Warning: Permanently added '150.239.212.28' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6574725-fedora-rawhide-s390x --chroot fedora-rawhide-s390x Version: 0.69 PID: 6574 Logging PID: 6576 Task: {'appstream': False, 'background': False, 'build_id': 6574725, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-s390x', 'enable_net': False, 'fedora_review': False, 'git_hash': '4bd8509dfac8118253811cf8a28d020de1ff53ab', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/orion/pmix-4.2/bout++', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'bout++', 'package_version': '5.0.0-11', 'project_dirname': 'pmix-4.2', 'project_name': 'pmix-4.2', 'project_owner': 'orion', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/orion/pmix-4.2/fedora-rawhide-s390x/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'orion/pmix-4.2--orion', 'source_json': {}, 'source_type': None, 'submitter': 'orion', 'tags': [], 'task_id': '6574725-fedora-rawhide-s390x', 'timeout': 96000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/orion/pmix-4.2/bout++ /var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++ --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/orion/pmix-4.2/bout++', '/var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++'... Running: git checkout 4bd8509dfac8118253811cf8a28d020de1ff53ab -- cmd: ['git', 'checkout', '4bd8509dfac8118253811cf8a28d020de1ff53ab', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++ rc: 0 stdout: stderr: Note: switching to '4bd8509dfac8118253811cf8a28d020de1ff53ab'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 4bd8509 automatic import of bout++ Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++ rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading BOUT++-v5.0.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o BOUT++-v5.0.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/orion/pmix-4.2/bout++/BOUT++-v5.0.0.tar.gz/md5/a7d6a9f9f2334e1956b9ba0e4430e0ae/BOUT++-v5.0.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 40.8M 100 40.8M 0 0 190M 0 --:--:-- --:--:-- --:--:-- 190M INFO: Reading stdout from command: md5sum BOUT++-v5.0.0.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=96000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1698439533.476517 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.2 starting (python version = 3.11.3, NVR = mock-5.2-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1698439533.476517 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++/bout++.spec) Config(fedora-rawhide-s390x) Start: clean chroot Finish: clean chroot Mock Version: 5.2 INFO: Mock Version: 5.2 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1698439533.476517/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-s390x-bootstrap-1698439533.476517/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/93f804b0d997331a5eb05a0be22fd53a2b8ed35c68388104b350a49bc64854ab/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/93f804b0d997331a5eb05a0be22fd53a2b8ed35c68388104b350a49bc64854ab/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 445 kB/s | 2.2 MB 00:05 fedora 9.8 MB/s | 64 MB 00:06 Last metadata expiration check: 0:00:03 ago on Fri Oct 27 20:46:10 2023. Package python3-dnf-4.18.0-1.fc40.noarch is already installed. Dependencies resolved. ================================================================================ Package Arch Version Repository Size ================================================================================ Installing: python3-dnf-plugins-core noarch 4.4.3-1.fc40 fedora 317 k Installing dependencies: dbus-libs s390x 1:1.14.10-1.fc40 fedora 159 k python3-dateutil noarch 1:2.8.2-10.fc39 fedora 355 k python3-dbus s390x 1.3.2-4.fc39 fedora 157 k python3-distro noarch 1.8.0-6.fc39 fedora 49 k python3-six noarch 1.16.0-12.fc39 fedora 41 k python3-systemd s390x 235-5.fc39 fedora 106 k Transaction Summary ================================================================================ Install 7 Packages Total download size: 1.2 M Installed size: 3.6 M Downloading Packages: (1/7): dbus-libs-1.14.10-1.fc40.s390x.rpm 868 kB/s | 159 kB 00:00 (2/7): python3-dbus-1.3.2-4.fc39.s390x.rpm 772 kB/s | 157 kB 00:00 (3/7): python3-distro-1.8.0-6.fc39.noarch.rpm 1.2 MB/s | 49 kB 00:00 (4/7): python3-dateutil-2.8.2-10.fc39.noarch.rp 70 kB/s | 355 kB 00:05 (5/7): python3-dnf-plugins-core-4.4.3-1.fc40.no 66 kB/s | 317 kB 00:04 (6/7): python3-six-1.16.0-12.fc39.noarch.rpm 8.5 kB/s | 41 kB 00:04 (7/7): python3-systemd-235-5.fc39.s390x.rpm 741 kB/s | 106 kB 00:00 -------------------------------------------------------------------------------- Total 218 kB/s | 1.2 MB 00:05 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : python3-systemd-235-5.fc39.s390x 1/7 Installing : python3-six-1.16.0-12.fc39.noarch 2/7 Installing : python3-dateutil-1:2.8.2-10.fc39.noarch 3/7 Installing : python3-distro-1.8.0-6.fc39.noarch 4/7 Installing : dbus-libs-1:1.14.10-1.fc40.s390x 5/7 Installing : python3-dbus-1.3.2-4.fc39.s390x 6/7 Installing : python3-dnf-plugins-core-4.4.3-1.fc40.noarch 7/7 Running scriptlet: python3-dnf-plugins-core-4.4.3-1.fc40.noarch 7/7 Installed: dbus-libs-1:1.14.10-1.fc40.s390x python3-dateutil-1:2.8.2-10.fc39.noarch python3-dbus-1.3.2-4.fc39.s390x python3-distro-1.8.0-6.fc39.noarch python3-dnf-plugins-core-4.4.3-1.fc40.noarch python3-six-1.16.0-12.fc39.noarch python3-systemd-235-5.fc39.s390x Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-1698439533.476517/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 534 kB/s | 2.2 MB 00:04 fedora 5.7 MB/s | 64 MB 00:11 Last metadata expiration check: 0:00:01 ago on Fri Oct 27 20:47:02 2023. Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash s390x 5.2.15-5.fc39 fedora 1.8 M bzip2 s390x 1.0.8-16.fc39 fedora 53 k coreutils s390x 9.4-1.fc40 fedora 1.2 M cpio s390x 2.14-4.fc39 fedora 283 k diffutils s390x 3.10-3.fc39 fedora 407 k fedora-release-common noarch 40-0.14 fedora 19 k findutils s390x 1:4.9.0-6.fc40 fedora 497 k gawk s390x 5.2.2-2.fc39 fedora 1.1 M glibc-minimal-langpack s390x 2.38.9000-16.fc40 fedora 78 k grep s390x 3.11-5.fc40 fedora 305 k gzip s390x 1.12-6.fc39 fedora 173 k info s390x 7.1-1.fc40 fedora 195 k patch s390x 2.7.6-22.fc39 fedora 134 k redhat-rpm-config noarch 269-1.fc40 fedora 81 k rpm-build s390x 4.19.0-1.fc40 fedora 78 k sed s390x 4.8-14.fc39 fedora 309 k shadow-utils s390x 2:4.14.0-2.fc40 fedora 1.3 M tar s390x 2:1.35-2.fc40 fedora 874 k unzip s390x 6.0-62.fc39 fedora 194 k util-linux s390x 2.39.2-1.fc40 fedora 1.1 M which s390x 2.21-40.fc39 fedora 43 k xz s390x 5.4.4-1.fc39 fedora 557 k Installing dependencies: alternatives s390x 1.25-1.fc39 fedora 39 k ansible-srpm-macros noarch 1-11.fc39 fedora 21 k audit-libs s390x 3.1.2-4.fc40 fedora 121 k authselect s390x 1.4.3-1.fc40 fedora 149 k authselect-libs s390x 1.4.3-1.fc40 fedora 248 k basesystem noarch 11-18.fc39 fedora 7.2 k binutils s390x 2.41-8.fc40 fedora 5.9 M binutils-gold s390x 2.41-8.fc40 fedora 992 k bzip2-libs s390x 1.0.8-16.fc39 fedora 46 k ca-certificates noarch 2023.2.62_v7.0.401-4.fc40 fedora 863 k coreutils-common s390x 9.4-1.fc40 fedora 2.1 M cracklib s390x 2.9.11-2.fc39 fedora 94 k crypto-policies noarch 20230920-1.git570ea89.fc40 fedora 99 k curl s390x 8.4.0-1.fc40 fedora 362 k cyrus-sasl-lib s390x 2.1.28-11.fc39 fedora 819 k debugedit s390x 5.0-10.fc39 fedora 81 k dwz s390x 0.15-3.fc39 fedora 144 k ed s390x 1.19-4.fc39 fedora 80 k efi-srpm-macros noarch 5-9.fc39 fedora 22 k elfutils s390x 0.189-6.fc40 fedora 560 k elfutils-debuginfod-client s390x 0.189-6.fc40 fedora 38 k elfutils-default-yama-scope noarch 0.189-6.fc40 fedora 13 k elfutils-libelf s390x 0.189-6.fc40 fedora 200 k elfutils-libs s390x 0.189-6.fc40 fedora 275 k fedora-gpg-keys noarch 40-0.2 fedora 130 k fedora-release noarch 40-0.14 fedora 8.8 k fedora-release-identity-basic noarch 40-0.14 fedora 9.6 k fedora-repos noarch 40-0.2 fedora 9.3 k fedora-repos-rawhide noarch 40-0.2 fedora 8.9 k file s390x 5.45-1.fc40 fedora 49 k file-libs s390x 5.45-1.fc40 fedora 769 k filesystem s390x 3.18-6.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k forge-srpm-macros noarch 0.1.0-1.fc40 fedora 18 k fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k gdb-minimal s390x 13.2-11.fc40 fedora 4.0 M gdbm s390x 1:1.23-4.fc39 fedora 156 k gdbm-libs s390x 1:1.23-4.fc39 fedora 58 k ghc-srpm-macros noarch 1.6.1-3.fc40 fedora 8.1 k glibc s390x 2.38.9000-16.fc40 fedora 1.9 M glibc-common s390x 2.38.9000-16.fc40 fedora 377 k glibc-gconv-extra s390x 2.38.9000-16.fc40 fedora 1.7 M gmp s390x 1:6.2.1-5.fc39 fedora 325 k gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k go-srpm-macros noarch 3.2.0-7.fc40 fedora 27 k jansson s390x 2.13.1-7.fc39 fedora 44 k kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k keyutils-libs s390x 1.6.1-7.fc39 fedora 31 k krb5-libs s390x 1.21.2-2.fc40 fedora 780 k libacl s390x 2.3.1-10.fc40 fedora 24 k libarchive s390x 3.7.2-1.fc40 fedora 440 k libattr s390x 2.5.1-9.fc40 fedora 18 k libblkid s390x 2.39.2-1.fc40 fedora 120 k libbrotli s390x 1.1.0-1.fc40 fedora 379 k libcap s390x 2.48-7.fc39 fedora 69 k libcap-ng s390x 0.8.3-8.fc40 fedora 32 k libcom_err s390x 1.47.0-2.fc39 fedora 26 k libcurl s390x 8.4.0-1.fc40 fedora 360 k libdb-convert-util s390x 5.3.28-58.fc40 fedora 727 k libeconf s390x 0.5.2-1.fc40 fedora 32 k libevent s390x 2.1.12-9.fc39 fedora 260 k libfdisk s390x 2.39.2-1.fc40 fedora 165 k libffi s390x 3.4.4-4.fc39 fedora 36 k libgcc s390x 13.2.1-4.fc40 fedora 84 k libgomp s390x 13.2.1-4.fc40 fedora 324 k libidn2 s390x 2.3.4-3.fc39 fedora 118 k libmount s390x 2.39.2-1.fc40 fedora 158 k libnghttp2 s390x 1.57.0-2.fc40 fedora 78 k libnsl2 s390x 2.0.0-6.fc39 fedora 30 k libpkgconf s390x 1.9.5-2.fc39 fedora 38 k libpsl s390x 0.21.2-4.fc39 fedora 63 k libpwquality s390x 1.4.5-6.fc39 fedora 121 k libselinux s390x 3.5-5.fc39 fedora 91 k libsemanage s390x 3.5-4.fc39 fedora 122 k libsepol s390x 3.5-2.fc39 fedora 330 k libsigsegv s390x 2.14-5.fc39 fedora 27 k libsmartcols s390x 2.39.2-1.fc40 fedora 70 k libssh s390x 0.10.5-2.fc39 fedora 209 k libssh-config noarch 0.10.5-2.fc39 fedora 9.2 k libstdc++ s390x 13.2.1-4.fc40 fedora 950 k libtasn1 s390x 4.19.0-3.fc39 fedora 77 k libtirpc s390x 1.3.4-0.fc40 fedora 96 k libunistring s390x 1.1-5.fc40 fedora 556 k libutempter s390x 1.2.1-10.fc39 fedora 26 k libuuid s390x 2.39.2-1.fc40 fedora 28 k libverto s390x 0.3.2-6.fc39 fedora 21 k libxcrypt s390x 4.4.36-2.fc39 fedora 124 k libxml2 s390x 2.11.5-1.fc40 fedora 711 k libzstd s390x 1.5.5-4.fc39 fedora 342 k lmdb-libs s390x 0.9.31-2.fc39 fedora 64 k lua-libs s390x 5.4.6-3.fc39 fedora 142 k lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k lz4-libs s390x 1.9.4-4.fc39 fedora 81 k mpfr s390x 4.2.1-1.fc40 fedora 297 k ncurses-base noarch 6.4-8.20231001.fc40 fedora 88 k ncurses-libs s390x 6.4-8.20231001.fc40 fedora 362 k ocaml-srpm-macros noarch 9-1.fc40 fedora 9.0 k openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k openldap s390x 2.6.6-1.fc39 fedora 262 k openssl-libs s390x 1:3.1.1-4.fc40 fedora 1.9 M p11-kit s390x 0.25.1-1.fc40 fedora 533 k p11-kit-trust s390x 0.25.1-1.fc40 fedora 142 k package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k pam s390x 1.5.3-4.fc40 fedora 557 k pam-libs s390x 1.5.3-4.fc40 fedora 59 k pcre2 s390x 10.42-1.fc39.2 fedora 250 k pcre2-syntax noarch 10.42-1.fc39.2 fedora 143 k perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k pkgconf s390x 1.9.5-2.fc39 fedora 43 k pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k pkgconf-pkg-config s390x 1.9.5-2.fc39 fedora 9.6 k popt s390x 1.19-3.fc39 fedora 69 k publicsuffix-list-dafsa noarch 20230812-1.fc40 fedora 57 k pyproject-srpm-macros noarch 1.10.0-1.fc40 fedora 14 k python-srpm-macros noarch 3.12-4.fc40 fedora 25 k qt5-srpm-macros noarch 5.15.11-1.fc40 fedora 8.3 k qt6-srpm-macros noarch 6.6.0-1.fc40 fedora 8.7 k readline s390x 8.2-4.fc39 fedora 229 k rpm s390x 4.19.0-1.fc40 fedora 538 k rpm-build-libs s390x 4.19.0-1.fc40 fedora 97 k rpm-libs s390x 4.19.0-1.fc40 fedora 323 k rpm-sequoia s390x 1.5.0-1.fc40 fedora 1.0 M rust-srpm-macros noarch 25.2-2.fc40 fedora 13 k setup noarch 2.14.4-1.fc39 fedora 154 k sqlite-libs s390x 3.43.2-1.fc40 fedora 737 k systemd-libs s390x 254.5-2.fc40 fedora 696 k util-linux-core s390x 2.39.2-1.fc40 fedora 496 k xxhash-libs s390x 0.8.2-1.fc39 fedora 37 k xz-libs s390x 5.4.4-1.fc39 fedora 114 k zip s390x 3.0-39.fc40 fedora 283 k zlib s390x 1.2.13-5.fc40 fedora 101 k zstd s390x 1.5.5-4.fc39 fedora 506 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 154 Packages Total download size: 53 M Installed size: 179 M Downloading Packages: (1/154): ansible-srpm-macros-1-11.fc39.noarch.r 3.9 kB/s | 21 kB 00:05 (2/154): alternatives-1.25-1.fc39.s390x.rpm 7.2 kB/s | 39 kB 00:05 (3/154): audit-libs-3.1.2-4.fc40.s390x.rpm 22 kB/s | 121 kB 00:05 (4/154): basesystem-11-18.fc39.noarch.rpm 63 kB/s | 7.2 kB 00:00 (5/154): authselect-1.4.3-1.fc40.s390x.rpm 352 kB/s | 149 kB 00:00 (6/154): authselect-libs-1.4.3-1.fc40.s390x.rpm 482 kB/s | 248 kB 00:00 (7/154): bash-5.2.15-5.fc39.s390x.rpm 3.2 MB/s | 1.8 MB 00:00 (8/154): binutils-gold-2.41-8.fc40.s390x.rpm 2.3 MB/s | 992 kB 00:00 (9/154): bzip2-1.0.8-16.fc39.s390x.rpm 479 kB/s | 53 kB 00:00 (10/154): bzip2-libs-1.0.8-16.fc39.s390x.rpm 360 kB/s | 46 kB 00:00 (11/154): ca-certificates-2023.2.62_v7.0.401-4. 5.9 MB/s | 863 kB 00:00 (12/154): binutils-2.41-8.fc40.s390x.rpm 6.9 MB/s | 5.9 MB 00:00 (13/154): coreutils-common-9.4-1.fc40.s390x.rpm 11 MB/s | 2.1 MB 00:00 (14/154): coreutils-9.4-1.fc40.s390x.rpm 5.4 MB/s | 1.2 MB 00:00 (15/154): cpio-2.14-4.fc39.s390x.rpm 2.4 MB/s | 283 kB 00:00 (16/154): crypto-policies-20230920-1.git570ea89 879 kB/s | 99 kB 00:00 (17/154): cracklib-2.9.11-2.fc39.s390x.rpm 724 kB/s | 94 kB 00:00 (18/154): curl-8.4.0-1.fc40.s390x.rpm 3.0 MB/s | 362 kB 00:00 (19/154): cyrus-sasl-lib-2.1.28-11.fc39.s390x.r 5.9 MB/s | 819 kB 00:00 (20/154): diffutils-3.10-3.fc39.s390x.rpm 3.3 MB/s | 407 kB 00:00 (21/154): debugedit-5.0-10.fc39.s390x.rpm 621 kB/s | 81 kB 00:00 (22/154): dwz-0.15-3.fc39.s390x.rpm 1.2 MB/s | 144 kB 00:00 (23/154): efi-srpm-macros-5-9.fc39.noarch.rpm 195 kB/s | 22 kB 00:00 (24/154): ed-1.19-4.fc39.s390x.rpm 618 kB/s | 80 kB 00:00 (25/154): elfutils-0.189-6.fc40.s390x.rpm 4.3 MB/s | 560 kB 00:00 (26/154): elfutils-debuginfod-client-0.189-6.fc 336 kB/s | 38 kB 00:00 (27/154): elfutils-default-yama-scope-0.189-6.f 106 kB/s | 13 kB 00:00 (28/154): elfutils-libelf-0.189-6.fc40.s390x.rp 1.7 MB/s | 200 kB 00:00 (29/154): elfutils-libs-0.189-6.fc40.s390x.rpm 2.3 MB/s | 275 kB 00:00 (30/154): fedora-gpg-keys-40-0.2.noarch.rpm 979 kB/s | 130 kB 00:00 (31/154): fedora-release-40-0.14.noarch.rpm 79 kB/s | 8.8 kB 00:00 (32/154): fedora-release-common-40-0.14.noarch. 169 kB/s | 19 kB 00:00 (33/154): fedora-release-identity-basic-40-0.14 76 kB/s | 9.6 kB 00:00 (34/154): fedora-repos-40-0.2.noarch.rpm 85 kB/s | 9.3 kB 00:00 (35/154): fedora-repos-rawhide-40-0.2.noarch.rp 78 kB/s | 8.9 kB 00:00 (36/154): file-5.45-1.fc40.s390x.rpm 384 kB/s | 49 kB 00:00 (37/154): file-libs-5.45-1.fc40.s390x.rpm 5.5 MB/s | 769 kB 00:00 (38/154): filesystem-3.18-6.fc39.s390x.rpm 8.1 MB/s | 1.1 MB 00:00 (39/154): findutils-4.9.0-6.fc40.s390x.rpm 3.1 MB/s | 497 kB 00:00 (40/154): fonts-srpm-macros-2.0.5-12.fc39.noarc 241 kB/s | 26 kB 00:00 (41/154): forge-srpm-macros-0.1.0-1.fc40.noarch 160 kB/s | 18 kB 00:00 (42/154): 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1.6 MB/s | 194 kB 00:00 (146/154): util-linux-core-2.39.2-1.fc40.s390x. 3.9 MB/s | 496 kB 00:00 (147/154): which-2.21-40.fc39.s390x.rpm 378 kB/s | 43 kB 00:00 (148/154): util-linux-2.39.2-1.fc40.s390x.rpm 6.3 MB/s | 1.1 MB 00:00 (149/154): xxhash-libs-0.8.2-1.fc39.s390x.rpm 334 kB/s | 37 kB 00:00 (150/154): xz-5.4.4-1.fc39.s390x.rpm 4.5 MB/s | 557 kB 00:00 (151/154): xz-libs-5.4.4-1.fc39.s390x.rpm 876 kB/s | 114 kB 00:00 (152/154): zip-3.0-39.fc40.s390x.rpm 2.4 MB/s | 283 kB 00:00 (153/154): zlib-1.2.13-5.fc40.s390x.rpm 875 kB/s | 101 kB 00:00 (154/154): zstd-1.5.5-4.fc39.s390x.rpm 3.3 MB/s | 506 kB 00:00 -------------------------------------------------------------------------------- Total 4.1 MB/s | 53 MB 00:12 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0xA15B79CC: Userid : "Fedora (40) " Fingerprint: 115D F9AE F857 853E E844 5D0A 0727 707E A15B 79CC From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary (0xA15B79CC) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-6.fc39.s390x 1/1 Preparing : 1/1 Installing : libgcc-13.2.1-4.fc40.s390x 1/154 Running scriptlet: libgcc-13.2.1-4.fc40.s390x 1/154 Installing : crypto-policies-20230920-1.git570ea89.fc40.noarc 2/154 Running scriptlet: crypto-policies-20230920-1.git570ea89.fc40.noarc 2/154 Installing : fedora-release-identity-basic-40-0.14.noarch 3/154 Installing : fedora-repos-rawhide-40-0.2.noarch 4/154 Installing : fedora-gpg-keys-40-0.2.noarch 5/154 Installing : fedora-repos-40-0.2.noarch 6/154 Installing : fedora-release-common-40-0.14.noarch 7/154 Installing : fedora-release-40-0.14.noarch 8/154 Installing : setup-2.14.4-1.fc39.noarch 9/154 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.4-1.fc39.noarch 9/154 Installing : filesystem-3.18-6.fc39.s390x 10/154 Installing : basesystem-11-18.fc39.noarch 11/154 Installing : rust-srpm-macros-25.2-2.fc40.noarch 12/154 Installing : qt6-srpm-macros-6.6.0-1.fc40.noarch 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systemd-libs-254.5-2.fc40.s390x 47/154 Installing : mpfr-4.2.1-1.fc40.s390x 48/154 Installing : dwz-0.15-3.fc39.s390x 49/154 Installing : unzip-6.0-62.fc39.s390x 50/154 Installing : file-libs-5.45-1.fc40.s390x 51/154 Installing : file-5.45-1.fc40.s390x 52/154 Installing : alternatives-1.25-1.fc39.s390x 53/154 Installing : jansson-2.13.1-7.fc39.s390x 54/154 Installing : libcap-ng-0.8.3-8.fc40.s390x 55/154 Installing : audit-libs-3.1.2-4.fc40.s390x 56/154 Installing : pam-libs-1.5.3-4.fc40.s390x 57/154 Installing : libcom_err-1.47.0-2.fc39.s390x 58/154 Installing : libsepol-3.5-2.fc39.s390x 59/154 Installing : libsmartcols-2.39.2-1.fc40.s390x 60/154 Installing : libtasn1-4.19.0-3.fc39.s390x 61/154 Installing : libunistring-1.1-5.fc40.s390x 62/154 Installing : libidn2-2.3.4-3.fc39.s390x 63/154 Installing : lua-libs-5.4.6-3.fc39.s390x 64/154 Installing : pcre2-10.42-1.fc39.2.s390x 65/154 Installing : libselinux-3.5-5.fc39.s390x 66/154 Installing : sed-4.8-14.fc39.s390x 67/154 Installing : grep-3.11-5.fc40.s390x 68/154 Installing : findutils-1:4.9.0-6.fc40.s390x 69/154 Installing : xz-5.4.4-1.fc39.s390x 70/154 Installing : libmount-2.39.2-1.fc40.s390x 71/154 Installing : util-linux-core-2.39.2-1.fc40.s390x 72/154 Installing : libsemanage-3.5-4.fc39.s390x 73/154 Installing : shadow-utils-2:4.14.0-2.fc40.s390x 74/154 Running scriptlet: libutempter-1.2.1-10.fc39.s390x 75/154 Installing : libutempter-1.2.1-10.fc39.s390x 75/154 Installing : tar-2:1.35-2.fc40.s390x 76/154 Installing : libpsl-0.21.2-4.fc39.s390x 77/154 Installing : zip-3.0-39.fc40.s390x 78/154 Installing : zstd-1.5.5-4.fc39.s390x 79/154 Installing : cyrus-sasl-lib-2.1.28-11.fc39.s390x 80/154 Installing : gdbm-1:1.23-4.fc39.s390x 81/154 Installing : libfdisk-2.39.2-1.fc40.s390x 82/154 Installing : bzip2-1.0.8-16.fc39.s390x 83/154 Installing : libxml2-2.11.5-1.fc40.s390x 84/154 Installing : sqlite-libs-3.43.2-1.fc40.s390x 85/154 Installing : ed-1.19-4.fc39.s390x 86/154 Installing : patch-2.7.6-22.fc39.s390x 87/154 Installing : elfutils-default-yama-scope-0.189-6.fc40.noarch 88/154 Running scriptlet: elfutils-default-yama-scope-0.189-6.fc40.noarch 88/154 Installing : cpio-2.14-4.fc39.s390x 89/154 Installing : diffutils-3.10-3.fc39.s390x 90/154 Installing : keyutils-libs-1.6.1-7.fc39.s390x 91/154 Installing : libbrotli-1.1.0-1.fc40.s390x 92/154 Installing : libffi-3.4.4-4.fc39.s390x 93/154 Installing : p11-kit-0.25.1-1.fc40.s390x 94/154 Installing : p11-kit-trust-0.25.1-1.fc40.s390x 95/154 Running scriptlet: p11-kit-trust-0.25.1-1.fc40.s390x 95/154 Installing : libgomp-13.2.1-4.fc40.s390x 96/154 Installing : libnghttp2-1.57.0-2.fc40.s390x 97/154 Installing : libpkgconf-1.9.5-2.fc39.s390x 98/154 Installing : pkgconf-1.9.5-2.fc39.s390x 99/154 Installing : pkgconf-pkg-config-1.9.5-2.fc39.s390x 100/154 Installing : libsigsegv-2.14-5.fc39.s390x 101/154 Installing : gawk-5.2.2-2.fc39.s390x 102/154 Installing : libverto-0.3.2-6.fc39.s390x 103/154 Installing : lmdb-libs-0.9.31-2.fc39.s390x 104/154 Installing : libdb-convert-util-5.3.28-58.fc40.s390x 105/154 Installing : xxhash-libs-0.8.2-1.fc39.s390x 106/154 Installing : libssh-config-0.10.5-2.fc39.noarch 107/154 Installing : kernel-srpm-macros-1.0-20.fc39.noarch 108/154 Installing : gnat-srpm-macros-6-3.fc39.noarch 109/154 Installing : ghc-srpm-macros-1.6.1-3.fc40.noarch 110/154 Installing : fpc-srpm-macros-1.3-8.fc39.noarch 111/154 Installing : coreutils-common-9.4-1.fc40.s390x 112/154 Installing : openssl-libs-1:3.1.1-4.fc40.s390x 113/154 Installing : coreutils-9.4-1.fc40.s390x 114/154 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 115/154 Installing : ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 115/154 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 115/154 Installing : krb5-libs-1.21.2-2.fc40.s390x 116/154 Installing : libtirpc-1.3.4-0.fc40.s390x 117/154 Running scriptlet: authselect-libs-1.4.3-1.fc40.s390x 118/154 Installing : authselect-libs-1.4.3-1.fc40.s390x 118/154 Installing : gzip-1.12-6.fc39.s390x 119/154 Installing : cracklib-2.9.11-2.fc39.s390x 120/154 Installing : libpwquality-1.4.5-6.fc39.s390x 121/154 Installing : authselect-1.4.3-1.fc40.s390x 122/154 Installing : libnsl2-2.0.0-6.fc39.s390x 123/154 Installing : pam-1.5.3-4.fc40.s390x 124/154 Installing : libssh-0.10.5-2.fc39.s390x 125/154 Installing : libarchive-3.7.2-1.fc40.s390x 126/154 Installing : libevent-2.1.12-9.fc39.s390x 127/154 Installing : openldap-2.6.6-1.fc39.s390x 128/154 Installing : libcurl-8.4.0-1.fc40.s390x 129/154 Installing : elfutils-libs-0.189-6.fc40.s390x 130/154 Installing : elfutils-debuginfod-client-0.189-6.fc40.s390x 131/154 Installing : binutils-gold-2.41-8.fc40.s390x 132/154 Running scriptlet: binutils-gold-2.41-8.fc40.s390x 132/154 Installing : binutils-2.41-8.fc40.s390x 133/154 Running scriptlet: binutils-2.41-8.fc40.s390x 133/154 Installing : elfutils-0.189-6.fc40.s390x 134/154 Installing : gdb-minimal-13.2-11.fc40.s390x 135/154 Installing : debugedit-5.0-10.fc39.s390x 136/154 Installing : curl-8.4.0-1.fc40.s390x 137/154 Installing : rpm-sequoia-1.5.0-1.fc40.s390x 138/154 Installing : rpm-libs-4.19.0-1.fc40.s390x 139/154 Running scriptlet: rpm-4.19.0-1.fc40.s390x 140/154 Installing : rpm-4.19.0-1.fc40.s390x 140/154 Installing : efi-srpm-macros-5-9.fc39.noarch 141/154 Installing : lua-srpm-macros-1-9.fc39.noarch 142/154 Installing : rpm-build-libs-4.19.0-1.fc40.s390x 143/154 Installing : ansible-srpm-macros-1-11.fc39.noarch 144/154 Installing : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 145/154 Installing : forge-srpm-macros-0.1.0-1.fc40.noarch 146/154 Installing : go-srpm-macros-3.2.0-7.fc40.noarch 147/154 Installing : python-srpm-macros-3.12-4.fc40.noarch 148/154 Installing : redhat-rpm-config-269-1.fc40.noarch 149/154 Installing : rpm-build-4.19.0-1.fc40.s390x 150/154 Installing : pyproject-srpm-macros-1.10.0-1.fc40.noarch 151/154 Installing : util-linux-2.39.2-1.fc40.s390x 152/154 Installing : which-2.21-40.fc39.s390x 153/154 Installing : info-7.1-1.fc40.s390x 154/154 Running scriptlet: filesystem-3.18-6.fc39.s390x 154/154 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 154/154 Running scriptlet: authselect-libs-1.4.3-1.fc40.s390x 154/154 Running scriptlet: rpm-4.19.0-1.fc40.s390x 154/154 Running scriptlet: info-7.1-1.fc40.s390x 154/154 Installed: alternatives-1.25-1.fc39.s390x ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-4.fc40.s390x authselect-1.4.3-1.fc40.s390x authselect-libs-1.4.3-1.fc40.s390x basesystem-11-18.fc39.noarch bash-5.2.15-5.fc39.s390x binutils-2.41-8.fc40.s390x binutils-gold-2.41-8.fc40.s390x bzip2-1.0.8-16.fc39.s390x bzip2-libs-1.0.8-16.fc39.s390x ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch coreutils-9.4-1.fc40.s390x coreutils-common-9.4-1.fc40.s390x cpio-2.14-4.fc39.s390x cracklib-2.9.11-2.fc39.s390x crypto-policies-20230920-1.git570ea89.fc40.noarch curl-8.4.0-1.fc40.s390x cyrus-sasl-lib-2.1.28-11.fc39.s390x debugedit-5.0-10.fc39.s390x diffutils-3.10-3.fc39.s390x dwz-0.15-3.fc39.s390x ed-1.19-4.fc39.s390x efi-srpm-macros-5-9.fc39.noarch elfutils-0.189-6.fc40.s390x elfutils-debuginfod-client-0.189-6.fc40.s390x elfutils-default-yama-scope-0.189-6.fc40.noarch elfutils-libelf-0.189-6.fc40.s390x elfutils-libs-0.189-6.fc40.s390x fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.14.noarch fedora-release-common-40-0.14.noarch fedora-release-identity-basic-40-0.14.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-1.fc40.s390x file-libs-5.45-1.fc40.s390x filesystem-3.18-6.fc39.s390x findutils-1:4.9.0-6.fc40.s390x fonts-srpm-macros-1:2.0.5-12.fc39.noarch forge-srpm-macros-0.1.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.s390x gdb-minimal-13.2-11.fc40.s390x gdbm-1:1.23-4.fc39.s390x gdbm-libs-1:1.23-4.fc39.s390x ghc-srpm-macros-1.6.1-3.fc40.noarch glibc-2.38.9000-16.fc40.s390x glibc-common-2.38.9000-16.fc40.s390x glibc-gconv-extra-2.38.9000-16.fc40.s390x glibc-minimal-langpack-2.38.9000-16.fc40.s390x gmp-1:6.2.1-5.fc39.s390x gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.2.0-7.fc40.noarch grep-3.11-5.fc40.s390x gzip-1.12-6.fc39.s390x info-7.1-1.fc40.s390x jansson-2.13.1-7.fc39.s390x kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.s390x krb5-libs-1.21.2-2.fc40.s390x libacl-2.3.1-10.fc40.s390x libarchive-3.7.2-1.fc40.s390x libattr-2.5.1-9.fc40.s390x libblkid-2.39.2-1.fc40.s390x libbrotli-1.1.0-1.fc40.s390x libcap-2.48-7.fc39.s390x libcap-ng-0.8.3-8.fc40.s390x libcom_err-1.47.0-2.fc39.s390x libcurl-8.4.0-1.fc40.s390x libdb-convert-util-5.3.28-58.fc40.s390x libeconf-0.5.2-1.fc40.s390x libevent-2.1.12-9.fc39.s390x libfdisk-2.39.2-1.fc40.s390x libffi-3.4.4-4.fc39.s390x libgcc-13.2.1-4.fc40.s390x libgomp-13.2.1-4.fc40.s390x libidn2-2.3.4-3.fc39.s390x libmount-2.39.2-1.fc40.s390x libnghttp2-1.57.0-2.fc40.s390x libnsl2-2.0.0-6.fc39.s390x libpkgconf-1.9.5-2.fc39.s390x libpsl-0.21.2-4.fc39.s390x libpwquality-1.4.5-6.fc39.s390x libselinux-3.5-5.fc39.s390x libsemanage-3.5-4.fc39.s390x libsepol-3.5-2.fc39.s390x libsigsegv-2.14-5.fc39.s390x libsmartcols-2.39.2-1.fc40.s390x libssh-0.10.5-2.fc39.s390x libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-4.fc40.s390x libtasn1-4.19.0-3.fc39.s390x libtirpc-1.3.4-0.fc40.s390x libunistring-1.1-5.fc40.s390x libutempter-1.2.1-10.fc39.s390x libuuid-2.39.2-1.fc40.s390x libverto-0.3.2-6.fc39.s390x libxcrypt-4.4.36-2.fc39.s390x libxml2-2.11.5-1.fc40.s390x libzstd-1.5.5-4.fc39.s390x lmdb-libs-0.9.31-2.fc39.s390x lua-libs-5.4.6-3.fc39.s390x lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.s390x mpfr-4.2.1-1.fc40.s390x ncurses-base-6.4-8.20231001.fc40.noarch ncurses-libs-6.4-8.20231001.fc40.s390x ocaml-srpm-macros-9-1.fc40.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.s390x openssl-libs-1:3.1.1-4.fc40.s390x p11-kit-0.25.1-1.fc40.s390x p11-kit-trust-0.25.1-1.fc40.s390x package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-4.fc40.s390x pam-libs-1.5.3-4.fc40.s390x patch-2.7.6-22.fc39.s390x pcre2-10.42-1.fc39.2.s390x pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.s390x pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.s390x popt-1.19-3.fc39.s390x publicsuffix-list-dafsa-20230812-1.fc40.noarch pyproject-srpm-macros-1.10.0-1.fc40.noarch python-srpm-macros-3.12-4.fc40.noarch qt5-srpm-macros-5.15.11-1.fc40.noarch qt6-srpm-macros-6.6.0-1.fc40.noarch readline-8.2-4.fc39.s390x redhat-rpm-config-269-1.fc40.noarch rpm-4.19.0-1.fc40.s390x rpm-build-4.19.0-1.fc40.s390x rpm-build-libs-4.19.0-1.fc40.s390x rpm-libs-4.19.0-1.fc40.s390x rpm-sequoia-1.5.0-1.fc40.s390x rust-srpm-macros-25.2-2.fc40.noarch sed-4.8-14.fc39.s390x setup-2.14.4-1.fc39.noarch shadow-utils-2:4.14.0-2.fc40.s390x sqlite-libs-3.43.2-1.fc40.s390x systemd-libs-254.5-2.fc40.s390x tar-2:1.35-2.fc40.s390x unzip-6.0-62.fc39.s390x util-linux-2.39.2-1.fc40.s390x util-linux-core-2.39.2-1.fc40.s390x which-2.21-40.fc39.s390x xxhash-libs-0.8.2-1.fc39.s390x xz-5.4.4-1.fc39.s390x xz-libs-5.4.4-1.fc39.s390x zip-3.0-39.fc40.s390x zlib-1.2.13-5.fc40.s390x zstd-1.5.5-4.fc39.s390x Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.25-1.fc39.s390x ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-4.fc40.s390x authselect-1.4.3-1.fc40.s390x authselect-libs-1.4.3-1.fc40.s390x basesystem-11-18.fc39.noarch bash-5.2.15-5.fc39.s390x binutils-2.41-8.fc40.s390x binutils-gold-2.41-8.fc40.s390x bzip2-1.0.8-16.fc39.s390x bzip2-libs-1.0.8-16.fc39.s390x ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch coreutils-9.4-1.fc40.s390x coreutils-common-9.4-1.fc40.s390x cpio-2.14-4.fc39.s390x cracklib-2.9.11-2.fc39.s390x crypto-policies-20230920-1.git570ea89.fc40.noarch curl-8.4.0-1.fc40.s390x cyrus-sasl-lib-2.1.28-11.fc39.s390x debugedit-5.0-10.fc39.s390x diffutils-3.10-3.fc39.s390x dwz-0.15-3.fc39.s390x ed-1.19-4.fc39.s390x efi-srpm-macros-5-9.fc39.noarch elfutils-0.189-6.fc40.s390x elfutils-debuginfod-client-0.189-6.fc40.s390x elfutils-default-yama-scope-0.189-6.fc40.noarch elfutils-libelf-0.189-6.fc40.s390x elfutils-libs-0.189-6.fc40.s390x fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.14.noarch fedora-release-common-40-0.14.noarch fedora-release-identity-basic-40-0.14.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-1.fc40.s390x file-libs-5.45-1.fc40.s390x filesystem-3.18-6.fc39.s390x findutils-4.9.0-6.fc40.s390x fonts-srpm-macros-2.0.5-12.fc39.noarch forge-srpm-macros-0.1.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.s390x gdb-minimal-13.2-11.fc40.s390x gdbm-1.23-4.fc39.s390x gdbm-libs-1.23-4.fc39.s390x ghc-srpm-macros-1.6.1-3.fc40.noarch glibc-2.38.9000-16.fc40.s390x glibc-common-2.38.9000-16.fc40.s390x glibc-gconv-extra-2.38.9000-16.fc40.s390x glibc-minimal-langpack-2.38.9000-16.fc40.s390x gmp-6.2.1-5.fc39.s390x gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.2.0-7.fc40.noarch gpg-pubkey-18b8e74c-62f2920f gpg-pubkey-a15b79cc-63d04c2c grep-3.11-5.fc40.s390x gzip-1.12-6.fc39.s390x info-7.1-1.fc40.s390x jansson-2.13.1-7.fc39.s390x kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.s390x krb5-libs-1.21.2-2.fc40.s390x libacl-2.3.1-10.fc40.s390x libarchive-3.7.2-1.fc40.s390x libattr-2.5.1-9.fc40.s390x libblkid-2.39.2-1.fc40.s390x libbrotli-1.1.0-1.fc40.s390x libcap-2.48-7.fc39.s390x libcap-ng-0.8.3-8.fc40.s390x libcom_err-1.47.0-2.fc39.s390x libcurl-8.4.0-1.fc40.s390x libdb-convert-util-5.3.28-58.fc40.s390x libeconf-0.5.2-1.fc40.s390x libevent-2.1.12-9.fc39.s390x libfdisk-2.39.2-1.fc40.s390x libffi-3.4.4-4.fc39.s390x libgcc-13.2.1-4.fc40.s390x libgomp-13.2.1-4.fc40.s390x libidn2-2.3.4-3.fc39.s390x libmount-2.39.2-1.fc40.s390x libnghttp2-1.57.0-2.fc40.s390x libnsl2-2.0.0-6.fc39.s390x libpkgconf-1.9.5-2.fc39.s390x libpsl-0.21.2-4.fc39.s390x libpwquality-1.4.5-6.fc39.s390x libselinux-3.5-5.fc39.s390x libsemanage-3.5-4.fc39.s390x libsepol-3.5-2.fc39.s390x libsigsegv-2.14-5.fc39.s390x libsmartcols-2.39.2-1.fc40.s390x libssh-0.10.5-2.fc39.s390x libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-4.fc40.s390x libtasn1-4.19.0-3.fc39.s390x libtirpc-1.3.4-0.fc40.s390x libunistring-1.1-5.fc40.s390x libutempter-1.2.1-10.fc39.s390x libuuid-2.39.2-1.fc40.s390x libverto-0.3.2-6.fc39.s390x libxcrypt-4.4.36-2.fc39.s390x libxml2-2.11.5-1.fc40.s390x libzstd-1.5.5-4.fc39.s390x lmdb-libs-0.9.31-2.fc39.s390x lua-libs-5.4.6-3.fc39.s390x lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.s390x mpfr-4.2.1-1.fc40.s390x ncurses-base-6.4-8.20231001.fc40.noarch ncurses-libs-6.4-8.20231001.fc40.s390x ocaml-srpm-macros-9-1.fc40.