Warning: Permanently added '98.82.36.51' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8114718-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64 Version: 1.0 PID: 55347 Logging PID: 55348 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8114718, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'd2a118449ddff723d0b55704e51daf6cfa83f2e1', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/cython-numpy-scipy-rebuild.checker/moose', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'moose', 'package_version': '3.1.5-22', 'project_dirname': 'cython-numpy-scipy-rebuild.checker', 'project_name': 'cython-numpy-scipy-rebuild.checker', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/cython-numpy-scipy-rebuild.checker/fedora-rawhide-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'psimovec/cython-numpy-scipy-rebuild.checker--psimovec', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'psimovec', 'tags': [], 'task_id': '8114718-fedora-rawhide-aarch64', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/cython-numpy-scipy-rebuild.checker/moose /var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/cython-numpy-scipy-rebuild.checker/moose', '/var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose'... Running: git checkout d2a118449ddff723d0b55704e51daf6cfa83f2e1 -- cmd: ['git', 'checkout', 'd2a118449ddff723d0b55704e51daf6cfa83f2e1', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose rc: 0 stdout: stderr: Note: switching to 'd2a118449ddff723d0b55704e51daf6cfa83f2e1'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at d2a1184 automatic import of moose Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading moose-core-3.1.5.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o moose-core-3.1.5.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/cython-numpy-scipy-rebuild.checker/moose/moose-core-3.1.5.tar.gz/md5/b5f0b53b46ef45d55caf4cdae3dbd256/moose-core-3.1.5.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 2721k 100 2721k 0 0 115M 0 --:--:-- --:--:-- --:--:-- 120M INFO: Reading stdout from command: md5sum moose-core-3.1.5.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose/moose.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728320330.242712 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose/moose.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728320330.242712 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose/moose.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1728320330.242712/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1728320330.242712/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/e4fca2b28852db902c98b90449a9c023a71b79ad7401b7bf408a014991b85e74/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/e4fca2b28852db902c98b90449a9c023a71b79ad7401b7bf408a014991b85e74/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1728320330.242712/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc42.aarch64 rpm-sequoia-1.7.0-2.fc41.aarch64 dnf5-5.2.6.2-1.fc42.aarch64 dnf5-plugins-5.2.6.2-1.fc42.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 113.7 KiB/s | 7.8 KiB | 00m00s Copr repository 100% | 80.1 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 646.7 KiB/s | 21.3 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 5.2.32-2.fc42 fedora 8.3 MiB bzip2 aarch64 1.0.8-19.fc41 fedora 427.6 KiB coreutils aarch64 9.5-10.fc42 fedora 20.8 MiB cpio aarch64 2.15-2.fc41 fedora 1.2 MiB diffutils aarch64 3.10-8.fc41 fedora 2.1 MiB fedora-release-common noarch 42-0.3 fedora 19.4 KiB findutils aarch64 1:4.10.0-4.fc41 fedora 2.1 MiB gawk aarch64 5.3.0-4.fc41 fedora 4.2 MiB glibc-minimal-langpack aarch64 2.40.9000-1.fc42 fedora 0.0 B grep aarch64 3.11-9.fc41 fedora 1.1 MiB gzip aarch64 1.13-2.fc41 fedora 488.9 KiB info aarch64 7.1.1-1.fc42 fedora 613.6 KiB patch aarch64 2.7.6-25.fc41 fedora 390.6 KiB redhat-rpm-config noarch 296-1.fc42 fedora 186.6 KiB rpm-build aarch64 4.19.94-1.fc42 fedora 1.4 MiB sed aarch64 4.9-3.fc41 fedora 1.0 MiB shadow-utils aarch64 2:4.16.0-4.fc42 fedora 7.3 MiB tar aarch64 2:1.35-4.fc41 fedora 3.1 MiB unzip aarch64 6.0-64.fc41 fedora 726.7 KiB util-linux aarch64 2.40.2-8.fc42 fedora 16.9 MiB which aarch64 2.21-42.fc41 fedora 248.2 KiB xz aarch64 1:5.6.3-1.fc42 fedora 1.5 MiB Installing dependencies: add-determinism aarch64 0.3.6-1.fc41 fedora 2.0 MiB alternatives aarch64 1.30-1.fc41 fedora 218.3 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs aarch64 4.0.2-1.fc41 fedora 547.4 KiB authselect aarch64 1.5.0-7.fc41 fedora 309.5 KiB authselect-libs aarch64 1.5.0-7.fc41 fedora 931.9 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils aarch64 2.43.1-1.fc42 fedora 33.0 MiB build-reproducibility-srpm-macros noarch 0.3.6-1.fc41 fedora 735.0 B bzip2-libs aarch64 1.0.8-19.fc41 fedora 200.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-2.fc42 fedora 2.6 MiB coreutils-common aarch64 9.5-10.fc42 fedora 11.2 MiB cracklib aarch64 2.9.11-6.fc41 fedora 935.0 KiB crypto-policies noarch 20240927-1.git93b7251.fc42 fedora 136.8 KiB curl aarch64 8.10.1-2.fc42 fedora 581.3 KiB cyrus-sasl-lib aarch64 2.1.28-27.fc41 fedora 3.1 MiB debugedit aarch64 5.0-17.fc41 fedora 499.2 KiB dwz aarch64 0.15-7.fc41 fedora 386.8 KiB ed aarch64 1.20.2-2.fc41 fedora 282.8 KiB efi-srpm-macros noarch 5-12.fc41 fedora 40.1 KiB elfutils aarch64 0.191-8.fc41 fedora 4.9 MiB elfutils-debuginfod-client aarch64 0.191-8.fc41 fedora 396.9 KiB elfutils-default-yama-scope noarch 0.191-8.fc41 fedora 1.8 KiB elfutils-libelf aarch64 0.191-8.fc41 fedora 1.3 MiB elfutils-libs aarch64 0.191-8.fc41 fedora 938.3 KiB fedora-gpg-keys noarch 42-0.2 fedora 126.4 KiB fedora-release noarch 42-0.3 fedora 0.0 B fedora-release-identity-basic noarch 42-0.3 fedora 694.0 B fedora-repos noarch 42-0.2 fedora 4.9 KiB fedora-repos-rawhide noarch 42-0.2 fedora 2.2 KiB file aarch64 5.45-7.fc41 fedora 267.5 KiB file-libs aarch64 5.45-7.fc41 fedora 10.0 MiB filesystem aarch64 3.18-29.fc42 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-1.fc42 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal aarch64 15.1-2.fc42 fedora 13.0 MiB gdbm aarch64 1:1.23-7.fc41 fedora 928.5 KiB gdbm-libs aarch64 1:1.23-7.fc41 fedora 426.0 KiB ghc-srpm-macros noarch 1.9.2-1.fc42 fedora 779.0 B glibc aarch64 2.40.9000-1.fc42 fedora 9.2 MiB glibc-common aarch64 2.40.9000-1.fc42 fedora 2.6 MiB glibc-gconv-extra aarch64 2.40.9000-1.fc42 fedora 49.2 MiB gmp aarch64 1:6.3.0-2.fc41 fedora 722.0 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB jansson aarch64 2.13.1-10.fc41 fedora 220.5 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs aarch64 1.6.3-4.fc41 fedora 226.4 KiB krb5-libs aarch64 1.21.3-2.fc41 fedora 3.3 MiB libacl aarch64 2.3.2-2.fc41 fedora 196.1 KiB libarchive aarch64 3.7.6-1.fc42 fedora 974.8 KiB libattr aarch64 2.5.2-4.fc41 fedora 196.6 KiB libblkid aarch64 2.40.2-8.fc42 fedora 418.6 KiB libbrotli aarch64 1.1.0-5.fc41 fedora 1.1 MiB libcap aarch64 2.70-4.fc41 fedora 1.4 MiB libcap-ng aarch64 0.8.5-3.fc41 fedora 417.2 KiB libcom_err aarch64 1.47.1-3.fc41 fedora 239.3 KiB libcurl aarch64 8.10.1-2.fc42 fedora 858.4 KiB libeconf aarch64 0.6.2-3.fc41 fedora 206.1 KiB libevent aarch64 2.1.12-14.fc41 fedora 1.5 MiB libfdisk aarch64 2.40.2-8.fc42 fedora 482.9 KiB libffi aarch64 3.4.6-3.fc42 fedora 282.4 KiB libgcc aarch64 14.2.1-4.fc42 fedora 350.2 KiB libgomp aarch64 14.2.1-4.fc42 fedora 567.3 KiB libidn2 aarch64 2.3.7-2.fc41 fedora 457.2 KiB libmount aarch64 2.40.2-8.fc42 fedora 483.9 KiB libnghttp2 aarch64 1.63.0-1.fc42 fedora 262.2 KiB libnsl2 aarch64 2.0.1-2.fc41 fedora 222.0 KiB libpkgconf aarch64 2.3.0-1.fc42 fedora 198.1 KiB libpsl aarch64 0.21.5-4.fc41 fedora 196.6 KiB libpwquality aarch64 1.4.5-11.fc41 fedora 1.1 MiB libselinux aarch64 3.7-6.fc42 fedora 265.1 KiB libsemanage aarch64 3.7-3.fc42 fedora 361.6 KiB libsepol aarch64 3.7-3.fc42 fedora 873.9 KiB libsmartcols aarch64 2.40.2-8.fc42 fedora 288.5 KiB libssh aarch64 0.11.1-1.fc42 fedora 649.6 KiB libssh-config noarch 0.11.1-1.fc42 fedora 277.0 B libstdc++ aarch64 14.2.1-4.fc42 fedora 2.8 MiB libtasn1 aarch64 4.19.0-9.fc41 fedora 283.8 KiB libtirpc aarch64 1.3.5-0.fc41 fedora 274.8 KiB libtool-ltdl aarch64 2.4.7-12.fc41 fedora 222.2 KiB libunistring aarch64 1.1-8.fc41 fedora 1.8 MiB libuuid aarch64 2.40.2-8.fc42 fedora 197.5 KiB libverto aarch64 0.3.2-9.fc41 fedora 197.5 KiB libxcrypt aarch64 4.4.36-7.fc41 fedora 399.0 KiB libxml2 aarch64 2.12.8-2.fc41 fedora 2.1 MiB libzstd aarch64 1.5.6-2.fc41 fedora 796.0 KiB lua-libs aarch64 5.4.6-6.fc41 fedora 393.1 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs aarch64 1.10.0-1.fc41 fedora 261.6 KiB mpfr aarch64 4.2.1-5.fc41 fedora 818.9 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs aarch64 6.5-2.20240629.fc41 fedora 2.2 MiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap aarch64 2.6.8-5.fc41 fedora 952.3 KiB openssl-libs aarch64 1:3.2.2-8.fc42 fedora 7.2 MiB p11-kit aarch64 0.25.5-3.fc41 fedora 2.6 MiB p11-kit-trust aarch64 0.25.5-3.fc41 fedora 655.6 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam aarch64 1.6.1-6.fc42 fedora 11.0 MiB pam-libs aarch64 1.6.1-6.fc42 fedora 607.3 KiB pcre2 aarch64 10.44-1.fc41.1 fedora 905.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf aarch64 2.3.0-1.fc42 fedora 240.6 KiB pkgconf-m4 noarch 2.3.0-1.fc42 fedora 14.4 KiB pkgconf-pkg-config aarch64 2.3.0-1.fc42 fedora 990.0 B popt aarch64 1.19-7.fc41 fedora 272.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.15.1-1.fc42 fedora 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 fedora 500.0 B qt6-srpm-macros noarch 6.7.2-3.fc41 fedora 456.0 B readline aarch64 8.2-11.fc42 fedora 753.3 KiB rpm aarch64 4.19.94-1.fc42 fedora 3.9 MiB rpm-build-libs aarch64 4.19.94-1.fc42 fedora 262.7 KiB rpm-libs aarch64 4.19.94-1.fc42 fedora 798.0 KiB rpm-sequoia aarch64 1.7.0-2.fc41 fedora 2.3 MiB rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs aarch64 3.46.0-4.fc41 fedora 1.6 MiB systemd-libs aarch64 256.5-1.fc42 fedora 2.5 MiB util-linux-core aarch64 2.40.2-8.fc42 fedora 6.2 MiB xxhash-libs aarch64 0.8.2-4.fc42 fedora 212.3 KiB xz-libs aarch64 1:5.6.3-1.fc42 fedora 266.3 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip aarch64 3.0-41.fc41 fedora 1.1 MiB zlib-ng-compat aarch64 2.1.7-3.fc42 fedora 261.8 KiB zstd aarch64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 53 MiB. Need to download 0 B. After this operation, 303 MiB extra will be used (install 303 MiB, remove 0 B). [1/1] tar-2:1.35-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/2] bzip2-0:1.0.8-19.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/3] redhat-rpm-config-0:296-1.fc42.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [3/3] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/4] rpm-build-0:4.19.94-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [4/4] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/5] unzip-0:6.0-64.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded 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Already downloaded -------------------------------------------------------------------------------- [153/153] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction Importing PGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing PGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing PGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing PGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. [ 1/155] Verify package files 100% | 711.0 B/s | 153.0 B | 00m00s [ 2/155] Prepare transaction 100% | 2.4 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:14.2.1-4. 