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Modules
Here is a list of all modules:
[detail level 12]
oConceptOpenMS concepts (types, macros, ...)
|oClass test macrosThese macros are used by the test programs in the subdirectory OpenMS/source/TEST
|oExceptionsExceptions
|\Condition macrosMacros used for to enforce preconditions and postconditions
oSystemVery basic functionality like file system or stopwatch
oDatastructuresAuxiliary datastructures
oMathMath functions and classes
|oStatistics functionsVarious statistical functions
|\Misc functionsMath functions
oKernelKernel datastructures
|oComparatorUtilsA collection of utilities for comparators
|\RangeUtilsPredicates for range operations
oFormatIO classes
|\File IOFile IO classes
oMetadataClasses that capture meta data about a MS or HPLC-MS experiment
oChemistry
oSpectrum ComparisonThe classes within this group are used to compare single spectra, by reporting a similarity value
oSpectrum filtersThis group contains filtering classes for spectra
|oSpectra PreprocessorsThe spectra preprocessors filter the spectra with different criteria
|oSpectra FiltersSpectra filters report single values of spectra e.g. the TIC
|\Peak MarkerThese classes mark peaks according to different criteria
oAnalysisHigh-level analysis like PeakPicking, Quantitation, Identification, MapAlignment
|oSignalProcessingSignal processing classes (noise estimation, noise filters, baseline filters)
|oPeakPickingClasses for the transformation of raw ms data into peak data
|oFeatureFinderThe feature detection algorithms
|oMapAlignmentThe map alignment algorithms
|oFeatureGroupingThe feature grouping
|oIdentificationProtein and peptide identification classes
|\ClusteringThis class contains SpectraClustering classes These classes are components for clustering all kinds of data for which a distance relation, normalizable in the range of [0,1], is available. Mainly this will be data for which there is a corresponding CompareFunctor given (e.g. PeakSpectrum) that is yielding the similarity normalized in the range of [0,1] of such two elements, so it can easily converted to the needed distances
oVisualVisualization classes
|oSpectrum visualization widgetsSpectrum visualization widgets
|oTOPPViewGUI elements for TOPPView
|oTOPPASGUI elements for TOPPAS
|\DialogsDialogs for user interaction
\SimulationSimulation classes

OpenMS / TOPP release 2.0.0 Documentation generated on Wed Mar 30 2016 16:19:07 using doxygen 1.8.5