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.s390x openssl-libs-3.1.1-4.fc40.s390x p11-kit-0.25.1-1.fc40.s390x p11-kit-trust-0.25.1-1.fc40.s390x package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-4.fc40.s390x pam-libs-1.5.3-4.fc40.s390x patch-2.7.6-22.fc39.s390x pcre2-10.42-1.fc39.2.s390x pcre2-syntax-10.42-1.fc39.2.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.s390x pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.s390x popt-1.19-3.fc39.s390x publicsuffix-list-dafsa-20230812-1.fc40.noarch pyproject-srpm-macros-1.10.0-1.fc40.noarch python-srpm-macros-3.12-4.fc40.noarch qt5-srpm-macros-5.15.11-1.fc40.noarch qt6-srpm-macros-6.6.0-1.fc40.noarch readline-8.2-4.fc39.s390x redhat-rpm-config-269-1.fc40.noarch rpm-4.19.0-1.fc40.s390x rpm-build-4.19.0-1.fc40.s390x rpm-build-libs-4.19.0-1.fc40.s390x rpm-libs-4.19.0-1.fc40.s390x rpm-sequoia-1.5.0-1.fc40.s390x rust-srpm-macros-25.2-2.fc40.noarch sed-4.8-14.fc39.s390x setup-2.14.4-1.fc39.noarch shadow-utils-4.14.0-2.fc40.s390x sqlite-libs-3.43.2-1.fc40.s390x systemd-libs-254.5-2.fc40.s390x tar-1.35-2.fc40.s390x unzip-6.0-62.fc39.s390x util-linux-2.39.2-1.fc40.s390x util-linux-core-2.39.2-1.fc40.s390x which-2.21-40.fc39.s390x xxhash-libs-0.8.2-1.fc39.s390x xz-5.4.4-1.fc39.s390x xz-libs-5.4.4-1.fc39.s390x zip-3.0-39.fc40.s390x zlib-1.2.13-5.fc40.s390x zstd-1.5.5-4.fc39.s390x Start: buildsrpm Start: rpmbuild -bs Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1697328000 Wrote: /builddir/build/SRPMS/bout++-5.0.0-11.fc40.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-s390x-1698439533.476517/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-s390x-1698439533.476517/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-s390x-1698439533.476517/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-8yxv0isq/bout++/bout++.spec) Config(child) 2 minutes 20 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/bout++-5.0.0-11.fc40.src.rpm) Config(fedora-rawhide-s390x) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1698439533.476517/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1698439533.476517/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-1698439533.476517/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Finish: chroot init INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-1.fc40.s390x rpm-sequoia-1.5.0-1.fc40.s390x python3-dnf-4.18.0-1.fc40.noarch python3-dnf-plugins-core-4.4.3-1.fc40.noarch yum-4.18.0-1.fc40.noarch Start: build phase for bout++-5.0.0-11.fc40.src.rpm Start: build setup for bout++-5.0.0-11.fc40.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1697328000 Wrote: /builddir/build/SRPMS/bout++-5.0.0-11.fc40.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 275 B/s | 1.8 kB 00:06 fedora 1.2 kB/s | 6.1 kB 00:05 Dependencies resolved. ============================================================================================ Package Arch Version Repo Size ============================================================================================ Installing: chrpath s390x 0.16-21.fc39 fedora 30 k cmake s390x 3.27.7-1.fc40 fedora 7.8 M doxygen s390x 2:1.9.8-1.fc40 fedora 5.6 M environment-modules s390x 5.3.1-2.fc39 fedora 703 k fftw-devel s390x 3.3.10-7.fc39 fedora 133 k flexiblas-devel s390x 3.3.1-5.fc39 fedora 117 k fmt-devel s390x 10.0.0-3.fc39 fedora 128 k gcc-c++ s390x 13.2.1-4.fc40 fedora 11 M gettext-devel s390x 0.22-2.fc39 fedora 237 k hdf5-devel s390x 1.12.1-12.fc40 copr_base 1.3 M hdf5-mpich-devel s390x 1.12.1-12.fc40 copr_base 1.2 M hdf5-openmpi-devel s390x 1.12.1-12.fc40 copr_base 1.2 M m4 s390x 1.4.19-7.fc40 fedora 313 k make s390x 1:4.4.1-2.fc39 fedora 605 k mpark-variant-devel s390x 1.4.0-10.fc39 fedora 27 k mpich-devel s390x 4.1.2-7.fc40 fedora 1.4 M netcdf-cxx4-devel s390x 4.3.1-9.fc40 copr_base 57 k netcdf-devel s390x 4.9.0-5.fc38 fedora 99 k openmpi-devel s390x 5.0.0-1.fc40 copr_base 1.7 M petsc-mpich-devel s390x 3.20.0-1.fc40 copr_base 4.5 M petsc-openmpi-devel s390x 3.20.0-1.fc40 copr_base 7.0 M python3 s390x 3.12.0-2.fc40 fedora 26 k python3-boutdata noarch 0.1.10-4.fc39 fedora 187 k python3-boututils noarch 0.1.10-4.fc39 fedora 167 k python3-cython s390x 3.0.2-1.fc40 fedora 3.9 M python3-devel s390x 3.12.0-2.fc40 fedora 311 k python3-jinja2 noarch 3.1.2-6.fc40 fedora 505 k python3-netcdf4 s390x 1.6.5-1.fc40 fedora 635 k python3-numpy s390x 1:1.26.0-1.fc40 fedora 7.1 M python3-scipy s390x 1.11.1-1.fc39 fedora 16 M python3-sphinx noarch 1:7.1.2-2.fc40 fedora 2.6 M python3-tables s390x 3.8.0-6.fc40 fedora 1.6 M sundials-devel s390x 6.6.1-3.fc40 fedora 962 k sundials-mpich-devel s390x 6.6.1-3.fc40 fedora 1.0 M sundials-openmpi-devel s390x 6.6.1-3.fc40 fedora 1.0 M zlib-devel s390x 1.2.13-5.fc40 fedora 44 k Installing dependencies: MUMPS-common noarch 5.5.1-6.fc40 copr_base 831 k MUMPS-mpich s390x 5.5.1-6.fc40 copr_base 2.3 M MUMPS-openmpi s390x 5.5.1-6.fc40 copr_base 2.2 M SuperLUMT-common noarch 3.1.0-36.fc39 fedora 642 k SuperLUMT64-double s390x 3.1.0-36.fc39 fedora 99 k abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k adobe-mappings-cmap noarch 20230622-1.fc39 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20230622-1.fc39 fedora 113 k adobe-mappings-pdf noarch 20190401-5.fc39 fedora 698 k annobin-docs noarch 12.28-1.fc40 fedora 94 k annobin-plugin-gcc s390x 12.28-1.fc40 fedora 959 k avahi-libs s390x 0.8-24.fc39 fedora 67 k blosc s390x 1.21.4-2.fc39 fedora 49 k blosc2 s390x 2.10.5-2.fc40 fedora 212 k cairo s390x 1.18.0-1.fc40 fedora 720 k cairo-gobject s390x 1.18.0-1.fc40 fedora 18 k clang-libs s390x 17.0.3-1.fc40 fedora 29 M clang-resource-filesystem noarch 17.0.3-1.fc40 fedora 14 k cmake-data noarch 3.27.7-1.fc40 fedora 2.2 M cmake-filesystem s390x 3.27.7-1.fc40 fedora 19 k cmake-rpm-macros noarch 3.27.7-1.fc40 fedora 19 k cpp s390x 13.2.1-4.fc40 fedora 8.8 M crypto-policies-scripts noarch 20230920-1.git570ea89.fc40 fedora 115 k cups-libs s390x 1:2.4.7-1.fc40 fedora 278 k dbus s390x 1:1.14.10-1.fc40 fedora 8.1 k dbus-broker s390x 33-2.fc39 fedora 173 k dbus-common noarch 1:1.14.10-1.fc40 fedora 15 k dbus-libs s390x 1:1.14.10-1.fc40 fedora 159 k default-fonts-core-sans noarch 4.0-9.fc40 fedora 32 k dejavu-sans-fonts noarch 2.37-21.fc40 fedora 1.3 M emacs-filesystem noarch 1:29.1-12.fc40 fedora 7.2 k expat s390x 2.5.0-3.fc39 fedora 114 k fftw s390x 3.3.10-7.fc39 fedora 40 k fftw-libs s390x 3.3.10-7.fc39 fedora 7.5 k fftw-libs-double s390x 3.3.10-7.fc39 fedora 667 k fftw-libs-long s390x 3.3.10-7.fc39 fedora 820 k fftw-libs-single s390x 3.3.10-7.fc39 fedora 671 k flexiblas s390x 3.3.1-5.fc39 fedora 33 k flexiblas-netlib s390x 3.3.1-5.fc39 fedora 3.6 M flexiblas-netlib64 s390x 3.3.1-5.fc39 fedora 3.5 M flexiblas-openblas-openmp s390x 3.3.1-5.fc39 fedora 17 k flexiblas-openblas-openmp64 s390x 3.3.1-5.fc39 fedora 17 k fmt s390x 10.0.0-3.fc39 fedora 132 k fontconfig s390x 2.14.2-5.fc40 fedora 305 k fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k freetype s390x 2.13.1-2.fc39 fedora 441 k fribidi s390x 1.0.13-2.fc39 fedora 93 k gc s390x 8.2.2-4.fc39 fedora 114 k gcc s390x 13.2.1-4.fc40 fedora 28 M gcc-gfortran s390x 13.2.1-4.fc40 fedora 10 M gcc-plugin-annobin s390x 13.2.1-4.fc40 fedora 48 k gd s390x 2.3.3-12.fc39 fedora 152 k gdk-pixbuf2 s390x 2.42.10-5.fc39 fedora 484 k gettext s390x 0.22-2.fc39 fedora 1.1 M gettext-common-devel noarch 0.22-2.fc39 fedora 410 k gettext-envsubst s390x 0.22-2.fc39 fedora 37 k gettext-libs s390x 0.22-2.fc39 fedora 346 k gettext-runtime s390x 0.22-2.fc39 fedora 120 k glib2 s390x 2.78.1-1.fc40 fedora 2.8 M glibc-devel s390x 2.38.9000-16.fc40 fedora 105 k glibc-headers-s390 noarch 2.38.9000-16.fc40 fedora 568 k gnutls s390x 3.8.1-1.fc40 fedora 1.1 M google-droid-sans-fonts noarch 20200215-17.fc40 fedora 2.7 M google-noto-fonts-common noarch 20230801-3.fc40 fedora 17 k google-noto-sans-vf-fonts noarch 20230801-3.fc40 fedora 583 k graphite2 s390x 1.3.14-12.fc39 fedora 100 k graphviz s390x 9.0.0-2.fc40 fedora 5.1 M groff-base s390x 1.23.0-2.fc39 fedora 1.2 M gts s390x 0.7.6-46.20121130.fc39 fedora 242 k guile22 s390x 2.2.7-9.fc39 fedora 6.5 M harfbuzz s390x 8.2.1-2.fc40 fedora 1.0 M hdf-libs s390x 4.2.15-14.fc40 fedora 308 k hdf5 s390x 1.12.1-12.fc40 copr_base 2.4 M hdf5-mpich s390x 1.12.1-12.fc40 copr_base 2.3 M hdf5-openmpi s390x 1.12.1-12.fc40 copr_base 2.3 M highway s390x 1.0.7-1.fc40 fedora 283 k hwloc-libs s390x 2.9.3-1.fc40 fedora 2.3 M hypre-mpich s390x 2.24.0-8.fc40 copr_base 2.1 M hypre-openmpi s390x 2.24.0-8.fc40 copr_base 2.1 M jbig2dec-libs s390x 0.19-10.fc39 fedora 77 k jbigkit-libs s390x 2.1-26.fc39 fedora 55 k jsoncpp s390x 1.9.5-5.fc39 fedora 96 k kernel-headers s390x 6.6.0-0.rc6.git0.1.fc40 fedora 1.5 M kmod-libs s390x 30-6.fc39 fedora 71 k lasi s390x 1.1.3-11.fc39 fedora 54 k lcms2 s390x 2.15-2.fc39 fedora 184 k less s390x 643-1.fc40 fedora 185 k libICE s390x 1.1.1-1.fc40 fedora 77 k libSM s390x 1.2.4-1.fc40 fedora 45 k libX11 s390x 1.8.7-1.fc40 fedora 669 k libX11-common noarch 1.8.7-1.fc40 fedora 176 k libXau s390x 1.0.11-4.fc40 fedora 31 k libXext s390x 1.3.5-4.fc40 fedora 40 k libXft s390x 2.3.8-4.fc40 fedora 76 k libXpm s390x 3.5.17-1.fc40 fedora 69 k libXrender s390x 0.9.11-4.fc40 fedora 28 k libXt s390x 1.3.0-1.fc40 fedora 191 k libaec s390x 1.0.6-5.fc39 fedora 45 k libaec-devel s390x 1.0.6-5.fc39 fedora 12 k libaom s390x 3.7.0-1.fc40 fedora 1.4 M libasan s390x 13.2.1-4.fc40 fedora 509 k libatomic s390x 13.2.1-4.fc40 fedora 35 k libavif s390x 0.11.1-11.fc39 fedora 89 k libb2 s390x 0.98.1-9.fc39 fedora 27 k libcbor s390x 0.10.2-2.fc39 fedora 58 k libcurl-devel s390x 8.4.0-1.fc40 fedora 1.0 M libdatrie s390x 0.2.13-7.fc39 fedora 33 k libdav1d s390x 1.2.1-2.fc39 fedora 323 k libedit s390x 3.1-48.20230828cvs.fc40 fedora 116 k libfabric s390x 1.19.0-1.fc40 fedora 643 k libfido2 s390x 1.13.0-3.fc39 fedora 94 k libgfortran s390x 13.2.1-4.fc40 fedora 578 k libgs s390x 10.01.2-3.fc39 fedora 3.7 M libibverbs s390x 48.0-1.fc40 fedora 459 k libijs s390x 0.35-19.fc39 fedora 29 k libimagequant s390x 4.0.3-1.fc40 fedora 357 k libjpeg-turbo s390x 2.1.4-3.fc39 fedora 178 k libjxl s390x 1:0.8.2-3.fc40 fedora 1.0 M liblerc s390x 4.0.0-4.fc39 fedora 112 k libmpc s390x 1.3.1-3.fc39 fedora 73 k libnl3 s390x 3.8.0-1.fc40 fedora 353 k libpaper s390x 1:2.1.1-1.fc39 fedora 27 k libpipeline s390x 1.5.7-3.fc39 fedora 53 k libpng s390x 2:1.6.40-1.fc40 fedora 130 k libqhull_r s390x 1:8.0.2-2.fc40 fedora 203 k libraqm s390x 0.8.0-5.fc39 fedora 21 k librdmacm s390x 48.0-1.fc40 fedora 73 k librsvg2 s390x 2.57.0-3.fc40 fedora 1.7 M libseccomp s390x 2.5.3-6.fc39 fedora 73 k libstdc++-devel s390x 13.2.1-4.fc40 fedora 2.6 M libthai s390x 0.1.29-6.fc39 fedora 215 k libtiff s390x 4.5.0-3.fc40 fedora 335 k libtool-ltdl s390x 2.4.7-8.fc40 fedora 37 k libubsan s390x 13.2.1-4.fc40 fedora 221 k libuv s390x 1:1.46.0-4.fc40 fedora 250 k libwebp s390x 1.3.2-2.fc40 fedora 256 k libxcb s390x 1.16-2.fc40 fedora 250 k libxcrypt-devel s390x 4.4.36-2.fc39 fedora 30 k libxslt s390x 1.1.38-3.fc39 fedora 188 k llvm-libs s390x 17.0.3-1.fc40 fedora 36 M logrotate s390x 3.21.0-4.fc39 fedora 75 k lzo s390x 2.10-9.fc39 fedora 77 k man-db s390x 2.12.0-3.fc40 fedora 1.3 M metis s390x 5.1.0.3-2.fc39 fedora 603 k mpdecimal s390x 2.5.1-7.fc39 fedora 100 k mpich s390x 4.1.2-7.fc40 fedora 2.1 M munge s390x 0.5.15-5.fc39 fedora 136 k munge-libs s390x 0.5.15-5.fc39 fedora 20 k ncurses s390x 6.4-8.20231001.fc40 fedora 427 k netcdf s390x 4.9.0-5.fc38 fedora 871 k netcdf-cxx4 s390x 4.3.1-9.fc40 copr_base 86 k netpbm s390x 11.02.00-2.fc39 fedora 191 k nettle s390x 3.9.1-2.fc39 fedora 456 k nspr s390x 4.35.0-15.fc40 fedora 147 k nss s390x 3.94.0-2.fc40 fedora 708 k nss-softokn s390x 3.94.0-2.fc40 fedora 425 k nss-softokn-freebl s390x 3.94.0-2.fc40 fedora 352 k nss-sysinit s390x 3.94.0-2.fc40 fedora 18 k nss-util s390x 3.94.0-2.fc40 fedora 91 k openblas s390x 0.3.21-6.fc39 fedora 35 k openblas-openmp s390x 0.3.21-6.fc39 fedora 4.3 M openblas-openmp64 s390x 0.3.21-6.fc39 fedora 4.2 M openjpeg2 s390x 2.5.0-5.fc40 fedora 197 k openmpi s390x 5.0.0-1.fc40 copr_base 1.7 M openssh s390x 9.3p1-13.fc40 fedora 444 k openssh-clients s390x 9.3p1-13.fc40 fedora 762 k orangefs s390x 2.9.8-9.fc39 fedora 1.9 M pango s390x 1.51.0-1.fc40 fedora 354 k perl-AutoLoader noarch 5.74-502.fc40 fedora 21 k perl-B s390x 1.88-502.fc40 fedora 178 k perl-Carp noarch 1.54-500.fc39 fedora 29 k perl-Class-Struct noarch 0.68-502.fc40 fedora 22 k perl-Data-Dumper s390x 2.188-501.fc39 fedora 57 k perl-Digest noarch 1.20-500.fc39 fedora 25 k perl-Digest-MD5 s390x 2.58-501.fc40 fedora 35 k perl-DynaLoader s390x 1.54-502.fc40 fedora 26 k perl-Encode s390x 4:3.19-500.fc39 fedora 1.7 M perl-Errno s390x 1.37-502.fc40 fedora 15 k perl-Exporter noarch 5.77-500.fc39 fedora 31 k perl-Fcntl s390x 1.15-502.fc40 fedora 21 k perl-File-Basename noarch 2.86-502.fc40 fedora 17 k perl-File-Path noarch 2.18-500.fc39 fedora 35 k perl-File-Temp noarch 1:0.231.100-500.fc39 fedora 58 k perl-File-stat noarch 1.13-502.fc40 fedora 17 k perl-FileHandle noarch 2.05-502.fc40 fedora 16 k perl-Getopt-Long noarch 1:2.54-500.fc39 fedora 60 k perl-Getopt-Std noarch 1.13-502.fc40 fedora 16 k perl-HTTP-Tiny noarch 0.088-3.fc39 fedora 56 k perl-IO s390x 1.52-502.fc40 fedora 82 k perl-IO-Socket-IP noarch 0.42-1.fc39 fedora 42 k perl-IO-Socket-SSL noarch 2.083-3.fc39 fedora 225 k perl-IPC-Open3 noarch 1.22-502.fc40 fedora 22 k perl-MIME-Base64 s390x 3.16-500.fc39 fedora 30 k perl-Mozilla-CA noarch 20230821-1.fc40 fedora 13 k perl-Net-SSLeay s390x 1.92-10.fc39 fedora 363 k perl-POSIX s390x 2.13-502.fc40 fedora 98 k perl-PathTools s390x 3.89-500.fc39 fedora 87 k perl-Pod-Escapes noarch 1:1.07-501.fc40 fedora 19 k perl-Pod-Perldoc noarch 3.28.01-501.fc39 fedora 86 k perl-Pod-Simple noarch 1:3.45-4.fc39 fedora 218 k perl-Pod-Usage noarch 4:2.03-500.fc39 fedora 39 k perl-Scalar-List-Utils s390x 5:1.63-500.fc39 fedora 74 k perl-SelectSaver noarch 1.02-502.fc40 fedora 12 k perl-Socket s390x 4:2.037-3.fc39 fedora 55 k perl-Storable s390x 1:3.32-500.fc39 fedora 100 k perl-Symbol noarch 1.09-502.fc40 fedora 14 k perl-Term-ANSIColor noarch 5.01-501.fc39 fedora 47 k perl-Term-Cap noarch 1.18-500.fc39 fedora 22 k perl-Text-ParseWords noarch 3.31-500.fc39 fedora 16 k perl-Text-Tabs+Wrap noarch 2023.0511-3.fc39 fedora 22 k perl-Time-Local noarch 2:1.350-3.fc39 fedora 34 k perl-URI noarch 5.21-1.fc40 fedora 125 k perl-base noarch 2.27-502.fc40 fedora 16 k perl-constant noarch 1.33-501.fc39 fedora 22 k perl-if noarch 0.61.000-502.fc40 fedora 14 k perl-interpreter s390x 4:5.38.0-502.fc40 fedora 72 k perl-libnet noarch 3.15-501.fc39 fedora 129 k perl-libs s390x 4:5.38.0-502.fc40 fedora 2.5 M perl-locale noarch 1.10-502.fc40 fedora 14 k perl-mro s390x 1.28-502.fc40 fedora 29 k perl-overload noarch 1.37-502.fc40 fedora 46 k perl-overloading noarch 0.02-502.fc40 fedora 13 k perl-parent noarch 1:0.241-500.fc39 fedora 14 k perl-podlators noarch 1:5.01-500.fc39 fedora 125 k perl-vars noarch 1.05-502.fc40 fedora 13 k petsc-mpich s390x 3.20.0-1.fc40 copr_base 7.7 M petsc-openmpi s390x 3.20.0-1.fc40 copr_base 7.9 M pixman s390x 0.42.2-2.fc39 fedora 212 k pmix s390x 4.2.7-1.fc40 copr_base 695 k poppler s390x 23.08.0-1.fc39 fedora 1.2 M poppler-data noarch 0.4.11-5.fc39 fedora 2.0 M poppler-glib s390x 23.08.0-1.fc39 fedora 183 k procps-ng s390x 4.0.3-5.fc40 fedora 389 k prrte s390x 3.0.2-1.fc40 copr_base 80 k prrte-libs s390x 3.0.2-1.fc40 copr_base 520 k ptscotch-mpich s390x 7.0.4-1.fc40 copr_base 452 k ptscotch-mpich-devel s390x 7.0.4-1.fc40 copr_base 44 k ptscotch-mpich-devel-parmetis s390x 7.0.4-1.fc40 copr_base 14 k ptscotch-openmpi s390x 7.0.4-1.fc40 copr_base 453 k ptscotch-openmpi-devel s390x 7.0.4-1.fc40 copr_base 44 k pyproject-rpm-macros noarch 1.10.0-1.fc40 fedora 41 k python-pip-wheel noarch 23.2.1-1.fc39 fedora 1.5 M python-rpm-macros noarch 3.12-4.fc40 fedora 19 k python3-appdirs noarch 1.4.4-11.fc39 fedora 23 k python3-babel noarch 2.12.1-6.fc40 fedora 6.9 M python3-blosc2 s390x 2.2.5-3.fc39 fedora 286 k python3-brotli s390x 1.1.0-1.fc40 fedora 380 k python3-cairo s390x 1.25.1-1.fc40 fedora 128 k python3-certifi noarch 2023.05.07-2.fc39 fedora 14 k python3-cftime s390x 1.6.3-1.fc40 fedora 225 k python3-charset-normalizer noarch 3.3.1-1.fc40 fedora 107 k python3-contourpy s390x 1.1.1-1.fc40 fedora 239 k python3-cpuinfo noarch 9.0.0-5.fc39 fedora 68 k python3-cycler noarch 0.11.0-9.fc39 fedora 21 k python3-dateutil noarch 1:2.8.2-10.fc39 fedora 355 k python3-docutils noarch 0.20.1-1.fc40 fedora 1.0 M python3-fonttools s390x 4.43.1-1.fc40 fedora 2.9 M python3-fs noarch 2.4.16-5.fc39 fedora 302 k python3-idna noarch 3.4-5.fc40 fedora 109 k python3-imagesize noarch 1.4.1-5.fc40 fedora 22 k python3-kiwisolver s390x 1.4.5-1.fc40 fedora 69 k python3-libs s390x 3.12.0-2.fc40 fedora 9.2 M python3-lxml s390x 4.9.3-2.fc39 fedora 1.5 M python3-markupsafe s390x 2.1.3-2.fc39 fedora 30 k python3-matplotlib s390x 3.8.0-1.fc40 fedora 4.4 M python3-matplotlib-data noarch 3.8.0-1.fc40 fedora 524 k python3-matplotlib-data-fonts noarch 3.8.0-1.fc40 fedora 2.3 M python3-matplotlib-tk s390x 3.8.0-1.fc40 fedora 47 k python3-mpmath noarch 1.3.0-3.fc39 fedora 1.1 M python3-msgpack s390x 1.0.6-1.fc40 fedora 126 k python3-natsort noarch 7.1.1-10.fc39 fedora 70 k python3-ndindex s390x 1.7-9.fc39 fedora 771 k python3-numexpr s390x 2.8.5-2.fc40 fedora 184 k python3-numpy-f2py s390x 1:1.26.0-1.fc40 fedora 509 k python3-olefile noarch 0.46-21.fc39 fedora 66 k python3-packaging noarch 23.2-2.fc40 fedora 125 k python3-pillow s390x 10.1.0-1.fc40 fedora 957 k python3-pillow-tk s390x 10.1.0-1.fc40 fedora 29 k python3-pooch noarch 1.5.2-12.fc39 fedora 126 k python3-pygments noarch 2.16.1-1.fc40 fedora 2.4 M python3-pyparsing noarch 3.0.9-11.fc39 fedora 254 k python3-requests noarch 2.28.2-7.fc40 fedora 152 k python3-rpm-generators noarch 14-8.fc40 fedora 30 k python3-rpm-macros noarch 3.12-4.fc40 fedora 14 k python3-setuptools noarch 68.2.2-1.fc40 fedora 1.5 M python3-six noarch 1.16.0-12.fc39 fedora 41 k python3-snowballstemmer noarch 2.2.0-7.fc39 fedora 257 k python3-sphinx-theme-alabaster noarch 0.7.13-1.fc40 fedora 29 k python3-sphinxcontrib-applehelp noarch 1.0.7-1.fc40 fedora 45 k python3-sphinxcontrib-devhelp noarch 1.0.2-14.fc39 fedora 41 k python3-sphinxcontrib-htmlhelp noarch 2.0.4-1.fc40 fedora 51 k python3-sphinxcontrib-jsmath noarch 1.0.1-22.fc39 fedora 17 k python3-sphinxcontrib-qthelp noarch 1.0.3-15.fc39 fedora 47 k python3-sphinxcontrib-serializinghtml noarch 1.1.9-1.fc40 fedora 45 k python3-sympy s390x 1.12-2.fc39 fedora 14 M python3-tkinter s390x 3.12.0-2.fc40 fedora 409 k python3-urllib3 noarch 1.26.18-1.fc40 fedora 274 k rav1e-libs s390x 0.6.6-3.fc40 fedora 836 k rhash s390x 1.4.3-3.fc39 fedora 200 k rpm-mpi-hooks noarch 8-6.fc39 fedora 11 k rsvg-pixbuf-loader s390x 2.57.0-3.fc40 fedora 16 k scalapack-common s390x 2.2.0-6.fc40 copr_base 19 k scalapack-mpich s390x 2.2.0-6.fc40 copr_base 1.9 M scalapack-openmpi s390x 2.2.0-6.fc40 copr_base 1.9 M shared-mime-info s390x 2.3-1.fc40 fedora 389 k snappy s390x 1.1.10-2.fc39 fedora 38 k suitesparse s390x 5.13.0-4.fc40 fedora 1.5 M suitesparse64 s390x 5.13.0-4.fc40 fedora 1.5 M sundials s390x 6.6.1-3.fc40 fedora 1.2 M sundials-mpich s390x 6.6.1-3.fc40 fedora 1.3 M sundials-openmpi s390x 6.6.1-3.fc40 fedora 1.3 M superlu_dist-mpich s390x 1:8.1.2-6.fc40 copr_base 611 k superlu_dist-mpich-devel s390x 1:8.1.2-6.fc40 copr_base 131 k superlu_dist-openmpi s390x 1:8.1.2-6.fc40 copr_base 616 k superlu_dist-openmpi-devel s390x 1:8.1.2-6.fc40 copr_base 130 k svt-av1-libs s390x 1.4.1-3.fc39 fedora 1.2 M systemd s390x 254.5-2.fc40 fedora 4.7 M systemd-pam s390x 254.5-2.fc40 fedora 362 k systemd-rpm-macros noarch 254.5-2.fc40 fedora 31 k tcl s390x 1:8.6.13-1.fc40 fedora 1.1 M tcsh s390x 6.24.10-2.fc39 fedora 474 k tk s390x 1:8.6.13-1.fc40 fedora 1.7 M torque-libs s390x 6.1.3-9.fc39 fedora 191 k tzdata noarch 2023c-4.fc40 fedora 717 k urw-base35-bookman-fonts noarch 20200910-18.fc39 fedora 847 k urw-base35-c059-fonts noarch 20200910-18.fc39 fedora 874 k urw-base35-d050000l-fonts noarch 20200910-18.fc39 fedora 76 k urw-base35-fonts noarch 20200910-18.fc39 fedora 10 k urw-base35-fonts-common noarch 20200910-18.fc39 fedora 21 k urw-base35-gothic-fonts noarch 20200910-18.fc39 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-18.fc39 fedora 795 k urw-base35-nimbus-roman-fonts noarch 20200910-18.fc39 fedora 856 k urw-base35-nimbus-sans-fonts noarch 20200910-18.fc39 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-18.fc39 fedora 974 k urw-base35-standard-symbols-ps-fonts noarch 20200910-18.fc39 fedora 42 k urw-base35-z003-fonts noarch 20200910-18.fc39 fedora 276 k vim-filesystem noarch 2:9.0.2048-1.fc40 fedora 18 k xapian-core-libs s390x 1.4.23-1.fc39 fedora 759 k xml-common noarch 0.6.3-61.fc39 fedora 31 k yaksa s390x 0.2-3.fc37 fedora 9.9 M zlib-ng s390x 2.1.3-2.fc39 fedora 75 k Transaction Summary ============================================================================================ Install 377 Packages Total download size: 428 M Installed size: 1.6 G Downloading Packages: (1/377): MUMPS-common-5.5.1-6.fc40.noarch.rpm 256 kB/s | 831 kB 00:03 (2/377): MUMPS-openmpi-5.5.1-6.fc40.s390x.rpm 681 kB/s | 2.2 MB 00:03 (3/377): MUMPS-mpich-5.5.1-6.fc40.s390x.rpm 637 kB/s | 2.3 MB 00:03 (4/377): hdf5-1.12.1-12.fc40.s390x.rpm 2.0 MB/s | 2.4 MB 00:01 (5/377): hdf5-devel-1.12.1-12.fc40.s390x.rpm 1.1 MB/s | 1.3 MB 00:01 (6/377): hdf5-mpich-1.12.1-12.fc40.s390x.rpm 2.1 MB/s | 2.3 MB 00:01 (7/377): hdf5-mpich-devel-1.12.1-12.fc40.s390x. 1.7 MB/s | 1.2 MB 00:00 (8/377): hypre-mpich-2.24.0-8.fc40.s390x.rpm 2.4 MB/s | 2.1 MB 00:00 (9/377): hdf5-openmpi-devel-1.12.1-12.fc40.s390 757 kB/s | 1.2 MB 00:01 (10/377): hypre-openmpi-2.24.0-8.fc40.s390x.rpm 2.1 MB/s | 2.1 MB 00:00 (11/377): hdf5-openmpi-1.12.1-12.fc40.s390x.rpm 920 kB/s | 2.3 MB 00:02 (12/377): openmpi-5.0.0-1.fc40.s390x.rpm 2.5 MB/s | 1.7 MB 00:00 (13/377): netcdf-cxx4-4.3.1-9.fc40.s390x.rpm 57 kB/s | 86 kB 00:01 (14/377): netcdf-cxx4-devel-4.3.1-9.fc40.s390x. 44 kB/s | 57 kB 00:01 (15/377): openmpi-devel-5.0.0-1.fc40.s390x.rpm 2.5 MB/s | 1.7 MB 00:00 (16/377): petsc-mpich-devel-3.20.0-1.fc40.s390x 1.7 MB/s | 4.5 MB 00:02 (17/377): petsc-openmpi-3.20.0-1.fc40.s390x.rpm 2.9 MB/s | 7.9 MB 00:02 (18/377): petsc-mpich-3.20.0-1.fc40.s390x.rpm 2.1 MB/s | 7.7 MB 00:03 (19/377): pmix-4.2.7-1.fc40.s390x.rpm 613 kB/s | 695 kB 00:01 (20/377): petsc-openmpi-devel-3.20.0-1.fc40.s39 5.4 MB/s | 7.0 MB 00:01 (21/377): prrte-3.0.2-1.fc40.s390x.rpm 53 kB/s | 80 kB 00:01 (22/377): ptscotch-mpich-7.0.4-1.fc40.s390x.rpm 599 kB/s | 452 kB 00:00 (23/377): ptscotch-mpich-devel-7.0.4-1.fc40.s39 84 kB/s | 44 kB 00:00 (24/377): ptscotch-mpich-devel-parmetis-7.0.4-1 13 kB/s | 14 kB 00:01 (25/377): prrte-libs-3.0.2-1.fc40.s390x.rpm 260 kB/s | 520 kB 00:02 (26/377): ptscotch-openmpi-7.0.4-1.fc40.s390x.r 650 kB/s | 453 kB 00:00 (27/377): ptscotch-openmpi-devel-7.0.4-1.fc40.s 87 kB/s | 44 kB 00:00 (28/377): scalapack-common-2.2.0-6.fc40.s390x.r 15 kB/s | 19 kB 00:01 (29/377): scalapack-openmpi-2.2.0-6.fc40.s390x. 1.0 MB/s | 1.9 MB 00:01 (30/377): scalapack-mpich-2.2.0-6.fc40.s390x.rp 783 kB/s | 1.9 MB 00:02 (31/377): superlu_dist-mpich-8.1.2-6.fc40.s390x 408 kB/s | 611 kB 00:01 (32/377): superlu_dist-mpich-devel-8.1.2-6.fc40 79 kB/s | 131 kB 00:01 (33/377): superlu_dist-openmpi-8.1.2-6.fc40.s39 337 kB/s | 616 kB 00:01 (34/377): SuperLUMT64-double-3.1.0-36.fc39.s390 1.1 MB/s | 99 kB 00:00 (35/377): abattis-cantarell-vf-fonts-0.301-10.f 3.8 MB/s | 121 kB 00:00 (36/377): SuperLUMT-common-3.1.0-36.fc39.noarch 128 kB/s | 642 kB 00:05 (37/377): superlu_dist-openmpi-devel-8.1.2-6.fc 21 kB/s | 130 kB 00:06 (38/377): adobe-mappings-cmap-deprecated-202306 6.4 MB/s | 113 kB 00:00 (39/377): annobin-docs-12.28-1.fc40.noarch.rpm 5.7 MB/s | 94 kB 00:00 (40/377): annobin-plugin-gcc-12.28-1.fc40.s390x 15 MB/s | 959 kB 00:00 (41/377): adobe-mappings-pdf-20190401-5.fc39.no 5.6 MB/s | 698 kB 00:00 (42/377): avahi-libs-0.8-24.fc39.s390x.rpm 1.5 MB/s | 67 kB 00:00 (43/377): blosc-1.21.4-2.fc39.s390x.rpm 1.5 MB/s | 49 kB 00:00 (44/377): blosc2-2.10.5-2.fc40.s390x.rpm 7.0 MB/s | 212 kB 00:00 (45/377): adobe-mappings-cmap-20230622-1.fc39.n 456 kB/s | 2.1 MB 00:04 (46/377): cairo-gobject-1.18.0-1.fc40.s390x.rpm 536 kB/s | 18 kB 00:00 (47/377): cairo-1.18.0-1.fc40.s390x.rpm 14 MB/s | 720 kB 00:00 (48/377): chrpath-0.16-21.fc39.s390x.rpm 1.0 MB/s | 30 kB 00:00 (49/377): clang-resource-filesystem-17.0.3-1.fc 918 kB/s | 14 kB 00:00 (50/377): cmake-data-3.27.7-1.fc40.noarch.rpm 51 MB/s | 2.2 MB 00:00 (51/377): cmake-filesystem-3.27.7-1.fc40.s390x. 512 kB/s | 19 kB 00:00 (52/377): cmake-rpm-macros-3.27.7-1.fc40.noarch 1.2 MB/s | 19 kB 00:00 (53/377): cpp-13.2.1-4.fc40.s390x.rpm 63 MB/s | 8.8 MB 00:00 (54/377): cmake-3.27.7-1.fc40.s390x.rpm 30 MB/s | 7.8 MB 00:00 (55/377): clang-libs-17.0.3-1.fc40.s390x.rpm 97 MB/s | 29 MB 00:00 (56/377): crypto-policies-scripts-20230920-1.gi 2.8 MB/s | 115 kB 00:00 (57/377): cups-libs-2.4.7-1.fc40.s390x.rpm 8.4 MB/s | 278 kB 00:00 (58/377): dbus-common-1.14.10-1.fc40.noarch.rpm 957 kB/s | 15 kB 00:00 (59/377): dbus-1.14.10-1.fc40.s390x.rpm 305 kB/s | 8.1 kB 00:00 (60/377): dbus-broker-33-2.fc39.s390x.rpm 4.9 MB/s | 173 kB 00:00 (61/377): default-fonts-core-sans-4.0-9.fc40.no 2.0 MB/s | 32 kB 00:00 (62/377): dejavu-sans-fonts-2.37-21.fc40.noarch 71 MB/s | 1.3 MB 00:00 (63/377): emacs-filesystem-29.1-12.fc40.noarch. 461 kB/s | 7.2 kB 00:00 (64/377): dbus-libs-1.14.10-1.fc40.s390x.rpm 2.3 MB/s | 159 kB 00:00 (65/377): environment-modules-5.3.1-2.fc39.s390 16 MB/s | 703 kB 00:00 (66/377): fftw-3.3.10-7.fc39.s390x.rpm 1.2 MB/s | 40 kB 00:00 (67/377): expat-2.5.0-3.fc39.s390x.rpm 2.0 MB/s | 114 kB 00:00 (68/377): doxygen-1.9.8-1.fc40.s390x.rpm 48 MB/s | 5.6 MB 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Installing : clang-resource-filesystem-17.0.3-1.fc40.noarch 345/377 Installing : clang-libs-17.0.3-1.fc40.s390x 346/377 Installing : annobin-docs-12.28-1.fc40.noarch 347/377 Installing : adobe-mappings-pdf-20190401-5.fc39.noarch 348/377 Installing : libgs-10.01.2-3.fc39.s390x 349/377 Installing : graphviz-9.0.0-2.fc40.s390x 350/377 Running scriptlet: graphviz-9.0.0-2.fc40.s390x 350/377 Installing : SuperLUMT-common-3.1.0-36.fc39.noarch 351/377 Installing : SuperLUMT64-double-3.1.0-36.fc39.s390x 352/377 Installing : sundials-6.6.1-3.fc40.s390x 353/377 Installing : sundials-mpich-6.6.1-3.fc40.s390x 354/377 Installing : sundials-openmpi-6.6.1-3.fc40.s390x 355/377 Installing : netcdf-cxx4-4.3.1-9.fc40.s390x 356/377 Installing : netcdf-cxx4-devel-4.3.1-9.fc40.s390x 357/377 Installing : sundials-openmpi-devel-6.6.1-3.fc40.s390x 358/377 Installing : sundials-mpich-devel-6.6.1-3.fc40.s390x 359/377 Installing : sundials-devel-6.6.1-3.fc40.s390x 360/377 Installing : doxygen-2:1.9.8-1.fc40.s390x 361/377 Installing : python3-sphinx-1:7.1.2-2.fc40.noarch 362/377 Installing : annobin-plugin-gcc-12.28-1.fc40.s390x 363/377 Running scriptlet: annobin-plugin-gcc-12.28-1.fc40.s390x 363/377 Installing : petsc-openmpi-devel-3.20.0-1.fc40.s390x 364/377 Installing : fmt-devel-10.0.0-3.fc39.s390x 365/377 Installing : petsc-mpich-devel-3.20.0-1.fc40.s390x 366/377 Installing : gcc-c++-13.2.1-4.fc40.s390x 367/377 Installing : gcc-plugin-annobin-13.2.1-4.fc40.s390x 368/377 Running scriptlet: gcc-plugin-annobin-13.2.1-4.fc40.s390x 368/377 Installing : gettext-devel-0.22-2.fc39.s390x 369/377 Installing : python3-boutdata-0.1.10-4.fc39.noarch 370/377 Installing : python3-tables-3.8.0-6.fc40.s390x 371/377 Installing : flexiblas-devel-3.3.1-5.fc39.s390x 372/377 Installing : fftw-devel-3.3.10-7.fc39.s390x 373/377 Installing : mpark-variant-devel-1.4.0-10.fc39.s390x 374/377 Installing : systemd-rpm-macros-254.5-2.fc40.noarch 375/377 Installing : m4-1.4.19-7.fc40.s390x 376/377 Installing : chrpath-0.16-21.fc39.s390x 377/377 Running scriptlet: urw-base35-bookman-fonts-20200910-18.fc39.noarch 377/377 Running scriptlet: urw-base35-c059-fonts-20200910-18.fc39.noarch 377/377 Running scriptlet: urw-base35-d050000l-fonts-20200910-18.fc39.noarc 377/377 Running scriptlet: urw-base35-gothic-fonts-20200910-18.fc39.noarch 377/377 Running scriptlet: urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39 377/377 Running scriptlet: urw-base35-nimbus-roman-fonts-20200910-18.fc39.n 377/377 Running scriptlet: urw-base35-nimbus-sans-fonts-20200910-18.fc39.no 377/377 Running scriptlet: urw-base35-p052-fonts-20200910-18.fc39.noarch 377/377 Running scriptlet: urw-base35-standard-symbols-ps-fonts-20200910-18 377/377 Running scriptlet: urw-base35-z003-fonts-20200910-18.fc39.noarch 377/377 Running scriptlet: fontconfig-2.14.2-5.fc40.s390x 377/377 Running scriptlet: crypto-policies-scripts-20230920-1.git570ea89.fc 377/377 Running scriptlet: nss-3.94.0-2.fc40.s390x 377/377 Running scriptlet: chrpath-0.16-21.fc39.s390x 377/377 Installed: MUMPS-common-5.5.1-6.fc40.noarch MUMPS-mpich-5.5.1-6.fc40.s390x MUMPS-openmpi-5.5.1-6.fc40.s390x SuperLUMT-common-3.1.0-36.fc39.noarch SuperLUMT64-double-3.1.0-36.fc39.s390x abattis-cantarell-vf-fonts-0.301-10.fc39.noarch adobe-mappings-cmap-20230622-1.fc39.noarch adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch adobe-mappings-pdf-20190401-5.fc39.noarch annobin-docs-12.28-1.fc40.noarch annobin-plugin-gcc-12.28-1.fc40.s390x avahi-libs-0.8-24.fc39.s390x blosc-1.21.4-2.fc39.s390x blosc2-2.10.5-2.fc40.s390x cairo-1.18.0-1.fc40.s390x cairo-gobject-1.18.0-1.fc40.s390x chrpath-0.16-21.fc39.s390x clang-libs-17.0.3-1.fc40.s390x clang-resource-filesystem-17.0.3-1.fc40.noarch cmake-3.27.7-1.fc40.s390x cmake-data-3.27.7-1.fc40.noarch cmake-filesystem-3.27.7-1.fc40.s390x cmake-rpm-macros-3.27.7-1.fc40.noarch cpp-13.2.1-4.fc40.s390x crypto-policies-scripts-20230920-1.git570ea89.fc40.noarch cups-libs-1:2.4.7-1.fc40.s390x dbus-1:1.14.10-1.fc40.s390x dbus-broker-33-2.fc39.s390x dbus-common-1:1.14.10-1.fc40.noarch dbus-libs-1:1.14.10-1.fc40.s390x default-fonts-core-sans-4.0-9.fc40.noarch dejavu-sans-fonts-2.37-21.fc40.noarch doxygen-2:1.9.8-1.fc40.s390x emacs-filesystem-1:29.1-12.fc40.noarch environment-modules-5.3.1-2.fc39.s390x expat-2.5.0-3.fc39.s390x fftw-3.3.10-7.fc39.s390x fftw-devel-3.3.10-7.fc39.s390x fftw-libs-3.3.10-7.fc39.s390x fftw-libs-double-3.3.10-7.fc39.s390x fftw-libs-long-3.3.10-7.fc39.s390x fftw-libs-single-3.3.10-7.fc39.s390x flexiblas-3.3.1-5.fc39.s390x flexiblas-devel-3.3.1-5.fc39.s390x flexiblas-netlib-3.3.1-5.fc39.s390x flexiblas-netlib64-3.3.1-5.fc39.s390x