Here is a list of all class members with links to the classes they belong to:
- b -
- b
: GammaDistributionFitter::GammaDistributionFitResult
, GumbelDistributionFitter::GumbelDistributionFitResult
- b2_ion_losses_cd_
: PILISModel
- b2_ion_losses_cr_
: PILISModel
- b_
: CubicSpline2d
, QuadraticRegression
, EdwardsLippertIterator
- B_
: EGHModel
- b_
: TrypticIterator
, TOFCalibration
- b_ion_losses_cd_
: PILISModel
- b_ion_losses_cr_
: PILISModel
- back()
: Weights
, ConstRefVector< ContainerT >
- background_subtraction_
: MRMTransitionGroupPicker
- BackgroundControl()
: BackgroundControl
- backgroundController
: ProcessData
- BackgroundIntensityBin()
: BackgroundIntensityBin
- backgroundIntensityBinsIntens_
: SuperHirnParameters
- backgroundIntensityBinsMinBinCount_
: SuperHirnParameters
- backgroundIntensityBinsMZ_
: SuperHirnParameters
- backgroundIntensityBinsTR_
: SuperHirnParameters
- BackgroundNoise
: SHFeature
- backtrack_tech
: LPWrapper::SolverParam
- backward_
: HiddenMarkovModel
- Base
: Map< Key, T >
, Matrix< Value >
, ConsensusMap
, FeatureMap
, MSExperiment< PeakT, ChromatogramPeakT >
, AsymmetricStatistics< RealT >
, FeatureFinderAlgorithmIsotopeWavelet
- base
: IntensityIteratorWrapper< IteratorT >
- Base
: SimplePairFinder
, StablePairFinder
, DBoundingBox< D >
, DRange< D >
- Base64()
: Base64
- base64
: MzMLHandlerHelper::BinaryData
- base64coder_
: MSNumpressCoder
- base_container_ptr_
: ConstRefVector< ContainerT >
- base_name_
: PeptideIdentification
- BaseException()
: BaseException
- baseExperiment
: IsobaricChannelExtractor::PuritySate_
- BaseFeature()
: BaseFeature
- BaseGroupFinder()
: BaseGroupFinder
- BaseLabeler()
: BaseLabeler
- BASELINE
: MassAnalyzer
- baseline
: FeatureFinderAlgorithmPickedHelperStructs::MassTraces
- BASELINE_REDUCTION
: DataProcessing
- BaseModel()
: BaseModel< D >
- basename()
: File
- basename_
: CachedSwathFileConsumer
- BASEPEAK_CHROMATOGRAM
: ChromatogramSettings
- BaseSuperimposer()
: BaseSuperimposer
- BaseVisualizerGUI()
: BaseVisualizerGUI
- basic()
: AAIndex
- basic_residues_
: IonizationSimulation
- basicity_
: SvmTheoreticalSpectrumGenerator
- BasicStatistics
: EGHModel
, EmgModel
, GaussModel
, BasicStatistics< RealT >
- BATCH
: IonSource
- batch_size_
: XTandemInfile
- bb_charge_
: ProtonDistributionModel
- bb_charge_full_
: ProtonDistributionModel
- bb_charge_ion_c_term_
: ProtonDistributionModel
- bb_charge_ion_n_term_
: ProtonDistributionModel
- BC_ZERO_ENDPOINTS
: BSpline2d
- BC_ZERO_FIRST
: BSpline2d
- BC_ZERO_SECOND
: BSpline2d
- begin
: ScanWindow
, AASequence
, EdwardsLippertIterator
, EmpiricalFormula
, IsotopeDistribution
, PepIterator
, TrypticIterator
, HashGrid< Cluster >
, BinnedSpectrum
, ConstRefVector< ContainerT >
, DPosition< D, TCoordinateType >
, Param
, SparseVector< Value >
, FastaIterator
, FastaIteratorIntern
, TextFile
, ConsensusFeature
, MassTrace
, MSExperiment< PeakT, ChromatogramPeakT >
, Histogram< ValueType, BinSizeType >
, IsotopeWaveletTransform< PeakType >::TransSpectrum
- begin_
: GUIProgressLoggerImpl
, ScanWindowVisualizer
- begin_right_padding_
: ContinuousWaveletTransform
- beginResidue()
: ResidueDB
- BernNorm()
: BernNorm
- best_search_engine_score
: MzTabProteinSectionRow
, MzTabPeptideSectionRow
, MzTabSmallMoleculeSectionRow
- bestk_()
: MapAlignmentAlgorithmSpectrumAlignment
- bibliographic_reference_
: MSQuantifications
- big_string_
: BigString
, SuffixArrayPeptideFinder
- BiGaussFitter1D()
: BiGaussFitter1D
- BiGaussModel()
: BiGaussModel
- BigString()
: BigString
- BilinearInterpolation()
: BilinearInterpolation< Key, Value >
- BimapType
: ConfidenceScoring
- bin_count_
: SignalToNoiseEstimatorMeanIterative< Container >
, SignalToNoiseEstimatorMedian< Container >
