35 #ifndef OPENMS_METADATA_MSQUANTIFICATIONS_H
36 #define OPENMS_METADATA_MSQUANTIFICATIONS_H
60 enum QUANT_TYPES {MS1LABEL = 0, MS2LABEL, LABELFREE, SIZE_OF_QUANT_TYPES};
61 static const std::string NamesOfQuantTypes[SIZE_OF_QUANT_TYPES];
101 cv_params_(rhs.cv_params_)
159 std::vector<std::pair<String, double> >
mods_;
220 const std::vector<DataProcessing> getDataProcessingList()
const;
221 const std::vector<Assay> & getAssays()
const;
222 std::vector<Assay> & getAssays();
224 const std::vector<ConsensusMap> & getConsensusMaps()
const;
225 std::vector<ConsensusMap> & getConsensusMaps();
226 void setConsensusMaps(
const std::vector<ConsensusMap> & );
227 const std::vector<FeatureMap > & getFeatureMaps()
const;
230 void setDataProcessingList(std::vector<DataProcessing> & dpl);
234 void registerExperiment(
MSExperiment<Peak1D> & exp, std::vector<std::vector<std::pair<String, double> > > labels);
235 void registerExperiment(
ExperimentalSettings & es, std::vector<DataProcessing>& dp, std::vector<std::vector<std::pair<String, double> > > labels = (std::vector<std::vector<std::pair<String, double> > >()));
249 #endif // OPENMS_METADATA_MSQUANTIFICATIONS_H
Assay(const Assay &rhs)
Definition: MSQuantifications.h:134
A more convenient string class.
Definition: String.h:57
AnalysisSummary()
Definition: MSQuantifications.h:96
std::vector< ConsensusMap > consensus_maps_
Definition: MSQuantifications.h:240
Representation of controlled vocabulary term list.
Definition: CVTermList.h:54
CVTermList cv_params_
Definition: MSQuantifications.h:123
Definition: MSQuantifications.h:127
std::vector< DataProcessing > data_processings_
Definition: MSQuantifications.h:243
A container for features.
Definition: FeatureMap.h:93
A container for consensus elements.
Definition: ConsensusMap.h:72
String uid_
Definition: MSQuantifications.h:158
MetaInfo user_params_
Definition: MSQuantifications.h:122
AnalysisSummary & operator=(const AnalysisSummary &rhs)
Definition: MSQuantifications.h:111
QUANT_TYPES quant_type_
Definition: MSQuantifications.h:124
virtual ~AnalysisSummary()
Definition: MSQuantifications.h:107
std::vector< ExperimentalSettings > raw_files_
Definition: MSQuantifications.h:160
Definition: MSQuantifications.h:51
Assay()
Definition: MSQuantifications.h:130
AnalysisSummary analysis_summary_
Definition: MSQuantifications.h:238
std::vector< FeatureMap > feature_maps_
Definition: MSQuantifications.h:241
QUANT_TYPES
Definition: MSQuantifications.h:60
virtual ~Assay()
Definition: MSQuantifications.h:142
std::vector< Assay > assays_
Definition: MSQuantifications.h:242
Definition: MSQuantifications.h:94
std::vector< MetaInfo > bibliographic_reference_
Definition: MSQuantifications.h:239
std::map< size_t, FeatureMap > feature_maps_
Definition: MSQuantifications.h:161
std::vector< std::pair< String, double > > mods_
Definition: MSQuantifications.h:159
Description of the experimental settings.
Definition: ExperimentalSettings.h:59
Assay & operator=(const Assay &rhs)
Definition: MSQuantifications.h:146
AnalysisSummary(const AnalysisSummary &rhs)
Definition: MSQuantifications.h:100