flexiblas-openblas-openmp-3.3.1-5.fc39.s390x flexiblas-openblas-openmp64-3.3.1-5.fc39.s390x fmt-10.0.0-3.fc39.s390x fmt-devel-10.0.0-3.fc39.s390x fontconfig-2.14.2-5.fc40.s390x fonts-filesystem-1:2.0.5-12.fc39.noarch freetype-2.13.1-2.fc39.s390x fribidi-1.0.13-2.fc39.s390x gc-8.2.2-4.fc39.s390x gcc-13.2.1-4.fc40.s390x gcc-c++-13.2.1-4.fc40.s390x gcc-gfortran-13.2.1-4.fc40.s390x gcc-plugin-annobin-13.2.1-4.fc40.s390x gd-2.3.3-12.fc39.s390x gdk-pixbuf2-2.42.10-5.fc39.s390x gettext-0.22-2.fc39.s390x gettext-common-devel-0.22-2.fc39.noarch gettext-devel-0.22-2.fc39.s390x gettext-envsubst-0.22-2.fc39.s390x gettext-libs-0.22-2.fc39.s390x gettext-runtime-0.22-2.fc39.s390x glib2-2.78.1-1.fc40.s390x glibc-devel-2.38.9000-16.fc40.s390x glibc-headers-s390-2.38.9000-16.fc40.noarch gnutls-3.8.1-1.fc40.s390x google-droid-sans-fonts-20200215-17.fc40.noarch google-noto-fonts-common-20230801-3.fc40.noarch google-noto-sans-vf-fonts-20230801-3.fc40.noarch graphite2-1.3.14-12.fc39.s390x graphviz-9.0.0-2.fc40.s390x groff-base-1.23.0-2.fc39.s390x gts-0.7.6-46.20121130.fc39.s390x guile22-2.2.7-9.fc39.s390x harfbuzz-8.2.1-2.fc40.s390x hdf-libs-4.2.15-14.fc40.s390x hdf5-1.12.1-12.fc40.s390x hdf5-devel-1.12.1-12.fc40.s390x hdf5-mpich-1.12.1-12.fc40.s390x hdf5-mpich-devel-1.12.1-12.fc40.s390x hdf5-openmpi-1.12.1-12.fc40.s390x hdf5-openmpi-devel-1.12.1-12.fc40.s390x highway-1.0.7-1.fc40.s390x hwloc-libs-2.9.3-1.fc40.s390x hypre-mpich-2.24.0-8.fc40.s390x hypre-openmpi-2.24.0-8.fc40.s390x jbig2dec-libs-0.19-10.fc39.s390x jbigkit-libs-2.1-26.fc39.s390x jsoncpp-1.9.5-5.fc39.s390x kernel-headers-6.6.0-0.rc6.git0.1.fc40.s390x kmod-libs-30-6.fc39.s390x lasi-1.1.3-11.fc39.s390x lcms2-2.15-2.fc39.s390x less-643-1.fc40.s390x libICE-1.1.1-1.fc40.s390x libSM-1.2.4-1.fc40.s390x libX11-1.8.7-1.fc40.s390x libX11-common-1.8.7-1.fc40.noarch libXau-1.0.11-4.fc40.s390x libXext-1.3.5-4.fc40.s390x libXft-2.3.8-4.fc40.s390x libXpm-3.5.17-1.fc40.s390x libXrender-0.9.11-4.fc40.s390x libXt-1.3.0-1.fc40.s390x libaec-1.0.6-5.fc39.s390x libaec-devel-1.0.6-5.fc39.s390x libaom-3.7.0-1.fc40.s390x libasan-13.2.1-4.fc40.s390x libatomic-13.2.1-4.fc40.s390x libavif-0.11.1-11.fc39.s390x libb2-0.98.1-9.fc39.s390x libcbor-0.10.2-2.fc39.s390x libcurl-devel-8.4.0-1.fc40.s390x libdatrie-0.2.13-7.fc39.s390x libdav1d-1.2.1-2.fc39.s390x libedit-3.1-48.20230828cvs.fc40.s390x libfabric-1.19.0-1.fc40.s390x libfido2-1.13.0-3.fc39.s390x libgfortran-13.2.1-4.fc40.s390x libgs-10.01.2-3.fc39.s390x libibverbs-48.0-1.fc40.s390x libijs-0.35-19.fc39.s390x libimagequant-4.0.3-1.fc40.s390x libjpeg-turbo-2.1.4-3.fc39.s390x libjxl-1:0.8.2-3.fc40.s390x liblerc-4.0.0-4.fc39.s390x libmpc-1.3.1-3.fc39.s390x libnl3-3.8.0-1.fc40.s390x libpaper-1:2.1.1-1.fc39.s390x libpipeline-1.5.7-3.fc39.s390x libpng-2:1.6.40-1.fc40.s390x libqhull_r-1:8.0.2-2.fc40.s390x libraqm-0.8.0-5.fc39.s390x librdmacm-48.0-1.fc40.s390x librsvg2-2.57.0-3.fc40.s390x libseccomp-2.5.3-6.fc39.s390x libstdc++-devel-13.2.1-4.fc40.s390x libthai-0.1.29-6.fc39.s390x libtiff-4.5.0-3.fc40.s390x libtool-ltdl-2.4.7-8.fc40.s390x libubsan-13.2.1-4.fc40.s390x libuv-1:1.46.0-4.fc40.s390x libwebp-1.3.2-2.fc40.s390x libxcb-1.16-2.fc40.s390x libxcrypt-devel-4.4.36-2.fc39.s390x libxslt-1.1.38-3.fc39.s390x llvm-libs-17.0.3-1.fc40.s390x logrotate-3.21.0-4.fc39.s390x lzo-2.10-9.fc39.s390x m4-1.4.19-7.fc40.s390x make-1:4.4.1-2.fc39.s390x man-db-2.12.0-3.fc40.s390x metis-5.1.0.3-2.fc39.s390x mpark-variant-devel-1.4.0-10.fc39.s390x mpdecimal-2.5.1-7.fc39.s390x mpich-4.1.2-7.fc40.s390x mpich-devel-4.1.2-7.fc40.s390x munge-0.5.15-5.fc39.s390x munge-libs-0.5.15-5.fc39.s390x ncurses-6.4-8.20231001.fc40.s390x netcdf-4.9.0-5.fc38.s390x netcdf-cxx4-4.3.1-9.fc40.s390x netcdf-cxx4-devel-4.3.1-9.fc40.s390x netcdf-devel-4.9.0-5.fc38.s390x netpbm-11.02.00-2.fc39.s390x nettle-3.9.1-2.fc39.s390x nspr-4.35.0-15.fc40.s390x nss-3.94.0-2.fc40.s390x nss-softokn-3.94.0-2.fc40.s390x nss-softokn-freebl-3.94.0-2.fc40.s390x nss-sysinit-3.94.0-2.fc40.s390x nss-util-3.94.0-2.fc40.s390x openblas-0.3.21-6.fc39.s390x openblas-openmp-0.3.21-6.fc39.s390x openblas-openmp64-0.3.21-6.fc39.s390x openjpeg2-2.5.0-5.fc40.s390x openmpi-5.0.0-1.fc40.s390x openmpi-devel-5.0.0-1.fc40.s390x openssh-9.3p1-13.fc40.s390x openssh-clients-9.3p1-13.fc40.s390x orangefs-2.9.8-9.fc39.s390x pango-1.51.0-1.fc40.s390x perl-AutoLoader-5.74-502.fc40.noarch perl-B-1.88-502.fc40.s390x perl-Carp-1.54-500.fc39.noarch perl-Class-Struct-0.68-502.fc40.noarch perl-Data-Dumper-2.188-501.fc39.s390x perl-Digest-1.20-500.fc39.noarch perl-Digest-MD5-2.58-501.fc40.s390x perl-DynaLoader-1.54-502.fc40.s390x perl-Encode-4:3.19-500.fc39.s390x perl-Errno-1.37-502.fc40.s390x perl-Exporter-5.77-500.fc39.noarch perl-Fcntl-1.15-502.fc40.s390x perl-File-Basename-2.86-502.fc40.noarch perl-File-Path-2.18-500.fc39.noarch perl-File-Temp-1:0.231.100-500.fc39.noarch perl-File-stat-1.13-502.fc40.noarch perl-FileHandle-2.05-502.fc40.noarch perl-Getopt-Long-1:2.54-500.fc39.noarch perl-Getopt-Std-1.13-502.fc40.noarch perl-HTTP-Tiny-0.088-3.fc39.noarch perl-IO-1.52-502.fc40.s390x perl-IO-Socket-IP-0.42-1.fc39.noarch perl-IO-Socket-SSL-2.083-3.fc39.noarch perl-IPC-Open3-1.22-502.fc40.noarch perl-MIME-Base64-3.16-500.fc39.s390x perl-Mozilla-CA-20230821-1.fc40.noarch perl-Net-SSLeay-1.92-10.fc39.s390x perl-POSIX-2.13-502.fc40.s390x perl-PathTools-3.89-500.fc39.s390x perl-Pod-Escapes-1:1.07-501.fc40.noarch perl-Pod-Perldoc-3.28.01-501.fc39.noarch perl-Pod-Simple-1:3.45-4.fc39.noarch perl-Pod-Usage-4:2.03-500.fc39.noarch perl-Scalar-List-Utils-5:1.63-500.fc39.s390x perl-SelectSaver-1.02-502.fc40.noarch perl-Socket-4:2.037-3.fc39.s390x perl-Storable-1:3.32-500.fc39.s390x perl-Symbol-1.09-502.fc40.noarch perl-Term-ANSIColor-5.01-501.fc39.noarch perl-Term-Cap-1.18-500.fc39.noarch perl-Text-ParseWords-3.31-500.fc39.noarch perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch perl-Time-Local-2:1.350-3.fc39.noarch perl-URI-5.21-1.fc40.noarch perl-base-2.27-502.fc40.noarch perl-constant-1.33-501.fc39.noarch perl-if-0.61.000-502.fc40.noarch perl-interpreter-4:5.38.0-502.fc40.s390x perl-libnet-3.15-501.fc39.noarch perl-libs-4:5.38.0-502.fc40.s390x perl-locale-1.10-502.fc40.noarch perl-mro-1.28-502.fc40.s390x perl-overload-1.37-502.fc40.noarch perl-overloading-0.02-502.fc40.noarch perl-parent-1:0.241-500.fc39.noarch perl-podlators-1:5.01-500.fc39.noarch perl-vars-1.05-502.fc40.noarch petsc-mpich-3.20.0-1.fc40.s390x petsc-mpich-devel-3.20.0-1.fc40.s390x petsc-openmpi-3.20.0-1.fc40.s390x petsc-openmpi-devel-3.20.0-1.fc40.s390x pixman-0.42.2-2.fc39.s390x pmix-4.2.7-1.fc40.s390x poppler-23.08.0-1.fc39.s390x poppler-data-0.4.11-5.fc39.noarch poppler-glib-23.08.0-1.fc39.s390x procps-ng-4.0.3-5.fc40.s390x prrte-3.0.2-1.fc40.s390x prrte-libs-3.0.2-1.fc40.s390x ptscotch-mpich-7.0.4-1.fc40.s390x ptscotch-mpich-devel-7.0.4-1.fc40.s390x ptscotch-mpich-devel-parmetis-7.0.4-1.fc40.s390x ptscotch-openmpi-7.0.4-1.fc40.s390x ptscotch-openmpi-devel-7.0.4-1.fc40.s390x pyproject-rpm-macros-1.10.0-1.fc40.noarch python-pip-wheel-23.2.1-1.fc39.noarch python-rpm-macros-3.12-4.fc40.noarch python3-3.12.0-2.fc40.s390x python3-appdirs-1.4.4-11.fc39.noarch python3-babel-2.12.1-6.fc40.noarch python3-blosc2-2.2.5-3.fc39.s390x python3-boutdata-0.1.10-4.fc39.noarch python3-boututils-0.1.10-4.fc39.noarch python3-brotli-1.1.0-1.fc40.s390x python3-cairo-1.25.1-1.fc40.s390x python3-certifi-2023.05.07-2.fc39.noarch python3-cftime-1.6.3-1.fc40.s390x python3-charset-normalizer-3.3.1-1.fc40.noarch python3-contourpy-1.1.1-1.fc40.s390x python3-cpuinfo-9.0.0-5.fc39.noarch python3-cycler-0.11.0-9.fc39.noarch python3-cython-3.0.2-1.fc40.s390x python3-dateutil-1:2.8.2-10.fc39.noarch python3-devel-3.12.0-2.fc40.s390x python3-docutils-0.20.1-1.fc40.noarch python3-fonttools-4.43.1-1.fc40.s390x python3-fs-2.4.16-5.fc39.noarch python3-idna-3.4-5.fc40.noarch python3-imagesize-1.4.1-5.fc40.noarch python3-jinja2-3.1.2-6.fc40.noarch python3-kiwisolver-1.4.5-1.fc40.s390x python3-libs-3.12.0-2.fc40.s390x python3-lxml-4.9.3-2.fc39.s390x python3-markupsafe-2.1.3-2.fc39.s390x python3-matplotlib-3.8.0-1.fc40.s390x python3-matplotlib-data-3.8.0-1.fc40.noarch python3-matplotlib-data-fonts-3.8.0-1.fc40.noarch python3-matplotlib-tk-3.8.0-1.fc40.s390x python3-mpmath-1.3.0-3.fc39.noarch python3-msgpack-1.0.6-1.fc40.s390x python3-natsort-7.1.1-10.fc39.noarch python3-ndindex-1.7-9.fc39.s390x python3-netcdf4-1.6.5-1.fc40.s390x python3-numexpr-2.8.5-2.fc40.s390x python3-numpy-1:1.26.0-1.fc40.s390x python3-numpy-f2py-1:1.26.0-1.fc40.s390x python3-olefile-0.46-21.fc39.noarch python3-packaging-23.2-2.fc40.noarch python3-pillow-10.1.0-1.fc40.s390x python3-pillow-tk-10.1.0-1.fc40.s390x python3-pooch-1.5.2-12.fc39.noarch python3-pygments-2.16.1-1.fc40.noarch python3-pyparsing-3.0.9-11.fc39.noarch python3-requests-2.28.2-7.fc40.noarch python3-rpm-generators-14-8.fc40.noarch python3-rpm-macros-3.12-4.fc40.noarch python3-scipy-1.11.1-1.fc39.s390x python3-setuptools-68.2.2-1.fc40.noarch python3-six-1.16.0-12.fc39.noarch python3-snowballstemmer-2.2.0-7.fc39.noarch python3-sphinx-1:7.1.2-2.fc40.noarch python3-sphinx-theme-alabaster-0.7.13-1.fc40.noarch python3-sphinxcontrib-applehelp-1.0.7-1.fc40.noarch python3-sphinxcontrib-devhelp-1.0.2-14.fc39.noarch python3-sphinxcontrib-htmlhelp-2.0.4-1.fc40.noarch python3-sphinxcontrib-jsmath-1.0.1-22.fc39.noarch python3-sphinxcontrib-qthelp-1.0.3-15.fc39.noarch python3-sphinxcontrib-serializinghtml-1.1.9-1.fc40.noarch python3-sympy-1.12-2.fc39.s390x python3-tables-3.8.0-6.fc40.s390x python3-tkinter-3.12.0-2.fc40.s390x python3-urllib3-1.26.18-1.fc40.noarch rav1e-libs-0.6.6-3.fc40.s390x rhash-1.4.3-3.fc39.s390x rpm-mpi-hooks-8-6.fc39.noarch rsvg-pixbuf-loader-2.57.0-3.fc40.s390x scalapack-common-2.2.0-6.fc40.s390x scalapack-mpich-2.2.0-6.fc40.s390x scalapack-openmpi-2.2.0-6.fc40.s390x shared-mime-info-2.3-1.fc40.s390x snappy-1.1.10-2.fc39.s390x suitesparse-5.13.0-4.fc40.s390x suitesparse64-5.13.0-4.fc40.s390x sundials-6.6.1-3.fc40.s390x sundials-devel-6.6.1-3.fc40.s390x sundials-mpich-6.6.1-3.fc40.s390x sundials-mpich-devel-6.6.1-3.fc40.s390x sundials-openmpi-6.6.1-3.fc40.s390x sundials-openmpi-devel-6.6.1-3.fc40.s390x superlu_dist-mpich-1:8.1.2-6.fc40.s390x superlu_dist-mpich-devel-1:8.1.2-6.fc40.s390x superlu_dist-openmpi-1:8.1.2-6.fc40.s390x superlu_dist-openmpi-devel-1:8.1.2-6.fc40.s390x svt-av1-libs-1.4.1-3.fc39.s390x systemd-254.5-2.fc40.s390x systemd-pam-254.5-2.fc40.s390x systemd-rpm-macros-254.5-2.fc40.noarch tcl-1:8.6.13-1.fc40.s390x tcsh-6.24.10-2.fc39.s390x tk-1:8.6.13-1.fc40.s390x torque-libs-6.1.3-9.fc39.s390x tzdata-2023c-4.fc40.noarch urw-base35-bookman-fonts-20200910-18.fc39.noarch urw-base35-c059-fonts-20200910-18.fc39.noarch urw-base35-d050000l-fonts-20200910-18.fc39.noarch urw-base35-fonts-20200910-18.fc39.noarch urw-base35-fonts-common-20200910-18.fc39.noarch urw-base35-gothic-fonts-20200910-18.fc39.noarch urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch urw-base35-p052-fonts-20200910-18.fc39.noarch urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch urw-base35-z003-fonts-20200910-18.fc39.noarch vim-filesystem-2:9.0.2048-1.fc40.noarch xapian-core-libs-1.4.23-1.fc39.s390x xml-common-0.6.3-61.fc39.noarch yaksa-0.2-3.fc37.s390x zlib-devel-1.2.13-5.fc40.s390x zlib-ng-2.1.3-2.fc39.s390x Complete! Finish: build setup for bout++-5.0.0-11.fc40.src.rpm Start: rpmbuild bout++-5.0.0-11.fc40.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1697328000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.I89Y6A + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf BOUT++-v5.0.0.dev10626+gd935fa1ea + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BOUT++-v5.0.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + rm -rf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2659.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2661.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2664.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2678.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/petsc_318_compat.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2693.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/fmt10.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + sed -e 's/html_theme = "sphinx_book_theme"/html_theme = "sphinxdoc"/' -i manual/sphinx/conf.py + rm -rf externalpackages/mpark.variant/ + mkdir -p externalpackages/mpark.variant/include/ + rm -rf tools/pylib/boutdata + rm -rf tools/pylib/boututils ++ find -L tools/pylib/ -type f ++ grep -v _boutcore_build + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/rms.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/read_inp.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/read_cxx.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/pb_present.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/pb_nonlinear.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/pb_draw.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/pb_corral.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/grate2.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/basic_info.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/__init__.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/post_bout/ListDict.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.in + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.cin + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.pyx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/setup.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/scan_enums.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum_inv.pyx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum.pxd.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/other_enums.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.h.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.cxx.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/geninput.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/generate.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_setup.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_helper.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp_openmpi_compat.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.hxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.cxx + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutcpp.pxd.jinja + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/bout_options.pxd + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/backend.py + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/Makefile + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/GENERATION.md + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/CMakeLists.txt + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/_boutpp_build/.gitignore + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/README.md + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/Makefile + for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build) + sed -i '/^#!\//d' tools/pylib/.gitignore + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.zQV1ip + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + export CC=mpicc + CC=mpicc + export CXX=mpicxx + CXX=mpicxx + for mpi in mpich openmpi + mkdir build_mpich + for mpi in mpich openmpi + mkdir build_openmpi + for mpi in mpich openmpi + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-s390x + eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH; MPI_COMPILER=mpich-s390x; export MPI_COMPILER; MANPATH=/usr/share/man/mpich-s390x:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/mpich-s390x; export MPI_INCLUDE; MPI_MAN=/usr/share/man/mpich-s390x; export MPI_MAN; MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH; _LMFILES_=/usr/share/modulefiles/mpi/mpich-s390x; export _LMFILES_; LOADEDMODULES=mpi/mpich-s390x; export LOADEDMODULES; PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich; export MPI_PYTHON3_SITEARCH; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR; MPI_HOME=/usr/lib64/mpich; export MPI_HOME; __MODULES_LMCONFLICT=mpi/mpich-s390x\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SYSCONFIG=/etc/mpich-s390x; export MPI_SYSCONFIG; MPI_SUFFIX=_mpich; export MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH; MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB; PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN; test 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-s390x ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-s390x:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-s390x ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-s390x ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-s390x ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-s390x ++ export LOADEDMODULES ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-s390x&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-s390x ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=mpicc + export CC + CXX=mpicxx + export CXX + /usr/bin/cmake -S . -B build_mpich -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/ -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/mpich-s390x/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.12/site-packages/mpich -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON -- The CXX compiler identification is GNU 13.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/lib64/mpich/bin/mpicxx - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring BOUT++ version 5.0.0 -- Found Python3: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter -- Could NOT find ClangFormat (missing: ClangFormat_BIN) Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'zoidberg' CMake Warning (dev) at CMakeLists.txt:373 (message): 'src/field/generated_fieldops.cxx' will not be regenerated when you make changes to either 'src/field/gen_fieldops.py' or 'src/field/gen_fieldops.jinja'. This is because either Python3 or clang-format is missing (see above messages for more information) or BOUT_GENERATE_FIELDOPS is OFF (current value: OFF). This warning is only important for BOUT++ developers and can otherwise be safely ignored. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Python: /usr/bin/python3.12 (found suitable version "3.12.0", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed -- Found Numpy: /usr/include (found version "1.26.0") -- Found Cython: TRUE (found version "3.0.2") -- Found Bash: /usr/bin/bash (found version "5.2.15") -- Building BOUT++ Python interface -- Found MPI_CXX: /usr/lib64/mpich/bin/mpicxx (found version "4.0") -- Found MPI: TRUE (found version "4.0") -- Enable OpenMP: OFF -- HYPRE support: OFF -- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") -- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0' -- Found PETSc: /usr/include/mpich-s390x/petsc -- PETSc support: ON -- Using external mpark.variant -- Using external fmt -- PVODE support: ON -- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.0") -- Found netCDFCxx version 4.3.1 -- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") -- NetCDF support: ON -- Found FFTW: /usr/lib64/libfftw3.so -- FFTW support: ON -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib64/libflexiblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl -- LAPACK support: ON -- SLEPc support: OFF -- SUNDIALS support: ON -- Found Gettext: /usr/bin/msgmerge (found version "0.22") -- Found Intl: built in to C library -- libuuid not found, using fallback UUID generator -- UUID_SYSTEM_GENERATOR: FALSE -- Enable coverage: OFF -- Git revision: Unknown -- Performing Test HAS_FLAG__Wnull_dereference -- Performing Test HAS_FLAG__Wnull_dereference - Success -- Warning flag is supported by compiler: -Wnull-dereference -- Found negative flag: -Wno-cast-function-type replaced with -Wcast-function-type -- Performing Test HAS_FLAG__Wno_cast_function_type -- Performing Test HAS_FLAG__Wno_cast_function_type - Success -- Warning flag is supported by compiler: -Wno-cast-function-type -- Runtime checking level: CHECK=2 -- Message stack: BOUT_USE_MSGSTACK=ON -- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF -- Signal handling: BOUT_USE_SIGNAL=ON -- Output coloring: BOUT_USE_COLOR=ON -- Field name tracking: BOUT_USE_TRACK=ON -- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF -- Enable backtrace: BOUT_USE_BACKTRACE=ON -- Performing Test HAS_PRETTY_FUNCTION -- Performing Test HAS_PRETTY_FUNCTION - Success -- Setting build type to 'RelWithDebInfo' as none was specified. CMake Deprecation Warning at externalpackages/googletest/CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 13.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/lib64/mpich/bin/mpicc - skipped -- Detecting C compile features -- Detecting C compile features - done CMake Deprecation Warning at externalpackages/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at externalpackages/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter -- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE -- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE -- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC -- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-fci, requirement not met: zoidberg_FOUND -- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS -- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot -- Found Sphinx: /usr/bin/sphinx-build -------------------------------- BOUT++ Configuration Summary -------------------------------- Bundled PVODE support : ON PETSc support : ON SLEPc support : OFF SUNDIALS support : ON HYPRE support : OFF NetCDF support : ON FFTW support : ON LAPACK support : ON OpenMP support : OFF Natural language support : ON ScoreP support : OFF System UUID generator : FALSE Extra debug output : OFF Runtime error check level: 2 Signal handling : ON Output coloring : ON Field name tracking : ON Floating point exceptions: OFF Backtrace enabled : ON RAJA enabled : OFF Umpire enabled : OFF Caliper enabled : OFF CUDA enabled : OFF Metric type : 2D Python API support : ON Sanitizers enabled : None === Python === Make sure that the tools/pylib directory is in your PYTHONPATH e.g. by adding to your ~/.bashrc file export PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib:/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib:$PYTHONPATH *** Now run `cmake --build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich` to compile BOUT++ *** -- Configuring done (4.3s) -- Generating done (0.3s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich + /usr/bin/cmake --build build_mpich -j2 --verbose Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2 /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/pvbbdpre.cpp [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘void* pvode::CVodeMalloc(integer, RhsFn, real, N_Vector, int, int, int, real*, void*, void*, FILE*, int, long int*, real*, void*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:178:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘pvode::integer’ {aka ‘int’} [-Wformat=] 178 | #define CVM "CVodeMalloc-- " | ^ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:19: note: in expansion of macro ‘CVM’ 182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n" | ^~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:496:17: note: in expansion of macro ‘MSG_BAD_N’ 496 | fprintf(fp, MSG_BAD_N, N); | ^~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:28: note: format string is defined here 182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n" | ~~^ | | | long int | %d [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp: In function ‘pvode::integer pvode::gbfa(real**, integer, integer, integer, integer, integer*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp:189:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 189 | if (swap = (l != k)) { | ~~~~~^~~~~~~~~~ In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1826:45, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 1876 | if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp))) | ^ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here 1843 | real del, delp, dcon; | ^~~~ In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1944:28, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1827:41, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 2021 | if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) { | ^ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here 1971 | real del, delp, dcon; | ^~~~ [ 0%] Linking CXX shared library ../../lib/libpvpre.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 429 | #pragma omp parallel for reduction(+: sum) | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 485 | #pragma omp parallel for reduction(+: sum) | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 543 | #pragma omp parallel for reduction(+: sum) | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 565 | #pragma omp parallel for reduction(+: sum) | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 583 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 698 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 714 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 730 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 745 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 761 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 777 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 793 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 809 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 824 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 831 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 837 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 850 | #pragma omp parallel for | cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 0%] Built target pvpre /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable] 189 | N_Vector v, v1, v2; | ^ gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/mofiles.dir/DependInfo.cmake "--color=" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable] 533 | integer N, N_global; | ^~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 0%] Generating locale/es/libbout.gmo, _mo_file_es cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/es/ cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/es/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/es/libbout.po [ 2%] Generating locale/de/libbout.gmo, _mo_file_de cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/de/ cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/de/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/de/libbout.po [ 2%] Generating locale/fr/libbout.gmo, _mo_file_fr cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/fr/ cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/fr/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/fr/libbout.po [ 2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_CN/ cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_CN/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_CN/libbout.po [ 5%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_TW/ cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_TW/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_TW/libbout.po gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 5%] Built target mofiles [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/llnlmath.cpp [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvspgmr.cpp [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/iterativ.cpp /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable] 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized] 328 | for (i=1; i <= krydim; i++) yg[i]=ZERO; | ~~^~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here 161 | int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized] 386 | if (rho < beta) { | ^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~ [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvdiag.cpp [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 82 | if (swap = (l != k)) { | ~~~~~^~~~~~~~~~ [ 11%] Linking CXX shared library ../../lib/libpvode.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 11%] Built target pvode /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 11%] Generating bout++-time.cxx /usr/bin/cmake -P /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/cmake/GenerateDateTimeFile.cmake cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 14%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o [ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/bout++.cxx /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field.cxx.o -MF CMakeFiles/bout++.dir/src/field/field.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field.cxx [ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field2d.cxx [ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/fieldgroup.cxx [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx [ 35%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx.o 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplace/invert_laplace.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplace/invert_laplace.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplace/invert_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/invert_laplace.cxx [ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy/laplacexy.cxx [ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2.cxx [ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx:1: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invert/laplacexy2_hypre.hxx:41:2: warning: #warning LaplaceXY requires Hypre. No LaplaceXY available [-Wcpp] 41 | #warning LaplaceXY requires Hypre. No LaplaceXY available | ^~~~~~~ [ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx [ 38%] Building CXX object 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/laplacexz.cxx [ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/impls/cyclic/cyclic.cxx [ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/invert_parderiv.cxx [ 41%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_factory.cxx [ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_region.cxx [ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 80 | if (mesh->firstY()) { | ~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_factory.hxx:32, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:9, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 83 | if (mesh->lastY()) { | ~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 473 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 | t); | ~~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_data.hxx:51, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:39, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_op.hxx:9, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:6: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 517 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 518 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 978 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 | t); | ~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 1444 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1445 | t); | ~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 2152 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2153 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates_accessor.cxx [ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromfile.cxx [ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromoptions.cxx [ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/difops.