Mock Version: 2.9 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/libneurosim.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1611942462.979155/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.qy59s251:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.qy59s251:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '763ce339900b4579993fcb559939652c', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1611942462.979155/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.qy59s251:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/libneurosim.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1611619200 Wrote: /builddir/build/SRPMS/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/libneurosim.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1611942462.979155/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.qy59s251:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.qy59s251:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'b9387be46a5d43059c241e9f5a4c5b8c', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1611942462.979155/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.qy59s251:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/libneurosim.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1611619200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.kNMDJU + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + /usr/bin/mkdir -p libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + cd libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + /usr/bin/tar -xof - + /usr/bin/gzip -dc /builddir/build/SOURCES/libneurosim-afc003f.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + cp -v libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/COPYING . 'libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/COPYING' -> './COPYING' + cp -v libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/README.md . 'libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/README.md' -> './README.md' + cp -a libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich + cp -a libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.sEr3JA + umask 022 + cd /builddir/build/BUILD ~/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 ~/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + cd libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + MPI_COMPILE_TYPE= + PYTHON_VERSION=3 + MPI_YES=no + MPI_HOME=/usr + MPI_LIB=/usr/lib64 + MPI_INCLUDE=/usr/include + MPI_BIN=/usr/bin + MPI_MAN=/usr/share/man + MPICC=gcc + MPICXX=g++ + pushd libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + ./autogen.sh aclocal -I /usr/share/aclocal configure.ac:4: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:4: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... /usr/share/aclocal-1.16/obsolete.m4:11: AM_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:130: warning: The macro `AC_AIX' is obsolete. configure.ac:130: You should run autoupdate. ./lib/autoconf/specific.m4:540: AC_AIX is expanded from... configure.ac:130: the top level configure.ac:219: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:219: You should run autoupdate. /usr/share/aclocal/libtool.m4:99: AC_PROG_LIBTOOL is expanded from... configure.ac:219: the top level configure.ac:222: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete. configure.ac:222: You should run autoupdate. ./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from... configure.ac:222: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level libtoolize --force --copy --automake --ltdl autoheader autoconf configure.ac:4: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:4: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:768: AM_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:130: warning: The macro `AC_AIX' is obsolete. configure.ac:130: You should run autoupdate. ./lib/autoconf/specific.m4:540: AC_AIX is expanded from... configure.ac:130: the top level configure.ac:219: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:219: You should run autoupdate. aclocal.m4:1541: AC_PROG_LIBTOOL is expanded from... configure.ac:219: the top level configure.ac:222: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete. configure.ac:222: You should run autoupdate. ./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from... configure.ac:222: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level automake --foreign --copy --add-missing configure.ac:4: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:4: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:768: AM_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:130: warning: The macro `AC_AIX' is obsolete. configure.ac:130: You should run autoupdate. ./lib/autoconf/specific.m4:540: AC_AIX is expanded from... configure.ac:130: the top level configure.ac:219: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:219: You should run autoupdate. aclocal.m4:1541: AC_PROG_LIBTOOL is expanded from... configure.ac:219: the top level configure.ac:222: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete. configure.ac:222: You should run autoupdate. ./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from... configure.ac:222: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level Now run configure and make. + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + ./configure CC=gcc CXX=g++ --disable-static --disable-silent-rules --with-python=3 --with-mpi=no --prefix=/usr --libdir=/usr/lib64 --includedir=/usr/include --bindir=/usr/bin --mandir=/usr/share/man checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking whether we are configuring for Blue Gene... no checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for wchar.h... yes checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking whether _XOPEN_SOURCE should be defined... no checking for gcc... (cached) gcc checking whether the compiler supports GNU C... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to enable C11 features... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... gcc3 checking for a Python interpreter with version >= "3"... python3 checking for python3... /usr/bin/python3 checking for python3 version... 3.9 checking for python3 platform... linux checking for python3 script directory... ${prefix}/lib/python3.9/site-packages checking for python3 extension module directory... ${exec_prefix}/lib64/python3.9/site-packages Platform: x86_64-pc-linux-gnu Compiler : gcc Using AM_CFLAGS= -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Platform: x86_64-pc-linux-gnu Compiler : g++ Using AM_CXXFLAGS= -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Using AM_LDFLAGS= -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking how to print strings... printf checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating neurosim/Makefile config.status: creating neurosim/config.h config.status: creating neurosim/version.h config.status: creating neurosim/examples/Makefile config.status: creating libpyneurosim/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in libltdl (/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr' 'CC=gcc' 'CXX=g++' '--disable-static' '--disable-silent-rules' '--with-python=3' '--with-mpi=no' '--libdir=/usr/lib64' '--includedir=/usr/include' '--bindir=/usr/bin' '--mandir=/usr/share/man' 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LT_SYS_LIBRARY_PATH=/usr/lib64:' '--enable-ltdl-convenience' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /usr/lib64 /lib64 /usr/lib64 /lib /usr/lib checking how gcc reports undeclared, standard C functions... error checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j2 V=1 VERBOSE=1 STRIP=/bin/true /usr/bin/make all-recursive Making all in libltdl make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/missing aclocal-1.16 -I m4 make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/missing autoconf make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/missing automake-1.16 --foreign make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --disable-option-checking --prefix=/usr CC=gcc CXX=g++ --disable-static --disable-silent-rules --with-python=3 --with-mpi=no --libdir=/usr/lib64 --includedir=/usr/include --bindir=/usr/bin --mandir=/usr/share/man CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LT_SYS_LIBRARY_PATH=/usr/lib64: --enable-ltdl-convenience --cache-file=/dev/null --srcdir=. --no-create --no-recursion checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... /bin/true checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /usr/lib64 /lib64 /usr/lib64 /lib /usr/lib checking for gcc options needed to detect all undeclared functions... none needed checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /bin/sh ./config.status config.status: creating Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/missing autoheader) rm -f stamp-h1 touch config-h.in make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' cd . && /bin/sh ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /usr/bin/make all-am make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c lt__alloc.c -fPIC -DPIC -o .libs/libltdlc_la-lt__alloc.o mv -f .deps/libltdlc_la-lt__alloc.Tpo .deps/libltdlc_la-lt__alloc.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || echo './'`lt_dlloader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c lt_dlloader.c -fPIC -DPIC -o .libs/libltdlc_la-lt_dlloader.o mv -f .deps/libltdlc_la-lt_dlloader.Tpo .deps/libltdlc_la-lt_dlloader.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c -o libltdlc_la-lt_error.lo `test -f 'lt_error.c' || echo './'`lt_error.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c lt_error.c -fPIC -DPIC -o .libs/libltdlc_la-lt_error.o mv -f .deps/libltdlc_la-lt_error.Tpo .deps/libltdlc_la-lt_error.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c -o libltdlc_la-slist.lo `test -f 'slist.c' || echo './'`slist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c slist.c -fPIC -DPIC -o .libs/libltdlc_la-slist.o mv -f .deps/libltdlc_la-slist.Tpo .deps/libltdlc_la-slist.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' depbase=`echo lt__strl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF $depbase.Tpo -c -o lt__strl.lo lt__strl.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c lt__strl.c -fPIC -DPIC -o .libs/lt__strl.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' depbase=`echo loaders/dlopen.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF $depbase.Tpo -c -o loaders/dlopen.lo loaders/dlopen.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF loaders/.deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o loaders/.libs/dlopen.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c -o libltdlc_la-ltdl.lo `test -f 'ltdl.c' || echo './'`ltdl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c ltdl.c -fPIC -DPIC -o .libs/libltdlc_la-ltdl.o mv -f .deps/libltdlc_la-ltdl.Tpo .deps/libltdlc_la-ltdl.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c -o loaders/libltdlc_la-preopen.lo `test -f 'loaders/preopen.c' || echo './'`loaders/preopen.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c loaders/preopen.c -fPIC -DPIC -o loaders/.libs/libltdlc_la-preopen.o mv -f loaders/.deps/libltdlc_la-preopen.Tpo loaders/.deps/libltdlc_la-preopen.