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MRMTransitionGroupPicker Member List

This is the complete list of members for MRMTransitionGroupPicker, including all inherited members.

background_subtraction_MRMTransitionGroupPickerprotected
calculateBgEstimation_(const RichPeakChromatogram &chromatogram, double best_left, double best_right)MRMTransitionGroupPickerprotected
check_defaults_DefaultParamHandlerprotected
compute_peak_quality_MRMTransitionGroupPickerprotected
computeQuality_(MRMTransitionGroup< SpectrumT, TransitionT > &transition_group, std::vector< SpectrumT > &picked_chroms, const int chr_idx, const double best_left, const double best_right, String &outlier)MRMTransitionGroupPickerinlineprotected
createMRMFeature(MRMTransitionGroup< SpectrumT, TransitionT > &transition_group, std::vector< SpectrumT > &picked_chroms, int &chr_idx, int &peak_idx)MRMTransitionGroupPickerinline
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
error_name_DefaultParamHandlerprotected
findLargestPeak(std::vector< RichPeakChromatogram > &picked_chroms, int &chr_idx, int &peak_idx)MRMTransitionGroupPicker
getDefaults() const DefaultParamHandler
getName() const DefaultParamHandler
getParameters() const DefaultParamHandler
getSubsections() const DefaultParamHandler
min_peak_width_MRMTransitionGroupPickerprotected
min_qual_MRMTransitionGroupPickerprotected
MRMTransitionGroupPicker()MRMTransitionGroupPicker
operator=(const MRMTransitionGroupPicker &rhs)MRMTransitionGroupPickerprotected
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) const DefaultParamHandlervirtual
param_DefaultParamHandlerprotected
pickTransitionGroup(MRMTransitionGroup< SpectrumT, TransitionT > &transition_group)MRMTransitionGroupPickerinline
prepareMasterContainer_(const SpectrumT &ref_chromatogram, SpectrumT &master_peak_container, double best_left, double best_right)MRMTransitionGroupPickerinlineprotected
recalculate_peaks_MRMTransitionGroupPickerprotected
recalculate_peaks_max_z_MRMTransitionGroupPickerprotected
recalculatePeakBorders_(std::vector< SpectrumT > &picked_chroms, double &best_left, double &best_right, double max_z)MRMTransitionGroupPickerinlineprotected
remove_overlapping_features(std::vector< SpectrumT > &picked_chroms, double best_left, double best_right)MRMTransitionGroupPickerinline
resampleChromatogram_(const SpectrumT &chromatogram, SpectrumT &master_peak_container, double best_left, double best_right)MRMTransitionGroupPickerinlineprotected
RichPeakChromatogram typedefMRMTransitionGroupPicker
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
stop_after_feature_MRMTransitionGroupPickerprotected
stop_after_intensity_ratio_MRMTransitionGroupPickerprotected
subsections_DefaultParamHandlerprotected
updateMembers_()MRMTransitionGroupPickerprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~MRMTransitionGroupPicker()MRMTransitionGroupPicker

OpenMS / TOPP release 2.0.0 Documentation generated on Wed Mar 30 2016 16:18:44 using doxygen 1.8.5