100% | 171.8 MiB/s | 351.9 KiB | 00m00s [ 4/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/155] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 6/155] Installing fedora-release-ide 100% | 929.7 KiB/s | 952.0 B | 00m00s [ 7/155] Installing fedora-gpg-keys-0: 100% | 33.6 MiB/s | 172.2 KiB | 00m00s [ 8/155] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 9/155] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/155] Installing fedora-release-com 100% | 23.1 MiB/s | 23.7 KiB | 00m00s [ 11/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/155] Installing setup-0:2.15.0-5.f 100% | 41.7 MiB/s | 726.1 KiB | 00m00s [ 13/155] Installing filesystem-0:3.18- 100% | 2.2 MiB/s | 212.6 KiB | 00m00s [ 14/155] Installing 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warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 19/155] Installing glibc-0:2.40.9000- 100% | 243.8 MiB/s | 9.3 MiB | 00m00s [ 20/155] Installing bash-0:5.2.32-2.fc 100% | 296.9 MiB/s | 8.3 MiB | 00m00s [ 21/155] Installing glibc-common-0:2.4 100% | 257.0 MiB/s | 2.6 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 22/155] Installing glibc-gconv-extra- 100% | 541.3 MiB/s | 49.3 MiB | 00m00s [ 23/155] Installing zlib-ng-compat-0:2 100% | 256.4 MiB/s | 262.6 KiB | 00m00s [ 24/155] Installing bzip2-libs-0:1.0.8 100% | 197.1 MiB/s | 201.9 KiB | 00m00s [ 25/155] 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218.1 MiB/s | 223.4 KiB | 00m00s [101/155] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [102/155] Installing pkgconf-pkg-config 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [103/155] Installing coreutils-common-0 100% | 294.5 MiB/s | 11.2 MiB | 00m00s [104/155] Installing openssl-libs-1:3.2 100% | 313.5 MiB/s | 7.2 MiB | 00m00s [105/155] Installing coreutils-0:9.5-10 100% | 442.6 MiB/s | 20.8 MiB | 00m00s [106/155] Installing ca-certificates-0: 100% | 1.4 MiB/s | 2.4 MiB | 00m02s [107/155] Installing krb5-libs-0:1.21.3 100% | 257.4 MiB/s | 3.3 MiB | 00m00s [108/155] Installing libarchive-0:3.7.6 100% | 238.5 MiB/s | 976.8 KiB | 00m00s [109/155] Installing libtirpc-0:1.3.5-0 100% | 135.0 MiB/s | 276.5 KiB | 00m00s [110/155] Installing gzip-0:1.13-2.fc41 100% | 160.9 MiB/s | 494.4 KiB | 00m00s [111/155] Installing authselect-libs-0: 100% | 132.1 MiB/s | 946.8 KiB | 00m00s [112/155] Installing cracklib-0:2.9.11- 100% | 154.0 MiB/s | 946.3 KiB | 00m00s [113/155] Installing libpwquality-0:1.4 100% | 158.2 MiB/s | 1.1 MiB | 00m00s [114/155] Installing libnsl2-0:2.0.1-2. 100% | 109.0 MiB/s | 223.2 KiB | 00m00s [115/155] Installing pam-0:1.6.1-6.fc42 100% | 367.9 MiB/s | 11.0 MiB | 00m00s [116/155] Installing libssh-0:0.11.1-1. 100% | 212.1 MiB/s | 651.7 KiB | 00m00s [117/155] Installing rpm-sequoia-0:1.7. 100% | 287.1 MiB/s | 2.3 MiB | 00m00s [118/155] Installing rpm-libs-0:4.19.94 100% | 260.3 MiB/s | 799.5 KiB | 00m00s [119/155] Installing rpm-build-libs-0:4 100% | 128.7 MiB/s | 263.6 KiB | 00m00s [120/155] Installing libevent-0:2.1.12- 100% | 304.7 MiB/s | 1.5 MiB | 00m00s [121/155] Installing openldap-0:2.6.8-5 100% | 233.4 MiB/s | 956.1 KiB | 00m00s [122/155] Installing libcurl-0:8.10.1-2 100% | 279.8 MiB/s | 859.5 KiB | 00m00s [123/155] Installing elfutils-debuginfo 100% | 194.8 MiB/s | 398.9 KiB | 00m00s [124/155] Installing binutils-0:2.43.1- 100% | 343.7 MiB/s | 33.0 MiB | 00m00s [125/155] Installing elfutils-0:0.191-8 100% | 353.9 MiB/s | 5.0 MiB | 00m00s [126/155] Installing gdb-minimal-0:15.1 100% | 332.8 MiB/s | 13.0 MiB | 00m00s [127/155] Installing debugedit-0:5.0-17 100% | 245.1 MiB/s | 502.0 KiB | 00m00s [128/155] Installing curl-0:8.10.1-2.fc 100% | 43.9 MiB/s | 583.8 KiB | 00m00s [129/155] Installing rpm-0:4.19.94-1.fc 100% | 146.0 MiB/s | 3.4 MiB | 00m00s [130/155] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [131/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [132/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [133/155] Installing rust-srpm-macros-0 100% | 5.4 MiB/s | 5.6 KiB | 00m00s [134/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [135/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [136/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [137/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [138/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [139/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [140/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [141/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [142/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [143/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [144/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [145/155] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [146/155] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [147/155] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [148/155] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [149/155] Installing redhat-rpm-config- 100% | 62.9 MiB/s | 193.2 KiB | 00m00s [150/155] Installing rpm-build-0:4.19.9 100% | 349.3 MiB/s | 1.4 MiB | 00m00s [151/155] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [152/155] Installing util-linux-0:2.40. 100% | 360.7 MiB/s | 17.0 MiB | 00m00s [153/155] Installing authselect-0:1.5.0 100% | 102.2 MiB/s | 313.9 KiB | 00m00s [154/155] Installing which-0:2.21-42.fc 100% | 122.2 MiB/s | 250.4 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [155/155] Installing info-0:7.1.1-1.fc4 100% | 271.0 KiB/s | 614.1 KiB | 00m02s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-1.fc41.aarch64 alternatives-1.30-1.fc41.aarch64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.aarch64 authselect-1.5.0-7.fc41.aarch64 authselect-libs-1.5.0-7.fc41.aarch64 basesystem-11-21.fc41.noarch bash-5.2.32-2.fc42.aarch64 binutils-2.43.1-1.fc42.aarch64 build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch bzip2-1.0.8-19.fc41.aarch64 bzip2-libs-1.0.8-19.fc41.aarch64 ca-certificates-2024.2.69_v8.0.401-2.fc42.noarch coreutils-9.5-10.fc42.aarch64 coreutils-common-9.5-10.fc42.aarch64 cpio-2.15-2.fc41.aarch64 cracklib-2.9.11-6.fc41.aarch64 crypto-policies-20240927-1.git93b7251.fc42.noarch curl-8.10.1-2.fc42.aarch64 cyrus-sasl-lib-2.1.28-27.fc41.aarch64 debugedit-5.0-17.fc41.aarch64 diffutils-3.10-8.fc41.aarch64 dwz-0.15-7.fc41.aarch64 ed-1.20.2-2.fc41.aarch64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.aarch64 elfutils-debuginfod-client-0.191-8.fc41.aarch64 elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.aarch64 elfutils-libs-0.191-8.fc41.aarch64 fedora-gpg-keys-42-0.2.noarch fedora-release-42-0.3.noarch fedora-release-common-42-0.3.noarch fedora-release-identity-basic-42-0.3.noarch fedora-repos-42-0.2.noarch fedora-repos-rawhide-42-0.2.noarch file-5.45-7.fc41.aarch64 file-libs-5.45-7.fc41.aarch64 filesystem-3.18-29.fc42.aarch64 findutils-4.10.0-4.fc41.aarch64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.aarch64 gdb-minimal-15.1-2.fc42.aarch64 gdbm-1.23-7.fc41.aarch64 gdbm-libs-1.23-7.fc41.aarch64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-1.fc42.aarch64 glibc-common-2.40.9000-1.fc42.aarch64 glibc-gconv-extra-2.40.9000-1.fc42.aarch64 glibc-minimal-langpack-2.40.9000-1.fc42.aarch64 gmp-6.3.0-2.fc41.aarch64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-105ef944-65ca83d1 gpg-pubkey-31645531-66b6dccf gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.aarch64 gzip-1.13-2.fc41.aarch64 info-7.1.1-1.fc42.aarch64 jansson-2.13.1-10.fc41.aarch64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.aarch64 krb5-libs-1.21.3-2.fc41.aarch64 libacl-2.3.2-2.fc41.aarch64 libarchive-3.7.6-1.fc42.aarch64 libattr-2.5.2-4.fc41.aarch64 libblkid-2.40.2-8.fc42.aarch64 libbrotli-1.1.0-5.fc41.aarch64 libcap-2.70-4.fc41.aarch64 libcap-ng-0.8.5-3.fc41.aarch64 libcom_err-1.47.1-3.fc41.aarch64 libcurl-8.10.1-2.fc42.aarch64 libeconf-0.6.2-3.fc41.aarch64 libevent-2.1.12-14.fc41.aarch64 libfdisk-2.40.2-8.fc42.aarch64 libffi-3.4.6-3.fc42.aarch64 libgcc-14.2.1-4.fc42.aarch64 libgomp-14.2.1-4.fc42.aarch64 libidn2-2.3.7-2.fc41.aarch64 libmount-2.40.2-8.fc42.aarch64 libnghttp2-1.63.0-1.fc42.aarch64 libnsl2-2.0.1-2.fc41.aarch64 libpkgconf-2.3.0-1.fc42.aarch64 libpsl-0.21.5-4.fc41.aarch64 libpwquality-1.4.5-11.fc41.aarch64 libselinux-3.7-6.fc42.aarch64 libsemanage-3.7-3.fc42.aarch64 libsepol-3.7-3.fc42.aarch64 libsmartcols-2.40.2-8.fc42.aarch64 libssh-0.11.1-1.fc42.aarch64 libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-4.fc42.aarch64 libtasn1-4.19.0-9.fc41.aarch64 libtirpc-1.3.5-0.fc41.aarch64 libtool-ltdl-2.4.7-12.fc41.aarch64 libunistring-1.1-8.fc41.aarch64 libuuid-2.40.2-8.fc42.aarch64 libverto-0.3.2-9.fc41.aarch64 libxcrypt-4.4.36-7.fc41.aarch64 libxml2-2.12.8-2.fc41.aarch64 libzstd-1.5.6-2.fc41.aarch64 lua-libs-5.4.6-6.fc41.aarch64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.aarch64 mpfr-4.2.1-5.fc41.aarch64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.aarch64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.aarch64 openssl-libs-3.2.2-8.fc42.aarch64 p11-kit-0.25.5-3.fc41.aarch64 p11-kit-trust-0.25.5-3.fc41.aarch64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-6.fc42.aarch64 pam-libs-1.6.1-6.fc42.aarch64 patch-2.7.6-25.fc41.aarch64 pcre2-10.44-1.fc41.1.aarch64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.aarch64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.aarch64 popt-1.19-7.fc41.aarch64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.15.1-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-11.fc42.aarch64 redhat-rpm-config-296-1.fc42.noarch rpm-4.19.94-1.fc42.aarch64 rpm-build-4.19.94-1.fc42.aarch64 rpm-build-libs-4.19.94-1.fc42.aarch64 rpm-libs-4.19.94-1.fc42.aarch64 rpm-sequoia-1.7.0-2.fc41.aarch64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.aarch64 setup-2.15.0-5.fc41.noarch shadow-utils-4.16.0-4.fc42.aarch64 sqlite-libs-3.46.0-4.fc41.aarch64 systemd-libs-256.5-1.fc42.aarch64 tar-1.35-4.fc41.aarch64 unzip-6.0-64.fc41.aarch64 util-linux-2.40.2-8.fc42.aarch64 util-linux-core-2.40.2-8.fc42.aarch64 which-2.21-42.fc41.aarch64 xxhash-libs-0.8.2-4.fc42.aarch64 xz-5.6.3-1.fc42.aarch64 xz-libs-5.6.3-1.fc42.aarch64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.aarch64 zlib-ng-compat-2.1.7-3.fc42.aarch64 zstd-1.5.6-2.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721260800 Wrote: /builddir/build/SRPMS/moose-3.1.5-22.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1728320330.242712/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-fr3izqqj/moose/moose.spec) Config(child) 0 minutes 18 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/moose-3.1.5-22.fc42.src.rpm) Config(fedora-rawhide-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1728320330.242712/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1728320330.242712/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1728320330.242712/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc42.aarch64 rpm-sequoia-1.7.0-2.fc41.aarch64 dnf5-5.2.6.2-1.fc42.aarch64 dnf5-plugins-5.2.6.2-1.fc42.aarch64 Finish: chroot init Start: build phase for moose-3.1.5-22.fc42.src.rpm Start: build setup for moose-3.1.5-22.