Name: jhdf5 Version: 3.3.2 Release: 10%{?dist} Summary: Java HDF5 Package License: BSD with advertising URL: https://support.hdfgroup.org/products/java/ Source0: https://support.hdfgroup.org/ftp/HDF5/releases/HDF-JAVA/hdfjni-%{version}/src/HDFJava-%{version}-Source.tar.gz Patch0: jhdf5-jdk11.patch Patch1: jhdf5-0001-add-a-generic-linux-host.patch Patch3: jhdf5-0003-use-system-linker-for-shared-library.patch Patch4: libdf.diff BuildRequires: autoconf BuildRequires: sed BuildRequires: hdf-static BuildRequires: hdf5-devel BuildRequires: java-devel BuildRequires: javapackages-local BuildRequires: libjpeg-devel BuildRequires: slf4j BuildRequires: junit BuildRequires: ImageMagick BuildRequires: desktop-file-utils BuildRequires: make Requires: java-headless Requires: javapackages-tools Requires: slf4j # hdf5 does not bump soname but check at runtime Requires: hdf5 = %{_hdf5_version} %global _description %{expand: HDF is a versatile data model that can represent very complex data objects and a wide variety of meta-data. It is a completely portable file format with no limit on the number or size of data objects in the collection.} %description %_description This Java package wraps the native HDF5 library. %package devel Summary: JHDF5 development files Requires: %{name} = %{version}-%{release} Requires: hdf5-devel %description devel JHDF5 development headers and libraries. %package -n jhdf Summary: Java HDF Package Requires: java-headless Requires: javapackages-tools Requires: slf4j %description -n jhdf %_description This Java package wraps the native HDF4 library. %package javadoc Summary: Javadoc for %{name} %description javadoc This package contains javadoc for %{name}. %prep %autosetup -n hdfjava-%{version} -p1 # remove useless writability check sed -r -i '/-d "\$JH45INST"/ {N; N; N; N; N; N; d;}' configure # remove shipped jars find -name '*.jar' -print -delete # build jar repo build-jar-repository -p lib/ junit slf4j- ln -s slf4j-api.jar lib/slf4j-api-1.7.5.jar ln -s slf4j-nop.jar lib/slf4j-nop-1.7.5.jar # Prevent javadoc build failure sed -i -e 's/$(JAVADOC_FLAGS)/$(JAVADOC_FLAGS) -Xdoclint:none/' \ -e 's,-sourcepath,-classpath $(CLASSPATH)/lib/slf4j-api-1.7.5.jar -sourcepath,' Makefile* # Add missing H4_ prefixes, also # neuter H5_VERS_RELEASE check (the number has gone down in recent releases!) find . -name \*.c -type f \( \ -exec grep -q -P '\bMAX_(NC_NAME|VAR_DIMS)\b' {} \; -print \ -exec sed -i -r 's/\bMAX_(NC_NAME|VAR_DIMS)\b/H4_&/g' {} \; \ -o \ -exec grep -q -P '\bH5_VERS_RELEASE\b' {} \; -print \ -exec sed -i -r 's/H5_VERS_RELEASE >=? [^)]*/1/' {} \; \ \) # artifacts location %mvn_package org.hdfgroup:jhdf5 jhdf5 %mvn_file org.hdfgroup:jhdf5 jhdf5 %mvn_package org.hdfgroup:jhdf jhdf %mvn_file org.hdfgroup:jhdf jhdf %global nowarn -Wno-maybe-uninitialized -Wno-unused-but-set-variable -Wno-unused-variable -Wno-unused-function %global compat -DH5Fget_info_vers=1 -DH5Rdereference_vers=1 %build export CPPFLAGS='-I%{java_home}/include/linux' %configure --with-jdk=%{java_home}/include,%{java_home}/lib \ --with-hdf5=%{_includedir},%{_libdir} \ --with-hdf4=%{_includedir}/hdf,%{_libdir}/hdf \ --with-libsz=%{_includedir},%{_libdir} \ --with-libz=%{_includedir},%{_libdir} \ --with-libjpeg=%{_includedir},%{_libdir} make natives JPEGLIB=-ljpeg ZLIB=-lz HDF5LIB=-lhdf5 SZLIB=-lsz \ CC='gcc -shared %{optflags} -fPIC %nowarn %compat' \ LDOPT='%{?__global_ldflags} -shared' make -C hdf make packages javadocs %check make tests %install # jars and depmap %mvn_artifact org.hdfgroup:jhdf5:%{version} lib/jhdf5.jar %mvn_artifact org.hdfgroup:jhdf:%{version} lib/jhdf.jar %mvn_install -J docs/javadocs rm -r docs/javadocs install -Dm744 -t%{buildroot}%{_libdir}/jhdf/ lib/*/libjhdf.so install -Dm744 -t%{buildroot}%{_libdir}/jhdf5/ lib/*/libjhdf5.so %global _docdir_fmt %{name} %files -f .mfiles-jhdf5 %attr(755,root,root) %{_libdir}/jhdf5/libjhdf5.so %doc Readme.txt %license COPYING %files -n jhdf -f .mfiles-jhdf %attr(755,root,root) %{_libdir}/jhdf/libjhdf.so %license COPYING %files javadoc -f .mfiles-javadoc %license COPYING %changelog * Tue Jan 26 2021 Fedora Release Engineering - 3.3.2-10 - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild * Mon Oct 12 2020 Orion Poplawski - 3.3.2-9 - Fix build with openjdk11 * Sat Aug 01 2020 Fedora Release Engineering - 3.3.2-8 - Second attempt - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Tue Jul 28 2020 Fedora Release Engineering - 3.3.2-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Fri Jul 10 2020 Jiri Vanek - 3.3.2-6 - Rebuilt for JDK-11, see https://fedoraproject.org/wiki/Changes/Java11 * Thu Jun 25 2020 Orion Poplawski - 