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/difops.cxx [ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx: In function ‘FV::communicateFluxes(Field3D&)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:517:15: warning: ‘xout’ may be used uninitialized [-Wmaybe-uninitialized] 517 | mesh->wait(xout); | ~~~~~~~~~~^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:488:20: note: ‘xout’ was declared here 488 | comm_handle xin, xout; | ^~~~ [ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx [ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/index_derivs.cxx In file included from /usr/include/c++/13/bits/shared_ptr.h:53, from /usr/include/c++/13/memory:80, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:36, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/options.hxx:43, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/deriv_store.hxx:42, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:48, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.hxx:8, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:36: In member function ‘std::__shared_ptr, (__gnu_cxx::_Lock_policy)2>::operator bool() const’, inlined from ‘std::operator== >(std::shared_ptr > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14, inlined from ‘Array >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44, inlined from ‘Field3D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field3d.hxx:203:48, inlined from ‘BoutMesh::pack_data(std::vector > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2262:7: /usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference] 1670 | { return _M_ptr != nullptr; } | ^~~~~~ In member function ‘std::__shared_ptr, (__gnu_cxx::_Lock_policy)2>::operator bool() const’, inlined from ‘std::operator== >(std::shared_ptr > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14, inlined from ‘Array >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44, inlined from ‘Field2D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:106:48, inlined from ‘BoutMesh::pack_data(std::vector > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2273:7: /usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference] 1670 | { return _M_ptr != nullptr; } | ^~~~~~ [ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation_xz.cxx [ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -MF CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/sourcex.cxx [ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/adams_bashforth/adams_bashforth.cxx [ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/arkode/arkode.cxx [ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx [ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/euler/euler.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::init()’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:378:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations] 378 | if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:49: /usr/include/mpich-s390x/cvode/cvode_spils.h:43:5: note: declared here 43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS); | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:416:37: warning: ‘int CVSpilsSetPreconditioner(void*, CVSpilsPrecSetupFn, CVSpilsPrecSolveFn)’ is deprecated: use CVodeSetPreconditioner instead [-Wdeprecated-declarations] 416 | if (CVSpilsSetPreconditioner(cvode_mem, nullptr, cvode_pre_shim)) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/mpich-s390x/cvode/cvode_spils.h:49:5: note: declared here 49 | int CVSpilsSetPreconditioner(void *cvode_mem, CVSpilsPrecSetupFn pset, | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:428:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations] 428 | if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/mpich-s390x/cvode/cvode_spils.h:43:5: note: declared here 43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS); | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:442:29: warning: ‘int CVSpilsSetJacTimes(void*, CVSpilsJacTimesSetupFn, CVSpilsJacTimesVecFn)’ is deprecated: use CVodeSetJacTimes instead [-Wdeprecated-declarations] 442 | if (CVSpilsSetJacTimes(cvode_mem, nullptr, cvode_jac) != CV_SUCCESS) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/mpich-s390x/cvode/cvode_spils.h:53:5: note: declared here 53 | int CVSpilsSetJacTimes(void *cvode_mem, CVSpilsJacTimesSetupFn jtsetup, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::run()’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:533:28: warning: ‘int CVSpilsGetNumPrecSolves(void*, long int*)’ is deprecated: use CVodeGetNumPrecSolves instead [-Wdeprecated-declarations] 533 | CVSpilsGetNumPrecSolves(cvode_mem, &temp_long_int); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/mpich-s390x/cvode/cvode_spils.h:64:5: note: declared here 64 | int CVSpilsGetNumPrecSolves(void *cvode_mem, long int *npsolves); | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:535:26: warning: ‘int CVSpilsGetNumLinIters(void*, long int*)’ is deprecated: use CVodeGetNumLinIters instead [-Wdeprecated-declarations] 535 | CVSpilsGetNumLinIters(cvode_mem, &temp_long_int); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/mpich-s390x/cvode/cvode_spils.h:67:5: note: declared here 67 | int CVSpilsGetNumLinIters(void *cvode_mem, long int *nliters); | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx: In member function ‘virtual int IdaSolver::init()’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:199:30: warning: ‘int IDASpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use IDASetLinearSolver instead [-Wdeprecated-declarations] 199 | if (IDASpilsSetLinearSolver(idamem, sun_solver) != IDA_SUCCESS) { | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:45: /usr/include/mpich-s390x/ida/ida_spils.h:44:5: note: declared here 44 | int IDASpilsSetLinearSolver(void *ida_mem, SUNLinearSolver LS); | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:234:36: warning: ‘int IDASpilsSetPreconditioner(void*, IDASpilsPrecSetupFn, IDASpilsPrecSolveFn)’ is deprecated: use IDASetPreconditioner instead [-Wdeprecated-declarations] 234 | if (IDASpilsSetPreconditioner(idamem, nullptr, ida_pre_shim)) { | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/mpich-s390x/ida/ida_spils.h:47:5: note: declared here 47 | int IDASpilsSetPreconditioner(void *ida_mem, IDASpilsPrecSetupFn pset, | ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:679:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 679 | PETSC_NULL, | ^~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:681:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 681 | PETSC_NULL, &Jmf); | ^~~~~~~~~~~~~~~~ [ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 264 | ierr = PetscOptionsGetBool(PETSC_NULL, PETSC_NULL, "-interpolate", &interpolate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 264 | ierr = PetscOptionsGetBool(PETSC_NULL, PETSC_NULL, "-interpolate", &interpolate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:265:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 265 | PETSC_NULL); | ^ ~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 276 | ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-output_name", this->output_name, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:287:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 287 | ierr = SNESMonitorSet(snes, PetscSNESMonitor, this, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:290:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 290 | ierr = TSMonitorSet(ts, PetscMonitor, this, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 402 | ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-J_load", load_file, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:454:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 454 | ierr = MatSeqAIJSetPreallocation(J, prealloc, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 456 | ierr = MatMPIAIJSetPreallocation(J, prealloc, PETSC_NULL, prealloc, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:461:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 461 | ierr = MatSeqBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 463 | ierr = MatMPIBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL, prealloc, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 466 | ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_slowfd", &J_slowfd); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:473:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 473 | ierr = SNESSetJacobian(snes, J, J, SNESComputeJacobianDefault, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 527 | ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_write", &J_write); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 879 | ierr = SNESGetJacobian(snes, &A, &B, PETSC_NULL, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 893 | ierr = SNESGetFunction(snes, &F, PETSC_NULL, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 916 | ierr = SNESGetFunction(snes, &func, PETSC_NULL, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. [ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/power/power.cxx [ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/pvode/pvode.cxx [ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rk3-ssp/rk3-ssp.cxx [ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rk4/rk4.cxx [ 73%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx [ 73%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx [ 73%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra 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-march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkgeneric.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkgeneric.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkgeneric.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rkgeneric/rkgeneric.cxx [ 76%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rkgeneric/rkscheme.cxx [ 76%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/slepc/slepc.cxx [ 76%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx:567:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 567 | PETSC_NULL, | ^~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx:569:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 569 | PETSC_NULL, &Jmf); | ^~~~~~~~~~~~~~~~ [ 79%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/split-rk/split-rk.cxx [ 79%] Building CXX object CMakeFiles/bout++.dir/src/solver/solver.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/solver.cxx.o -MF CMakeFiles/bout++.dir/src/solver/solver.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/solver.cxx [ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutcomm.cxx [ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutexception.cxx [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/derivs.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/derivs.cxx [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 43 | return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:25: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/hyprelib.cxx [ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -MF CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/msg_stack.cxx [ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options.cxx [ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_ini.cxx [ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx In file included from /usr/include/mpich-s390x/ncFile.h:2, from /usr/include/mpich-s390x/netcdf:16, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx:14: /usr/include/mpich-s390x/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ [ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -MF CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/optionsreader.cxx [ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/output.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/output.cxx.o -MF CMakeFiles/bout++.dir/src/sys/output.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/output.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/output.cxx [ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/petsclib.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/petsclib.cxx:29:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 29 | PetscInitialize(pargc, pargv, PETSC_NULL, help); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/range.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/range.cxx.o -MF CMakeFiles/bout++.dir/src/sys/range.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/range.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/range.cxx [ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/slepclib.cxx [ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/timer.cxx.o /usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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lib/libpvode.so.1.0.0 lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl -ldl /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libnetcdf.so /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx: In member function ‘__ct_base ’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx:68:37: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 68 | alldata = new SPT_data[ye - ys + 1]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW 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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/resolve_enum.pxd cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/boutcpp.pxd [ 97%] Generating boutpp.pyx cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutpp.pyx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/boutpp.pyx [100%] Generating helper.cxx cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.cxx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/helper.cxx [100%] Generating helper.h cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.h.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/helper.h [100%] Cythonizing python interface cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/python3.12 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True warning: resolve_enum.pxd:49:21: 'deflt' redeclared warning: resolve_enum.pxd:189:24: 'Standard' redeclared warning: resolve_enum.pxd:223:15: 'Standard' redeclared warning: bout_options.pxd:22:21: Rvalue-reference as function argument not supported warning: bout_options.pxd:24:32: Rvalue-reference as function argument not supported cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/libboutpp.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_s390x_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp [100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/helper.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_s390x_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/helper.cxx In file included from /usr/include/numpy/ndarraytypes.h:1929, from /usr/include/numpy/ndarrayobject.h:12, from /usr/include/numpy/arrayobject.h:5, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:1195: /usr/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ [100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/boutexception_helper.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_s390x_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:40860:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function] 40860 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:9195:10: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized] 9195 | return __pyx_r; | ^~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:8838:12: note: ‘__pyx_r’ was declared here 8838 | CELL_LOC __pyx_r; | ^~~~~~~ In function ‘__pyx_pf_9libboutpp_48bracket(_object*, __pyx_obj_9libboutpp_Field3D*, __pyx_obj_9libboutpp_Field3D*, _object*, _object*)’, inlined from ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:63918:42: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:64012:65: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized] 64012 | __pyx_t_1 = ((PyObject *)__pyx_f_9libboutpp_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2901, __pyx_L1_error) | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:10706:18: note: ‘__pyx_r’ was declared here 10706 | BRACKET_METHOD __pyx_r; | ^~~~~~~ [100%] Linking CXX shared library libboutpp.cpython-312-s390x-linux-gnu.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-312-s390x-linux-gnu.so -o libboutpp.cpython-312-s390x-linux-gnu.so "CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/boutexception_helper.cxx.o" -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib: ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [100%] Built target boutpp.cpython-312-s390x-linux-gnu /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [100%] Building python interface cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-312-s390x-linux-gnu.so /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-312-s390x-linux-gnu.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [100%] Built target boutpp gmake[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles 0 + /usr/bin/cmake --build build_mpich/manual -j2 --verbose Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2 cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual//CMakeFiles/progress.marks cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/gmake -f CMakeFiles/Makefile2 manual/all gmake[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/docs cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/docs Running Sphinx v7.1.2 WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English). breathe module not installed recommonmark module not installed making output directory... done building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 46 source files that are out of date updating environment: [new config] 46 added, 0 changed, 0 removed No mlab available reading sources... [100%] user_docs/variable_init /usr/lib/python3.12/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised: No module named 'enthought' /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation. /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent. /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:56: WARNING: Footnote [1] is not referenced. WARNING: autodoc: failed to import module 'boutpp'; the following exception was raised: No module named 'boutpp' WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised: No module named 'crosslines' WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised: No module named 'tvtk' WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised: No module named 'tvtk' /usr/lib/python3.12/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation. WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'boundary' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'field' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'fieldtracer' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'grid' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'plot' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'poloidal_grid' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'progress' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'rzline' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'zoidberg' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py". /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:447: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:453: ERROR: Unexpected indentation. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:454: WARNING: Block quote ends without a blank line; unexpected unindent. /usr/lib/python3.12/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :noindex: for one of them /usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :noindex: for one of them /usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :noindex: for one of them /usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/running_bout.rst:463: WARNING: Literal block expected; none found. looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... WARNING: unsupported theme option 'repository_url' given WARNING: unsupported theme option 'path_to_docs' given WARNING: unsupported theme option 'use_edit_page_button' given WARNING: unsupported theme option 'use_repository_button' given WARNING: unsupported theme option 'use_issues_button' given WARNING: unsupported theme option 'home_page_in_toc' given done copying assets... copying static files... done copying extra files... done done writing output... [100%] user_docs/variable_init /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator.normal' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected end of definition. [error at 5] numpy.random.Generator.normal -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5] numpy.random.Generator.normal -----^ If the function has a return type: Error in declarator or parameters-and-qualifiers If pointer to member declarator: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator.normal -----^ If declarator-id: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator.normal -----^ /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected end of definition. [error at 5] numpy.random.Generator -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5] numpy.random.Generator -----^ If the function has a return type: Error in declarator or parameters-and-qualifiers If pointer to member declarator: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator -----^ If declarator-id: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator -----^ /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: undefined label: 'random-quick-start' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:148: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:187: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:229: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx' 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Highlighting skipped. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/time_integration.rst:1013: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' generating indices... genindex py-modindex done writing additional pages... search done copying images... [100%] figs/init_balloon.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 118 warnings. The HTML pages are in docs. cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/docs/index.html Generated HTML docs in file:///builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/docs/index.html gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [100%] Built target sphinx-html /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [100%] Built target docs gmake[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles 0 + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-s390x + eval 'unset LD_LIBRARY_PATH; unset MPI_COMPILER; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset MPI_MAN; unset MPI_PYTHON_SITEARCH; unset _LMFILES_; unset LOADEDMODULES; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_FORTRAN_MOD_DIR; unset MPI_HOME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SYSCONFIG; unset MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_PYTHON2_SITEARCH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in mpich openmpi + '[' openmpi = mpich ']' + '[' openmpi = openmpi ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-s390x + eval 'MPI_COMPILER=openmpi-s390x; export MPI_COMPILER; LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH; MANPATH=/usr/share/man/openmpi-s390x:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/openmpi-s390x; export MPI_INCLUDE; MPI_MAN=/usr/share/man/openmpi-s390x; export MPI_MAN; _LMFILES_=/usr/share/modulefiles/mpi/openmpi-s390x; export _LMFILES_; LOADEDMODULES=mpi/openmpi-s390x; export LOADEDMODULES; PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi; export MPI_PYTHON3_SITEARCH; MPI_HOME=/usr/lib64/openmpi; export MPI_HOME; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR; __MODULES_LMALTNAME=mpi/openmpi-s390x\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME; __MODULES_LMCONFLICT=mpi/openmpi-s390x\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SUFFIX=_openmpi; export MPI_SUFFIX; MPI_SYSCONFIG=/etc/openmpi-s390x; export MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB; PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN; test 0;' ++ MPI_COMPILER=openmpi-s390x ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MANPATH=/usr/share/man/openmpi-s390x:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-s390x ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/openmpi-s390x ++ export MPI_MAN ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-s390x ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-s390x ++ export LOADEDMODULES ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-s390x&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-s390x&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-s390x ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=mpicc + export CC + CXX=mpicxx + export CXX + /usr/bin/cmake -S . -B build_openmpi -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/ -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/openmpi-s390x/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON -- The CXX compiler identification is GNU 13.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/lib64/openmpi/bin/mpicxx - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring BOUT++ version 5.0.0 -- Found Python3: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter -- Could NOT find ClangFormat (missing: ClangFormat_BIN) Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'zoidberg' CMake Warning (dev) at CMakeLists.txt:373 (message): 'src/field/generated_fieldops.cxx' will not be regenerated when you make changes to either 'src/field/gen_fieldops.py' or 'src/field/gen_fieldops.jinja'. This is because either Python3 or clang-format is missing (see above messages for more information) or BOUT_GENERATE_FIELDOPS is OFF (current value: OFF). This warning is only important for BOUT++ developers and can otherwise be safely ignored. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Python: /usr/bin/python3.12 (found suitable version "3.12.0", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed -- Found Numpy: /usr/include (found version "1.26.0") -- Found Cython: TRUE (found version "3.0.2") -- Found Bash: /usr/bin/bash (found version "5.2.15") -- Building BOUT++ Python interface -- Found MPI_CXX: /usr/lib64/openmpi/bin/mpicxx (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Enable OpenMP: OFF -- HYPRE support: OFF -- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") -- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0' -- Found PETSc: /usr/include/openmpi-s390x/petsc -- PETSc support: ON -- Using external mpark.variant -- Using external fmt -- PVODE support: ON -- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.0") -- Found netCDFCxx version 4.3.1 -- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") -- NetCDF support: ON -- Found FFTW: /usr/lib64/libfftw3.so -- FFTW support: ON -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib64/libflexiblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl -- LAPACK support: ON -- SLEPc support: OFF -- SUNDIALS support: ON -- Found Gettext: /usr/bin/msgmerge (found version "0.22") -- Found Intl: built in to C library -- libuuid not found, using fallback UUID generator -- UUID_SYSTEM_GENERATOR: FALSE -- Enable coverage: OFF -- Git revision: Unknown -- Performing Test HAS_FLAG__Wnull_dereference -- Performing Test HAS_FLAG__Wnull_dereference - Success -- Warning flag is supported by compiler: -Wnull-dereference -- Found negative flag: -Wno-cast-function-type replaced with -Wcast-function-type -- Performing Test HAS_FLAG__Wno_cast_function_type -- Performing Test HAS_FLAG__Wno_cast_function_type - Success -- Warning flag is supported by compiler: -Wno-cast-function-type -- Runtime checking level: CHECK=2 -- Message stack: BOUT_USE_MSGSTACK=ON -- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF -- Signal handling: BOUT_USE_SIGNAL=ON -- Output coloring: BOUT_USE_COLOR=ON -- Field name tracking: BOUT_USE_TRACK=ON -- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF -- Enable backtrace: BOUT_USE_BACKTRACE=ON -- Performing Test HAS_PRETTY_FUNCTION -- Performing Test HAS_PRETTY_FUNCTION - Success -- Setting build type to 'RelWithDebInfo' as none was specified. CMake Deprecation Warning at externalpackages/googletest/CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 13.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/lib64/openmpi/bin/mpicc - skipped -- Detecting C compile features -- Detecting C compile features - done CMake Deprecation Warning at externalpackages/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at externalpackages/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter -- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE -- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE -- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC -- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-spatial-fci, requirement not met: zoidberg_FOUND -- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS -- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS -- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot -- Found Sphinx: /usr/bin/sphinx-build -------------------------------- BOUT++ Configuration Summary -------------------------------- Bundled PVODE support : ON PETSc support : ON SLEPc support : OFF SUNDIALS support : ON HYPRE support : OFF NetCDF support : ON FFTW support : ON LAPACK support : ON OpenMP support : OFF Natural language support : ON ScoreP support : OFF System UUID generator : FALSE Extra debug output : OFF Runtime error check level: 2 Signal handling : ON Output coloring : ON Field name tracking : ON Floating point exceptions: OFF Backtrace enabled : ON RAJA enabled : OFF Umpire enabled : OFF Caliper enabled : OFF CUDA enabled : OFF Metric type : 2D Python API support : ON Sanitizers enabled : None === Python === Make sure that the tools/pylib directory is in your PYTHONPATH e.g. by adding to your ~/.bashrc file export PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib:/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib:$PYTHONPATH *** Now run `cmake --build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi` to compile BOUT++ *** -- Configuring done (3.9s) -- Generating done (0.3s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi + /usr/bin/cmake --build build_openmpi -j2 --verbose Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2 /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/gmake -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/pvbbdpre.cpp [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘void* pvode::CVodeMalloc(integer, RhsFn, real, N_Vector, int, int, int, real*, void*, void*, FILE*, int, long int*, real*, void*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:178:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘pvode::integer’ {aka ‘int’} [-Wformat=] 178 | #define CVM "CVodeMalloc-- " | ^ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:19: note: in expansion of macro ‘CVM’ 182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n" | ^~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:496:17: note: in expansion of macro ‘MSG_BAD_N’ 496 | fprintf(fp, MSG_BAD_N, N); | ^~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:28: note: format string is defined here 182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n" | ~~^ | | | long int | %d [ 0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp: In function ‘pvode::integer pvode::gbfa(real**, integer, integer, integer, integer, integer*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp:189:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 189 | if (swap = (l != k)) { | ~~~~~^~~~~~~~~~ [ 0%] Linking CXX shared library ../../lib/libpvpre.