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -module -avoid-version -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o dlopen.la loaders/dlopen.lo -ldl libtool: link: ar cru .libs/dlopen.a loaders/.libs/dlopen.o libtool: link: ranlib .libs/dlopen.a libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -no-undefined -dlpreopen dlopen.la -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libltdlc.la loaders/libltdlc_la-preopen.lo libltdlc_la-lt__alloc.lo libltdlc_la-lt_dlloader.lo libltdlc_la-lt_error.lo libltdlc_la-ltdl.lo libltdlc_la-slist.lo lt__strl.lo libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT libtool: link: rm -f ".libs/libltdlc.nmI" libtool: link: (cd .libs && gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -fno-builtin -fPIC -DPIC "libltdlcS.c") libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/libltdlc.nmS" ".libs/libltdlc.nmT" ".libs/libltdlc.nmI" libtool: link: (cd .libs/libltdlc.lax/dlopen.a && ar x "/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl/./.libs/dlopen.a") libtool: link: ar cru .libs/libltdlc.a loaders/.libs/libltdlc_la-preopen.o .libs/libltdlc_la-lt__alloc.o .libs/libltdlc_la-lt_dlloader.o .libs/libltdlc_la-lt_error.o .libs/libltdlc_la-ltdl.o .libs/libltdlc_la-slist.o .libs/lt__strl.o .libs/libltdlcS.o .libs/libltdlc.lax/dlopen.a/dlopen.o libtool: link: ranlib .libs/libltdlc.a libtool: link: rm -fr .libs/libltdlc.lax libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' Making all in neurosim Making all in . make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' depbase=`echo connection_generator_V2_0.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator_V2_0.lo -MD -MP -MF $depbase.Tpo -c -o connection_generator_V2_0.lo connection_generator_V2_0.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator_V2_0.lo -MD -MP -MF .deps/connection_generator_V2_0.Tpo -c connection_generator_V2_0.cpp -fPIC -DPIC -o .libs/connection_generator_V2_0.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' depbase=`echo version.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF $depbase.Tpo -c -o version.lo version.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c -fPIC -DPIC -o .libs/version.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' depbase=`echo connection_generator.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator.lo -MD -MP -MF $depbase.Tpo -c -o connection_generator.lo connection_generator.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator.lo -MD -MP -MF .deps/connection_generator.Tpo -c connection_generator.cpp -fPIC -DPIC -o .libs/connection_generator.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' /bin/sh ../libtool --tag=CXX --mode=link g++ -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o libneurosim.la -rpath /usr/lib64 connection_generator.lo connection_generator_V2_0.lo version.lo ../libltdl/libltdlc.la libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/11/crtbeginS.o .libs/connection_generator.o .libs/connection_generator_V2_0.o .libs/version.o -Wl,--whole-archive ../libltdl/.libs/libltdlc.a -Wl,--no-whole-archive -ldl -L/usr/lib/gcc/x86_64-redhat-linux/11 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/11/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crtn.o -g -O3 -O2 -flto=auto -g -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-soname -Wl,libneurosim.so.0 -o .libs/libneurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libneurosim.so.0" && ln -s "libneurosim.so.0.0.0" "libneurosim.so.0") libtool: link: (cd ".libs" && rm -f "libneurosim.so" && ln -s "libneurosim.so.0.0.0" "libneurosim.so") libtool: link: ( cd ".libs" && rm -f "libneurosim.la" && ln -s "../libneurosim.la" "libneurosim.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' connection_generator.cpp:109:8: warning: type 'struct CGImplementation' violates the C++ One Definition Rule [-Wodr] 109 | struct CGImplementation { | ^ connection_generator_V2_0.cpp:137:8: note: a different type is defined in another translation unit 137 | struct CGImplementation { | ^ connection_generator.cpp:119:15: note: the first difference of corresponding definitions is field 'CGFromXML' 119 | ParseCGFunc CGFromXML; | ^ connection_generator_V2_0.cpp:147:27: note: a field of same name but different type is defined in another translation unit 147 | CGEN::V2_0::ParseCGFunc CGFromXML; | ^ connection_generator.cpp:109:8: note: type 'struct CGImplementation' itself violates the C++ One Definition Rule 109 | struct CGImplementation { | ^ connection_generator_V2_0.cpp:137:8: note: the incompatible type is defined here 137 | struct CGImplementation { | ^ connection_generator.cpp:109:8: note: type 'struct CGImplementation' itself violates the C++ One Definition Rule 109 | struct CGImplementation { | ^ connection_generator_V2_0.cpp:137:8: note: the incompatible type is defined here 137 | struct CGImplementation { | ^ ../libltdl/.libs/libltdlcS.c:27:12: warning: type of 'dlopen_LTX_get_vtable' does not match original declaration [-Wlto-type-mismatch] ../libltdl/loaders/dlopen.c:61:1: note: return value type mismatch 61 | get_vtable (lt_user_data loader_data) | ^ ../libltdl/loaders/dlopen.c:61:1: note: 'dlopen_LTX_get_vtable' was previously declared here ../libltdl/loaders/dlopen.c:61:1: note: code may be misoptimized unless '-fno-strict-aliasing' is used Making all in examples make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT simulator-model.o -MD -MP -MF .deps/simulator-model.Tpo -c -o simulator-model.o simulator-model.cpp mv -f .deps/simulator-model.Tpo .deps/simulator-model.Po make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT runiter1.o -MD -MP -MF .deps/runiter1.Tpo -c -o runiter1.o runiter1.cpp mv -f .deps/runiter1.Tpo .deps/runiter1.Po make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' g++ -DHAVE_CONFIG_H -I. -I../.. -I../.. -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT runiter2.o -MD -MP -MF .deps/runiter2.Tpo -c -o runiter2.o runiter2.cpp mv -f .deps/runiter2.Tpo .deps/runiter2.Po make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' /bin/sh ../../libtool --tag=CXX --mode=link g++ -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o runiter1 runiter1.o simulator-model.o ../../neurosim/libneurosim.la libtool: link: g++ -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o .libs/runiter1 runiter1.o simulator-model.o ../../neurosim/.libs/libneurosim.so -ldl make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' /bin/sh ../../libtool --tag=CXX --mode=link g++ -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o runiter2 runiter2.o simulator-model.o ../../neurosim/libneurosim.la libtool: link: g++ -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o .libs/runiter2 runiter2.o simulator-model.o ../../neurosim/.libs/libneurosim.so -ldl make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' Making all in libpyneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I./../neurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c -o libpy3neurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I./../neurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpy3neurosim_la-pyneurosim.o mv -f .deps/libpy3neurosim_la-pyneurosim.Tpo .deps/libpy3neurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link g++ -I/usr/include/python3.9 -I./../neurosim/conngen ../neurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64 libpy3neurosim_la-pyneurosim.lo libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/11/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/.libs ../neurosim/.libs/libneurosim.so -ldl -L/usr/lib/gcc/x86_64-redhat-linux/11 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/11/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so.0 -o .libs/libpy3neurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libpy3neurosim.so.0" && ln -s "libpy3neurosim.so.0.0.0" "libpy3neurosim.so.0") libtool: link: (cd ".libs" && rm -f "libpy3neurosim.so" && ln -s "libpy3neurosim.so.0.0.0" "libpy3neurosim.so") libtool: link: ( cd ".libs" && rm -f "libpy3neurosim.la" && ln -s "../libpy3neurosim.la" "libpy3neurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libpyneurosim' + popd ~/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 46 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ~/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich ~/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + MPI_COMPILE_TYPE=-mpich + PYTHON_VERSION=3 + MPI_YES=yes + MPICC=mpicc + MPICXX=mpicxx + pushd libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich + ./autogen.sh aclocal -I /usr/share/aclocal configure.ac:4: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:4: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... /usr/share/aclocal-1.16/obsolete.m4:11: AM_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:130: warning: The macro `AC_AIX' is obsolete. configure.ac:130: You should run autoupdate. ./lib/autoconf/specific.m4:540: AC_AIX is expanded from... configure.ac:130: the top level configure.ac:219: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:219: You should run autoupdate. /usr/share/aclocal/libtool.m4:99: AC_PROG_LIBTOOL is expanded from... configure.ac:219: the top level configure.ac:222: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete. configure.ac:222: You should run autoupdate. ./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from... configure.ac:222: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level libtoolize --force --copy --automake --ltdl autoheader autoconf configure.ac:4: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:4: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:768: AM_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:130: warning: The macro `AC_AIX' is obsolete. configure.ac:130: You should run autoupdate. ./lib/autoconf/specific.m4:540: AC_AIX is expanded from... configure.ac:130: the top level configure.ac:219: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:219: You should run autoupdate. aclocal.m4:1541: AC_PROG_LIBTOOL is expanded from... configure.ac:219: the top level configure.ac:222: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete. configure.ac:222: You should run autoupdate. ./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from... configure.ac:222: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level automake --foreign --copy --add-missing configure.ac:4: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:4: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:768: AM_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:130: warning: The macro `AC_AIX' is obsolete. configure.ac:130: You should run autoupdate. ./lib/autoconf/specific.m4:540: AC_AIX is expanded from... configure.ac:130: the top level configure.ac:219: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:219: You should run autoupdate. aclocal.m4:1541: AC_PROG_LIBTOOL is expanded from... configure.ac:219: the top level configure.ac:222: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete. configure.ac:222: You should run autoupdate. ./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from... configure.ac:222: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level Now run configure and make. + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + ./configure CC=mpicc CXX=mpicxx --disable-static --disable-silent-rules --with-python=3 --with-mpi=yes --prefix=/usr/lib64/mpich --libdir=/usr/lib64/mpich/lib --includedir=/usr/include/mpich-x86_64 --bindir=/usr/lib64/mpich/bin --mandir=/usr/share/man/mpich-x86_64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking whether we are configuring for Blue Gene... no checking whether make supports the include directive... yes (GNU style) checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mpicc accepts -g... yes checking for mpicc option to enable C11 features... none needed checking whether mpicc understands -c and -o together... yes checking dependency style of mpicc... gcc3 checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for wchar.h... yes checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking whether _XOPEN_SOURCE should be defined... no checking for gcc... (cached) mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking whether the compiler supports GNU C++... yes checking whether mpicxx accepts -g... yes checking for mpicxx option to enable C++11 features... none needed checking dependency style of mpicxx... gcc3 checking for a Python interpreter with version >= "3"... python3 checking for python3... /usr/bin/python3 checking for python3 version... 