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721260800 Wrote: /builddir/build/SRPMS/moose-3.1.5-22.fc42.src.rpm Updating and loading repositories: fedora 100% | 118.8 KiB/s | 7.8 KiB | 00m00s Copr repository 100% | 76.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "tar-2:1.35-4.fc41.aarch64" is already installed. Package Arch Version Repository Size Installing: checksec noarch 2.7.1-2.fc41 fedora 93.9 KiB cmake aarch64 3.28.3-7.fc41 fedora 28.0 MiB gcc-c++ aarch64 14.2.1-4.fc42 fedora 35.0 MiB git-core aarch64 2.46.2-1.fc42 fedora 22.8 MiB gsl-devel aarch64 2.7.1-11.fc41 fedora 1.6 MiB hdf5-devel aarch64 1.12.1-20.fc41 fedora 3.8 MiB libsbml-devel aarch64 5.20.4-1.fc42 fedora 37.2 MiB make aarch64 1:4.4.1-9.fc42 fedora 1.8 MiB muParser-devel aarch64 2.3.4-5.fc41 fedora 125.7 KiB ncurses-devel aarch64 6.5-2.20240629.fc41 fedora 870.1 KiB openssl aarch64 1:3.2.2-8.fc42 fedora 1.7 MiB procps-ng aarch64 4.0.4-4.fc41 fedora 4.1 MiB python3-devel aarch64 3.13.0~rc3-1.fc42 fedora 1.8 MiB python3-libsbml aarch64 5.20.4-1.fc42 fedora 32.9 MiB python3-numpy aarch64 1:1.26.4-8.fc41 fedora 41.2 MiB python3-setuptools noarch 69.2.0-8.fc41 fedora 7.2 MiB readline-devel aarch64 8.2-11.fc42 fedora 553.0 KiB rsync aarch64 3.3.0-4.fc42 fedora 820.1 KiB tinyxml-devel aarch64 2.6.2-30.fc41 fedora 917.4 KiB zlib-ng-compat-devel aarch64 2.1.7-3.fc42 fedora 106.8 KiB Installing dependencies: annobin-docs noarch 12.70-1.fc42 fedora 97.7 KiB annobin-plugin-gcc aarch64 12.70-1.fc42 fedora 1.1 MiB autoconf noarch 2.72-3.fc41 fedora 2.8 MiB automake noarch 1.16.5-17.fc41 fedora 1.7 MiB cmake-data noarch 3.28.3-7.fc41 fedora 8.0 MiB cmake-filesystem aarch64 3.28.3-7.fc41 fedora 0.0 B cmake-rpm-macros noarch 3.28.3-7.fc41 fedora 7.5 KiB cpp aarch64 14.2.1-4.fc42 fedora 31.8 MiB emacs-filesystem noarch 1:30.0-3.fc41 fedora 0.0 B expat aarch64 2.6.3-1.fc42 fedora 539.6 KiB flexiblas aarch64 3.4.4-3.fc41 fedora 48.5 KiB flexiblas-netlib aarch64 3.4.4-3.fc41 fedora 9.8 MiB flexiblas-openblas-openmp aarch64 3.4.4-3.fc41 fedora 195.4 KiB gcc aarch64 14.2.1-4.fc42 fedora 93.8 MiB gcc-gfortran aarch64 14.2.1-4.fc42 fedora 33.9 MiB gcc-plugin-annobin aarch64 14.2.1-4.fc42 fedora 197.1 KiB glibc-devel aarch64 2.40.9000-1.fc42 fedora 2.2 MiB groff-base aarch64 1.23.0-7.fc41 fedora 5.2 MiB gsl aarch64 2.7.1-11.fc41 fedora 3.7 MiB hdf5 aarch64 1.12.1-20.fc41 fedora 12.4 MiB jsoncpp aarch64 1.9.5-8.fc41 fedora 335.7 KiB kernel-headers aarch64 6.11.0-63.fc42 fedora 6.3 MiB less aarch64 661-2.fc41 fedora 869.2 KiB libaec aarch64 1.1.3-1.fc42 fedora 410.2 KiB libaec-devel aarch64 1.1.3-1.fc42 fedora 12.5 KiB libasan aarch64 14.2.1-4.fc42 fedora 1.6 MiB libatomic aarch64 14.2.1-4.fc42 fedora 196.9 KiB libb2 aarch64 0.98.1-12.fc41 fedora 202.2 KiB libcbor aarch64 0.11.0-2.fc41 fedora 202.0 KiB libedit aarch64 3.1-53.20240808cvs.fc41 fedora 344.2 KiB libfido2 aarch64 1.15.0-2.fc41 fedora 342.4 KiB libgfortran aarch64 14.2.1-4.fc42 fedora 1.5 MiB libmpc aarch64 1.3.1-6.fc41 fedora 280.8 KiB libsbml aarch64 5.20.4-1.fc42 fedora 9.6 MiB libstdc++-devel aarch64 14.2.1-4.fc42 fedora 15.1 MiB libubsan aarch64 14.2.1-4.fc42 fedora 539.3 KiB libuv aarch64 1:1.49.0-1.fc42 fedora 663.4 KiB libxcrypt-devel aarch64 4.4.36-7.fc41 fedora 30.3 KiB libxml2-devel aarch64 2.12.8-2.fc41 fedora 3.4 MiB m4 aarch64 1.4.19-10.fc41 fedora 668.7 KiB minizip-ng-compat aarch64 4.0.7-1.fc41 fedora 262.7 KiB mpdecimal aarch64 2.5.1-16.fc41 fedora 328.9 KiB muParser aarch64 2.3.4-5.fc41 fedora 550.9 KiB ncurses aarch64 6.5-2.20240629.fc41 fedora 1.7 MiB ncurses-c++-libs aarch64 6.5-2.20240629.fc41 fedora 393.7 KiB openblas aarch64 0.3.26-5.fc41 fedora 96.0 KiB openblas-openmp aarch64 0.3.26-5.fc41 fedora 19.5 MiB openssh aarch64 9.8p1-4.fc42 fedora 2.0 MiB openssh-clients aarch64 9.8p1-4.fc42 fedora 3.4 MiB perl-AutoLoader noarch 5.74-511.fc41 fedora 20.5 KiB perl-B aarch64 1.89-511.fc41 fedora 606.1 KiB perl-Carp noarch 1.54-511.fc41 fedora 46.6 KiB perl-Class-Struct noarch 0.68-511.fc41 fedora 25.4 KiB perl-Data-Dumper aarch64 2.189-512.fc41 fedora 263.8 KiB perl-Digest noarch 1.20-511.fc41 fedora 35.3 KiB perl-Digest-MD5 aarch64 2.59-5.fc41 fedora 231.9 KiB perl-DynaLoader aarch64 1.56-511.fc41 fedora 32.1 KiB perl-Encode aarch64 4:3.21-511.fc41 fedora 5.9 MiB perl-Errno aarch64 1.38-511.fc41 fedora 8.4 KiB perl-Exporter noarch 5.78-511.fc41 fedora 54.3 KiB perl-Fcntl aarch64 1.18-511.fc41 fedora 221.1 KiB perl-File-Basename noarch 2.86-511.fc41 fedora 14.0 KiB perl-File-Compare noarch 1.100.800-511.fc41 fedora 5.6 KiB perl-File-Copy noarch 2.41-511.fc41 fedora 19.6 KiB perl-File-Find noarch 1.44-511.fc41 fedora 41.9 KiB perl-File-Path noarch 2.18-511.fc41 fedora 63.5 KiB perl-File-Temp noarch 1:0.231.100-511.fc41 fedora 162.3 KiB perl-File-stat noarch 1.14-511.fc41 fedora 12.5 KiB perl-FileHandle noarch 2.05-511.fc41 fedora 9.3 KiB perl-Getopt-Long noarch 1:2.58-2.fc41 fedora 144.5 KiB perl-Getopt-Std noarch 1.14-511.fc41 fedora 11.2 KiB perl-HTTP-Tiny noarch 0.088-512.fc41 fedora 152.2 KiB perl-IO aarch64 1.55-511.fc41 fedora 319.2 KiB perl-IO-Socket-IP noarch 0.42-512.fc41 fedora 98.7 KiB perl-IO-Socket-SSL noarch 2.089-1.fc42 fedora 703.3 KiB perl-IPC-Open3 noarch 1.22-511.fc41 fedora 22.5 KiB perl-MIME-Base32 noarch 1.303-21.fc41 fedora 30.7 KiB perl-MIME-Base64 aarch64 3.16-511.fc41 fedora 222.2 KiB perl-Mozilla-CA noarch 20240924-1.fc42 fedora 10.3 KiB perl-Net-SSLeay aarch64 1.94-7.fc41 fedora 1.4 MiB perl-POSIX aarch64 2.20-511.fc41 fedora 327.3 KiB perl-PathTools aarch64 3.91-511.fc41 fedora 352.1 KiB perl-Pod-Escapes noarch 1:1.07-511.fc41 fedora 24.9 KiB perl-Pod-Perldoc noarch 3.28.01-512.fc41 fedora 163.7 KiB perl-Pod-Simple noarch 1:3.45-511.fc41 fedora 560.9 KiB perl-Pod-Usage noarch 4:2.03-511.fc41 fedora 84.8 KiB perl-Scalar-List-Utils aarch64 5:1.66-1.fc42 fedora 278.7 KiB perl-SelectSaver noarch 1.02-511.fc41 fedora 2.2 KiB perl-Socket aarch64 4:2.038-511.fc41 fedora 272.1 KiB perl-Storable aarch64 1:3.32-511.fc41 fedora 372.5 KiB perl-Symbol noarch 1.09-511.fc41 fedora 6.8 KiB perl-Term-ANSIColor noarch 5.01-512.fc41 fedora 97.5 KiB perl-Term-Cap noarch 1.18-511.fc41 fedora 29.3 KiB perl-Text-ParseWords noarch 3.31-511.fc41 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 2024.001-511.fc41 fedora 22.6 KiB perl-Thread-Queue noarch 3.14-511.fc41 fedora 28.9 KiB perl-Time-Local noarch 2:1.350-511.fc41 fedora 69.0 KiB perl-URI noarch 5.29-1.fc42 fedora 251.9 KiB perl-base noarch 2.27-511.fc41 fedora 12.5 KiB perl-constant noarch 1.33-512.fc41 fedora 26.2 KiB perl-if noarch 0.61.000-511.fc41 fedora 5.8 KiB perl-interpreter aarch64 4:5.40.0-511.fc41 fedora 302.3 KiB perl-libnet noarch 3.15-512.fc41 fedora 289.4 KiB perl-libs aarch64 4:5.40.0-511.fc41 fedora 10.9 MiB perl-locale noarch 1.12-511.fc41 fedora 6.5 KiB perl-mro aarch64 1.29-511.fc41 fedora 209.7 KiB perl-overload noarch 1.37-511.fc41 fedora 71.5 KiB perl-overloading noarch 0.02-511.fc41 fedora 4.8 KiB perl-parent noarch 1:0.242-1.fc42 fedora 10.0 KiB perl-podlators noarch 1:6.0.2-2.fc41 fedora 317.5 KiB perl-threads aarch64 1:2.40-511.fc41 fedora 263.2 KiB perl-threads-shared aarch64 1.69-511.fc41 fedora 231.8 KiB perl-vars noarch 1.05-511.fc41 fedora 3.9 KiB pyproject-rpm-macros noarch 1.15.1-1.fc42 fedora 109.2 KiB python-pip-wheel noarch 24.2-2.fc42 fedora 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 fedora 22.1 KiB python3 aarch64 3.13.0~rc3-1.fc42 fedora 211.8 KiB python3-libs aarch64 3.13.0~rc3-1.fc42 fedora 49.7 MiB python3-packaging noarch 24.1-2.fc41 fedora 422.3 KiB python3-rpm-generators noarch 14-11.fc41 fedora 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 fedora 6.4 KiB rhash aarch64 1.4.4-2.fc41 fedora 586.0 KiB tinyxml aarch64 2.6.2-30.fc41 fedora 231.0 KiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB vim-filesystem noarch 2:9.1.737-1.fc42 fedora 40.0 B xz-devel aarch64 1:5.6.3-1.fc42 fedora 255.6 KiB Transaction Summary: Installing: 146 packages Total size of inbound packages is 150 MiB. 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| 299.5 MiB/s | 35.0 MiB | 00m00s [132/148] Installing git-core-0:2.46.2- 100% | 368.1 MiB/s | 22.8 MiB | 00m00s [133/148] Installing gsl-devel-0:2.7.1- 100% | 165.2 MiB/s | 1.7 MiB | 00m00s [134/148] Installing muParser-devel-0:2 100% | 125.5 MiB/s | 128.6 KiB | 00m00s [135/148] Installing readline-devel-0:8 100% | 182.5 MiB/s | 560.5 KiB | 00m00s [136/148] Installing tinyxml-devel-0:2. 100% | 182.0 MiB/s | 932.1 KiB | 00m00s [137/148] Installing hdf5-devel-0:1.12. 100% | 257.4 MiB/s | 3.9 MiB | 00m00s [138/148] Installing annobin-plugin-gcc 100% | 64.5 MiB/s | 1.1 MiB | 00m00s [139/148] Installing gcc-plugin-annobin 100% | 10.2 MiB/s | 198.6 KiB | 00m00s [140/148] Installing libsbml-devel-0:5. 100% | 404.8 MiB/s | 37.2 MiB | 00m00s [141/148] Installing python3-devel-0:3. 100% | 139.5 MiB/s | 1.8 MiB | 00m00s [142/148] Installing python3-libsbml-0: 100% | 498.3 MiB/s | 32.9 MiB | 00m00s [143/148] Installing python3-numpy-1:1. 100% | 294.7 MiB/s | 41.6 MiB | 00m00s [144/148] Installing python3-setuptools 100% | 183.3 MiB/s | 7.3 MiB | 00m00s [145/148] Installing rsync-0:3.3.0-4.fc 100% | 67.2 MiB/s | 825.5 KiB | 00m00s [146/148] Installing procps-ng-0:4.0.4- 100% | 406.8 MiB/s | 4.1 MiB | 00m00s [147/148] Installing openssl-1:3.2.2-8. 100% | 145.5 MiB/s | 1.7 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [148/148] Installing checksec-0:2.7.1-2 100% | 397.6 KiB/s | 95.0 KiB | 00m00s Complete! Finish: build setup for moose-3.1.5-22.fc42.src.rpm Start: rpmbuild moose-3.1.5-22.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721260800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.7tPoBQ + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + test -d /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/rm -rf /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.kszfC6 + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd /builddir/build/BUILD/moose-3.1.5-build + rm -rf moose-core-3.1.5 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/moose-core-3.1.5.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd moose-core-3.1.5 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + GIT_COMMITTER_DATE=@1721260800 + GIT_AUTHOR_DATE=@1721260800 + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'moose-3.1.5 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/c570f7c057f9c0ca7360c82a8932bcb0df222da9.patch + /usr/bin/git apply --index --reject - Checking patch pymoose/PyRun.cpp... Applied patch pymoose/PyRun.cpp cleanly. + GIT_COMMITTER_DATE=@1721260800 + GIT_AUTHOR_DATE=@1721260800 + /usr/bin/git commit -q -m c570f7c057f9c0ca7360c82a8932bcb0df222da9.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/665c532745987fb1c7a8fc2a9a57bffa330480b4.patch + /usr/bin/git apply --index --reject - Checking patch pymoose/PyRun.cpp... Applied patch pymoose/PyRun.cpp cleanly. + GIT_COMMITTER_DATE=@1721260800 + GIT_AUTHOR_DATE=@1721260800 + /usr/bin/git commit -q -m 665c532745987fb1c7a8fc2a9a57bffa330480b4.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-Use-.so-suffix-for-all-arches.patch + /usr/bin/git apply --index --reject - Checking patch python/setup.cmake.py... Applied patch python/setup.cmake.py cleanly. + GIT_COMMITTER_DATE=@1721260800 + GIT_AUTHOR_DATE=@1721260800 + /usr/bin/git commit -q -m 0001-Use-.so-suffix-for-all-arches.