]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/lib64/pkgconfig'
 /usr/bin/install -p -m 644 libghemical.pc '/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/lib64/pkgconfig'
make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0'
make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0'
+ find /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/lib64 -name '*.la' -exec rm -rf '{}' ';'
+ /usr/lib/rpm/find-lang.sh /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64 libghemical
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 3.0.0-18.fc37 --unique-debug-suffix -3.0.0-18.fc37.x86_64 --unique-debug-src-base libghemical-3.0.0-18.fc37.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/libghemical-3.0.0
extracting debug info from /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/lib64/libghemical.so.5.0.1
original debug info size: 10388kB, size after compression: 8940kB
/usr/bin/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
2117 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0
+ /usr/lib/rpm/redhat/brp-python-hardlink
Processing files: libghemical-3.0.0-18.fc37.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.x6kx8Y
+ umask 022
+ cd /builddir/build/BUILD
+ cd libghemical-3.0.0
+ DOCDIR=/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/doc/libghemical
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/doc/libghemical
+ cp -pr AUTHORS /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/doc/libghemical
+ cp -pr ChangeLog /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/doc/libghemical
+ cp -pr TODO /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/doc/libghemical
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ELsAv4
+ umask 022
+ cd /builddir/build/BUILD
+ cd libghemical-3.0.0
+ LICENSEDIR=/builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/licenses/libghemical
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/licenses/libghemical
+ cp -pr COPYING /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64/usr/share/licenses/libghemical
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: libghemical = 3.0.0-18.fc37 libghemical(x86-64) = 3.0.0-18.fc37 libghemical.so.5()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libSCbasis.so.7()(64bit) libSCcints.so.7()(64bit) libSCclass.so.7()(64bit) libSCcontainer.so.7()(64bit) libSCdft.so.7()(64bit) libSCgroup.so.7()(64bit) libSCintv3.so.7()(64bit) libSCisosurf.so.7()(64bit) libSCkeyval.so.7()(64bit) libSCmbpt.so.7()(64bit) libSCmbptr12.so.7()(64bit) libSCmisc.so.7()(64bit) libSCmolecule.so.7()(64bit) libSCoint3.so.7()(64bit) libSCoptimize.so.7()(64bit) libSCoptions.so.7()(64bit) libSCpsi.so.7()(64bit) libSCref.so.7()(64bit) libSCrender.so.7()(64bit) libSCscf.so.7()(64bit) libSCscmat.so.7()(64bit) libSCsolvent.so.7()(64bit) libSCstate.so.7()(64bit) libSCsymmetry.so.7()(64bit) libSCwfn.so.7()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libderiv-stable.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgfortran.so.5()(64bit) libint-stable.so.1()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmopac7.so.1()(64bit) libquadmath.so.0()(64bit) libr12-stable.so.1()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH)
Processing files: libghemical-devel-3.0.0-18.fc37.x86_64
Provides: libghemical-devel = 3.0.0-18.fc37 libghemical-devel(x86-64) = 3.0.0-18.fc37 pkgconfig(libghemical) = 3.0.0
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/pkg-config libghemical.so.5()(64bit) pkgconfig(libmopac7)
Processing files: libghemical-debugsource-3.0.0-18.fc37.x86_64
Provides: libghemical-debugsource = 3.0.0-18.fc37 libghemical-debugsource(x86-64) = 3.0.0-18.fc37
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: libghemical-debuginfo-3.0.0-18.fc37.x86_64
Provides: debuginfo(build-id) = 0a2910bb241b4e5f3fe0857b3130b188cfc58c0d libghemical-debuginfo = 3.0.0-18.fc37 libghemical-debuginfo(x86-64) = 3.0.0-18.fc37 libghemical.so.5.0.1-3.0.0-18.fc37.x86_64.debug()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: libghemical-debugsource(x86-64) = 3.0.0-18.fc37
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64
Wrote: /builddir/build/RPMS/libghemical-3.0.0-18.fc37.x86_64.rpm
Wrote: /builddir/build/RPMS/libghemical-debugsource-3.0.0-18.fc37.x86_64.rpm
Wrote: /builddir/build/RPMS/libghemical-devel-3.0.0-18.fc37.x86_64.rpm
Wrote: /builddir/build/RPMS/libghemical-debuginfo-3.0.0-18.fc37.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.T0EeJl
+ umask 022
+ cd /builddir/build/BUILD
+ cd libghemical-3.0.0
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/libghemical-3.0.0-18.fc37.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.EcY4po
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf libghemical-3.0.0 libghemical-3.0.0.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0