3.9 checking for python3 platform... linux checking for python3 script directory... ${prefix}/lib/python3.9/site-packages checking for python3 extension module directory... ${exec_prefix}/lib64/python3.9/site-packages Platform: x86_64-pc-linux-gnu Compiler : gcc Using AM_CFLAGS= -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Platform: x86_64-pc-linux-gnu Compiler : g++ Using AM_CXXFLAGS= -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Using AM_LDFLAGS= -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking how to print strings... printf checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... no checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether mpicxx links MPI programs out of the box... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating neurosim/Makefile config.status: creating neurosim/config.h config.status: creating neurosim/version.h config.status: creating neurosim/examples/Makefile config.status: creating libpyneurosim/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in libltdl (/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/lib64/mpich' 'CC=mpicc' 'CXX=mpicxx' '--disable-static' '--disable-silent-rules' '--with-python=3' '--with-mpi=yes' '--libdir=/usr/lib64/mpich/lib' '--includedir=/usr/include/mpich-x86_64' '--bindir=/usr/lib64/mpich/bin' '--mandir=/usr/share/man/mpich-x86_64' 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LT_SYS_LIBRARY_PATH=/usr/lib64:' '--enable-ltdl-convenience' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mpicc accepts -g... yes checking for mpicc option to enable C11 features... none needed checking whether mpicc understands -c and -o together... yes checking dependency style of mpicc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /usr/lib64 /lib64 /usr/lib64 /lib /usr/lib checking how mpicc reports undeclared, standard C functions... error checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j2 V=1 VERBOSE=1 STRIP=/bin/true /usr/bin/make all-recursive Making all in libltdl make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/missing aclocal-1.16 -I m4 make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/missing autoconf make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/missing automake-1.16 --foreign make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --disable-option-checking --prefix=/usr/lib64/mpich CC=mpicc CXX=mpicxx --disable-static --disable-silent-rules --with-python=3 --with-mpi=yes --libdir=/usr/lib64/mpich/lib --includedir=/usr/include/mpich-x86_64 --bindir=/usr/lib64/mpich/bin --mandir=/usr/share/man/mpich-x86_64 CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LT_SYS_LIBRARY_PATH=/usr/lib64: --enable-ltdl-convenience --cache-file=/dev/null --srcdir=. --no-create --no-recursion checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mpicc accepts -g... yes checking for mpicc option to enable C11 features... none needed checking whether mpicc understands -c and -o together... yes checking dependency style of mpicc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... /bin/true checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /usr/lib64 /lib64 /usr/lib64 /lib /usr/lib checking for mpicc options needed to detect all undeclared functions... none needed checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /bin/sh ./config.status config.status: creating Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/missing autoheader) rm -f stamp-h1 touch config-h.in make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' cd . && /bin/sh ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /usr/bin/make all-am make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c lt__alloc.c -fPIC -DPIC -o .libs/libltdlc_la-lt__alloc.o mv -f .deps/libltdlc_la-lt__alloc.Tpo .deps/libltdlc_la-lt__alloc.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || echo './'`lt_dlloader.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c lt_dlloader.c -fPIC -DPIC -o .libs/libltdlc_la-lt_dlloader.o mv -f .deps/libltdlc_la-lt_dlloader.Tpo .deps/libltdlc_la-lt_dlloader.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c -o libltdlc_la-lt_error.lo `test -f 'lt_error.c' || echo './'`lt_error.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c lt_error.c -fPIC -DPIC -o .libs/libltdlc_la-lt_error.o mv -f .deps/libltdlc_la-lt_error.Tpo .deps/libltdlc_la-lt_error.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c -o libltdlc_la-slist.lo `test -f 'slist.c' || echo './'`slist.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c slist.c -fPIC -DPIC -o .libs/libltdlc_la-slist.o mv -f .deps/libltdlc_la-slist.Tpo .deps/libltdlc_la-slist.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' depbase=`echo lt__strl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF $depbase.Tpo -c -o lt__strl.lo lt__strl.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c lt__strl.c -fPIC -DPIC -o .libs/lt__strl.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c -o libltdlc_la-ltdl.lo `test -f 'ltdl.c' || echo './'`ltdl.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c ltdl.c -fPIC -DPIC -o .libs/libltdlc_la-ltdl.o mv -f .deps/libltdlc_la-ltdl.Tpo .deps/libltdlc_la-ltdl.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' depbase=`echo loaders/dlopen.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF $depbase.Tpo -c -o loaders/dlopen.lo loaders/dlopen.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF loaders/.deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o loaders/.libs/dlopen.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c -o loaders/libltdlc_la-preopen.lo `test -f 'loaders/preopen.c' || echo './'`loaders/preopen.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c loaders/preopen.c -fPIC -DPIC -o loaders/.libs/libltdlc_la-preopen.o mv -f loaders/.deps/libltdlc_la-preopen.Tpo loaders/.deps/libltdlc_la-preopen.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=link mpicc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -module -avoid-version -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o dlopen.la loaders/dlopen.lo -ldl libtool: link: ar cru .libs/dlopen.a loaders/.libs/dlopen.o libtool: link: ranlib .libs/dlopen.a libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /bin/sh ./libtool --tag=CC --mode=link mpicc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -no-undefined -dlpreopen dlopen.la -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libltdlc.la loaders/libltdlc_la-preopen.lo libltdlc_la-lt__alloc.lo libltdlc_la-lt_dlloader.lo libltdlc_la-lt_error.lo libltdlc_la-ltdl.lo libltdlc_la-slist.lo lt__strl.lo libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT libtool: link: rm -f ".libs/libltdlc.nmI" libtool: link: (cd .libs && mpicc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -fno-builtin -fPIC -DPIC "libltdlcS.c") libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/libltdlc.nmS" ".libs/libltdlc.nmT" ".libs/libltdlc.nmI" libtool: link: (cd .libs/libltdlc.lax/dlopen.a && ar x "/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl/./.libs/dlopen.a") libtool: link: ar cru .libs/libltdlc.a loaders/.libs/libltdlc_la-preopen.o .libs/libltdlc_la-lt__alloc.o .libs/libltdlc_la-lt_dlloader.o .libs/libltdlc_la-lt_error.o .libs/libltdlc_la-ltdl.o .libs/libltdlc_la-slist.o .libs/lt__strl.o .libs/libltdlcS.o .libs/libltdlc.lax/dlopen.a/dlopen.o libtool: link: ranlib .libs/libltdlc.a libtool: link: rm -fr .libs/libltdlc.lax libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' Making all in neurosim Making all in . make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' depbase=`echo connection_generator_V2_0.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator_V2_0.lo -MD -MP -MF $depbase.Tpo -c -o connection_generator_V2_0.lo connection_generator_V2_0.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator_V2_0.lo -MD -MP -MF .deps/connection_generator_V2_0.Tpo -c connection_generator_V2_0.cpp -fPIC -DPIC -o .libs/connection_generator_V2_0.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' depbase=`echo version.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF $depbase.Tpo -c -o version.lo version.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c -fPIC -DPIC -o .libs/version.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' depbase=`echo connection_generator.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator.lo -MD -MP -MF $depbase.Tpo -c -o connection_generator.lo connection_generator.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator.lo -MD -MP -MF .deps/connection_generator.Tpo -c connection_generator.cpp -fPIC -DPIC -o .libs/connection_generator.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o libneurosim.la -rpath /usr/lib64/mpich/lib connection_generator.lo connection_generator_V2_0.lo version.lo ../libltdl/libltdlc.la libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/11/crtbeginS.o .libs/connection_generator.o .libs/connection_generator_V2_0.o .libs/version.o -Wl,--whole-archive ../libltdl/.libs/libltdlc.a -Wl,--no-whole-archive -ldl -L/usr/lib64/mpich/lib -L/usr/lib/gcc/x86_64-redhat-linux/11 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/11/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crtn.o -g -O3 -O2 -flto=auto -g -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-soname -Wl,libneurosim.so.0 -o .libs/libneurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libneurosim.so.0" && ln -s "libneurosim.so.0.0.0" "libneurosim.so.0") libtool: link: (cd ".libs" && rm -f "libneurosim.so" && ln -s "libneurosim.so.0.0.0" "libneurosim.so") libtool: link: ( cd ".libs" && rm -f "libneurosim.la" && ln -s "../libneurosim.la" "libneurosim.