#include <OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h>
Static Public Member Functions | |
static void | applyFixedModifications (const std::vector< ResidueModification >::const_iterator &fixed_mods_begin, const std::vector< ResidueModification >::const_iterator &fixed_mods_end, AASequence &peptide) |
static void | applyVariableModifications (const std::vector< ResidueModification >::const_iterator &var_mods_begin, const std::vector< ResidueModification >::const_iterator &var_mods_end, const AASequence &peptide, Size max_variable_mods_per_peptide, std::vector< AASequence > &all_modified_peptides, bool keep_unmodified=true) |
Static Protected Member Functions | |
static void | recurseAndGenerateVariableModifiedPeptides_ (const std::vector< int > &subset_indices, const std::map< int, std::vector< ResidueModification > > &map_compatibility, int depth, const AASequence ¤t_peptide, std::vector< AASequence > &modified_peptides) |
static void | applyAtMostOneVariableModification_ (const std::vector< ResidueModification >::const_iterator &var_mods_begin, const std::vector< ResidueModification >::const_iterator &var_mods_end, const AASequence &peptide, std::vector< AASequence > &all_modified_peptides, bool keep_unmodified=true) |
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Referenced by SimpleSearchEngine::main_().
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Referenced by SimpleSearchEngine::main_().
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staticprotected |
OpenMS / TOPP release 2.0.0 | Documentation generated on Wed Mar 30 2016 16:18:44 using doxygen 1.8.5 |