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/moose-python3.10.patch + /usr/bin/git apply --index --reject - Checking patch python/moose/utils.py... Hunk #2 succeeded at 203 (offset -1 lines). Applied patch python/moose/utils.py cleanly. + GIT_COMMITTER_DATE=@1721260800 + GIT_AUTHOR_DATE=@1721260800 + /usr/bin/git commit -q -m moose-python3.10.patch --author 'rpm-build ' + sed -i s/-O3// CMakeLists.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Pe4DLN + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd moose-core-3.1.5 + cmake_opts=(-DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_C_FLAGS="-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer" -DCMAKE_CXX_FLAGS="-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer" -DCMAKE_EXE_LINKER_FLAGS="$LDFLAGS -Wl,--build-id" -DCMAKE_MODULE_LINKER_FLAGS="$LDFLAGS -Wl,--build-id" -DVERSION_MOOSE=3.1.5 -DCMAKE_BUILD_TYPE="Release|RelWithDebugInfo" -DCMAKE_INSTALL_DO_STRIP=0 -DPYTHON_EXECUTABLE=/usr/bin/python3) + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=ON '-DCMAKE_C_FLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' '-DCMAKE_CXX_FLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id' '-DCMAKE_MODULE_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id' -DVERSION_MOOSE=3.1.5 '-DCMAKE_BUILD_TYPE=Release|RelWithDebugInfo' -DCMAKE_INSTALL_DO_STRIP=0 -DPYTHON_EXECUTABLE=/usr/bin/python3 CMake Deprecation Warning at CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 14.2.1 -- The CXX compiler identification is GNU 14.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success -- Performing Test COMPILER_SUPPORTS_CXX0X -- Performing Test COMPILER_SUPPORTS_CXX0X - Success -- Performing Test COMPILER_WARNS_STRICT_ALIASING -- Performing Test COMPILER_WARNS_STRICT_ALIASING - Success -- Performing Test COMPILER_SUPPORT_UNUSED_BUT_SET_VARIABLE_NO_WARN -- Performing Test COMPILER_SUPPORT_UNUSED_BUT_SET_VARIABLE_NO_WARN - Success -- Your compiler supports c++11 features. Enabling it -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- MOOSE Version 3.1.5 -- | Writing 3.1.5 to /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/python/VERSION -- Operating system: Linux -- Building for Release/No unit tests. -- GSL version : 2.7 -- Found GSL /usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so -- Found HDF5: /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so (found version "1.12.1") found components: CXX HL -- MOOSE will use following HDF5 /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so;/usr/lib64/libhdf5_hl_cpp.so;/usr/lib64/libhdf5_hl.so -- Using gsl libraries: /usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so CMake Deprecation Warning at external/muparser/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at basecode/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at signeur/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at ksolve/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at hsolve/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at diffusion/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at synapse/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at intfire/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Shared libs: /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so;/usr/lib64/libhdf5_hl_cpp.so;/usr/lib64/libhdf5_hl.so;/usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so CMake Warning (dev) at CMakeLists.txt:381 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13", minimum required is "3.4") -- Python include paths: -I/usr/include/python3.13 -I/usr/include/python3.13 -- NumPy include path: /usr/lib64/python3.13/site-packages/numpy/core/include -- Platform: Linux-6.5.6-300.fc39.aarch64-aarch64-with-glibc2.40.9000 CMake Warning (dev) at CMakeLists.txt:411 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found version "3.13") -- binary distribution file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist/pymoose-3.1.5.CMAKE.tar.gz ======================================= If cmake did not report any error, run 'make' to build MOOSE ======================================= -- Configuring done (2.3s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -B/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f intfire/CMakeFiles/intfire.dir/build.make intfire/CMakeFiles/intfire.dir/depend /usr/bin/gmake -f external/muparser/CMakeFiles/muparser.dir/build.make external/muparser/CMakeFiles/muparser.dir/depend /usr/bin/gmake -f basecode/CMakeFiles/basecode.dir/build.make basecode/CMakeFiles/basecode.dir/depend /usr/bin/gmake -f msg/CMakeFiles/msg.dir/build.make msg/CMakeFiles/msg.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser/CMakeFiles/muparser.dir/DependInfo.cmake "--color=" cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire/CMakeFiles/intfire.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode/CMakeFiles/basecode.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg/CMakeFiles/msg.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f intfire/CMakeFiles/intfire.dir/build.make intfire/CMakeFiles/intfire.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f external/muparser/CMakeFiles/muparser.dir/build.make external/muparser/CMakeFiles/muparser.dir/build /usr/bin/gmake -f basecode/CMakeFiles/basecode.dir/build.make basecode/CMakeFiles/basecode.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f msg/CMakeFiles/msg.dir/build.make msg/CMakeFiles/msg.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 1%] Building CXX object intfire/CMakeFiles/intfire.dir/AdExIF.cpp.o [ 1%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParser.cpp.o [ 1%] Building CXX object basecode/CMakeFiles/basecode.dir/consts.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/consts.cpp.o -MF CMakeFiles/basecode.dir/consts.cpp.o.d -o CMakeFiles/basecode.dir/consts.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/consts.cpp cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParser.cpp.o -MF CMakeFiles/muparser.dir/src/muParser.cpp.o.d -o CMakeFiles/muparser.dir/src/muParser.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParser.cpp cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/AdExIF.cpp.o -MF CMakeFiles/intfire.dir/AdExIF.cpp.o.d -o CMakeFiles/intfire.dir/AdExIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/AdExIF.cpp [ 1%] Building CXX object msg/CMakeFiles/msg.dir/Msg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/Msg.cpp.o -MF CMakeFiles/msg.dir/Msg.cpp.o.d -o CMakeFiles/msg.dir/Msg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/Msg.cpp [ 1%] Building CXX object basecode/CMakeFiles/basecode.dir/Element.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Element.cpp.o -MF CMakeFiles/basecode.dir/Element.cpp.o.d -o CMakeFiles/basecode.dir/Element.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Element.cpp [ 1%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserBase.cpp.o -MF CMakeFiles/muparser.dir/src/muParserBase.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserBase.cpp [ 2%] Building CXX object intfire/CMakeFiles/intfire.dir/AdThreshIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/AdThreshIF.cpp.o -MF CMakeFiles/intfire.dir/AdThreshIF.cpp.o.d -o CMakeFiles/intfire.dir/AdThreshIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/AdThreshIF.cpp [ 3%] Building CXX object msg/CMakeFiles/msg.dir/DiagonalMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/DiagonalMsg.cpp.o -MF CMakeFiles/msg.dir/DiagonalMsg.cpp.o.d -o CMakeFiles/msg.dir/DiagonalMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/DiagonalMsg.cpp [ 4%] Building CXX object basecode/CMakeFiles/basecode.dir/DataElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/DataElement.cpp.o -MF CMakeFiles/basecode.dir/DataElement.cpp.o.d -o CMakeFiles/basecode.dir/DataElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/DataElement.cpp [ 4%] Building CXX object intfire/CMakeFiles/intfire.dir/ExIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/ExIF.cpp.o -MF CMakeFiles/intfire.dir/ExIF.cpp.o.d -o CMakeFiles/intfire.dir/ExIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/ExIF.cpp [ 4%] Building CXX object basecode/CMakeFiles/basecode.dir/GlobalDataElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/GlobalDataElement.cpp.o -MF CMakeFiles/basecode.dir/GlobalDataElement.cpp.o.d -o CMakeFiles/basecode.dir/GlobalDataElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/GlobalDataElement.cpp [ 5%] Building CXX object basecode/CMakeFiles/basecode.dir/LocalDataElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/LocalDataElement.cpp.o -MF CMakeFiles/basecode.dir/LocalDataElement.cpp.o.d -o CMakeFiles/basecode.dir/LocalDataElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/LocalDataElement.cpp [ 5%] Building CXX object msg/CMakeFiles/msg.dir/OneToAllMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/OneToAllMsg.cpp.o -MF CMakeFiles/msg.dir/OneToAllMsg.cpp.o.d -o CMakeFiles/msg.dir/OneToAllMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/OneToAllMsg.cpp [ 6%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o -MF CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserBytecode.cpp [ 6%] Building CXX object basecode/CMakeFiles/basecode.dir/Eref.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Eref.cpp.o -MF CMakeFiles/basecode.dir/Eref.cpp.o.d -o CMakeFiles/basecode.dir/Eref.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Eref.cpp [ 7%] Building CXX object intfire/CMakeFiles/intfire.dir/IntFireBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/IntFireBase.cpp.o -MF CMakeFiles/intfire.dir/IntFireBase.cpp.o.d -o CMakeFiles/intfire.dir/IntFireBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/IntFireBase.cpp [ 7%] Building CXX object basecode/CMakeFiles/basecode.dir/Finfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Finfo.cpp.o -MF CMakeFiles/basecode.dir/Finfo.cpp.o.d -o CMakeFiles/basecode.dir/Finfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Finfo.cpp [ 7%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserCallback.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserCallback.cpp.o -MF CMakeFiles/muparser.dir/src/muParserCallback.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserCallback.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserCallback.cpp [ 7%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserDLL.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserDLL.cpp.o -MF CMakeFiles/muparser.dir/src/muParserDLL.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserDLL.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserDLL.cpp [ 8%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserError.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserError.cpp.o -MF CMakeFiles/muparser.dir/src/muParserError.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserError.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserError.cpp [ 9%] Building CXX object msg/CMakeFiles/msg.dir/OneToOneMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/OneToOneMsg.cpp.o -MF CMakeFiles/msg.dir/OneToOneMsg.cpp.o.d -o CMakeFiles/msg.dir/OneToOneMsg.cpp.o -c 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserInt.cpp.o -MF CMakeFiles/muparser.dir/src/muParserInt.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserInt.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserInt.cpp [ 9%] Building CXX object msg/CMakeFiles/msg.dir/SingleMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SingleMsg.cpp [ 9%] Building CXX object intfire/CMakeFiles/intfire.dir/IzhIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/IzhIF.cpp.o -MF CMakeFiles/intfire.dir/IzhIF.cpp.o.d -o CMakeFiles/intfire.dir/IzhIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/IzhIF.cpp [ 10%] Building CXX object basecode/CMakeFiles/basecode.dir/DestFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/DestFinfo.cpp.o -MF CMakeFiles/basecode.dir/DestFinfo.cpp.o.d -o CMakeFiles/basecode.dir/DestFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/DestFinfo.cpp [ 11%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserTest.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserTest.cpp.o -MF CMakeFiles/muparser.dir/src/muParserTest.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserTest.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserTest.cpp [ 11%] Building CXX object basecode/CMakeFiles/basecode.dir/Cinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Cinfo.cpp.o -MF CMakeFiles/basecode.dir/Cinfo.cpp.o.d -o CMakeFiles/basecode.dir/Cinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Cinfo.cpp [ 11%] Building CXX object msg/CMakeFiles/msg.dir/SparseMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/SparseMsg.cpp.o -MF CMakeFiles/msg.dir/SparseMsg.cpp.o.d -o CMakeFiles/msg.dir/SparseMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp [ 11%] Building CXX object intfire/CMakeFiles/intfire.dir/LIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/LIF.cpp.o -MF CMakeFiles/intfire.dir/LIF.cpp.o.d -o CMakeFiles/intfire.dir/LIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/LIF.cpp [ 12%] Building CXX object intfire/CMakeFiles/intfire.dir/QIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/QIF.cpp.o -MF CMakeFiles/intfire.dir/QIF.cpp.o.d -o CMakeFiles/intfire.dir/QIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/QIF.cpp [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/SrcFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/SrcFinfo.cpp.o -MF CMakeFiles/basecode.dir/SrcFinfo.cpp.o.d -o CMakeFiles/basecode.dir/SrcFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/SrcFinfo.cpp [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/ValueFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/ValueFinfo.cpp.o -MF CMakeFiles/basecode.dir/ValueFinfo.cpp.o.d -o CMakeFiles/basecode.dir/ValueFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/ValueFinfo.cpp [ 13%] Building CXX object intfire/CMakeFiles/intfire.dir/testIntFire.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/testIntFire.cpp.o -MF CMakeFiles/intfire.dir/testIntFire.cpp.o.d -o CMakeFiles/intfire.dir/testIntFire.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/testIntFire.cpp [ 13%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o -MF CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserTokenReader.cpp [ 13%] Linking CXX static library libintfire.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/cmake -P CMakeFiles/intfire.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/cmake -E cmake_link_script CMakeFiles/intfire.dir/link.txt --verbose=1 /usr/bin/ar qc libintfire.a CMakeFiles/intfire.dir/AdExIF.cpp.o CMakeFiles/intfire.dir/AdThreshIF.cpp.o CMakeFiles/intfire.dir/ExIF.cpp.o CMakeFiles/intfire.dir/IntFireBase.cpp.o CMakeFiles/intfire.dir/IzhIF.cpp.o CMakeFiles/intfire.dir/LIF.cpp.o CMakeFiles/intfire.dir/QIF.cpp.o CMakeFiles/intfire.dir/testIntFire.cpp.o /usr/bin/ranlib libintfire.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/SharedFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/SharedFinfo.cpp.o -MF CMakeFiles/basecode.dir/SharedFinfo.cpp.o.d -o CMakeFiles/basecode.dir/SharedFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/SharedFinfo.cpp [ 13%] Built target intfire /usr/bin/gmake -f shell/CMakeFiles/shell.dir/build.make shell/CMakeFiles/shell.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell/CMakeFiles/shell.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f shell/CMakeFiles/shell.dir/build.make shell/CMakeFiles/shell.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 13%] Building CXX object shell/CMakeFiles/shell.dir/Shell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/Shell.cpp.o -MF CMakeFiles/shell.dir/Shell.cpp.o.d -o CMakeFiles/shell.dir/Shell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/Shell.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp: In function ‘fillErefsFromMatrix(SparseMatrix const&, std::vector >, std::allocator > > >&, Element*, Element*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:444:67: warning: ‘entry’ may be used uninitialized [-Wmaybe-uninitialized] 444 | v[i][j] = Eref( e2, colIndex[j], entry[j] ); | ^ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:439:37: note: ‘entry’ was declared here 439 | const unsigned int* entry; | ^~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:444:67: warning: ‘colIndex’ may be used uninitialized [-Wmaybe-uninitialized] 444 | v[i][j] = Eref( e2, colIndex[j], entry[j] ); | ^ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:440:37: note: ‘colIndex’ was declared here 440 | const unsigned int* colIndex; | ^~~~~~~~ [ 14%] Building CXX object basecode/CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o -MF CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o.d -o CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/FieldElementFinfo.cpp [ 14%] Building CXX object basecode/CMakeFiles/basecode.dir/FieldElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/FieldElement.cpp.o -MF CMakeFiles/basecode.dir/FieldElement.cpp.o.d -o CMakeFiles/basecode.dir/FieldElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/FieldElement.cpp [ 14%] Linking CXX static library libmuparser.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/cmake -P CMakeFiles/muparser.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/cmake -E cmake_link_script CMakeFiles/muparser.dir/link.txt --verbose=1 /usr/bin/ar qc libmuparser.a CMakeFiles/muparser.dir/src/muParser.cpp.o CMakeFiles/muparser.dir/src/muParserBase.cpp.o CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o CMakeFiles/muparser.dir/src/muParserCallback.cpp.o CMakeFiles/muparser.dir/src/muParserDLL.cpp.o CMakeFiles/muparser.dir/src/muParserError.cpp.o CMakeFiles/muparser.dir/src/muParserInt.cpp.o CMakeFiles/muparser.dir/src/muParserTest.cpp.o CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o /usr/bin/ranlib libmuparser.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 14%] Built target muparser [ 15%] Building CXX object shell/CMakeFiles/shell.dir/ShellCopy.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/ShellCopy.cpp.o -MF CMakeFiles/shell.dir/ShellCopy.cpp.o.d -o CMakeFiles/shell.dir/ShellCopy.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/ShellCopy.cpp [ 15%] Building CXX object basecode/CMakeFiles/basecode.dir/Id.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Id.cpp.o -MF CMakeFiles/basecode.dir/Id.cpp.o.d -o CMakeFiles/basecode.dir/Id.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Id.cpp [ 16%] Building CXX object msg/CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o -MF CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o.d -o CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/OneToOneDataIndexMsg.cpp [ 17%] Building CXX object basecode/CMakeFiles/basecode.dir/ObjId.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/ObjId.cpp.o -MF CMakeFiles/basecode.dir/ObjId.cpp.o.d -o CMakeFiles/basecode.dir/ObjId.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/ObjId.cpp [ 17%] Building CXX object shell/CMakeFiles/shell.dir/ShellThreads.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/ShellThreads.cpp.o -MF CMakeFiles/shell.dir/ShellThreads.cpp.o.d -o CMakeFiles/shell.dir/ShellThreads.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/ShellThreads.cpp [ 17%] Building CXX object basecode/CMakeFiles/basecode.dir/global.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/global.cpp.o -MF CMakeFiles/basecode.dir/global.cpp.o.d -o CMakeFiles/basecode.dir/global.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/global.cpp [ 17%] Building CXX object msg/CMakeFiles/msg.dir/testMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/testMsg.cpp.o -MF CMakeFiles/msg.dir/testMsg.cpp.o.d -o CMakeFiles/msg.dir/testMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/testMsg.cpp [ 17%] Building CXX object shell/CMakeFiles/shell.dir/LoadModels.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/LoadModels.cpp.o -MF CMakeFiles/shell.dir/LoadModels.cpp.o.d -o CMakeFiles/shell.dir/LoadModels.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/LoadModels.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/global.cpp: In function ‘bool moose::createParentDirs(const std::string&)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/global.cpp:155:15: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 155 | system( command.c_str() ); | ~~~~~~^~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object basecode/CMakeFiles/basecode.dir/SetGet.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/SetGet.cpp.o -MF CMakeFiles/basecode.dir/SetGet.cpp.o.d -o CMakeFiles/basecode.dir/SetGet.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/SetGet.cpp [ 18%] Building CXX object basecode/CMakeFiles/basecode.dir/OpFuncBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/OpFuncBase.cpp.o -MF CMakeFiles/basecode.dir/OpFuncBase.cpp.o.d -o CMakeFiles/basecode.dir/OpFuncBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/OpFuncBase.cpp [ 19%] Building CXX object shell/CMakeFiles/shell.dir/SaveModels.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/SaveModels.cpp.o -MF CMakeFiles/shell.dir/SaveModels.cpp.o.d -o CMakeFiles/shell.dir/SaveModels.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/SaveModels.cpp [ 19%] Building CXX object shell/CMakeFiles/shell.dir/Neutral.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/Neutral.cpp.o -MF CMakeFiles/shell.dir/Neutral.cpp.o.d -o CMakeFiles/shell.dir/Neutral.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/Neutral.cpp [ 19%] Building CXX object basecode/CMakeFiles/basecode.dir/EpFunc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/EpFunc.cpp.o -MF CMakeFiles/basecode.dir/EpFunc.cpp.o.d -o CMakeFiles/basecode.dir/EpFunc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/EpFunc.cpp [ 20%] Building CXX object shell/CMakeFiles/shell.dir/Wildcard.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/HopFunc.cpp.o -MF CMakeFiles/basecode.dir/HopFunc.cpp.o.d -o CMakeFiles/basecode.dir/HopFunc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/HopFunc.cpp [ 21%] Linking CXX static library libmsg.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/cmake -P CMakeFiles/msg.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/cmake -E cmake_link_script CMakeFiles/msg.dir/link.txt --verbose=1 /usr/bin/ar qc libmsg.a CMakeFiles/msg.dir/Msg.cpp.o CMakeFiles/msg.dir/DiagonalMsg.cpp.o CMakeFiles/msg.dir/OneToAllMsg.cpp.o CMakeFiles/msg.dir/OneToOneMsg.cpp.o CMakeFiles/msg.dir/SingleMsg.cpp.o CMakeFiles/msg.dir/SparseMsg.cpp.o CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o CMakeFiles/msg.dir/testMsg.cpp.o /usr/bin/ranlib libmsg.