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' connection_generator.cpp:109:8: warning: type 'struct CGImplementation' violates the C++ One Definition Rule [-Wodr] 109 | struct CGImplementation { | ^ connection_generator_V2_0.cpp:137:8: note: a different type is defined in another translation unit 137 | struct CGImplementation { | ^ connection_generator.cpp:119:15: note: the first difference of corresponding definitions is field 'CGFromXML' 119 | ParseCGFunc CGFromXML; | ^ connection_generator_V2_0.cpp:147:27: note: a field of same name but different type is defined in another translation unit 147 | CGEN::V2_0::ParseCGFunc CGFromXML; | ^ connection_generator.cpp:109:8: note: type 'struct CGImplementation' itself violates the C++ One Definition Rule 109 | struct CGImplementation { | ^ connection_generator_V2_0.cpp:137:8: note: the incompatible type is defined here 137 | struct CGImplementation { | ^ connection_generator.cpp:109:8: note: type 'struct CGImplementation' itself violates the C++ One Definition Rule 109 | struct CGImplementation { | ^ connection_generator_V2_0.cpp:137:8: note: the incompatible type is defined here 137 | struct CGImplementation { | ^ ../libltdl/.libs/libltdlcS.c:27:12: warning: type of 'dlopen_LTX_get_vtable' does not match original declaration [-Wlto-type-mismatch] ../libltdl/loaders/dlopen.c:61:1: note: return value type mismatch 61 | get_vtable (lt_user_data loader_data) | ^ ../libltdl/loaders/dlopen.c:61:1: note: 'dlopen_LTX_get_vtable' was previously declared here ../libltdl/loaders/dlopen.c:61:1: note: code may be misoptimized unless '-fno-strict-aliasing' is used Making all in examples make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../.. -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT simulator-model.o -MD -MP -MF .deps/simulator-model.Tpo -c -o simulator-model.o simulator-model.cpp mv -f .deps/simulator-model.Tpo .deps/simulator-model.Po make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../.. -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT runiter1.o -MD -MP -MF .deps/runiter1.Tpo -c -o runiter1.o runiter1.cpp mv -f .deps/runiter1.Tpo .deps/runiter1.Po make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../.. -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT runiter2.o -MD -MP -MF .deps/runiter2.Tpo -c -o runiter2.o runiter2.cpp mv -f .deps/runiter2.Tpo .deps/runiter2.Po make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' /bin/sh ../../libtool --tag=CXX --mode=link mpicxx -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o runiter1 runiter1.o simulator-model.o ../../neurosim/libneurosim.la libtool: link: mpicxx -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o .libs/runiter1 runiter1.o simulator-model.o ../../neurosim/.libs/libneurosim.so -ldl -Wl,-rpath -Wl,/usr/lib64/mpich/lib make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' /bin/sh ../../libtool --tag=CXX --mode=link mpicxx -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o runiter2 runiter2.o simulator-model.o ../../neurosim/libneurosim.la libtool: link: mpicxx -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o .libs/runiter2 runiter2.o simulator-model.o ../../neurosim/.libs/libneurosim.so -ldl -Wl,-rpath -Wl,/usr/lib64/mpich/lib make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' Making all in libpyneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I./../neurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c -o libpy3neurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I./../neurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpy3neurosim_la-pyneurosim.o mv -f .deps/libpy3neurosim_la-pyneurosim.Tpo .deps/libpy3neurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -I/usr/include/python3.9 -I./../neurosim/conngen ../neurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64/mpich/lib libpy3neurosim_la-pyneurosim.lo libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/11/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/.libs -Wl,-rpath -Wl,/usr/lib64/mpich/lib ../neurosim/.libs/libneurosim.so -ldl -L/usr/lib64/mpich/lib -L/usr/lib/gcc/x86_64-redhat-linux/11 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/11/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so.0 -o .libs/libpy3neurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libpy3neurosim.so.0" && ln -s "libpy3neurosim.so.0.0.0" "libpy3neurosim.so.0") libtool: link: (cd ".libs" && rm -f "libpy3neurosim.so" && ln -s "libpy3neurosim.so.0.0.0" "libpy3neurosim.so") libtool: link: ( cd ".libs" && rm -f "libpy3neurosim.la" && ln -s "../libpy3neurosim.la" "libpy3neurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libpyneurosim' + popd ~/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 46 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 46 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ~/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi ~/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export OMPI_MCA_rmaps_base_oversubscribe=1 + OMPI_MCA_rmaps_base_oversubscribe=1 + MPI_COMPILE_TYPE=-openmpi + PYTHON_VERSION=3 + MPI_YES=yes + MPICC=mpicc + MPICXX=mpicxx + pushd libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi + ./autogen.sh aclocal -I /usr/share/aclocal configure.ac:4: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:4: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... /usr/share/aclocal-1.16/obsolete.m4:11: AM_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:130: warning: The macro `AC_AIX' is obsolete. configure.ac:130: You should run autoupdate. ./lib/autoconf/specific.m4:540: AC_AIX is expanded from... configure.ac:130: the top level configure.ac:219: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:219: You should run autoupdate. /usr/share/aclocal/libtool.m4:99: AC_PROG_LIBTOOL is expanded from... configure.ac:219: the top level configure.ac:222: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete. configure.ac:222: You should run autoupdate. ./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from... configure.ac:222: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level libtoolize --force --copy --automake --ltdl autoheader autoconf configure.ac:4: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:4: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:768: AM_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:130: warning: The macro `AC_AIX' is obsolete. configure.ac:130: You should run autoupdate. ./lib/autoconf/specific.m4:540: AC_AIX is expanded from... configure.ac:130: the top level configure.ac:219: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:219: You should run autoupdate. aclocal.m4:1541: AC_PROG_LIBTOOL is expanded from... configure.ac:219: the top level configure.ac:222: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete. configure.ac:222: You should run autoupdate. ./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from... configure.ac:222: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level automake --foreign --copy --add-missing configure.ac:4: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:4: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:768: AM_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:130: warning: The macro `AC_AIX' is obsolete. configure.ac:130: You should run autoupdate. ./lib/autoconf/specific.m4:540: AC_AIX is expanded from... configure.ac:130: the top level configure.ac:219: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:219: You should run autoupdate. aclocal.m4:1541: AC_PROG_LIBTOOL is expanded from... configure.ac:219: the top level configure.ac:222: warning: The macro `AC_LANG_CPLUSPLUS' is obsolete. configure.ac:222: You should run autoupdate. ./lib/autoconf/c.m4:262: AC_LANG_CPLUSPLUS is expanded from... configure.ac:222: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level configure.ac:229: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:229: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:585: NS_NEW_PATH_MPI is expanded from... configure.ac:229: the top level Now run configure and make. + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + ./configure CC=mpicc CXX=mpicxx --disable-static --disable-silent-rules --with-python=3 --with-mpi=yes --prefix=/usr/lib64/openmpi --libdir=/usr/lib64/openmpi/lib --includedir=/usr/include/openmpi-x86_64 --bindir=/usr/lib64/openmpi/bin --mandir=/usr/share/man/openmpi-x86_64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking whether we are configuring for Blue Gene... no checking whether make supports the include directive... yes (GNU style) checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mpicc accepts -g... yes checking for mpicc option to enable C11 features... none needed checking whether mpicc understands -c and -o together... yes checking dependency style of mpicc... gcc3 checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for wchar.h... yes checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking whether _XOPEN_SOURCE should be defined... no checking for gcc... (cached) mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking whether the compiler supports GNU C++... yes checking whether mpicxx accepts -g... yes checking for mpicxx option to enable C++11 features... none needed checking dependency style of mpicxx... gcc3 checking for a Python interpreter with version >= "3"... python3 checking for python3... /usr/bin/python3 checking for python3 version... 3.9 checking for python3 platform... linux checking for python3 script directory... ${prefix}/lib/python3.9/site-packages checking for python3 extension module directory... ${exec_prefix}/lib64/python3.9/site-packages Platform: x86_64-pc-linux-gnu Compiler : gcc Using AM_CFLAGS= -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Platform: x86_64-pc-linux-gnu Compiler : g++ Using AM_CXXFLAGS= -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection Using AM_LDFLAGS= -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking how to print strings... printf checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... mpicxx -E checking for ld used by mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpicxx option to produce PIC... -fPIC -DPIC checking if mpicxx PIC flag -fPIC -DPIC works... yes checking if mpicxx static flag -static works... no checking if mpicxx supports -c -o file.o... yes checking if mpicxx supports -c -o file.o... (cached) yes checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether mpicxx links MPI programs out of the box... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating neurosim/Makefile config.status: creating neurosim/config.h config.status: creating neurosim/version.h config.status: creating neurosim/examples/Makefile config.status: creating libpyneurosim/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in libltdl (/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/lib64/openmpi' 'CC=mpicc' 'CXX=mpicxx' '--disable-static' '--disable-silent-rules' '--with-python=3' '--with-mpi=yes' '--libdir=/usr/lib64/openmpi/lib' '--includedir=/usr/include/openmpi-x86_64' '--bindir=/usr/lib64/openmpi/bin' '--mandir=/usr/share/man/openmpi-x86_64' 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LT_SYS_LIBRARY_PATH=/usr/lib64:' '--enable-ltdl-convenience' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mpicc accepts -g... yes checking for mpicc option to enable C11 features... none needed checking whether mpicc understands -c and -o together... yes checking dependency style of mpicc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /usr/lib64 /lib64 /usr/lib64 /lib /usr/lib checking how mpicc reports undeclared, standard C functions... error checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j2 V=1 VERBOSE=1 STRIP=/bin/true /usr/bin/make all-recursive Making all in libltdl make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/missing aclocal-1.16 -I m4 make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/missing autoconf make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/missing automake-1.16 --foreign make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --disable-option-checking --prefix=/usr/lib64/openmpi CC=mpicc CXX=mpicxx --disable-static --disable-silent-rules --with-python=3 --with-mpi=yes --libdir=/usr/lib64/openmpi/lib --includedir=/usr/include/openmpi-x86_64 --bindir=/usr/lib64/openmpi/bin --mandir=/usr/share/man/openmpi-x86_64 CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection LT_SYS_LIBRARY_PATH=/usr/lib64: --enable-ltdl-convenience --cache-file=/dev/null --srcdir=. --no-create --no-recursion checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mpicc accepts -g... yes checking for mpicc option to enable C11 features... none needed checking whether mpicc understands -c and -o together... yes checking dependency style of mpicc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... /bin/true checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... no checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... no checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking what extension is used for runtime loadable modules... .so checking what variable specifies run-time module search path... LD_LIBRARY_PATH checking for the default library search path... /usr/lib64 /lib64 /usr/lib64 /lib /usr/lib checking for mpicc options needed to detect all undeclared functions... none needed checking for library containing dlopen... -ldl checking for dlerror... yes checking for shl_load... (cached) no checking for shl_load in -ldld... (cached) no checking for dld_link in -ldld... no checking for _ prefix in compiled symbols... no checking whether deplibs are loaded by dlopen... yes checking for argz.h... yes checking for error_t... yes checking for argz_add... yes checking for argz_append... yes checking for argz_count... yes checking for argz_create_sep... yes checking for argz_insert... yes checking for argz_next... yes checking for argz_stringify... yes checking if argz actually works... yes checking whether libtool supports -dlopen/-dlpreopen... yes checking for unistd.h... (cached) yes checking for dl.h... no checking for sys/dl.h... no checking for dld.h... no checking for mach-o/dyld.h... no checking for dirent.h... yes checking for closedir... yes checking for opendir... yes checking for readdir... yes checking for strlcat... no checking for strlcpy... no checking that generated files are newer than configure... done configure: creating ./config.status make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /bin/sh ./config.status config.status: creating Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/sh /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/missing autoheader) rm -f stamp-h1 touch config-h.in make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' cd . && /bin/sh ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /usr/bin/make all-am make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c lt__alloc.c -fPIC -DPIC -o .libs/libltdlc_la-lt__alloc.o mv -f .deps/libltdlc_la-lt__alloc.Tpo .deps/libltdlc_la-lt__alloc.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || echo './'`lt_dlloader.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c lt_dlloader.c -fPIC -DPIC -o .libs/libltdlc_la-lt_dlloader.o mv -f .deps/libltdlc_la-lt_dlloader.Tpo .deps/libltdlc_la-lt_dlloader.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c -o libltdlc_la-lt_error.lo `test -f 'lt_error.c' || echo './'`lt_error.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c lt_error.c -fPIC -DPIC -o .libs/libltdlc_la-lt_error.o mv -f .deps/libltdlc_la-lt_error.Tpo .deps/libltdlc_la-lt_error.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c -o libltdlc_la-slist.lo `test -f 'slist.c' || echo './'`slist.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c slist.c -fPIC -DPIC -o .libs/libltdlc_la-slist.o mv -f .deps/libltdlc_la-slist.Tpo .deps/libltdlc_la-slist.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' depbase=`echo lt__strl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF $depbase.Tpo -c -o lt__strl.lo lt__strl.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c lt__strl.c -fPIC -DPIC -o .libs/lt__strl.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' depbase=`echo loaders/dlopen.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF $depbase.Tpo -c -o loaders/dlopen.lo loaders/dlopen.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/dlopen.lo -MD -MP -MF loaders/.deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o loaders/.libs/dlopen.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c -o libltdlc_la-ltdl.lo `test -f 'ltdl.c' || echo './'`ltdl.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c ltdl.c -fPIC -DPIC -o .libs/libltdlc_la-ltdl.o mv -f .deps/libltdlc_la-ltdl.Tpo .deps/libltdlc_la-ltdl.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=link mpicc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -module -avoid-version -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o dlopen.la loaders/dlopen.lo -ldl libtool: link: ar cru .libs/dlopen.a loaders/.libs/dlopen.o libtool: link: ranlib .libs/dlopen.a libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='' -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c -o loaders/libltdlc_la-preopen.lo `test -f 'loaders/preopen.c' || echo './'`loaders/preopen.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=" -DLTDL -I. -I. -Ilibltdl -I./libltdl -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT loaders/libltdlc_la-preopen.lo -MD -MP -MF loaders/.deps/libltdlc_la-preopen.Tpo -c loaders/preopen.c -fPIC -DPIC -o loaders/.libs/libltdlc_la-preopen.o mv -f loaders/.deps/libltdlc_la-preopen.Tpo loaders/.deps/libltdlc_la-preopen.Plo make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /bin/sh ./libtool --tag=CC --mode=link mpicc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -no-undefined -dlpreopen dlopen.la -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libltdlc.la loaders/libltdlc_la-preopen.lo libltdlc_la-lt__alloc.lo libltdlc_la-lt_dlloader.lo libltdlc_la-lt_error.lo libltdlc_la-ltdl.lo libltdlc_la-slist.lo lt__strl.lo libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT libtool: link: rm -f ".libs/libltdlc.nmI" libtool: link: (cd .libs && mpicc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -fno-builtin -fPIC -DPIC "libltdlcS.c") libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/libltdlc.nmS" ".libs/libltdlc.nmT" ".libs/libltdlc.nmI" libtool: link: (cd .libs/libltdlc.lax/dlopen.a && ar x "/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl/./.libs/dlopen.a") libtool: link: ar cru .libs/libltdlc.a loaders/.libs/libltdlc_la-preopen.o .libs/libltdlc_la-lt__alloc.o .libs/libltdlc_la-lt_dlloader.o .libs/libltdlc_la-lt_error.o .libs/libltdlc_la-ltdl.o .libs/libltdlc_la-slist.o .libs/lt__strl.o .libs/libltdlcS.o .libs/libltdlc.lax/dlopen.a/dlopen.o libtool: link: ranlib .libs/libltdlc.a libtool: link: rm -fr .libs/libltdlc.lax libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' Making all in neurosim Making all in . make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' depbase=`echo connection_generator_V2_0.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator_V2_0.lo -MD -MP -MF $depbase.Tpo -c -o connection_generator_V2_0.lo connection_generator_V2_0.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator_V2_0.lo -MD -MP -MF .deps/connection_generator_V2_0.Tpo -c connection_generator_V2_0.cpp -fPIC -DPIC -o .libs/connection_generator_V2_0.o In file included from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:277, from /usr/include/openmpi-x86_64/mpi.h:2887, from connection_generator_V2_0.h:33, from connection_generator_V2_0.cpp:23: /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h: In member function 'virtual void MPI::Op::Init(void (*)(const void*, void*, int, const MPI::Datatype&), bool)': /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h:121:25: warning: cast between incompatible function types from 'void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 121 | (void)MPI_Op_create((MPI_User_function*) ompi_mpi_cxx_op_intercept, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h:123:38: warning: cast between incompatible function types from 'void (*)(const void*, void*, int, const MPI::Datatype&)' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 123 | ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func); | ^~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' depbase=`echo version.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF $depbase.Tpo -c -o version.lo version.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c -fPIC -DPIC -o .libs/version.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' depbase=`echo connection_generator.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator.lo -MD -MP -MF $depbase.Tpo -c -o connection_generator.lo connection_generator.cpp &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I.. -I../libltdl -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT connection_generator.lo -MD -MP -MF .deps/connection_generator.Tpo -c connection_generator.cpp -fPIC -DPIC -o .libs/connection_generator.o make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' In file included from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:277, from /usr/include/openmpi-x86_64/mpi.h:2887, from ../neurosim/connection_generator_V2_0.h:33, from connection_generator.h:26, from connection_generator.cpp:23: /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h: In member function 'virtual void MPI::Op::Init(void (*)(const void*, void*, int, const MPI::Datatype&), bool)': /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h:121:25: warning: cast between incompatible function types from 'void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 121 | (void)MPI_Op_create((MPI_User_function*) ompi_mpi_cxx_op_intercept, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h:123:38: warning: cast between incompatible function types from 'void (*)(const void*, void*, int, const MPI::Datatype&)' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 123 | ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func); | ^~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o libneurosim.la -rpath /usr/lib64/openmpi/lib connection_generator.lo connection_generator_V2_0.lo version.lo ../libltdl/libltdlc.la libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/11/crtbeginS.o .libs/connection_generator.o .libs/connection_generator_V2_0.o .libs/version.o -Wl,--whole-archive ../libltdl/.libs/libltdlc.a -Wl,--no-whole-archive -ldl -L/usr/lib64/openmpi/lib -L/usr/lib/gcc/x86_64-redhat-linux/11 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/11/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crtn.o -g -O3 -O2 -flto=auto -g -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-soname -Wl,libneurosim.so.0 -o .libs/libneurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libneurosim.so.0" && ln -s "libneurosim.so.0.0.0" "libneurosim.so.0") libtool: link: (cd ".libs" && rm -f "libneurosim.so" && ln -s "libneurosim.so.0.0.0" "libneurosim.so") libtool: link: ( cd ".libs" && rm -f "libneurosim.la" && ln -s "../libneurosim.la" "libneurosim.la" ) make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' Making all in examples connection_generator.cpp:109:8: warning: type 'struct CGImplementation' violates the C++ One Definition Rule [-Wodr] 109 | struct CGImplementation { | ^ connection_generator_V2_0.cpp:137:8: note: a different type is defined in another translation unit 137 | struct CGImplementation { | ^ connection_generator.cpp:119:15: note: the first difference of corresponding definitions is field 'CGFromXML' 119 | ParseCGFunc CGFromXML; | ^ connection_generator_V2_0.cpp:147:27: note: a field of same name but different type is defined in another translation unit 147 | CGEN::V2_0::ParseCGFunc CGFromXML; | ^ connection_generator.cpp:109:8: note: type 'struct CGImplementation' itself violates the C++ One Definition Rule 109 | struct CGImplementation { | ^ connection_generator_V2_0.cpp:137:8: note: the incompatible type is defined here 137 | struct CGImplementation { | ^ connection_generator.cpp:109:8: note: type 'struct CGImplementation' itself violates the C++ One Definition Rule 109 | struct CGImplementation { | ^ connection_generator_V2_0.cpp:137:8: note: the incompatible type is defined here 137 | struct CGImplementation { | ^ ../libltdl/.libs/libltdlcS.c:27:12: warning: type of 'dlopen_LTX_get_vtable' does not match original declaration [-Wlto-type-mismatch] ../libltdl/loaders/dlopen.c:61:1: note: return value type mismatch 61 | get_vtable (lt_user_data loader_data) | ^ ../libltdl/loaders/dlopen.c:61:1: note: 'dlopen_LTX_get_vtable' was previously declared here ../libltdl/loaders/dlopen.c:61:1: note: code may be misoptimized unless '-fno-strict-aliasing' is used make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../.. -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT simulator-model.o -MD -MP -MF .deps/simulator-model.Tpo -c -o simulator-model.o simulator-model.cpp mv -f .deps/simulator-model.Tpo .deps/simulator-model.Po make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../.. -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT runiter1.o -MD -MP -MF .deps/runiter1.Tpo -c -o runiter1.o runiter1.cpp mv -f .deps/runiter1.Tpo .deps/runiter1.Po In file included from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:277, from /usr/include/openmpi-x86_64/mpi.h:2887, from ../../neurosim/connection_generator_V2_0.h:33, from ../../neurosim/connection_generator.h:26, from genex1.h:24, from runiter1.cpp:24: /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h: In member function 'virtual void MPI::Op::Init(void (*)(const void*, void*, int, const MPI::Datatype&), bool)': /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h:121:25: warning: cast between incompatible function types from 'void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 121 | (void)MPI_Op_create((MPI_User_function*) ompi_mpi_cxx_op_intercept, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h:123:38: warning: cast between incompatible function types from 'void (*)(const void*, void*, int, const MPI::Datatype&)' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 123 | ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func); | ^~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' mpicxx -DHAVE_CONFIG_H -I. -I../.. -I../.. -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -MT runiter2.o -MD -MP -MF .deps/runiter2.Tpo -c -o runiter2.o runiter2.cpp mv -f .deps/runiter2.Tpo .deps/runiter2.Po make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' In file included from /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/mpicxx.h:277, from /usr/include/openmpi-x86_64/mpi.h:2887, from ../../neurosim/connection_generator_V2_0.h:33, from ../../neurosim/connection_generator.h:26, from genex2.h:26, from runiter2.cpp:24: /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h: In member function 'virtual void MPI::Op::Init(void (*)(const void*, void*, int, const MPI::Datatype&), bool)': /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h:121:25: warning: cast between incompatible function types from 'void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 121 | (void)MPI_Op_create((MPI_User_function*) ompi_mpi_cxx_op_intercept, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/openmpi-x86_64/openmpi/ompi/mpi/cxx/op_inln.h:123:38: warning: cast between incompatible function types from 'void (*)(const void*, void*, int, const MPI::Datatype&)' to 'void (*)(void*, void*, int*, ompi_datatype_t**)' [-Wcast-function-type] 123 | ompi_op_set_cxx_callback(mpi_op, (MPI_User_function*) func); | ^~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' /bin/sh ../../libtool --tag=CXX --mode=link mpicxx -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o runiter1 runiter1.o simulator-model.o ../../neurosim/libneurosim.la libtool: link: mpicxx -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o .libs/runiter1 runiter1.o simulator-model.o ../../neurosim/.libs/libneurosim.so -ldl -Wl,-rpath -Wl,/usr/lib64/openmpi/lib make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' /bin/sh ../../libtool --tag=CXX --mode=link mpicxx -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o runiter2 runiter2.o simulator-model.o ../../neurosim/libneurosim.la libtool: link: mpicxx -W -Wall -pedantic -Wno-long-long -g -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -o .libs/runiter2 runiter2.o simulator-model.o ../../neurosim/.libs/libneurosim.so -ldl -Wl,-rpath -Wl,/usr/lib64/openmpi/lib make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' Making all in libpyneurosim make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I./../neurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c -o libpy3neurosim_la-pyneurosim.lo `test -f 'pyneurosim.cpp' || echo './'`pyneurosim.cpp libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I./../neurosim/conngen -MT libpy3neurosim_la-pyneurosim.lo -MD -MP -MF .deps/libpy3neurosim_la-pyneurosim.Tpo -c pyneurosim.cpp -fPIC -DPIC -o .libs/libpy3neurosim_la-pyneurosim.o mv -f .deps/libpy3neurosim_la-pyneurosim.Tpo .deps/libpy3neurosim_la-pyneurosim.Plo make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libpyneurosim' /bin/sh ../libtool --tag=CXX --mode=link mpicxx -I/usr/include/python3.9 -I./../neurosim/conngen ../neurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64/openmpi/lib libpy3neurosim_la-pyneurosim.lo libtool: link: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/11/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/.libs -Wl,-rpath -Wl,/usr/lib64/openmpi/lib ../neurosim/.libs/libneurosim.so -ldl -L/usr/lib64/openmpi/lib -L/usr/lib/gcc/x86_64-redhat-linux/11 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/11/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so.0 -o .libs/libpy3neurosim.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libpy3neurosim.so.0" && ln -s "libpy3neurosim.so.0.0.0" "libpy3neurosim.so.0") libtool: link: (cd ".libs" && rm -f "libpy3neurosim.so" && ln -s "libpy3neurosim.so.0.0.0" "libpy3neurosim.so") libtool: link: ( cd ".libs" && rm -f "libpy3neurosim.la" && ln -s "../libpy3neurosim.la" "libpy3neurosim.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libpyneurosim' + popd ~/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 46 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.zZFS2j + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 ++ dirname /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 + cd libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + MPI_COMPILE_TYPE= + PYTHON_VERSION=3 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 'INSTALL=/usr/bin/install -p' -C libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 STRIP=/bin/true make: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2' Making install in libltdl make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' /usr/bin/make install-am make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl' Making install in neurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' Making install in . make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64' /bin/sh ../libtool --mode=install /usr/bin/install -p libneurosim.la '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64' libtool: install: /usr/bin/install -p .libs/libneurosim.so.0.0.0 /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/libneurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64 && { ln -s -f libneurosim.so.0.0.0 libneurosim.so.0 || { rm -f libneurosim.so.0 && ln -s libneurosim.so.0.0.0 libneurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64 && { ln -s -f libneurosim.so.0.0.0 libneurosim.so || { rm -f libneurosim.so && ln -s libneurosim.so.0.0.0 libneurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libneurosim.lai /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/libneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/neurosim' /usr/bin/install -p -m 644 ../config.h connection_generator.h connection_generator_V2_0.h version.h '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/neurosim' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' Making install in examples make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim/examples' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/neurosim' Making install in libpyneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libpyneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64' /bin/sh ../libtool --mode=install /usr/bin/install -p libpy3neurosim.la '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64' libtool: warning: relinking 'libpy3neurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libtool" --tag CXX --mode=relink g++ -I/usr/include/python3.9 -I./../neurosim/conngen ../neurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64 libpy3neurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/11/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -L/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64 -L/usr/lib64 -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/11 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/11/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so.0 -o .libs/libpy3neurosim.so.0.0.0 libtool: install: /usr/bin/install -p .libs/libpy3neurosim.so.0.0.0T /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/libpy3neurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64 && { ln -s -f libpy3neurosim.so.0.0.0 libpy3neurosim.so.0 || { rm -f libpy3neurosim.so.0 && ln -s libpy3neurosim.so.0.0.0 libpy3neurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64 && { ln -s -f libpy3neurosim.so.0.0.0 libpy3neurosim.so || { rm -f libpy3neurosim.so && ln -s libpy3neurosim.so.0.0.0 libpy3neurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libpy3neurosim.lai /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/libpy3neurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libpyneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libpyneurosim' make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2' make: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2' + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 