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1826:45, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 1876 | if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp))) | ^ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here 1843 | real del, delp, dcon; | ^~~~ In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’, inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1944:28, inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1827:41, inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18, inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized] 2021 | if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) { | ^ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here 1971 | real del, delp, dcon; | ^~~~ cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 0%] Built target pvpre /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/mofiles.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/gmake -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 0%] Generating locale/es/libbout.gmo, _mo_file_es cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/es/ cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/es/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/es/libbout.po [ 2%] Generating locale/de/libbout.gmo, _mo_file_de cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/de/ cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/de/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/de/libbout.po [ 2%] Generating locale/fr/libbout.gmo, _mo_file_fr cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/fr/ cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/fr/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/fr/libbout.po [ 2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp [ 2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/zh_CN/ cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/zh_CN/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_CN/libbout.po [ 5%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/zh_TW/ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 429 | #pragma omp parallel for reduction(+: sum) | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 485 | #pragma omp parallel for reduction(+: sum) | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 543 | #pragma omp parallel for reduction(+: sum) | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 565 | #pragma omp parallel for reduction(+: sum) | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 583 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 698 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 714 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 730 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 745 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 761 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 777 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 793 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 809 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 824 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 831 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 837 | #pragma omp parallel for | /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 850 | #pragma omp parallel for | cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/zh_TW/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_TW/libbout.po /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable] 189 | N_Vector v, v1, v2; | ^ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable] 533 | integer N, N_global; | ^~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 5%] Built target mofiles [ 5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/llnlmath.cpp [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvspgmr.cpp [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable] 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~~~~~~~ [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/iterativ.cpp /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized] 328 | for (i=1; i <= krydim; i++) yg[i]=ZERO; | ~~^~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here 161 | int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized] 386 | if (rho < beta) { | ^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here 159 | real s_r0_norm, beta, rotation_product, r_norm, s_product, rho; | ^~~ [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvdiag.cpp [ 8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 82 | if (swap = (l != k)) { | ~~~~~^~~~~~~~~~ [ 11%] Linking CXX shared library ../../lib/libpvode.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 11%] Built target pvode /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 11%] Generating bout++-time.cxx /usr/bin/cmake -P /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/cmake/GenerateDateTimeFile.cmake cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/gmake -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 11%] Building CXX object CMakeFiles/bout++.dir/src/field/field.cxx.o [ 14%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field.cxx.o -MF CMakeFiles/bout++.dir/src/field/field.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field.cxx /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/bout++.cxx [ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field3d.cxx [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field_data.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_data.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_data.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_data.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field_data.cxx [ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field_factory.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx:1: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invert/laplacexy2_hypre.hxx:41:2: warning: #warning LaplaceXY requires Hypre. No LaplaceXY available [-Wcpp] 41 | #warning LaplaceXY requires Hypre. 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx [ 38%] Building CXX object 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CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/invert_parderiv.cxx [ 41%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_factory.cxx [ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_region.cxx [ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 80 | if (mesh->firstY()) { | ~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_factory.hxx:32, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:9, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 83 | if (mesh->lastY()) { | ~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 473 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 | t); | ~~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_data.hxx:51, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:39, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_op.hxx:9, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:6: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 517 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 518 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 978 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 | t); | ~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 1444 | val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz), | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1445 | t); | ~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations] 2152 | val = fg->generate(xnorm, TWOPI * ynorm, | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2153 | TWOPI * (zk - 0.5) / (mesh->LocalNz), t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates.cxx [ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates_accessor.cxx [ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromoptions.cxx [ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/difops.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/difops.cxx [ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx: In function ‘FV::communicateFluxes(Field3D&)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:517:15: warning: ‘xout’ may be used uninitialized [-Wmaybe-uninitialized] 517 | mesh->wait(xout); | ~~~~~~~~~~^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:488:20: note: ‘xout’ was declared here 488 | comm_handle xin, xout; | ^~~~ [ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx [ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/index_derivs.cxx In file included from /usr/include/c++/13/bits/shared_ptr.h:53, from /usr/include/c++/13/memory:80, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:36, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/options.hxx:43, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/deriv_store.hxx:42, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:48, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.hxx:8, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:36: In member function ‘std::__shared_ptr, (__gnu_cxx::_Lock_policy)2>::operator bool() const’, inlined from ‘std::operator== >(std::shared_ptr > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14, inlined from ‘Array >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44, inlined from ‘Field3D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field3d.hxx:203:48, inlined from ‘BoutMesh::pack_data(std::vector > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2262:7: /usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference] 1670 | { return _M_ptr != nullptr; } | ^~~~~~ In member function ‘std::__shared_ptr, (__gnu_cxx::_Lock_policy)2>::operator bool() const’, inlined from ‘std::operator== >(std::shared_ptr > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14, inlined from ‘Array >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44, inlined from ‘Field2D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:106:48, inlined from ‘BoutMesh::pack_data(std::vector > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2273:7: /usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference] 1670 | { return _M_ptr != nullptr; } | ^~~~~~ [ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation_xz.cxx [ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/bilinear_xz.cxx [ 52%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc 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-ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/arkode/arkode.cxx [ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::init()’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:378:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations] 378 | if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:49: /usr/include/openmpi-s390x/cvode/cvode_spils.h:43:5: note: declared here 43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS); | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:416:37: warning: ‘int CVSpilsSetPreconditioner(void*, CVSpilsPrecSetupFn, CVSpilsPrecSolveFn)’ is deprecated: use CVodeSetPreconditioner instead [-Wdeprecated-declarations] 416 | if (CVSpilsSetPreconditioner(cvode_mem, nullptr, cvode_pre_shim)) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/openmpi-s390x/cvode/cvode_spils.h:49:5: note: declared here 49 | int CVSpilsSetPreconditioner(void *cvode_mem, CVSpilsPrecSetupFn pset, | ^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:428:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations] 428 | if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/openmpi-s390x/cvode/cvode_spils.h:43:5: note: declared here 43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS); | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:442:29: warning: ‘int CVSpilsSetJacTimes(void*, CVSpilsJacTimesSetupFn, CVSpilsJacTimesVecFn)’ is deprecated: use CVodeSetJacTimes instead [-Wdeprecated-declarations] 442 | if (CVSpilsSetJacTimes(cvode_mem, nullptr, cvode_jac) != CV_SUCCESS) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/openmpi-s390x/cvode/cvode_spils.h:53:5: note: declared here 53 | int CVSpilsSetJacTimes(void *cvode_mem, CVSpilsJacTimesSetupFn jtsetup, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::run()’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:533:28: warning: ‘int CVSpilsGetNumPrecSolves(void*, long int*)’ is deprecated: use CVodeGetNumPrecSolves instead [-Wdeprecated-declarations] 533 | CVSpilsGetNumPrecSolves(cvode_mem, &temp_long_int); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/openmpi-s390x/cvode/cvode_spils.h:64:5: note: declared here 64 | int CVSpilsGetNumPrecSolves(void *cvode_mem, long int *npsolves); | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:535:26: warning: ‘int CVSpilsGetNumLinIters(void*, long int*)’ is deprecated: use CVodeGetNumLinIters instead [-Wdeprecated-declarations] 535 | CVSpilsGetNumLinIters(cvode_mem, &temp_long_int); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/openmpi-s390x/cvode/cvode_spils.h:67:5: note: declared here 67 | int CVSpilsGetNumLinIters(void *cvode_mem, long int *nliters); | ^~~~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/euler/euler.cxx [ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx [ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:679:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 679 | PETSC_NULL, | ^~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:681:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 681 | PETSC_NULL, &Jmf); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx: In member function ‘virtual int IdaSolver::init()’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:199:30: warning: ‘int IDASpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use IDASetLinearSolver instead [-Wdeprecated-declarations] 199 | if (IDASpilsSetLinearSolver(idamem, sun_solver) != IDA_SUCCESS) { | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:45: /usr/include/openmpi-s390x/ida/ida_spils.h:44:5: note: declared here 44 | int IDASpilsSetLinearSolver(void *ida_mem, SUNLinearSolver LS); | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:234:36: warning: ‘int IDASpilsSetPreconditioner(void*, IDASpilsPrecSetupFn, IDASpilsPrecSolveFn)’ is deprecated: use IDASetPreconditioner instead [-Wdeprecated-declarations] 234 | if (IDASpilsSetPreconditioner(idamem, nullptr, ida_pre_shim)) { | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/openmpi-s390x/ida/ida_spils.h:47:5: note: declared here 47 | int IDASpilsSetPreconditioner(void *ida_mem, IDASpilsPrecSetupFn pset, | ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 264 | ierr = PetscOptionsGetBool(PETSC_NULL, PETSC_NULL, "-interpolate", &interpolate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 264 | ierr = PetscOptionsGetBool(PETSC_NULL, PETSC_NULL, "-interpolate", &interpolate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:265:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 265 | PETSC_NULL); | ^ ~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 276 | ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-output_name", this->output_name, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:287:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 287 | ierr = SNESMonitorSet(snes, PetscSNESMonitor, this, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:290:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 290 | ierr = TSMonitorSet(ts, PetscMonitor, this, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 402 | ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-J_load", load_file, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:454:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 454 | ierr = MatSeqAIJSetPreallocation(J, prealloc, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 456 | ierr = MatMPIAIJSetPreallocation(J, prealloc, PETSC_NULL, prealloc, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:461:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 461 | ierr = MatSeqBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 463 | ierr = MatMPIBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL, prealloc, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 466 | ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_slowfd", &J_slowfd); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:473:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 473 | ierr = SNESSetJacobian(snes, J, J, SNESComputeJacobianDefault, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 527 | ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_write", &J_write); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 879 | ierr = SNESGetJacobian(snes, &A, &B, PETSC_NULL, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 893 | ierr = SNESGetFunction(snes, &F, PETSC_NULL, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. 916 | ierr = SNESGetFunction(snes, &func, PETSC_NULL, PETSC_NULL); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: Use "PETSC_NULLPTR" (since version 3.19.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_19_0. [ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/power/power.cxx [ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/pvode/pvode.cxx [ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rk3-ssp/rk3-ssp.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rk3-ssp/rk3-ssp.cxx [ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rk4/rk4.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rk4/rk4.cxx [ 73%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rkgeneric/impls/cashkarp/cashkarp.cxx [ 73%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rkgeneric/impls/rk4simple/rk4simple.cxx [ 73%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx.o /usr/lib64/openmpi/bin/mpicxx 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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutcomm.cxx [ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutexception.cxx [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/derivs.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference 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Implementations should override the Context version of this function. [-Wdeprecated-declarations] 43 | return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:25: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here 70 | generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) { | ^~~~~~~~ [ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/hyprelib.cxx [ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx In file included from /usr/include/openmpi-s390x/ncFile.h:2, from /usr/include/openmpi-s390x/netcdf:16, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx:14: /usr/include/openmpi-s390x/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable] 18 | static int file_id; | ^~~~~~~ [ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -MF CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/output.cxx.o -MF CMakeFiles/bout++.dir/src/sys/output.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/output.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/output.cxx [ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o /usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING=" -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -DCHECK=2 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/range.cxx.o -MF CMakeFiles/bout++.dir/src/sys/range.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/range.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/range.cxx [ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o /usr/lib64/openmpi/bin/mpicxx 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CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o CMakeFiles/bout++.dir/src/sys/options.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o CMakeFiles/bout++.dir/src/sys/output.cxx.o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o CMakeFiles/bout++.dir/src/sys/range.cxx.o CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o CMakeFiles/bout++.dir/src/sys/timer.cxx.o CMakeFiles/bout++.dir/src/sys/type_name.cxx.o CMakeFiles/bout++.dir/src/sys/utils.cxx.o "CMakeFiles/bout++.dir/bout++-time.cxx.o" -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib: /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/libfmt.so.10.0.0 lib/libpvode.so.1.0.0 lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl -ldl /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libnetcdf.so /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx: In member function ‘__ct_base ’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx:68:37: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 68 | alldata = new SPT_data[ye - ys + 1]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.0.0 lib/libbout++.so.5.0.0 lib/libbout++.so gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 94%] Built target bout++ /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 97%] Generating resolve_enum.pxd cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build [ 97%] Generating boutcpp.pxd cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/resolve_enum.pxd cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/boutcpp.pxd [ 97%] Generating boutpp.pyx cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build [100%] Generating helper.cxx cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutpp.pyx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/boutpp.pyx cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.cxx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/helper.cxx [100%] Generating helper.h cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.h.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/helper.h [100%] Cythonizing python interface cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/python3.12 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True warning: resolve_enum.pxd:49:21: 'deflt' redeclared warning: resolve_enum.pxd:189:24: 'Standard' redeclared warning: resolve_enum.pxd:223:15: 'Standard' redeclared warning: bout_options.pxd:22:21: Rvalue-reference as function argument not supported warning: bout_options.pxd:24:32: Rvalue-reference as function argument not supported cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/helper.cxx.o [100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/libboutpp.cpp.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_s390x_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_s390x_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/helper.cxx In file included from /usr/include/numpy/ndarraytypes.h:1929, from /usr/include/numpy/ndarrayobject.h:12, from /usr/include/numpy/arrayobject.h:5, from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:1195: /usr/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ [100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/boutexception_helper.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_s390x_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:40860:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function] 40860 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:9195:10: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized] 9195 | return __pyx_r; | ^~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:8838:12: note: ‘__pyx_r’ was declared here 8838 | CELL_LOC __pyx_r; | ^~~~~~~ In function ‘__pyx_pf_9libboutpp_48bracket(_object*, __pyx_obj_9libboutpp_Field3D*, __pyx_obj_9libboutpp_Field3D*, _object*, _object*)’, inlined from ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:63918:42: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:64012:65: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized] 64012 | __pyx_t_1 = ((PyObject *)__pyx_f_9libboutpp_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2901, __pyx_L1_error) | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:10706:18: note: ‘__pyx_r’ was declared here 10706 | BRACKET_METHOD __pyx_r; | ^~~~~~~ [100%] Linking CXX shared library libboutpp.cpython-312-s390x-linux-gnu.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-312-s390x-linux-gnu.so -o libboutpp.cpython-312-s390x-linux-gnu.so "CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/boutexception_helper.cxx.o" -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib: ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [100%] Built target boutpp.cpython-312-s390x-linux-gnu /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/gmake -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [100%] Building python interface cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-312-s390x-linux-gnu.so /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-312-s390x-linux-gnu.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [100%] Built target boutpp gmake[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles 0 + /usr/bin/cmake --build build_openmpi/manual -j2 --verbose Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2 cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual//CMakeFiles/progress.marks cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/gmake -f CMakeFiles/Makefile2 manual/all gmake[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/docs cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/docs Running Sphinx v7.1.2 WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English). breathe module not installed recommonmark module not installed making output directory... done building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 46 source files that are out of date updating environment: [new config] 46 added, 0 changed, 0 removed No mlab available reading sources... [100%] user_docs/variable_init /usr/lib/python3.12/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised: No module named 'enthought' /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation. /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent. /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:56: WARNING: Footnote [1] is not referenced. WARNING: autodoc: failed to import module 'boutpp'; the following exception was raised: No module named 'boutpp' WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised: No module named 'crosslines' WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised: No module named 'tvtk' WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised: No module named 'tvtk' /usr/lib/python3.12/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation. WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised: No module named 'past' WARNING: autodoc: failed to import module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'boundary' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'field' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'fieldtracer' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'grid' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'plot' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'poloidal_grid' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'progress' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'rzline' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' WARNING: autodoc: failed to import module 'zoidberg' from module 'zoidberg'; the following exception was raised: No module named 'zoidberg' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py". /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:447: WARNING: Title underline too short. Working with an active ``conda`` environment ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:453: ERROR: Unexpected indentation. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:454: WARNING: Block quote ends without a blank line; unexpected unindent. /usr/lib/python3.12/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :noindex: for one of them /usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :noindex: for one of them /usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :noindex: for one of them /usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/running_bout.rst:463: WARNING: Literal block expected; none found. looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... WARNING: unsupported theme option 'repository_url' given WARNING: unsupported theme option 'path_to_docs' given WARNING: unsupported theme option 'use_edit_page_button' given WARNING: unsupported theme option 'use_repository_button' given WARNING: unsupported theme option 'use_issues_button' given WARNING: unsupported theme option 'home_page_in_toc' given done copying assets... copying static files... done copying extra files... done done writing output... [100%] user_docs/variable_init /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator.normal' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected end of definition. [error at 5] numpy.random.Generator.normal -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5] numpy.random.Generator.normal -----^ If the function has a return type: Error in declarator or parameters-and-qualifiers If pointer to member declarator: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator.normal -----^ If declarator-id: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator.normal -----^ /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator' Error in cross-reference. If shorthand ref: Invalid C++ declaration: Expected end of definition. [error at 5] numpy.random.Generator -----^ If full function ref: Error when parsing function declaration. If the function has no return type: Error in declarator or parameters-and-qualifiers Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5] numpy.random.Generator -----^ If the function has a return type: Error in declarator or parameters-and-qualifiers If pointer to member declarator: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator -----^ If declarator-id: Invalid C++ declaration: Expected identifier in nested name. [error at 5] numpy.random.Generator -----^ /usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: undefined label: 'random-quick-start' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:148: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:187: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:229: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx' /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/output_and_post.rst:581: WARNING: Could not lex literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica". Highlighting skipped. /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/time_integration.rst:1013: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx' generating indices... genindex py-modindex done writing additional pages... search done copying images... [100%] figs/init_balloon.