3.3.2-5 - Rebuild for hdf5 1.10.6 * Wed Jan 29 2020 Fedora Release Engineering - 3.3.2-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild * Sat Aug 3 2019 Zbigniew Jędrzejewski-Szmek - 3.3.2-3 - Add various workarounds to fix build with new HDF5 (#1735866) * Thu Jul 25 2019 Fedora Release Engineering - 3.3.2-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild * Fri Feb 01 2019 Fedora Release Engineering - 3.3.2-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild * Fri Jul 13 2018 Fedora Release Engineering - 3.2.1-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Feb 20 2018 Orion Poplawski - 3.2.1-6 - Rebuild for hdf5 1.8.20 - Build with libsz support * Wed Feb 07 2018 Fedora Release Engineering - 3.2.1-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Wed Aug 02 2017 Fedora Release Engineering - 3.2.1-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild * Wed Jul 26 2017 Fedora Release Engineering - 3.2.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild * Fri Feb 10 2017 Fedora Release Engineering - 3.2.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild * Thu Dec 8 2016 Zbigniew Jędrzejewski-Szmek - 3.2.1-1 - Update to latest release - jdfhobj* and hdfview have been split out, so those subpackages are dropped, and will have to be provided by a new source package. * Tue Dec 06 2016 Orion Poplawski - 2.11.0-9 - Rebuild for hdf5 1.8.18 * Wed Jun 29 2016 Orion Poplawski - 2.11.0-8 - Rebuild for hdf5 1.8.17 * Mon Mar 28 2016 gil cattaneo 2.11.0-7 - generate maven depmap and javadoc - add javadoc sub package - minor changes to adapt to current guideline - fix some rpmlint problems - introduce license macro * Thu Feb 04 2016 Fedora Release Engineering - 2.11.0-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild * Thu Jan 21 2016 Orion Poplawski - 2.11.0-5 - Rebuild for hdf5 1.8.16 * Sat Dec 12 2015 Orion Poplawski - 2.11.0-4 - BR hdf-static * Wed Jun 17 2015 Fedora Release Engineering - 2.11.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild * Sun May 17 2015 Orion Poplawski - 2.11.0-2 - Rebuild for hdf5 1.8.15 * Wed Jan 7 2015 Orion Poplawski - 2.11.0-1 - Update to 2.11.0 * Mon Sep 08 2014 Rex Dieter 2.10.1-4 - hdfview: update mime scriptlet, fix icon scriptlet * Sat Aug 16 2014 Fedora Release Engineering - 2.10.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild * Tue Jul 15 2014 Clément David - 2.10.1-2 - rebuilt * Thu Jul 03 2014 Clément David - 2.10.1-1 - Update to jhdf5 1.10.1 * Tue Jun 10 2014 Orion Poplawski - 2.10-3 - Rebuild for hdf 1.8.13 * Sun Jun 08 2014 Fedora Release Engineering - 2.10-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild * Fri Feb 28 2014 Clément David - 2.10-1 - Update version - Change R:java to R:java-headless (Bug 1068283). * Fri Dec 27 2013 Orion Poplawski - 2.9-4 - Rebuild for hdf5 1.8.12 * Sat Aug 03 2013 Fedora Release Engineering - 2.9-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild * Thu May 16 2013 Orion Poplawski - 2.9-2 - Rebuild for hdf5 1.8.11 * Thu Jan 24 2013 Clément David - 2.9-1 - Update to 2.9 - Upgrade to the Java packaging draft (JNI jar/so location) * Fri Jan 18 2013 Adam Tkac - 2.8-10 - rebuild due to "jpeg8-ABI" feature drop * Wed Dec 19 2012 Stanislav Ochotnicky - 2.8-9 - revbump after jnidir change * Mon Dec 03 2012 Orion Poplawski - 2.8-8 - Rebuild for hdf5 1.8.10 - Add BR libjpeg-devel * Thu Jul 19 2012 Fedora Release Engineering - 2.8-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild * Tue May 15 2012 Orion Poplawski - 2.8-6 - Rebuild with hdf5 1.8.9 * Mon Feb 13 2012 Clément David - 2.8-5 - bump version to depends on latest hdf5 * Tue Jan 31 2012 Clément David - 2.8-4 - fix hdfview CLASSPATH * Mon Jan 30 2012 Clément David - 2.8-3 - split jhdfobj as an object oriented API of jhdf and jhdf5. * Fri Jan 27 2012 Clément David - 2.8-2 - use %%{_hdf5_version} for hdfview - use same jhdf and jhdf5 versions for hdfview * Wed Jan 25 2012 Clément David - 2.8-1 - update to version 2.8 * Wed Jan 25 2012 Clément David - 2.7-9 - move jars to more standard locations * Fri Jan 13 2012 Fedora Release Engineering - 2.7-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild * Tue Nov 22 2011 Orion Poplawski - 2.7-7 - use %%{_hdf5_version} * Thu Nov 17 2011 Clément David - 2.7-6 - use %%{hdf5ver} to avoid runtime crash * Thu Nov 03 2011 Clément David - 2.7-5 - rebuilt * Thu Nov 3 2011 Clément David - 2.7-4 - remove rpm-build BuildRequire * Tue Oct 25 2011 Clément David - 2.7-3 - Fix executable permissions - pass rpmlint * Tue Aug 16 2011 Clément David - 2.7-2 - Update mime types to x-hdf and x-hdf5 * Tue Aug 16 2011 Clément David - 2.7-1 - Initial packaging