35622 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE + module load mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/mpich-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/mpich-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1' ++ export __LMOD_REF_COUNT_MODULEPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ MPI_COMPILER=mpich-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/mpich-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/mpich-x86_64 ++ export MPI_MAN ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/mpich-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export 'CFLAGS= -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS=' -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + MPI_TYPE=mpich + MPI_COMPILE_TYPE=-mpich + PYTHON_VERSION=3 + PY_VERSION=3.9 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 'INSTALL=/usr/bin/install -p' -C libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich STRIP=/bin/true make: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich' Making install in libltdl make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' /usr/bin/make install-am make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl' Making install in neurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' Making install in . make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib' /bin/sh ../libtool --mode=install /usr/bin/install -p libneurosim.la '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib' libtool: install: /usr/bin/install -p .libs/libneurosim.so.0.0.0 /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib/libneurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so.0 || { rm -f libneurosim.so.0 && ln -s libneurosim.so.0.0.0 libneurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so || { rm -f libneurosim.so && ln -s libneurosim.so.0.0.0 libneurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libneurosim.lai /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib/libneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/mpich/lib' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/mpich-x86_64/neurosim' /usr/bin/install -p -m 644 ../config.h connection_generator.h connection_generator_V2_0.h version.h '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/mpich-x86_64/neurosim' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' Making install in examples make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim/examples' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/neurosim' Making install in libpyneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libpyneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib' /bin/sh ../libtool --mode=install /usr/bin/install -p libpy3neurosim.la '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib' libtool: warning: relinking 'libpy3neurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libtool" --tag CXX --mode=relink mpicxx -I/usr/include/python3.9 -I./../neurosim/conngen ../neurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64/mpich/lib libpy3neurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64) libtool: relink: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/11/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/usr/lib64/mpich/lib -L/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib -L/usr/lib64/mpich/lib -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/11 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../.. -lmpicxx -lmpi -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/11/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so.0 -o .libs/libpy3neurosim.so.0.0.0 libtool: install: /usr/bin/install -p .libs/libpy3neurosim.so.0.0.0T /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib/libpy3neurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib && { ln -s -f libpy3neurosim.so.0.0.0 libpy3neurosim.so.0 || { rm -f libpy3neurosim.so.0 && ln -s libpy3neurosim.so.0.0.0 libpy3neurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib && { ln -s -f libpy3neurosim.so.0.0.0 libpy3neurosim.so || { rm -f libpy3neurosim.so && ln -s libpy3neurosim.so.0.0.0 libpy3neurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libpy3neurosim.lai /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib/libpy3neurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/mpich/lib' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/mpich-x86_64/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/mpich-x86_64/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libpyneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libpyneurosim' make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich' make: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich' + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 35622 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE + module unload mpi/mpich-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_PYTHON_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 35622 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE + module load mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-x86_64 + eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-x86_64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-x86_64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-x86_64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-x86_64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-x86_64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-x86_64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1 ++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT_LOADEDMODULES ++ LOADEDMODULES=mpi/openmpi-x86_64 ++ export LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-x86_64:1;/usr/share/lmod/lmod/share/man:1' ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=:/usr/share/man/openmpi-x86_64:/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ MPI_COMPILER=openmpi-x86_64 ++ export MPI_COMPILER ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_INCLUDE=/usr/include/openmpi-x86_64 ++ export MPI_INCLUDE ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ MPI_MAN=/usr/share/man/openmpi-x86_64 ++ export MPI_MAN ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-x86_64 ++ export MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64:1 ++ export __LMOD_REF_COUNT__LMFILES_ ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64 ++ export _LMFILES_ ++ _ModuleTable001_=X01vZHVsZVRhYmxlXz17WyJNVHZlcnNpb24iXT0zLFsiY19yZWJ1aWxkVGltZSJdPWZhbHNlLFsiY19zaG9ydFRpbWUiXT1mYWxzZSxkZXB0aFQ9e30sZmFtaWx5PXt9LG1UPXttcGk9e1siZm4iXT0iL3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9tcGkvb3Blbm1waS14ODZfNjQiLFsiZnVsbE5hbWUiXT0ibXBpL29wZW5tcGkteDg2XzY0IixbImxvYWRPcmRlciJdPTEscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MCxbInN0YXR1cyJdPSJhY3RpdmUiLFsidXNlck5hbWUiXT0ibXBpL29wZW5tcGkteDg2XzY0Iix9LH0sbXBhdGhBPXsiL2V0Yy9tb2R1bGVmaWxlcyIsIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMiLCIvdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4IiwiL3Vzci9zaGFy ++ export _ModuleTable001_ ++ _ModuleTable002_=ZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ== ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + export OMPI_MCA_rmaps_base_oversubscribe=1 + OMPI_MCA_rmaps_base_oversubscribe=1 + MPI_TYPE=openmpi + MPI_COMPILE_TYPE=-openmpi make: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi' Making install in libltdl + PYTHON_VERSION=3 + PY_VERSION=3.9 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 'INSTALL=/usr/bin/install -p' -C libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi STRIP=/bin/true make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' /usr/bin/make install-am make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl' Making install in neurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' Making install in . make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib' /bin/sh ../libtool --mode=install /usr/bin/install -p libneurosim.la '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib' libtool: install: /usr/bin/install -p .libs/libneurosim.so.0.0.0 /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib/libneurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so.0 || { rm -f libneurosim.so.0 && ln -s libneurosim.so.0.0.0 libneurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib && { ln -s -f libneurosim.so.0.0.0 libneurosim.so || { rm -f libneurosim.so && ln -s libneurosim.so.0.0.0 libneurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libneurosim.lai /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib/libneurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/openmpi/lib' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/openmpi-x86_64/neurosim' /usr/bin/install -p -m 644 ../config.h connection_generator.h connection_generator_V2_0.h version.h '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/openmpi-x86_64/neurosim' make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' Making install in examples make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' make[3]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim/examples' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/neurosim' Making install in libpyneurosim make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libpyneurosim' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libpyneurosim' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib' /bin/sh ../libtool --mode=install /usr/bin/install -p libpy3neurosim.la '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib' libtool: warning: relinking 'libpy3neurosim.la' libtool: install: (cd /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libpyneurosim; /bin/sh "/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libtool" --tag CXX --mode=relink mpicxx -I/usr/include/python3.9 -I./../neurosim/conngen ../neurosim/libneurosim.la -o libpy3neurosim.la -rpath /usr/lib64/openmpi/lib libpy3neurosim_la-pyneurosim.lo -inst-prefix-dir /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64) libtool: relink: mpicxx -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/11/crtbeginS.o .libs/libpy3neurosim_la-pyneurosim.o -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -L/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib -lneurosim -ldl -L/usr/lib/gcc/x86_64-redhat-linux/11 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/11/../../.. -lmpi_cxx -lmpi -lstdc++ -lm -lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/11/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/11/../../../../lib64/crtn.o -Wl,-soname -Wl,libpy3neurosim.so.0 -o .libs/libpy3neurosim.so.0.0.0 libtool: install: /usr/bin/install -p .libs/libpy3neurosim.so.0.0.0T /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib/libpy3neurosim.so.0.0.0 libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib && { ln -s -f libpy3neurosim.so.0.0.0 libpy3neurosim.so.0 || { rm -f libpy3neurosim.so.0 && ln -s libpy3neurosim.so.0.0.0 libpy3neurosim.