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 118 warnings. The HTML pages are in docs. cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/docs/index.html Generated HTML docs in file:///builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/docs/index.html gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [100%] Built target sphinx-html /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/gmake -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [100%] Built target docs gmake[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles 0 + '[' openmpi = mpich ']' + '[' openmpi = openmpi ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-s390x + eval 'unset MPI_COMPILER; unset LD_LIBRARY_PATH; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset MPI_MAN; unset _LMFILES_; unset LOADEDMODULES; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_HOME; unset MPI_FORTRAN_MOD_DIR; unset __MODULES_LMALTNAME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SUFFIX; unset MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Ba38YY + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x '!=' / ']' + rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x ++ dirname /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + for mpi in mpich openmpi + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-s390x + eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH; MPI_COMPILER=mpich-s390x; export MPI_COMPILER; MANPATH=/usr/share/man/mpich-s390x:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/mpich-s390x; export MPI_INCLUDE; MPI_MAN=/usr/share/man/mpich-s390x; export MPI_MAN; MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH; _LMFILES_=/usr/share/modulefiles/mpi/mpich-s390x; export _LMFILES_; LOADEDMODULES=mpi/mpich-s390x; export LOADEDMODULES; PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich; export MPI_PYTHON3_SITEARCH; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR; MPI_HOME=/usr/lib64/mpich; export MPI_HOME; __MODULES_LMCONFLICT=mpi/mpich-s390x\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SYSCONFIG=/etc/mpich-s390x; export MPI_SYSCONFIG; MPI_SUFFIX=_mpich; export MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH; MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB; PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN; test 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-s390x ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-s390x:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-s390x ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-s390x ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-s390x ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-s390x ++ export LOADEDMODULES ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-s390x&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-s390x ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection' + DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x + /usr/bin/cmake --install build_mpich -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-s390x-linux-gnu.so -- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-s390x-linux-gnu.so" to "" -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/python3.12/site-packages/mpich/boutpp/__init__.py -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/mpich/lib/libpvode.so.1.0.0 -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/mpich/lib/libpvode.so -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/mpich/lib/libpvpre.so.1.0.0 -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/mpich/lib/libpvpre.so -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++ -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/nvector.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/vector.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/spgmr.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/smalldense.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/pvbbdpre.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/llnltyps.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/llnlmath.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/iterativ.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/cvspgmr.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/cvode.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/cvdiag.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/pvode/band.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/mpich/lib/cmake/PVODE/PVODETargets.cmake -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/mpich/lib/cmake/PVODE/PVODETargets-relwithdebinfo.cmake -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/locale/es/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/locale/de/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/locale/fr/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/mpich/lib/libbout++.so.5.0.0 -- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/mpich/lib/libbout++.so.5.0.0" to "" -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/mpich/lib/libbout++.so -- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++ -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/where.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/vector3d.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/vector2d.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/vecops.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/utils.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/unused.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/stencils.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/sourcex.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/smoothing.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/parallel_boundary_region.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/parallel_boundary_op.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/output.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/optionsreader.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/options_netcdf.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/options.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/multiostream.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/msg_stack.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/mask.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/lapack_routines.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/invert_parderiv.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/invert_laplace.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/interpolation_z.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/interpolation_xz.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/interpolation.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/initialprofiles.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/gyro_average.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/globals.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/fieldperp.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/field_factory.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/field_data.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/field3d.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/field2d.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/field.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/fft.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/difops.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/derivs.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/dcomplex.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/cyclic_reduction.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/boutexception.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/boutcomm.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout_types.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/petsclib.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/invertable_operator.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/utils.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/field.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sundials_backports.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/boutcomm.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/output.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/where.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/vector3d.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/vector2d.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/vecops.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/unused.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/traits.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/template_combinations.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sys -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sys/variant.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sys/uncopyable.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sys/type_name.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sys/timer.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sys/range.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sys/gettext.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sys/generator_context.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sys/expressionparser.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/surfaceiter.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/stencils.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/sourcex.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/solverfactory.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/solver.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/snb.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/smoothing.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/slepclib.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/mpich-s390x/bout++/bout/single_index_ops.hxx -- Installing: 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RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout) + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/mpich/lib/libbout++.so.5.0.0 /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/mpich/lib/libbout++.so.5.0.0: RUNPATH=/usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/mpich/lib/libbout++.so.5.0.0: new RUNPATH: /usr/lib64/mpich/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout) + chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-s390x-linux-gnu.so /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-s390x-linux-gnu.so: RUNPATH=:/usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-s390x-linux-gnu.so: new RUNPATH: /usr/lib64/mpich/lib + rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/bout++ + mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/modulefiles/bout++ + cat + DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x + /usr/bin/cmake --install build_mpich/manual -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++/ -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//objects.inv -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//searchindex.js -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_images -- Installing: 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Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/sphinx_highlight.js -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/pygments.css + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-s390x + eval 'unset LD_LIBRARY_PATH; unset MPI_COMPILER; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset MPI_MAN; unset MPI_PYTHON_SITEARCH; unset _LMFILES_; unset LOADEDMODULES; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_FORTRAN_MOD_DIR; unset MPI_HOME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SYSCONFIG; unset MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_PYTHON2_SITEARCH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in mpich openmpi + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-s390x + eval 'MPI_COMPILER=openmpi-s390x; export MPI_COMPILER; LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH; MANPATH=/usr/share/man/openmpi-s390x:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/openmpi-s390x; export MPI_INCLUDE; MPI_MAN=/usr/share/man/openmpi-s390x; export MPI_MAN; _LMFILES_=/usr/share/modulefiles/mpi/openmpi-s390x; export _LMFILES_; LOADEDMODULES=mpi/openmpi-s390x; export LOADEDMODULES; PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi; export MPI_PYTHON3_SITEARCH; MPI_HOME=/usr/lib64/openmpi; export MPI_HOME; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR; __MODULES_LMALTNAME=mpi/openmpi-s390x\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME; __MODULES_LMCONFLICT=mpi/openmpi-s390x\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SUFFIX=_openmpi; export MPI_SUFFIX; MPI_SYSCONFIG=/etc/openmpi-s390x; export MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB; PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN; test 0;' ++ MPI_COMPILER=openmpi-s390x ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MANPATH=/usr/share/man/openmpi-s390x:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-s390x ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/openmpi-s390x ++ export MPI_MAN ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-s390x ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-s390x ++ export LOADEDMODULES ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-s390x&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-s390x&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-s390x ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x + /usr/bin/cmake --install build_openmpi -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-s390x-linux-gnu.so -- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-s390x-linux-gnu.so" to "" -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/python3.12/site-packages/openmpi/boutpp/__init__.py -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/openmpi/lib/libpvode.so.1.0.0 -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/openmpi/lib/libpvode.so -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/openmpi/lib/libpvpre.so.1.0.0 -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/openmpi/lib/libpvpre.so -- Installing: 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/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/pvode/llnlmath.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/pvode/iterativ.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/pvode/cvspgmr.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/pvode/cvode.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/pvode/cvdiag.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/pvode/band.h -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/openmpi/lib/cmake/PVODE/PVODETargets.cmake -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/openmpi/lib/cmake/PVODE/PVODETargets-relwithdebinfo.cmake -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/locale/es/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/locale/de/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/locale/fr/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/openmpi/lib/libbout++.so.5.0.0 -- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/openmpi/lib/libbout++.so.5.0.0" to "" -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/openmpi/lib/libbout++.so -- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++ -- Installing: 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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/parallel_boundary_region.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/parallel_boundary_op.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/output.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/optionsreader.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/options_netcdf.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/options.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/multiostream.hxx -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/include/openmpi-s390x/bout++/msg_stack.hxx -- Installing: 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/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/openmpi/lib/libbout++.so: RUNPATH=:/usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/openmpi/lib/libbout++.so: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout) + chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/openmpi/lib/libbout++.so.5.0.0 /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/openmpi/lib/libbout++.so.5.0.0: RUNPATH=/usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x//usr/lib64/openmpi/lib/libbout++.so.5.0.0: new RUNPATH: /usr/lib64/openmpi/lib + for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout) + chrpath -r /usr/lib64/openmpi/lib 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/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/contents.png -- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/navigation.png -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/sphinxdoc.css -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/basic.css -- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/doctools.js -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/documentation_options.js -- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/file.png -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/language_data.js -- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/minus.png -- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/plus.png -- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/searchtools.js -- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/sphinx_highlight.js -- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++//_static/pygments.css + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-s390x + eval 'unset MPI_COMPILER; unset LD_LIBRARY_PATH; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset MPI_MAN; unset _LMFILES_; unset LOADEDMODULES; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_HOME; unset MPI_FORTRAN_MOD_DIR; unset __MODULES_LMALTNAME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SUFFIX; unset MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + /usr/lib/rpm/find-lang.sh /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x libbout + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 5.0.0-11.fc40 --unique-debug-suffix -5.0.0-11.fc40.s390x --unique-debug-src-base bout++-5.0.0-11.fc40.s390x --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea find-debuginfo: starting Extracting debug info from 8 files DWARF-compressing 8 files sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/bout++-5.0.0-11.fc40.s390x 21358 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/lib64/openmpi/bin/bout-config from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/openmpi/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-log-color from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/openmpi/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/openmpi/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/openmpi/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-config from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/mpich/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-log-color from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/mpich/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mpich/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3 mangling shebang in /usr/lib64/mpich/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib/debug/usr/lib64/python3.12 using python3.12 Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/lib64/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.TJ6Hu4 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + fail=0 + fail=0 + for mpi in mpich openmpi + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/mpich-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/mpich-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-s390x + eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH; MPI_COMPILER=mpich-s390x; export MPI_COMPILER; MANPATH=/usr/share/man/mpich-s390x:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/mpich-s390x; export MPI_INCLUDE; MPI_MAN=/usr/share/man/mpich-s390x; export MPI_MAN; MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH; _LMFILES_=/usr/share/modulefiles/mpi/mpich-s390x; export _LMFILES_; LOADEDMODULES=mpi/mpich-s390x; export LOADEDMODULES; PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich; export MPI_PYTHON3_SITEARCH; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR; MPI_HOME=/usr/lib64/mpich; export MPI_HOME; __MODULES_LMCONFLICT=mpi/mpich-s390x\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SYSCONFIG=/etc/mpich-s390x; export MPI_SYSCONFIG; MPI_SUFFIX=_mpich; export MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH; MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB; PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN; test 0;' ++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib ++ export LD_LIBRARY_PATH ++ MPI_COMPILER=mpich-s390x ++ export MPI_COMPILER ++ MANPATH=/usr/share/man/mpich-s390x:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/mpich-s390x ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/mpich-s390x ++ export MPI_MAN ++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON_SITEARCH ++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-s390x ++ export _LMFILES_ ++ LOADEDMODULES=mpi/mpich-s390x ++ export LOADEDMODULES ++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich ++ export MPI_PYTHON3_SITEARCH ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich ++ export MPI_FORTRAN_MOD_DIR ++ MPI_HOME=/usr/lib64/mpich ++ export MPI_HOME ++ __MODULES_LMCONFLICT='mpi/mpich-s390x&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich ~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea ++ export __MODULES_SHARE_MANPATH ++ MPI_SYSCONFIG=/etc/mpich-s390x ++ export MPI_SYSCONFIG ++ MPI_SUFFIX=_mpich ++ export MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich' ++ export MPI_PYTHON2_SITEARCH ++ MPI_LIB=/usr/lib64/mpich/lib ++ export MPI_LIB ++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/mpich/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection' + pushd build_mpich + export OMPI_MCA_rmaps_base_oversubscribe=yes + OMPI_MCA_rmaps_base_oversubscribe=yes + export HDF5_USE_FILE_LOCKING=FALSE + HDF5_USE_FILE_LOCKING=FALSE + export BOUT_TEST_TIMEOUT=15m + BOUT_TEST_TIMEOUT=15m + sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest #!/bin/bash # Cores: 3 make || exit test -z $MPIRUN && MPIRUN='mpirun -np' # Kill the test after 3 seconds, if it hasn't already exited OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization e=$? if test $e -ne 0 then echo "The test failed. That can be caused by a timeout." echo "If this test is run on high load, it may fail occasionally." echo "The load is:" uptime fi exit $e + make -j2 build-check /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 build-check make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles 70 make -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 0%] Built target pvpre make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" [ 2%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 2%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-all.cc make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y/wave.cxx [ 42%] Linking CXX executable wave cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Built target MMS-wave-1d-y make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection/advection.cxx [ 42%] Linking CXX executable advection cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Built target MMS-advection make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion/diffusion.cxx [ 42%] Linking CXX shared library ../../../../../lib/libgtest.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.10.0 -o ../../../../../lib/libgtest.so.1.10.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" [ 42%] Linking CXX executable cyto cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Built target MMS-diffusion make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 44%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d/wave.cxx [ 44%] Linking CXX executable wave cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 44%] Built target gtest make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 44%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 44%] Built target MMS-wave-1d make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 47%] Built target boutpp.cpython-312-s390x-linux-gnu make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 48%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace/boutexcept.cxx [ 48%] Linking CXX executable boutexcept cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 48%] Built target test-backtrace make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 48%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler/test_beuler.cxx [ 50%] Linking CXX executable test_yupdown_weights cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 50%] Built target test-yupdown-weights make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 50%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx:1: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/options.hxx:3:2: warning: #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix [-Wcpp] 3 | #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix | ^~~~~~~ [ 50%] Linking CXX executable test_beuler cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 50%] Built target test_beuler make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 51%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args/command-args.cxx [ 51%] Linking CXX executable test-bout-override-default-option cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 51%] Built target test-bout-override-default-option make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 51%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications/test-communications.cxx [ 51%] Linking CXX executable command-args cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 51%] Built target test-command-args make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 51%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx [ 52%] Linking CXX executable test-coordinates-initialization cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl [ 52%] Linking CXX executable test-communications cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 52%] Built target test-coordinates-initialization make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 52%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic/test_cyclic.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 52%] Built target test-communications make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 52%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2 && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2/test_delp2.cxx [ 52%] Linking CXX executable test_delp2 cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2 -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl [ 52%] Linking CXX executable test_cyclic cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 52%] Built target test-delp2 make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 52%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade/test-datafile-facade.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 52%] Built target test-cyclic make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 52%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability/2fluid.cxx [ 54%] Linking CXX executable test-datafile-facade cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 54%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 54%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered/2fluid.cxx [ 54%] Linking CXX executable 2fluid cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl [ 55%] Linking CXX executable 2fluid cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 55%] Built target test-drift-instability make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 55%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx [ 55%] Linking CXX executable test_fieldgroupcomm cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 55%] Built target test-drift-instability-staggered make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 55%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata/test_griddata.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 55%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 55%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx [ 57%] Linking CXX executable test_griddata cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl [ 57%] Linking CXX executable test_griddata cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 57%] Built target test-griddata make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 57%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro/test_gyro.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 57%] Built target test-griddata-yboundary-guards make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 57%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial/test_initial.cxx [ 57%] Linking CXX executable test_initial cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl [ 58%] Linking CXX executable test_gyro cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 58%] Built target test-initial make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 58%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability/2fluid.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 58%] Built target test-gyro make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 58%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate/test_interpolate.cxx [ 58%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl [ 60%] Linking CXX executable 2fluid cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 60%] Built target test-interpolate make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 60%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z/test_interpolate.