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 21%] Built target msg /usr/bin/gmake -f randnum/CMakeFiles/randnum.dir/build.make randnum/CMakeFiles/randnum.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum/CMakeFiles/randnum.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f randnum/CMakeFiles/randnum.dir/build.make randnum/CMakeFiles/randnum.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 22%] Building CXX object randnum/CMakeFiles/randnum.dir/Binomial.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC 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CMakeFiles/basecode.dir/doubleEq.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/doubleEq.cpp [ 23%] Building CXX object basecode/CMakeFiles/basecode.dir/testAsync.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/testAsync.cpp.o -MF CMakeFiles/basecode.dir/testAsync.cpp.o.d -o CMakeFiles/basecode.dir/testAsync.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/testAsync.cpp [ 23%] Building CXX object randnum/CMakeFiles/randnum.dir/BinomialRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/BinomialRng.cpp.o -MF CMakeFiles/randnum.dir/BinomialRng.cpp.o.d -o CMakeFiles/randnum.dir/BinomialRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/BinomialRng.cpp [ 23%] Building CXX object shell/CMakeFiles/shell.dir/testShell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/ExponentialRng.cpp.o -MF CMakeFiles/randnum.dir/ExponentialRng.cpp.o.d -o CMakeFiles/randnum.dir/ExponentialRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/ExponentialRng.cpp [ 24%] Building CXX object randnum/CMakeFiles/randnum.dir/Gamma.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Gamma.cpp.o -MF CMakeFiles/randnum.dir/Gamma.cpp.o.d -o CMakeFiles/randnum.dir/Gamma.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Gamma.cpp [ 25%] Building CXX object randnum/CMakeFiles/randnum.dir/GammaRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/GammaRng.cpp.o -MF CMakeFiles/randnum.dir/GammaRng.cpp.o.d -o CMakeFiles/randnum.dir/GammaRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/GammaRng.cpp [ 25%] Building CXX object randnum/CMakeFiles/randnum.dir/Normal.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC 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randnum/CMakeFiles/randnum.dir/NormalRng.cpp.o -MF CMakeFiles/randnum.dir/NormalRng.cpp.o.d -o CMakeFiles/randnum.dir/NormalRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/NormalRng.cpp [ 26%] Building CXX object randnum/CMakeFiles/randnum.dir/Poisson.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Poisson.cpp.o -MF CMakeFiles/randnum.dir/Poisson.cpp.o.d -o CMakeFiles/randnum.dir/Poisson.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Poisson.cpp [ 26%] Linking CXX static library libshell.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/cmake -P CMakeFiles/shell.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/cmake -E cmake_link_script CMakeFiles/shell.dir/link.txt --verbose=1 /usr/bin/ar qc libshell.a CMakeFiles/shell.dir/Shell.cpp.o CMakeFiles/shell.dir/ShellCopy.cpp.o CMakeFiles/shell.dir/ShellThreads.cpp.o CMakeFiles/shell.dir/LoadModels.cpp.o CMakeFiles/shell.dir/SaveModels.cpp.o CMakeFiles/shell.dir/Neutral.cpp.o CMakeFiles/shell.dir/Wildcard.cpp.o CMakeFiles/shell.dir/testShell.cpp.o [ 26%] Building CXX object randnum/CMakeFiles/randnum.dir/PoissonRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security 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scheduling/CMakeFiles/scheduling.dir/Clock.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection 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biophysics/CMakeFiles/biophysics.dir/build.make biophysics/CMakeFiles/biophysics.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics/CMakeFiles/biophysics.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f biophysics/CMakeFiles/biophysics.dir/build.make biophysics/CMakeFiles/biophysics.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 26%] Building CXX object biophysics/CMakeFiles/biophysics.dir/IntFire.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/IntFire.cpp.o -MF CMakeFiles/biophysics.dir/IntFire.cpp.o.d -o CMakeFiles/biophysics.dir/IntFire.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/IntFire.cpp [ 27%] Building CXX object randnum/CMakeFiles/randnum.dir/Probability.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ 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randnum/CMakeFiles/randnum.dir/Probability.cpp.o -MF CMakeFiles/randnum.dir/Probability.cpp.o.d -o CMakeFiles/randnum.dir/Probability.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Probability.cpp [ 27%] Building CXX object randnum/CMakeFiles/randnum.dir/RandGenerator.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/RandGenerator.cpp.o -MF CMakeFiles/randnum.dir/RandGenerator.cpp.o.d -o CMakeFiles/randnum.dir/RandGenerator.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/RandGenerator.cpp [ 27%] Building CXX object randnum/CMakeFiles/randnum.dir/Uniform.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 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/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Uniform.cpp [ 28%] Building CXX object randnum/CMakeFiles/randnum.dir/UniformRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/UniformRng.cpp.o -MF CMakeFiles/randnum.dir/UniformRng.cpp.o.d -o CMakeFiles/randnum.dir/UniformRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/UniformRng.cpp [ 29%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SpikeGen.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SpikeGen.cpp.o -MF CMakeFiles/biophysics.dir/SpikeGen.cpp.o.d -o CMakeFiles/biophysics.dir/SpikeGen.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/SpikeGen.cpp [ 29%] Building CXX object randnum/CMakeFiles/randnum.dir/mt19937ar.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/mt19937ar.cpp.o -MF CMakeFiles/randnum.dir/mt19937ar.cpp.o.d -o CMakeFiles/randnum.dir/mt19937ar.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/mt19937ar.cpp In file included from /usr/include/sys/time.h:21, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/mt19937ar.cpp:49: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ [ 29%] Building CXX object biophysics/CMakeFiles/biophysics.dir/RandSpike.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/RandSpike.cpp.o -MF CMakeFiles/biophysics.dir/RandSpike.cpp.o.d -o CMakeFiles/biophysics.dir/RandSpike.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/RandSpike.cpp [ 30%] Linking CXX static library librandnum.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/cmake -P CMakeFiles/randnum.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/cmake -E cmake_link_script CMakeFiles/randnum.dir/link.txt --verbose=1 /usr/bin/ar qc librandnum.a CMakeFiles/randnum.dir/Binomial.cpp.o CMakeFiles/randnum.dir/BinomialRng.cpp.o CMakeFiles/randnum.dir/Exponential.cpp.o CMakeFiles/randnum.dir/ExponentialRng.cpp.o CMakeFiles/randnum.dir/Gamma.cpp.o CMakeFiles/randnum.dir/GammaRng.cpp.o CMakeFiles/randnum.dir/Normal.cpp.o CMakeFiles/randnum.dir/NormalRng.cpp.o CMakeFiles/randnum.dir/Poisson.cpp.o CMakeFiles/randnum.dir/PoissonRng.cpp.o CMakeFiles/randnum.dir/Probability.cpp.o CMakeFiles/randnum.dir/RandGenerator.cpp.o CMakeFiles/randnum.dir/Uniform.cpp.o CMakeFiles/randnum.dir/UniformRng.cpp.o CMakeFiles/randnum.dir/mt19937ar.cpp.o /usr/bin/ranlib librandnum.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 30%] Built target randnum /usr/bin/gmake -f builtins/CMakeFiles/moose_builtins.dir/build.make builtins/CMakeFiles/moose_builtins.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins/CMakeFiles/moose_builtins.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f builtins/CMakeFiles/moose_builtins.dir/build.make builtins/CMakeFiles/moose_builtins.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 30%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Arith.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Arith.cpp.o -MF CMakeFiles/moose_builtins.dir/Arith.cpp.o.d -o CMakeFiles/moose_builtins.dir/Arith.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Arith.cpp [ 31%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o -MF CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o.d -o CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CompartmentDataHolder.cpp [ 31%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CompartmentBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CompartmentBase.cpp.o -MF CMakeFiles/biophysics.dir/CompartmentBase.cpp.o.d -o CMakeFiles/biophysics.dir/CompartmentBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CompartmentBase.cpp [ 31%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Compartment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Compartment.cpp.o -MF CMakeFiles/biophysics.dir/Compartment.cpp.o.d -o CMakeFiles/biophysics.dir/Compartment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Compartment.cpp [ 31%] Building CXX object scheduling/CMakeFiles/scheduling.dir/testScheduling.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT scheduling/CMakeFiles/scheduling.dir/testScheduling.cpp.o -MF CMakeFiles/scheduling.dir/testScheduling.cpp.o.d -o CMakeFiles/scheduling.dir/testScheduling.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/testScheduling.cpp [ 32%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Group.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Group.cpp.o -MF CMakeFiles/moose_builtins.dir/Group.cpp.o.d -o CMakeFiles/moose_builtins.dir/Group.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Group.cpp [ 33%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SymCompartment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SymCompartment.cpp.o -MF CMakeFiles/biophysics.dir/SymCompartment.cpp.o.d -o CMakeFiles/biophysics.dir/SymCompartment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/SymCompartment.cpp [ 33%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Mstring.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Mstring.cpp.o -MF CMakeFiles/moose_builtins.dir/Mstring.cpp.o.d -o CMakeFiles/moose_builtins.dir/Mstring.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Mstring.cpp [ 34%] Linking CXX static library libscheduling.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/cmake -P CMakeFiles/scheduling.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/cmake -E cmake_link_script CMakeFiles/scheduling.dir/link.txt --verbose=1 /usr/bin/ar qc libscheduling.a CMakeFiles/scheduling.dir/Clock.cpp.o CMakeFiles/scheduling.dir/testScheduling.cpp.o /usr/bin/ranlib libscheduling.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 34%] Built target scheduling /usr/bin/gmake -f utility/CMakeFiles/utility.dir/build.make utility/CMakeFiles/utility.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility/CMakeFiles/utility.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f utility/CMakeFiles/utility.dir/build.make utility/CMakeFiles/utility.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 35%] Building CXX object utility/CMakeFiles/utility.dir/strutil.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/strutil.cpp.o -MF CMakeFiles/utility.dir/strutil.cpp.o.d -o CMakeFiles/utility.dir/strutil.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/strutil.cpp [ 35%] Building CXX object biophysics/CMakeFiles/biophysics.dir/GapJunction.