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib && { ln -s -f libpy3neurosim.so.0.0.0 libpy3neurosim.so || { rm -f libpy3neurosim.so && ln -s libpy3neurosim.so.0.0.0 libpy3neurosim.so; }; }) libtool: install: /usr/bin/install -p .libs/libpy3neurosim.lai /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib/libpy3neurosim.la libtool: warning: remember to run 'libtool --finish /usr/lib64/openmpi/lib' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/openmpi-x86_64/neurosim' /usr/bin/install -p -m 644 pyneurosim.h '/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/include/openmpi-x86_64/neurosim' make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libpyneurosim' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libpyneurosim' make[1]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi' make[2]: Entering directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi' make[1]: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi' make: Leaving directory '/builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi' + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec +++ /usr/bin/ps -p 35622 -ocomm= ++ my_shell=sh +++ /usr/bin/expr sh : '-*\(.*\)' ++ my_shell=sh +++ /usr/bin/basename sh ++ my_shell=sh ++ '[' -f /usr/share/lmod/lmod/init/sh ']' ++ . /usr/share/lmod/lmod/init/sh +++ LMOD_ROOT=/usr/share/lmod +++ LMOD_PKG=/usr/share/lmod/lmod +++ LMOD_DIR=/usr/share/lmod/lmod/libexec/ +++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod +++ MODULESHOME=/usr/share/lmod/lmod +++ export LMOD_CMD +++ export LMOD_PKG +++ export LMOD_DIR +++ export MODULESHOME +++ export LMOD_DIR ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE + module unload mpi/openmpi-x86_64 ++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-x86_64 + eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/builddir/.local/bin:1\;/builddir/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;' ++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH ++ unset LD_LIBRARY_PATH ++ unset __LMOD_REF_COUNT_LOADEDMODULES ++ unset LOADEDMODULES ++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1 ++ export __LMOD_REF_COUNT_MANPATH ++ MANPATH=/usr/share/lmod/lmod/share/man ++ export MANPATH ++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ++ export MODULEPATH ++ unset MPI_BIN ++ unset MPI_COMPILER ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset MPI_INCLUDE ++ unset MPI_LIB ++ unset MPI_MAN ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __LMOD_REF_COUNT_PATH='/builddir/.local/bin:1;/builddir/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1' ++ export __LMOD_REF_COUNT_PATH ++ PATH=/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1' ++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset __LMOD_REF_COUNT__LMFILES_ ++ unset _LMFILES_ ++ _ModuleTable001_=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 ++ export _ModuleTable001_ ++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0= ++ export _ModuleTable002_ ++ _ModuleTable_Sz_=2 ++ export _ModuleTable_Sz_ + find /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 -name '*.la' -exec rm -f '{}' ';' + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 1.2.0-2.20210110.gitafc003f.fc34 --unique-debug-suffix -1.2.0-2.20210110.gitafc003f.fc34.x86_64 --unique-debug-src-base libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/libneurosim.so.0.0.0 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/libpy3neurosim.so.0.0.0 extracting debug info from /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/libpy3neurosim.so.0.0.0 extracting debug info from /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/libneurosim.so.0.0.0 gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/libpy3neurosim.so.0.0.0 gdb-add-index: [Was there no debuginfo? Was there already an index?] explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib/libneurosim.so.0.0.0 extracting debug info from /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib/libneurosim.so.0.0.0 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib/libpy3neurosim.so.0.0.0 extracting debug info from /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib/libpy3neurosim.so.0.0.0 gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/mpich/lib/libpy3neurosim.so.0.0.0 gdb-add-index: [Was there no debuginfo? Was there already an index?] explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib/libneurosim.so.0.0.0 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib/libpy3neurosim.so.0.0.0 extracting debug info from /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib/libneurosim.so.0.0.0 extracting debug info from /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib/libpy3neurosim.so.0.0.0 gdb-add-index: No index was created for /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/lib64/openmpi/lib/libpy3neurosim.so.0.0.0 gdb-add-index: [Was there no debuginfo? Was there already an index?] original debug info size: 2612kB, size after compression: 2068kB /usr/lib/rpm/sepdebugcrcfix: Updated 3 CRC32s, 3 CRC32s did match. cpio: libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-mpich/libltdl/.libs/libltdlcS.c: Cannot stat: No such file or directory cpio: libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2-openmpi/libltdl/.libs/libltdlcS.c: Cannot stat: No such file or directory cpio: libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2/libltdl/.libs/libltdlcS.c: Cannot stat: No such file or directory 867 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Processing files: libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Provides: libneurosim = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim.so.0()(64bit) libpy3neurosim.so.0()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libneurosim.so.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: libneurosim-devel-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Provides: libneurosim-devel = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim-devel(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libneurosim.so.0()(64bit) libpy3neurosim.so.0()(64bit) Processing files: libneurosim-common-1.2.0-2.20210110.gitafc003f.fc34.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.6Lh9vQ + umask 022 + cd /builddir/build/BUILD + cd libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + DOCDIR=/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/share/doc/libneurosim-common + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/share/doc/libneurosim-common + cp -pr README.md /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/share/doc/libneurosim-common + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.dA0DpG + umask 022 + cd /builddir/build/BUILD + cd libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + LICENSEDIR=/builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/share/licenses/libneurosim-common + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/share/licenses/libneurosim-common + cp -pr COPYING /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64/usr/share/licenses/libneurosim-common + RPM_EC=0 ++ jobs -p + exit 0 Provides: libneurosim-common = 1.2.0-2.20210110.gitafc003f.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libneurosim-openmpi-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Provides: libneurosim-openmpi = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim-openmpi(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim.so.0()(64bit)(openmpi-x86_64) libpy3neurosim.so.0()(64bit)(openmpi-x86_64) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libmpi_cxx.so.40()(64bit)(openmpi-x86_64) libneurosim.so.0()(64bit)(openmpi-x86_64) libpthread.so.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: libneurosim-openmpi-devel-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Provides: libneurosim-openmpi-devel = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim-openmpi-devel(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libneurosim.so.0()(64bit)(openmpi-x86_64) libpy3neurosim.so.0()(64bit)(openmpi-x86_64) Processing files: libneurosim-mpich-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Provides: libneurosim-mpich = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim-mpich(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim.so.0()(64bit)(mpich-x86_64) libpy3neurosim.so.0()(64bit)(mpich-x86_64) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libmpicxx.so.12()(64bit)(mpich-x86_64) libneurosim.so.0()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: libneurosim-mpich-devel-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Provides: libneurosim-mpich-devel = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim-mpich-devel(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libneurosim.so.0()(64bit)(mpich-x86_64) libpy3neurosim.so.0()(64bit)(mpich-x86_64) Processing files: libneurosim-debugsource-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Provides: libneurosim-debugsource = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim-debugsource(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libneurosim-debuginfo-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Provides: debuginfo(build-id) = 33cdfefe40a2317eb64558bb7afaeea1b2544738 debuginfo(build-id) = b096e29c4792bbba5e6b176df4e9e813ae295a80 libneurosim-debuginfo = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim-debuginfo(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 Processing files: libneurosim-openmpi-debuginfo-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Provides: debuginfo(build-id) = 9a29c6c61fb551b1e103fb33bd2aeaded1738d1b debuginfo(build-id) = bbda8a2fe6665c92ca2f23fb986895d0b953cb18 libneurosim-openmpi-debuginfo = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim-openmpi-debuginfo(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 Processing files: libneurosim-mpich-debuginfo-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Provides: debuginfo(build-id) = 2ed78329e60f46ae3f0352dce523d91de3f66f56 debuginfo(build-id) = 9a3e9de9e830341cd8a3184abf2e53b96e3a2530 libneurosim-mpich-debuginfo = 1.2.0-2.20210110.gitafc003f.fc34 libneurosim-mpich-debuginfo(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libneurosim-debugsource(x86-64) = 1.2.0-2.20210110.gitafc003f.fc34 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 Wrote: /builddir/build/RPMS/libneurosim-openmpi-debuginfo-1.2.0-2.20210110.gitafc003f.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-debuginfo-1.2.0-2.20210110.gitafc003f.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-debugsource-1.2.0-2.20210110.gitafc003f.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-mpich-debuginfo-1.2.0-2.20210110.gitafc003f.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-mpich-1.2.0-2.20210110.gitafc003f.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-openmpi-1.2.0-2.20210110.gitafc003f.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-common-1.2.0-2.20210110.gitafc003f.fc34.noarch.rpm Wrote: /builddir/build/RPMS/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-devel-1.2.0-2.20210110.gitafc003f.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-openmpi-devel-1.2.0-2.20210110.gitafc003f.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/libneurosim-mpich-devel-1.2.0-2.20210110.gitafc003f.fc34.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.MxHWJq + umask 022 + cd /builddir/build/BUILD + cd libneurosim-afc003fede96be54ebcd32f5cbf32eb570ede1b2 + /usr/bin/rm -rf /builddir/build/BUILDROOT/libneurosim-1.2.0-2.20210110.gitafc003f.fc34.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0