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 60%] Built target test-interchange-instability make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 61%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:4: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx: In instantiation of ‘PetscErrorCode bout::inversion::InvertableOperator::setup() [with T = Field3D; PetscErrorCode = int]’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:51:19: required from here /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:44: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 225 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 225 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 231 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 231 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 262 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 262 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 262 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 262 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 265 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 265 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 270 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 270 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ [ 61%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 61%] Built target test-interpolate-z make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 61%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar/test_invpar.cxx [ 61%] Linking CXX executable invertable_operator cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 61%] Built target test-invertable-operator make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 62%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace/test_laplace.cxx [ 62%] Linking CXX executable test_invpar cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 62%] Built target test-invpar make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 62%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx [ 62%] Linking CXX executable test_laplace cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 62%] Built target test-laplace make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 64%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx [ 64%] Linking CXX executable test-laplace3d cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 64%] Built target test-laplace-petsc3d make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 64%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short/test-laplacexy.cxx [ 64%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 64%] Built target test-laplacexy-fv make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 65%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz/test-laplacexz.cxx [ 65%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 65%] Built target test-laplacexy-short make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 65%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx [ 65%] Linking CXX executable test-laplacexz cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 65%] Built target test-laplacexz make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 67%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx [ 67%] Linking CXX executable test_multigrid_laplace cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl [ 67%] Linking CXX executable test_naulin_laplace cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 67%] Built target test-multigrid-laplace make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 67%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf/test-options-netcdf.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 67%] Built target test-naulin-laplace make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 68%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx [ 68%] Linking CXX executable test-options-netcdf cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 68%] Built target test-options-netcdf make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 68%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx [ 68%] Linking CXX executable test_petsc_laplace cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 68%] Built target test-petsc-laplace make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 70%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io/test-restart-io.cxx [ 70%] Linking CXX executable test_petsc_laplace_MAST_grid cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 70%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 70%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting/test_restarting.cxx [ 70%] Linking CXX executable test-restart-io cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 70%] Built target test-restart-io make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 70%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth/test_smooth.cxx [ 70%] Linking CXX executable test_restarting cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 70%] Built target test-restarting make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 70%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb/test_snb.cxx [ 71%] Linking CXX executable test_smooth cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 71%] Built target test-smooth make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 71%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver/test_solver.cxx [ 71%] Linking CXX executable test_snb cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl [ 72%] Linking CXX executable test_solver cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 72%] Built target test-snb make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 72%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash/squash.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 72%] Built target test-solver make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 72%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck/test_stopCheck.cxx [ 72%] Linking CXX executable squash cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 72%] Built target test-squash make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 72%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file/test_stopCheck.cxx [ 74%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 74%] Built target test-stopCheck make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 74%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift/test-twistshift.cxx [ 74%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl [ 75%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 75%] Built target test-twistshift make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 75%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered/test-twistshift.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 75%] Built target test-stopCheck-file make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 75%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec/testVec.cxx [ 75%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 75%] Built target test-twistshift-staggered make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 75%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown/test_yupdown.cxx [ 77%] Linking CXX executable testVec cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 77%] Built target test-vec make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 77%] Built target build-check-mms-tests make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 77%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/src/gmock-all.cc [ 77%] Linking CXX executable test_yupdown cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 77%] Built target test-yupdown make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 77%] Building python interface cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-312-s390x-linux-gnu.so /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-312-s390x-linux-gnu.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 77%] Built target boutpp make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 77%] Built target build-check-integrated-tests [ 78%] Linking CXX shared library ../../../../../lib/libgmock.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.10.0 -o ../../../../../lib/libgmock.so.1.10.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o" -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../../../lib/libgtest.so.1.10.0 cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 78%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx [ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable] 29 | bout::HypreLib hyprelib{}; | ^~~~~~~~ [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field2d.cxx [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field3d.cxx [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field_factory.cxx [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_fieldgroup.cxx [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_fieldperp.cxx [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_initialprofiles.cxx [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ 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-ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_vector2d.cxx [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o -MF CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/include/bout/test_petsc_indexer.cxx [ 85%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o -MF CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/include/bout/test_petsc_matrix.cxx [ 85%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ 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tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem 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tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o -MF CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o.d -o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/include/bout/test_template_combinations.cxx [ 87%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/include/test_mask.cxx.o -MF CMakeFiles/serial_tests.dir/include/test_mask.cxx.o.d -o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/include/test_mask.cxx [ 88%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o -MF CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o.d -o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/invert/test_fft.cxx [ 90%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o -MF CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o.d -o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/invert/laplace/test_laplace_petsc3damg.cxx [ 90%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 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tests/unit/CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem 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tests/unit/CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/test_extras.cxx.o -MF CMakeFiles/serial_tests.dir/test_extras.cxx.o.d -o CMakeFiles/serial_tests.dir/test_extras.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/test_extras.cxx [100%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o CMakeFiles/serial_tests.dir/field/test_where.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_array.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_deriv_store.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_generic_factory.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_macro_for_each.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_monitor.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_vector.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../lib/libgmock.so.1.10.0 ../../lib/libbout++.so.5.0.0 ../../lib/libgtest.so.1.10.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.6.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.6.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.6.1 -ldl /usr/bin/ld: /tmp/ccfT42NJ.ltrans108.ltrans.o: in function `testing::internal::TestFactoryImpl::CreateTest()': /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/sys/test_options_netcdf.cxx:28:(.text+0x2332): warning: the use of `tmpnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [100%] Built target 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'/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [100%] Built target build-check make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' + SEGFAULT_SIGNALS=segv + make check /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0 make -f 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'/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 2%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Built target MMS-wave-1d-y make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Built target MMS-advection make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 42%] Built target MMS-diffusion make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 44%] Built target MMS-wave-1d make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' [ 44%] Built target build-check-mms-tests make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' ctest -R MMS- --output-on-failure Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich Start 52: MMS-diffusion 1/7 Test #52: MMS-diffusion .................... Passed 3.77 sec Start 53: MMS-wave-1d 2/7 Test #53: MMS-wave-1d ...................... Passed 3.02 sec Start 54: MMS-wave-1d-y 3/7 Test #54: MMS-wave-1d-y .................... Passed 2.94 sec Start 55: MMS-bracket 4/7 Test #55: MMS-bracket ...................... Passed 0.25 sec Start 56: MMS-derivatives3 5/7 Test #56: MMS-derivatives3 ................. Passed 0.75 sec Start 57: MMS-shiftedmetricinterp 6/7 Test #57: MMS-shiftedmetricinterp .......... Passed 5.20 sec Start 58: MMS-upwinding3 7/7 Test #58: MMS-upwinding3 ................... Passed 1.21 sec 100% tests passed, 0 tests failed out of 7 Total Test time (real) = 17.15 sec make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' Built target check-mms-tests make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' Built target gtest make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' Built target build-check-unit-tests make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' ctest -R serial_tests --output-on-failure Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich Start 1: serial_tests 1/1 Test #1: serial_tests .....................***Failed 5.12 sec Running main() from bout_test_main.cxx [WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out. [WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out. [WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out. Timer::resetTime Timer name | Total time (s) | % of top | Hits | Mean time/hit (s) -------------------|----------------|----------|------|------------------ one | 0.003261342 | 1.00 | 1 | 0.003261342 two | 0.002174619 | 0.67 | 2 | 0.0010873095 18 characters long | 1.21e-07 | 0.00 | 1 | 1.21e-07 Calculating differential geometry terms Option ddx:first = C2 () Option ddx:upwind = C2 () Option ddy:first = C2 () Option ddy:upwind = C2 () Option ddz:first = C2 () Option ddz:upwind = C2 () Option ddy:first = C2 () Option ddy:upwind = C2 () Option ddx:first = C2 () Option ddx:upwind = C2 () Option ddy:first = C2 () Option ddy:upwind = C2 () Option ddz:first = C2 () Option ddz:upwind = C2 () Option ddy:first = C2 () Option ddy:upwind = C2 () /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx:238: Failure Expected: getUniform(nonuniform) throws an exception of type BoutException. Actual: it throws fmt::v10::format_error with description "argument not found". [ FAILED ] FieldTest.GetUniformFalse3D (1 ms) /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx:251: Failure Expected: getUniform(nonuniform) throws an exception of type BoutException. Actual: it throws fmt::v10::format_error with description "argument not found". [ FAILED ] FieldTest.GetUniformFalse2D (0 ms) [==========] 2158 tests from 141 test suites ran. (5002 ms total) [ PASSED ] 2156 tests. 0% tests passed, 1 tests failed out of 1 Total Test time (real) = 5.13 sec The following tests FAILED: 1 - serial_tests (Failed) Errors while running CTest make[3]: *** [CMakeFiles/check-unit-tests.dir/build.make:73: CMakeFiles/check-unit-tests] Error 8 make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[2]: *** [CMakeFiles/Makefile2:2743: CMakeFiles/check-unit-tests.dir/all] Error 2 make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make[1]: *** [CMakeFiles/Makefile2:2830: CMakeFiles/check.dir/rule] Error 2 make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich' make: *** [Makefile:286: check] Error 2 ++ exit 0 + popd ~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea + '[' mpich = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/mpich/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/mpich-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/mpich-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-s390x + eval 'unset LD_LIBRARY_PATH; unset MPI_COMPILER; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset MPI_MAN; unset MPI_PYTHON_SITEARCH; unset _LMFILES_; unset LOADEDMODULES; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_FORTRAN_MOD_DIR; unset MPI_HOME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SYSCONFIG; unset MPI_SUFFIX; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_PYTHON2_SITEARCH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset LD_LIBRARY_PATH ++ unset MPI_COMPILER ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset MPI_PYTHON_SITEARCH ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_FORTRAN_MOD_DIR ++ unset MPI_HOME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SYSCONFIG ++ unset MPI_SUFFIX ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_PYTHON2_SITEARCH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + for mpi in mpich openmpi + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; LOADEDMODULES=; export LOADEDMODULES; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ LOADEDMODULES= ++++ export LOADEDMODULES ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module load mpi/openmpi-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw load mpi/openmpi-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-s390x + eval 'MPI_COMPILER=openmpi-s390x; export MPI_COMPILER; LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH; MANPATH=/usr/share/man/openmpi-s390x:/usr/share/man:; export MANPATH; MPI_INCLUDE=/usr/include/openmpi-s390x; export MPI_INCLUDE; MPI_MAN=/usr/share/man/openmpi-s390x; export MPI_MAN; _LMFILES_=/usr/share/modulefiles/mpi/openmpi-s390x; export _LMFILES_; LOADEDMODULES=mpi/openmpi-s390x; export LOADEDMODULES; PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi; export MPI_PYTHON3_SITEARCH; MPI_HOME=/usr/lib64/openmpi; export MPI_HOME; MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR; __MODULES_LMALTNAME=mpi/openmpi-s390x\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME; __MODULES_LMCONFLICT=mpi/openmpi-s390x\&mpi; export __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH; MPI_SUFFIX=_openmpi; export MPI_SUFFIX; MPI_SYSCONFIG=/etc/openmpi-s390x; export MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB; PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN; test 0;' ++ MPI_COMPILER=openmpi-s390x ++ export MPI_COMPILER ++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ++ export LD_LIBRARY_PATH ++ MANPATH=/usr/share/man/openmpi-s390x:/usr/share/man: ++ export MANPATH ++ MPI_INCLUDE=/usr/include/openmpi-s390x ++ export MPI_INCLUDE ++ MPI_MAN=/usr/share/man/openmpi-s390x ++ export MPI_MAN ++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-s390x ++ export _LMFILES_ ++ LOADEDMODULES=mpi/openmpi-s390x ++ export LOADEDMODULES ++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi ++ export MPI_PYTHON3_SITEARCH ++ MPI_HOME=/usr/lib64/openmpi ++ export MPI_HOME ++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi ++ export MPI_FORTRAN_MOD_DIR ++ __MODULES_LMALTNAME='mpi/openmpi-s390x&as|mpi/default&as|mpi/latest' ++ export __MODULES_LMALTNAME ++ __MODULES_LMCONFLICT='mpi/openmpi-s390x&mpi' ++ export __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:2 ++ export __MODULES_SHARE_MANPATH ++ MPI_SUFFIX=_openmpi ++ export MPI_SUFFIX ++ MPI_SYSCONFIG=/etc/openmpi-s390x ++ export MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ MPI_LIB=/usr/lib64/openmpi/lib ++ export MPI_LIB ++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ MPI_BIN=/usr/lib64/openmpi/bin ++ export MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + export PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + PRTE_MCA_rmaps_default_mapping_policy=:oversubscribe + pushd build_openmpi ~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi ~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea + export OMPI_MCA_rmaps_base_oversubscribe=yes + OMPI_MCA_rmaps_base_oversubscribe=yes + export HDF5_USE_FILE_LOCKING=FALSE + HDF5_USE_FILE_LOCKING=FALSE + export BOUT_TEST_TIMEOUT=15m + BOUT_TEST_TIMEOUT=15m + sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest #!/bin/bash # Cores: 3 make || exit test -z $MPIRUN && MPIRUN='mpirun -np' # Kill the test after 3 seconds, if it hasn't already exited OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization e=$? if test $e -ne 0 then echo "The test failed. That can be caused by a timeout." echo "If this test is run on high load, it may fail occasionally." echo "The load is:" uptime fi exit $e + make -j2 build-check /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 build-check make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles 70 make -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 0%] Built target pvpre make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" [ 2%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 2%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-all.cc make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y/wave.cxx [ 42%] Linking CXX executable wave cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Built target MMS-wave-1d-y make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection/advection.cxx [ 42%] Linking CXX executable advection cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Built target MMS-advection make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion/diffusion.cxx [ 42%] Linking CXX shared library ../../../../../lib/libgtest.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.10.0 -o ../../../../../lib/libgtest.so.1.10.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" [ 42%] Linking CXX executable cyto cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Built target MMS-diffusion make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 44%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d/wave.cxx [ 44%] Linking CXX executable wave cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 44%] Built target gtest make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color=" [ 44%] Built target MMS-wave-1d make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 44%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-s390x-linux-gnu.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 47%] Built target boutpp.cpython-312-s390x-linux-gnu make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 48%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace/boutexcept.cxx [ 48%] Linking CXX executable boutexcept cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 48%] Built target test-backtrace make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 48%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler/test_beuler.cxx [ 50%] Linking CXX executable test_yupdown_weights cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 50%] Built target test-yupdown-weights make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 50%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx:1: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/options.hxx:3:2: warning: #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix [-Wcpp] 3 | #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix | ^~~~~~~ [ 50%] Linking CXX executable test_beuler cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 50%] Built target test_beuler make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 51%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args/command-args.cxx [ 51%] Linking CXX executable test-bout-override-default-option cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 51%] Built target test-bout-override-default-option make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 51%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications/test-communications.cxx [ 51%] Linking CXX executable command-args cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 51%] Built target test-command-args make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 51%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx [ 52%] Linking CXX executable test-coordinates-initialization cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 52%] Built target test-coordinates-initialization make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 52%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic/test_cyclic.cxx [ 52%] Linking CXX executable test-communications cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 52%] Built target test-communications make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 52%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2 && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2/test_delp2.cxx [ 52%] Linking CXX executable test_delp2 cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2 -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl [ 52%] Linking CXX executable test_cyclic cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 52%] Built target test-delp2 make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 52%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade/test-datafile-facade.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 52%] Built target test-cyclic make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 52%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability/2fluid.cxx [ 54%] Linking CXX executable test-datafile-facade cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 54%] Built target test-datafile-facade make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 54%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered/2fluid.cxx [ 54%] Linking CXX executable 2fluid cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl [ 55%] Linking CXX executable 2fluid cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 55%] Built target test-drift-instability make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 55%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx [ 55%] Linking CXX executable test_fieldgroupcomm cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 55%] Built target test-drift-instability-staggered make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 55%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata/test_griddata.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 55%] Built target test-fieldgroupComm make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 55%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx [ 57%] Linking CXX executable test_griddata cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl [ 57%] Linking CXX executable test_griddata cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 57%] Built target test-griddata make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 57%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro/test_gyro.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 57%] Built target test-griddata-yboundary-guards make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 57%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial/test_initial.cxx [ 58%] Linking CXX executable test_gyro cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl [ 58%] Linking CXX executable test_initial cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 58%] Built target test-gyro make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 58%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability/2fluid.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 58%] Built target test-initial make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 58%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate/test_interpolate.cxx [ 58%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl [ 60%] Linking CXX executable 2fluid cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 60%] Built target test-interpolate make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 60%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z/test_interpolate.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 60%] Built target test-interchange-instability make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 61%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:4: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx: In instantiation of ‘PetscErrorCode bout::inversion::InvertableOperator::setup() [with T = Field3D; PetscErrorCode = int]’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:51:19: required from here /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:44: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 222 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 225 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 225 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 231 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 231 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 262 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 262 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 262 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 262 | if (localmesh->firstY() or localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 265 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations] 265 | if (localmesh->firstY()) { | ~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here 441 | [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0; | ^~~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 270 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations] 270 | if (localmesh->lastY()) { | ~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here 445 | [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0; | ^~~~~ [ 61%] Linking CXX executable test_interpolate cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 61%] Built target test-interpolate-z make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 61%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar/test_invpar.cxx [ 61%] Linking CXX executable invertable_operator cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 61%] Built target test-invertable-operator make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 62%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace/test_laplace.cxx [ 62%] Linking CXX executable test_invpar cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 62%] Built target test-invpar make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 62%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx [ 62%] Linking CXX executable test_laplace cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 62%] Built target test-laplace make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 64%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx [ 64%] Linking CXX executable test-laplace3d cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl [ 64%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 64%] Built target test-laplace-petsc3d make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 64%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short/test-laplacexy.