- bin_iterator
: BinnedSpectrum
- bin_masses_
: PrecursorIonSelectionPreprocessing
- bin_size_
: BinnedSpectrum
, Histogram< ValueType, BinSizeType >
- bin_spread_
: BinnedSpectrum
- binary
: QcMLFile::Attachment
- BINARY
: LPWrapper
- binary_data_array_
: MzMLValidator
- binary_data_type_
: MzMLValidator
- BinaryComposeFunctionAdapter()
: BinaryComposeFunctionAdapter< OP1, OP2, OP3 >
- BinaryData
: MzMLHandler< MapType >
, MzMLSpectrumDecoder
- binaryDataArrayPtrs
: OSChromatogram
, Chromatogram
, Spectrum
, OSSpectrum
- binarySearchNodes_()
: ProteinResolver
- BinaryTreeNode()
: BinaryTreeNode
- BindingSite()
: EnzymaticDigestion::BindingSite
- BinnedSharedPeakCount()
: BinnedSharedPeakCount
- BinnedSpectralContrastAngle()
: BinnedSpectralContrastAngle
- BinnedSpectrum()
: BinnedSpectrum
- BinnedSpectrumCompareFunctor()
: BinnedSpectrumCompareFunctor
- BinnedSumAgreeingIntensities()
: BinnedSumAgreeingIntensities
- bins_
: BinnedSpectrum
, Histogram< ValueType, BinSizeType >
- binSize()
: Histogram< ValueType, BinSizeType >
- binValue()
: Histogram< ValueType, BinSizeType >
- biological_rng_
: SimRandomNumberGenerator
- BIon
: Residue
- BIRD
: Precursor
- black
: MultiplexFiltering::BlackListEntry
- black_exception_charge
: MultiplexFiltering::BlackListEntry
- black_exception_mass_shift_index
: MultiplexFiltering::BlackListEntry
- black_exception_mz_position
: MultiplexFiltering::BlackListEntry
- blacklist_
: MultiplexFiltering
- blacklistPeaks()
: MultiplexFiltering
- blank_features
: PeptideAndProteinQuant::Statistics
- blind_
: InspectInfile
- blocks_list_
: TOPPASBase
- BOOL
: PILISCrossValidation::Option
- BORDER_LENGTH
: SVMWrapper
- border_length_
: SVMWrapper
- borderPoint_()
: TOPPASEdge
- BOTH
: Compomer
- BOTTOM
: AxisPainter
- bottom_axis_
: HistogramWidget
- bound_()
: LogStream
- boundaries_
: MultiplexFilteringProfile
- boundary_
: MascotInfile
, MascotRemoteQuery
- BoundaryCondition
: BSpline2d
- bounding_box_
: Annotation1DItem
, GridBasedCluster
- boundingBox()
: Annotation1DItem
- boundingRect()
: TOPPASOutputFileListVertex
, TOPPASEdge
, TOPPASMergerVertex
, TOPPASInputFileListVertex
, TOPPASVertex
, TOPPASToolVertex
- Box
: IsotopeWaveletTransform< PeakType >
, FeatureFinderAlgorithmIsotopeWavelet
- branching_tech
: LPWrapper::SolverParam
- breakpoint_set_
: TOPPASToolVertex
- breakString()
: ConsoleUtils
- breakString_()
: ConsoleUtils
- bringInMetaStats_()
: LayerStatisticsDialog
- browseDefaultPath_()
: TOPPViewPrefDialog
- browseTempPath_()
: TOPPViewPrefDialog
- brush_color_
: TOPPASVertex
- bseries_score
: OpenSwath_Scores
- BSpline2d()
: BSpline2d
- bspline_
: PeakWidthEstimator
- bucketFilter_()
: MapAlignmentAlgorithmSpectrumAlignment
- bucketsize_
: MapAlignmentAlgorithmSpectrumAlignment
- buffer_
: SpectrumCanvas
, TextFile
, HistogramWidget
- BufferOverflow()
: BufferOverflow
- buildAnalysisCollection_()
: MzIdentMLDOMHandler
- buildAnalysisDataCollection_()
: MzIdentMLDOMHandler
- buildAnalysisProtocolCollection_()
: MzIdentMLDOMHandler
- buildAnalysisSoftwareList_()
: MzIdentMLDOMHandler
- buildCvList_()
: MzIdentMLDOMHandler
- buildEnclosedCV_()
: MzIdentMLDOMHandler
- buildingISDGroups_()
: ProteinResolver
- buildingMSDGroups_()
: ProteinResolver
- buildInputDataCollection_()
: MzIdentMLDOMHandler
- buildResidueNames_()
: ResidueDB
- buildRoundPackages()
: TOPPASVertex
- buildSequenceCollection_()
: MzIdentMLDOMHandler
- buildVectorIndex_()
: IsobaricNormalizer
- buttongroup_
: MetaInfoVisualizer
- ByteOrder
: Base64
- BYTEORDER_BIGENDIAN
: Base64
- BYTEORDER_LITTLEENDIAN
: Base64
- bzerror_
: Bzip2Ifstream
- bzip2_
: Bzip2InputStream
- bzip2file_
: Bzip2Ifstream
- Bzip2Ifstream()
: Bzip2Ifstream
- Bzip2InputStream()
: Bzip2InputStream