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/GapJunction.cpp.o -MF CMakeFiles/biophysics.dir/GapJunction.cpp.o.d -o CMakeFiles/biophysics.dir/GapJunction.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/GapJunction.cpp [ 35%] Building CXX object utility/CMakeFiles/utility.dir/types.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/types.cpp.o -MF CMakeFiles/utility.dir/types.cpp.o.d -o CMakeFiles/utility.dir/types.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/types.cpp [ 35%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ChanBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ChanBase.cpp.o -MF CMakeFiles/biophysics.dir/ChanBase.cpp.o.d -o CMakeFiles/biophysics.dir/ChanBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ChanBase.cpp [ 36%] Building CXX object utility/CMakeFiles/utility.dir/setupenv.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/setupenv.cpp.o -MF CMakeFiles/utility.dir/setupenv.cpp.o.d -o CMakeFiles/utility.dir/setupenv.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/setupenv.cpp [ 36%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Func.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Func.cpp.o -MF CMakeFiles/moose_builtins.dir/Func.cpp.o.d -o CMakeFiles/moose_builtins.dir/Func.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Func.cpp [ 36%] Building CXX object utility/CMakeFiles/utility.dir/numutil.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/numutil.cpp.o -MF CMakeFiles/utility.dir/numutil.cpp.o.d -o CMakeFiles/utility.dir/numutil.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/numutil.cpp [ 36%] Building CXX object utility/CMakeFiles/utility.dir/Annotator.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/Annotator.cpp.o -MF CMakeFiles/utility.dir/Annotator.cpp.o.d -o CMakeFiles/utility.dir/Annotator.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/Annotator.cpp [ 37%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ChanCommon.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ChanCommon.cpp.o -MF CMakeFiles/biophysics.dir/ChanCommon.cpp.o.d -o CMakeFiles/biophysics.dir/ChanCommon.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ChanCommon.cpp [ 37%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannel.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHChannel.cpp.o -MF CMakeFiles/biophysics.dir/HHChannel.cpp.o.d -o CMakeFiles/biophysics.dir/HHChannel.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHChannel.cpp [ 38%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannelBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHChannelBase.cpp.o -MF CMakeFiles/biophysics.dir/HHChannelBase.cpp.o.d -o CMakeFiles/biophysics.dir/HHChannelBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHChannelBase.cpp [ 38%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannel2D.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHChannel2D.cpp.o -MF CMakeFiles/biophysics.dir/HHChannel2D.cpp.o.d -o CMakeFiles/biophysics.dir/HHChannel2D.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHChannel2D.cpp [ 39%] Building CXX object utility/CMakeFiles/utility.dir/Vec.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/Vec.cpp.o -MF CMakeFiles/utility.dir/Vec.cpp.o.d -o CMakeFiles/utility.dir/Vec.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/Vec.cpp [ 39%] Building CXX object utility/CMakeFiles/utility.dir/cnpy.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/cnpy.cpp.o -MF CMakeFiles/utility.dir/cnpy.cpp.o.d -o CMakeFiles/utility.dir/cnpy.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/cnpy.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/cnpy.cpp: In function ‘bool cnpy2::is_valid_numpy_file(FILE*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/cnpy.cpp:88:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 88 | fread( buffer, sizeof(char), __pre__size__, fp ); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 40%] Linking CXX static library libutility.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/cmake -P CMakeFiles/utility.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility.dir/link.txt --verbose=1 /usr/bin/ar qc libutility.a CMakeFiles/utility.dir/strutil.cpp.o CMakeFiles/utility.dir/types.cpp.o CMakeFiles/utility.dir/setupenv.cpp.o CMakeFiles/utility.dir/numutil.cpp.o CMakeFiles/utility.dir/Annotator.cpp.o CMakeFiles/utility.dir/Vec.cpp.o CMakeFiles/utility.dir/cnpy.cpp.o /usr/bin/ranlib libutility.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 40%] Built target utility /usr/bin/gmake -f mesh/CMakeFiles/mesh.dir/build.make mesh/CMakeFiles/mesh.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh/CMakeFiles/mesh.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f mesh/CMakeFiles/mesh.dir/build.make mesh/CMakeFiles/mesh.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 40%] Building CXX object mesh/CMakeFiles/mesh.dir/ChemCompt.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/ChemCompt.cpp.o -MF CMakeFiles/mesh.dir/ChemCompt.cpp.o.d -o CMakeFiles/mesh.dir/ChemCompt.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/ChemCompt.cpp [ 40%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHGate.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHGate.cpp.o -MF CMakeFiles/biophysics.dir/HHGate.cpp.o.d -o CMakeFiles/biophysics.dir/HHGate.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHGate.cpp [ 41%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Function.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Function.cpp.o -MF CMakeFiles/moose_builtins.dir/Function.cpp.o.d -o CMakeFiles/moose_builtins.dir/Function.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Function.cpp [ 42%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHGate2D.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHGate2D.cpp.o -MF CMakeFiles/biophysics.dir/HHGate2D.cpp.o.d -o CMakeFiles/biophysics.dir/HHGate2D.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHGate2D.cpp [ 43%] Building CXX object mesh/CMakeFiles/mesh.dir/MeshCompt.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/MeshCompt.cpp.o -MF CMakeFiles/mesh.dir/MeshCompt.cpp.o.d -o CMakeFiles/mesh.dir/MeshCompt.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/MeshCompt.cpp [ 43%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CaConcBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CaConcBase.cpp.o -MF CMakeFiles/biophysics.dir/CaConcBase.cpp.o.d -o CMakeFiles/biophysics.dir/CaConcBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CaConcBase.cpp [ 43%] Building CXX object mesh/CMakeFiles/mesh.dir/MeshEntry.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/MeshEntry.cpp.o -MF CMakeFiles/mesh.dir/MeshEntry.cpp.o.d -o CMakeFiles/mesh.dir/MeshEntry.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/MeshEntry.cpp [ 44%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CaConc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CaConc.cpp.o -MF CMakeFiles/biophysics.dir/CaConc.cpp.o.d -o CMakeFiles/biophysics.dir/CaConc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CaConc.cpp [ 44%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MgBlock.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MgBlock.cpp.o -MF CMakeFiles/biophysics.dir/MgBlock.cpp.o.d -o CMakeFiles/biophysics.dir/MgBlock.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MgBlock.cpp [ 44%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Variable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Variable.cpp.o -MF CMakeFiles/moose_builtins.dir/Variable.cpp.o.d -o CMakeFiles/moose_builtins.dir/Variable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Variable.cpp [ 44%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Nernst.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Nernst.cpp.o -MF CMakeFiles/biophysics.dir/Nernst.cpp.o.d -o CMakeFiles/biophysics.dir/Nernst.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Nernst.cpp [ 45%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Neuron.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Neuron.cpp.o -MF CMakeFiles/biophysics.dir/Neuron.cpp.o.d -o CMakeFiles/biophysics.dir/Neuron.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Neuron.cpp [ 45%] Building CXX object mesh/CMakeFiles/mesh.dir/CubeMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/CubeMesh.cpp.o -MF CMakeFiles/mesh.dir/CubeMesh.cpp.o.d -o CMakeFiles/mesh.dir/CubeMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/CubeMesh.cpp [ 46%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/InputVariable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/InputVariable.cpp.o -MF CMakeFiles/moose_builtins.dir/InputVariable.cpp.o.d -o CMakeFiles/moose_builtins.dir/InputVariable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/InputVariable.cpp [ 46%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/TableBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/TableBase.cpp.o -MF CMakeFiles/moose_builtins.dir/TableBase.cpp.o.d -o CMakeFiles/moose_builtins.dir/TableBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/TableBase.cpp [ 46%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ReadCell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ReadCell.cpp.o -MF CMakeFiles/biophysics.dir/ReadCell.cpp.o.d -o CMakeFiles/biophysics.dir/ReadCell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ReadCell.cpp [ 47%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SwcSegment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SwcSegment.cpp.o -MF CMakeFiles/biophysics.dir/SwcSegment.cpp.o.d -o CMakeFiles/biophysics.dir/SwcSegment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/SwcSegment.cpp [ 47%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ReadSwc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ReadSwc.cpp.o -MF CMakeFiles/biophysics.dir/ReadSwc.cpp.o.d -o CMakeFiles/biophysics.dir/ReadSwc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ReadSwc.cpp [ 47%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Table.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Table.cpp.o -MF CMakeFiles/moose_builtins.dir/Table.cpp.o.d -o CMakeFiles/moose_builtins.dir/Table.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Table.cpp [ 47%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SynChan.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SynChan.cpp.o -MF CMakeFiles/biophysics.dir/SynChan.cpp.o.d -o CMakeFiles/biophysics.dir/SynChan.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/SynChan.cpp [ 48%] Building CXX object mesh/CMakeFiles/mesh.dir/CylBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/CylBase.cpp.o -MF CMakeFiles/mesh.dir/CylBase.cpp.o.d -o CMakeFiles/mesh.dir/CylBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/CylBase.cpp [ 48%] Building CXX object mesh/CMakeFiles/mesh.dir/CylMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/CylMesh.cpp.o -MF CMakeFiles/mesh.dir/CylMesh.cpp.o.d -o CMakeFiles/mesh.dir/CylMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/CylMesh.cpp [ 49%] Building CXX object biophysics/CMakeFiles/biophysics.dir/NMDAChan.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/NMDAChan.cpp.o -MF CMakeFiles/biophysics.dir/NMDAChan.cpp.o.d -o CMakeFiles/biophysics.dir/NMDAChan.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/NMDAChan.cpp [ 50%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Interpol.