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 64%] Built target test-laplacexy-fv make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 65%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz/test-laplacexz.cxx [ 65%] Linking CXX executable test-laplacexy cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 65%] Built target test-laplacexy-short make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 65%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx [ 65%] Linking CXX executable test-laplacexz cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 65%] Built target test-laplacexz make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 67%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx [ 67%] Linking CXX executable test_multigrid_laplace cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl [ 67%] Linking CXX executable test_naulin_laplace cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 67%] Built target test-multigrid-laplace make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 67%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf/test-options-netcdf.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 67%] Built target test-naulin-laplace make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 68%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx [ 68%] Linking CXX executable test-options-netcdf cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 68%] Built target test-options-netcdf make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 68%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx [ 68%] Linking CXX executable test_petsc_laplace cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 68%] Built target test-petsc-laplace make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 70%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io/test-restart-io.cxx [ 70%] Linking CXX executable test_petsc_laplace_MAST_grid cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl [ 70%] Linking CXX executable test-restart-io cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 70%] Built target test-petsc-laplace-MAST-grid make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 70%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting/test_restarting.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 70%] Built target test-restart-io make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 70%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth/test_smooth.cxx [ 70%] Linking CXX executable test_restarting cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 70%] Built target test-restarting make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color=" [ 71%] Linking CXX executable test_smooth cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1 make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 71%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb/test_snb.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 71%] Built target test-smooth make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 71%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver/test_solver.cxx [ 71%] Linking CXX executable test_snb cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl [ 72%] Linking CXX executable test_solver cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 72%] Built target test-snb make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 72%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash/squash.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 72%] Built target test-solver make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 72%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck/test_stopCheck.cxx [ 72%] Linking CXX executable squash cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl [ 74%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 74%] Built target test-squash make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 74%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file/test_stopCheck.cxx make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 74%] Built target test-stopCheck make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 74%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift/test-twistshift.cxx [ 75%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 75%] Built target test-twistshift make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 75%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered/test-twistshift.cxx [ 75%] Linking CXX executable test_stopCheck cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 75%] Built target test-stopCheck-file make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 75%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec/testVec.cxx [ 75%] Linking CXX executable test-twistshift cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 75%] Built target test-twistshift-staggered make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 75%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown/test_yupdown.cxx [ 77%] Linking CXX executable testVec cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 77%] Built target test-vec make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 77%] Built target build-check-mms-tests make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 77%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/src/gmock-all.cc [ 77%] Linking CXX executable test_yupdown cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 77%] Built target test-yupdown make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 77%] Building python interface cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-312-s390x-linux-gnu.so /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-312-s390x-linux-gnu.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 77%] Built target boutpp make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-integrated-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 77%] Built target build-check-integrated-tests [ 78%] Linking CXX shared library ../../../../../lib/libgmock.so cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.10.0 -o ../../../../../lib/libgmock.so.1.10.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o" -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../../../lib/libgtest.so.1.10.0 cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 78%] Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o [ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem 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/usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable] 29 | bout::HypreLib hyprelib{}; | ^~~~~~~~ [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field2d.cxx [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 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-I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field_factory.cxx [ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-s390x/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_fieldgroup.cxx [ 81%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o -MF CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o.d -o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/invert/test_fft.cxx [ 90%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit 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tests/unit/CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem 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CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../lib/libgmock.so.1.10.0 ../../lib/libbout++.so.5.0.0 ../../lib/libgtest.so.1.10.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.6.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.6.1 -ldl /usr/bin/ld: /tmp/cchKkTUd.ltrans107.ltrans.o: in function `testing::internal::TestFactoryImpl::CreateTest()': /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/sys/test_options_netcdf.cxx:28:(.text+0x2332): warning: the use of `tmpnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [100%] Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [100%] Built target build-check-unit-tests make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f CMakeFiles/build-check.dir/build.make CMakeFiles/build-check.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [100%] Built target build-check make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles 0 make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' + SEGFAULT_SIGNALS=segv + make check /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 check make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles 70 make -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 0%] Built target pvpre make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 2%] Built target pvode make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Built target bout++ make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Built target MMS-wave-1d-y make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Built target MMS-advection make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 42%] Built target MMS-diffusion make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 44%] Built target MMS-wave-1d make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' [ 44%] Built target build-check-mms-tests make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' ctest -R MMS- --output-on-failure Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi Start 52: MMS-diffusion 1/7 Test #52: MMS-diffusion .................... Passed 10.20 sec Start 53: MMS-wave-1d 2/7 Test #53: MMS-wave-1d ...................... Passed 9.25 sec Start 54: MMS-wave-1d-y 3/7 Test #54: MMS-wave-1d-y .................... Passed 9.32 sec Start 55: MMS-bracket 4/7 Test #55: MMS-bracket ...................... Passed 1.27 sec Start 56: MMS-derivatives3 5/7 Test #56: MMS-derivatives3 ................. Passed 1.77 sec Start 57: MMS-shiftedmetricinterp 6/7 Test #57: MMS-shiftedmetricinterp .......... Passed 6.18 sec Start 58: MMS-upwinding3 7/7 Test #58: MMS-upwinding3 ................... Passed 2.23 sec 100% tests passed, 0 tests failed out of 7 Total Test time (real) = 40.25 sec make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' Built target check-mms-tests make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' Built target gtest make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' Built target gmock make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' Built target serial_tests make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'. make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' Built target build-check-unit-tests make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' ctest -R serial_tests --output-on-failure Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi Start 1: serial_tests 1/1 Test #1: serial_tests .....................***Failed 6.20 sec [WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 2 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out. Running main() from bout_test_main.cxx [WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 2 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out. [WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 2 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out. Timer::resetTime Timer name | Total time (s) | % of top | Hits | Mean time/hit (s) -------------------|----------------|----------|------|------------------ one | 0.003264832 | 1.00 | 1 | 0.003264832 two | 0.002174665 | 0.67 | 2 | 0.0010873325 18 characters long | 9.1e-08 | 0.00 | 1 | 9.1e-08 Calculating differential geometry terms Option ddx:first = C2 () Option ddx:upwind = C2 () Option ddy:first = C2 () Option ddy:upwind = C2 () Option ddz:first = C2 () Option ddz:upwind = C2 () Option ddy:first = C2 () Option ddy:upwind = C2 () Option ddx:first = C2 () Option ddx:upwind = C2 () Option ddy:first = C2 () Option ddy:upwind = C2 () Option ddz:first = C2 () Option ddz:upwind = C2 () Option ddy:first = C2 () Option ddy:upwind = C2 () /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx:238: Failure Expected: getUniform(nonuniform) throws an exception of type BoutException. Actual: it throws fmt::v10::format_error with description "argument not found". [ FAILED ] FieldTest.GetUniformFalse3D (0 ms) /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx:251: Failure Expected: getUniform(nonuniform) throws an exception of type BoutException. Actual: it throws fmt::v10::format_error with description "argument not found". [ FAILED ] FieldTest.GetUniformFalse2D (1 ms) [==========] 2158 tests from 141 test suites ran. (5068 ms total) [ PASSED ] 2156 tests. 0% tests passed, 1 tests failed out of 1 Total Test time (real) = 6.20 sec The following tests FAILED: 1 - serial_tests (Failed) Errors while running CTest make[3]: *** [CMakeFiles/check-unit-tests.dir/build.make:73: CMakeFiles/check-unit-tests] Error 8 make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[2]: *** [CMakeFiles/Makefile2:2743: CMakeFiles/check-unit-tests.dir/all] Error 2 make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make[1]: *** [CMakeFiles/Makefile2:2830: CMakeFiles/check.dir/rule] Error 2 make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi' make: *** [Makefile:286: check] Error 2 ++ exit 0 + popd ~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea + '[' openmpi = mpich ']' + . /etc/profile.d/modules.sh ++ '[' -n /bin/sh ']' ++ '[' sh = sh ']' ++ shell=sh ++ '[' -f /usr/share/Modules/init/sh ']' ++ . /usr/share/Modules/init/sh +++ unset _mlshdbg +++ '[' 0 = 1 ']' +++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD' +++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD' +++ unset _mlre _mlIFS +++ '[' -n x ']' +++ _mlIFS=' ' +++ IFS=' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' +++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']' ++++ eval 'echo ${LD_LIBRARY_PATH+x}' +++++ echo x +++ '[' -n x ']' ++++ eval 'echo ${LD_LIBRARY_PATH}' +++++ echo /usr/lib64/openmpi/lib +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' ' +++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH ++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' ' +++ for _mlv in ${MODULES_RUN_QUARANTINE:-} +++ '[' LD_PRELOAD = LD_PRELOAD ']' +++ '[' LD_PRELOAD = LD_PRELOAD ']' ++++ eval 'echo ${LD_PRELOAD+x}' +++++ echo +++ '[' -n '' ']' +++ _mlrv=MODULES_RUNENV_LD_PRELOAD ++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}' +++++ echo +++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' +++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']' +++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 ' ++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib +++++ LD_LIBRARY_PATH= +++++ LD_PRELOAD= +++++ __MODULES_QUARANTINE_SET=1 +++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit +++ _mlcode='_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' +++ _mlret=0 +++ '[' -n x ']' +++ IFS=' ' +++ unset _mlIFS +++ unset _mlre _mlv _mlrv +++ '[' 0 -eq 0 ']' +++ eval '_module_raw() { eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")"; _mlstatus=$?; return $_mlstatus; }; module() { local _mlredir=0; if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then _mlredir=0; elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then _mlredir=1; fi; fi; case " $@ " in *'\'' --no-redirect '\''*) _mlredir=0 ;; *'\'' --redirect '\''*) _mlredir=1 ;; esac; if [ $_mlredir -eq 0 ]; then _module_raw "$@"; else _module_raw "$@" 2>&1; fi; }; ml() { module ml "$@"; }; MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD; unset __MODULES_AUTOINIT_INPROGRESS; MODULESHOME=/usr/share/Modules; export MODULESHOME; test 0;' ++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl ++++ export MODULES_CMD ++++ unset __MODULES_AUTOINIT_INPROGRESS ++++ MODULESHOME=/usr/share/Modules ++++ export MODULESHOME ++++ test 0 +++ '[' /bin/sh '!=' '' ']' +++ export -f _module_raw +++ export -f module ++++ type -t ml +++ '[' function = function ']' +++ export -f ml +++ unset _mlcode _mlret +++ '[' -n '' ']' + module unload mpi/openmpi-s390x + local _mlredir=0 + '[' -n '' ']' + case " $@ " in + '[' 0 -eq 0 ']' + _module_raw unload mpi/openmpi-s390x ++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-s390x + eval 'unset MPI_COMPILER; unset LD_LIBRARY_PATH; MANPATH=/usr/share/man:; export MANPATH; unset MPI_INCLUDE; unset MPI_MAN; unset _LMFILES_; unset LOADEDMODULES; PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH; unset MPI_PYTHON3_SITEARCH; unset MPI_HOME; unset MPI_FORTRAN_MOD_DIR; unset __MODULES_LMALTNAME; unset __MODULES_LMCONFLICT; __MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH; unset MPI_SUFFIX; unset MPI_SYSCONFIG; __MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH; unset MPI_LIB; PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH; unset MPI_BIN; test 0;' ++ unset MPI_COMPILER ++ unset LD_LIBRARY_PATH ++ MANPATH=/usr/share/man: ++ export MANPATH ++ unset MPI_INCLUDE ++ unset MPI_MAN ++ unset _LMFILES_ ++ unset LOADEDMODULES ++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig ++ export PKG_CONFIG_PATH ++ unset MPI_PYTHON3_SITEARCH ++ unset MPI_HOME ++ unset MPI_FORTRAN_MOD_DIR ++ unset __MODULES_LMALTNAME ++ unset __MODULES_LMCONFLICT ++ __MODULES_SHARE_MANPATH=:1 ++ export __MODULES_SHARE_MANPATH ++ unset MPI_SUFFIX ++ unset MPI_SYSCONFIG ++ __MODULES_SHARE_PKG_CONFIG_PATH=:1 ++ export __MODULES_SHARE_PKG_CONFIG_PATH ++ unset MPI_LIB ++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin ++ export PATH ++ unset MPI_BIN ++ test 0 + _mlstatus=0 + return 0 + RPM_EC=0 ++ jobs -p + exit 0 Processing files: bout++-mpich-5.0.0-11.fc40.s390x Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.z2QtHa + umask 022 + cd /builddir/build/BUILD + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + DOCDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-mpich + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/README.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.bib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.cff /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CHANGELOG.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-mpich + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-mpich + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.9bhupx + umask 022 + cd /builddir/build/BUILD + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + LICENSEDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/bout++-mpich + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/bout++-mpich + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/bout++-mpich + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE.GPL /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/bout++-mpich + RPM_EC=0 ++ jobs -p + exit 0 Provides: bout++-mpich = 5.0.0-11.fc40 bout++-mpich(s390-64) = 5.0.0-11.fc40 bundled(libpvode) libbout++.so.5.0.0()(64bit)(mpich-s390x) libpvode.so.1.0.0()(64bit)(mpich-s390x) libpvpre.so.1.0.0()(64bit)(mpich-s390x) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.2)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.12()(64bit)(mpich-s390x) libnetcdf.so.19()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.20()(64bit)(mpich-s390x) libpvode.so.1.0.0()(64bit)(mpich-s390x) libpvpre.so.1.0.0()(64bit)(mpich-s390x) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.5()(64bit)(mpich-s390x) libsundials_cvode.so.6()(64bit)(mpich-s390x) libsundials_ida.so.6()(64bit)(mpich-s390x) libsundials_nvecparallel.so.6()(64bit)(mpich-s390x) rtld(GNU_HASH) Recommends: environment-modules python3-boutdata python3-boututils python3-xbout Processing files: bout++-mpich-devel-5.0.0-11.fc40.s390x Provides: bout++-mpich-devel = 5.0.0-11.fc40 bout++-mpich-devel(s390-64) = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-mpich-devel make mpark-variant-devel mpich-devel netcdf-cxx4-devel netcdf-devel petsc-mpich-devel sundials-devel sundials-mpich-devel zlib-devel Processing files: python3-bout++-mpich-5.0.0-11.fc40.s390x Provides: libboutpp.cpython-312-s390x-linux-gnu.so()(64bit)(mpich-s390x) python-bout++-mpich = 5.0.0-11.fc40 python3-bout++-mpich = 5.0.0-11.fc40 python3-bout++-mpich(s390-64) = 5.0.0-11.fc40 python3.12-bout++-mpich = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbout++.so.5.0.0()(64bit)(mpich-s390x) libc.so.6()(64bit) libc.so.6(GLIBC_2.2)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 rtld(GNU_HASH) Recommends: python3-xbout Processing files: bout++-openmpi-5.0.0-11.fc40.s390x Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.wpmdMM + umask 022 + cd /builddir/build/BUILD + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + DOCDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-openmpi + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/README.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.bib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.cff /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CHANGELOG.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-openmpi + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/bout++-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Hm1UhB + umask 022 + cd /builddir/build/BUILD + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + LICENSEDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/bout++-openmpi + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/bout++-openmpi + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/bout++-openmpi + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE.GPL /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/bout++-openmpi + RPM_EC=0 ++ jobs -p + exit 0 Provides: bout++-openmpi = 5.0.0-11.fc40 bout++-openmpi(s390-64) = 5.0.0-11.fc40 bundled(libpvode) libbout++.so.5.0.0()(64bit)(openmpi-s390x) libpvode.so.1.0.0()(64bit)(openmpi-s390x) libpvpre.so.1.0.0()(64bit)(openmpi-s390x) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.2)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.40()(64bit)(openmpi-s390x) libnetcdf.so.19()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.20()(64bit)(openmpi-s390x) libpvode.so.1.0.0()(64bit)(openmpi-s390x) libpvpre.so.1.0.0()(64bit)(openmpi-s390x) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.5()(64bit)(openmpi-s390x) libsundials_cvode.so.6()(64bit)(openmpi-s390x) libsundials_ida.so.6()(64bit)(openmpi-s390x) libsundials_nvecparallel.so.6()(64bit)(openmpi-s390x) rtld(GNU_HASH) Recommends: environment-modules python3-boutdata python3-boututils python3-xbout Processing files: bout++-openmpi-devel-5.0.0-11.fc40.s390x Provides: bout++-openmpi-devel = 5.0.0-11.fc40 bout++-openmpi-devel(s390-64) = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-openmpi-devel make mpark-variant-devel netcdf-cxx4-devel netcdf-devel openmpi-devel petsc-openmpi-devel sundials-devel sundials-openmpi-devel zlib-devel Processing files: python3-bout++-openmpi-5.0.0-11.fc40.s390x Provides: libboutpp.cpython-312-s390x-linux-gnu.so()(64bit)(openmpi-s390x) python-bout++-openmpi = 5.0.0-11.fc40 python3-bout++-openmpi = 5.0.0-11.fc40 python3-bout++-openmpi(s390-64) = 5.0.0-11.fc40 python3.12-bout++-openmpi = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libbout++.so.5.0.0()(64bit)(openmpi-s390x) libc.so.6()(64bit) libc.so.6(GLIBC_2.2)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 rtld(GNU_HASH) Recommends: python3-xbout Processing files: bout++-common-5.0.0-11.fc40.s390x Provides: bout++-common = 5.0.0-11.fc40 bout++-common(s390-64) = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-bout++-5.0.0-11.fc40.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.c0m8tl + umask 022 + cd /builddir/build/BUILD + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + DOCDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/python3-bout++ + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/README.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.bib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.cff /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CHANGELOG.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/python3-bout++ + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/doc/python3-bout++ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.nOAOwq + umask 022 + cd /builddir/build/BUILD + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + LICENSEDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/python3-bout++ + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/python3-bout++ + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/python3-bout++ + cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE.GPL /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x/usr/share/licenses/python3-bout++ + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-bout++ = 5.0.0-11.fc40 python3-bout++ = 5.0.0-11.fc40 python3.12-bout++ = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python3-boutdata python3-boututils python3-matplotlib python3-scipy Processing files: bout++-doc-5.0.0-11.fc40.noarch Provides: bout++-doc = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: bout++-debugsource-5.0.0-11.fc40.s390x Provides: bout++-debugsource = 5.0.0-11.fc40 bout++-debugsource(s390-64) = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: bout++-debuginfo-5.0.0-11.fc40.s390x Provides: bout++-debuginfo = 5.0.0-11.fc40 bout++-debuginfo(s390-64) = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(s390-64) = 5.0.0-11.fc40 Processing files: bout++-mpich-debuginfo-5.0.0-11.fc40.s390x Provides: bout++-mpich-debuginfo = 5.0.0-11.fc40 bout++-mpich-debuginfo(s390-64) = 5.0.0-11.fc40 debuginfo(build-id) = 4f643c217e9ceb8b56223282f1aa9cc2e4617d7b debuginfo(build-id) = 8ab69aa0b42b1f74e48932e3b17bba4aac3400bd debuginfo(build-id) = ba3fe7d4ffbb819144bfc3cfdaad7b50666a88d5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(s390-64) = 5.0.0-11.fc40 Processing files: python3-bout++-mpich-debuginfo-5.0.0-11.fc40.s390x Provides: debuginfo(build-id) = 64c6fc303b4494e6bca8eb764ca25fa78b5b1b01 python-bout++-mpich-debuginfo = 5.0.0-11.fc40 python3-bout++-mpich-debuginfo = 5.0.0-11.fc40 python3-bout++-mpich-debuginfo(s390-64) = 5.0.0-11.fc40 python3.12-bout++-mpich-debuginfo = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(s390-64) = 5.0.0-11.fc40 Processing files: bout++-openmpi-debuginfo-5.0.0-11.fc40.s390x Provides: bout++-openmpi-debuginfo = 5.0.0-11.fc40 bout++-openmpi-debuginfo(s390-64) = 5.0.0-11.fc40 debuginfo(build-id) = 700855dac523be4ed600ecd615c28fade0c09174 debuginfo(build-id) = a93e790401e12b8120d711781e88e1aebbd81531 debuginfo(build-id) = f590f9ab315e476c30be40fef97b392fa33e0fe7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(s390-64) = 5.0.0-11.fc40 Processing files: python3-bout++-openmpi-debuginfo-5.0.0-11.fc40.s390x Provides: debuginfo(build-id) = 5a37b29a699e5ef50f661dff6154ab1c0d052dfc python-bout++-openmpi-debuginfo = 5.0.0-11.fc40 python3-bout++-openmpi-debuginfo = 5.0.0-11.fc40 python3-bout++-openmpi-debuginfo(s390-64) = 5.0.0-11.fc40 python3.12-bout++-openmpi-debuginfo = 5.0.0-11.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: bout++-debugsource(s390-64) = 5.0.0-11.fc40 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x Wrote: /builddir/build/RPMS/bout++-mpich-debuginfo-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/bout++-openmpi-debuginfo-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/bout++-debugsource-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/python3-bout++-openmpi-debuginfo-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/python3-bout++-mpich-debuginfo-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/bout++-doc-5.0.0-11.fc40.noarch.rpm Wrote: /builddir/build/RPMS/bout++-debuginfo-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/bout++-openmpi-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/bout++-openmpi-devel-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/bout++-mpich-devel-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/bout++-mpich-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/python3-bout++-openmpi-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/python3-bout++-mpich-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/bout++-common-5.0.0-11.fc40.s390x.rpm Wrote: /builddir/build/RPMS/python3-bout++-5.0.0-11.fc40.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.mxfaqa + umask 022 + cd /builddir/build/BUILD + cd BOUT++-v5.0.0.dev10626+gd935fa1ea + /usr/bin/rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.s390x + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.sVy3Zi + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea-SPECPARTS + rm -rf BOUT++-v5.0.0.dev10626+gd935fa1ea BOUT++-v5.0.0.dev10626+gd935fa1ea.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild bout++-5.0.0-11.fc40.src.rpm Finish: build phase for bout++-5.0.0-11.fc40.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-s390x-1698439533.476517/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-s390x-1698439533.476517/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-s390x-1698439533.476517/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/bout++-5.0.0-11.fc40.src.rpm) Config(child) 34 minutes 56 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "bout++-mpich-debuginfo", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "bout++-common", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "bout++-openmpi", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "bout++-doc", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "noarch" }, { "name": "bout++-openmpi-debuginfo", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "bout++", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "src" }, { "name": "bout++-debuginfo", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "python3-bout++-openmpi-debuginfo", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "python3-bout++", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "noarch" }, { "name": "bout++-openmpi-devel", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "python3-bout++-openmpi", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "bout++-mpich", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "python3-bout++-mpich-debuginfo", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "bout++-debugsource", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "bout++-mpich-devel", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" }, { "name": "python3-bout++-mpich", "epoch": null, "version": "5.0.0", "release": "11.fc40", "arch": "s390x" } ] } RPMResults finished