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Interpol.cpp.o -MF CMakeFiles/moose_builtins.dir/Interpol.cpp.o.d -o CMakeFiles/moose_builtins.dir/Interpol.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Interpol.cpp [ 50%] Building CXX object biophysics/CMakeFiles/biophysics.dir/testBiophysics.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/testBiophysics.cpp.o -MF CMakeFiles/biophysics.dir/testBiophysics.cpp.o.d -o CMakeFiles/biophysics.dir/testBiophysics.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/testBiophysics.cpp [ 51%] Building CXX object mesh/CMakeFiles/mesh.dir/NeuroNode.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/NeuroNode.cpp.o -MF CMakeFiles/mesh.dir/NeuroNode.cpp.o.d -o CMakeFiles/mesh.dir/NeuroNode.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/NeuroNode.cpp [ 52%] Building CXX object biophysics/CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o -MF CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o.d -o CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/IzhikevichNrn.cpp [ 52%] Building CXX object biophysics/CMakeFiles/biophysics.dir/DifShell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/DifShell.cpp.o -MF CMakeFiles/biophysics.dir/DifShell.cpp.o.d -o CMakeFiles/biophysics.dir/DifShell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/DifShell.cpp [ 52%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o -MF CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o.d -o CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/StimulusTable.cpp [ 52%] Building CXX object mesh/CMakeFiles/mesh.dir/NeuroMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/NeuroMesh.cpp.o -MF CMakeFiles/mesh.dir/NeuroMesh.cpp.o.d -o CMakeFiles/mesh.dir/NeuroMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/NeuroMesh.cpp [ 52%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Leakage.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Leakage.cpp.o -MF CMakeFiles/biophysics.dir/Leakage.cpp.o.d -o CMakeFiles/biophysics.dir/Leakage.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Leakage.cpp [ 53%] Building CXX object biophysics/CMakeFiles/biophysics.dir/VectorTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/VectorTable.cpp.o -MF CMakeFiles/biophysics.dir/VectorTable.cpp.o.d -o CMakeFiles/biophysics.dir/VectorTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/VectorTable.cpp [ 53%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/TimeTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/TimeTable.cpp.o -MF CMakeFiles/moose_builtins.dir/TimeTable.cpp.o.d -o CMakeFiles/moose_builtins.dir/TimeTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/TimeTable.cpp [ 53%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o -MF CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovRateTable.cpp [ 53%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovChannel.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovChannel.cpp.o -MF CMakeFiles/biophysics.dir/MarkovChannel.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovChannel.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovChannel.cpp [ 54%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o -MF CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o.d -o CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/StreamerBase.cpp [ 54%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Streamer.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Streamer.cpp.o -MF CMakeFiles/moose_builtins.dir/Streamer.cpp.o.d -o CMakeFiles/moose_builtins.dir/Streamer.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Streamer.cpp [ 55%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MatrixOps.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MatrixOps.cpp.o -MF CMakeFiles/biophysics.dir/MatrixOps.cpp.o.d -o CMakeFiles/biophysics.dir/MatrixOps.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MatrixOps.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MatrixOps.cpp: In function ‘matMatAdd(std::vector >, std::allocator > > >*, std::vector >, std::allocator > > >*, double, double, unsigned int)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MatrixOps.cpp:128:17: warning: ‘C’ may be used uninitialized [-Wmaybe-uninitialized] 128 | Matrix *C; | ^ [ 55%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o -MF CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolverBase.cpp [ 56%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovSolver.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovSolver.cpp.o -MF CMakeFiles/biophysics.dir/MarkovSolver.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovSolver.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp [ 56%] Building CXX object mesh/CMakeFiles/mesh.dir/SpineEntry.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/SpineEntry.cpp.o -MF CMakeFiles/mesh.dir/SpineEntry.cpp.o.d -o CMakeFiles/mesh.dir/SpineEntry.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/SpineEntry.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp: In member function ‘MarkovSolver::computePadeApproximant(std::vector >, std::allocator > > >*, unsigned int)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:211:27: warning: ‘U’ may be used uninitialized [-Wmaybe-uninitialized] 211 | VplusU = matMatAdd( U, V, 1.0, 1.0 ); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:84:17: note: ‘U’ was declared here 84 | Matrix *U, *V, *VplusU, *VminusU, *invVminusU, *Qpower; | ^ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:211:27: warning: ‘V’ may be used uninitialized [-Wmaybe-uninitialized] 211 | VplusU = matMatAdd( U, V, 1.0, 1.0 ); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:84:21: note: ‘V’ was declared here 84 | Matrix *U, *V, *VplusU, *VminusU, *invVminusU, *Qpower; | ^ [ 57%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Stats.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Stats.cpp.o -MF CMakeFiles/moose_builtins.dir/Stats.cpp.o.d -o CMakeFiles/moose_builtins.dir/Stats.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Stats.cpp [ 58%] Building CXX object mesh/CMakeFiles/mesh.dir/SpineMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/SpineMesh.cpp.o -MF CMakeFiles/mesh.dir/SpineMesh.cpp.o.d -o CMakeFiles/mesh.dir/SpineMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/SpineMesh.cpp [ 58%] Building CXX object biophysics/CMakeFiles/biophysics.dir/VClamp.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/VClamp.cpp.o -MF CMakeFiles/biophysics.dir/VClamp.cpp.o.d -o CMakeFiles/biophysics.dir/VClamp.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/VClamp.cpp [ 58%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Spine.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Spine.cpp.o -MF CMakeFiles/biophysics.dir/Spine.cpp.o.d -o CMakeFiles/biophysics.dir/Spine.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Spine.cpp [ 58%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o -MF CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o.d -o CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Interpol2D.cpp [ 58%] Building CXX object mesh/CMakeFiles/mesh.dir/PsdMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/PsdMesh.cpp.o -MF CMakeFiles/mesh.dir/PsdMesh.cpp.o.d -o CMakeFiles/mesh.dir/PsdMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/PsdMesh.cpp [ 59%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o -MF CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovGslSolver.cpp [ 60%] Building CXX object mesh/CMakeFiles/mesh.dir/testMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/testMesh.cpp.o -MF CMakeFiles/mesh.dir/testMesh.cpp.o.d -o CMakeFiles/mesh.dir/testMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/testMesh.cpp [ 60%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o -MF CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o.d -o CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp [ 60%] Linking CXX static library libmesh.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/cmake -P CMakeFiles/mesh.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mesh.dir/link.txt --verbose=1 /usr/bin/ar qc libmesh.a CMakeFiles/mesh.dir/ChemCompt.cpp.o CMakeFiles/mesh.dir/MeshCompt.cpp.o CMakeFiles/mesh.dir/MeshEntry.cpp.o CMakeFiles/mesh.dir/CubeMesh.cpp.o CMakeFiles/mesh.dir/CylBase.cpp.o CMakeFiles/mesh.dir/CylMesh.cpp.o CMakeFiles/mesh.dir/NeuroNode.cpp.o CMakeFiles/mesh.dir/NeuroMesh.cpp.o CMakeFiles/mesh.dir/SpineEntry.cpp.o CMakeFiles/mesh.dir/SpineMesh.cpp.o CMakeFiles/mesh.dir/PsdMesh.cpp.o CMakeFiles/mesh.dir/testMesh.cpp.o /usr/bin/ranlib libmesh.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 60%] Built target mesh /usr/bin/gmake -f mpi/CMakeFiles/moose_mpi.dir/build.make mpi/CMakeFiles/moose_mpi.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi/CMakeFiles/moose_mpi.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f mpi/CMakeFiles/moose_mpi.dir/build.make mpi/CMakeFiles/moose_mpi.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 60%] Building CXX object mpi/CMakeFiles/moose_mpi.dir/PostMaster.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mpi/CMakeFiles/moose_mpi.dir/PostMaster.cpp.o -MF CMakeFiles/moose_mpi.dir/PostMaster.cpp.o.d -o CMakeFiles/moose_mpi.dir/PostMaster.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/PostMaster.cpp [ 60%] Linking CXX static library libbiophysics.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/cmake -P CMakeFiles/biophysics.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/cmake -E cmake_link_script CMakeFiles/biophysics.dir/link.txt --verbose=1 /usr/bin/ar qc libbiophysics.a CMakeFiles/biophysics.dir/IntFire.cpp.o CMakeFiles/biophysics.dir/SpikeGen.cpp.o CMakeFiles/biophysics.dir/RandSpike.cpp.o CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o CMakeFiles/biophysics.dir/CompartmentBase.cpp.o CMakeFiles/biophysics.dir/Compartment.cpp.o CMakeFiles/biophysics.dir/SymCompartment.cpp.o CMakeFiles/biophysics.dir/GapJunction.cpp.o CMakeFiles/biophysics.dir/ChanBase.cpp.o CMakeFiles/biophysics.dir/ChanCommon.cpp.o CMakeFiles/biophysics.dir/HHChannel.cpp.o CMakeFiles/biophysics.dir/HHChannelBase.cpp.o CMakeFiles/biophysics.dir/HHChannel2D.cpp.o CMakeFiles/biophysics.dir/HHGate.cpp.o CMakeFiles/biophysics.dir/HHGate2D.cpp.o CMakeFiles/biophysics.dir/CaConcBase.cpp.o CMakeFiles/biophysics.dir/CaConc.cpp.o CMakeFiles/biophysics.dir/MgBlock.cpp.o CMakeFiles/biophysics.dir/Nernst.cpp.o CMakeFiles/biophysics.dir/Neuron.cpp.o CMakeFiles/biophysics.dir/ReadCell.cpp.o CMakeFiles/biophysics.dir/SwcSegment.cpp.o CMakeFiles/biophysics.dir/ReadSwc.cpp.o CMakeFiles/biophysics.dir/SynChan.cpp.o CMakeFiles/biophysics.dir/NMDAChan.cpp.o CMakeFiles/biophysics.dir/testBiophysics.cpp.o CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o CMakeFiles/biophysics.dir/DifShell.cpp.o CMakeFiles/biophysics.dir/Leakage.cpp.o CMakeFiles/biophysics.dir/VectorTable.cpp.o CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o CMakeFiles/biophysics.dir/MarkovChannel.cpp.o CMakeFiles/biophysics.dir/MatrixOps.cpp.o CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o CMakeFiles/biophysics.dir/MarkovSolver.cpp.o CMakeFiles/biophysics.dir/VClamp.cpp.o CMakeFiles/biophysics.dir/Spine.cpp.o CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o /usr/bin/ranlib libbiophysics.a [ 61%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o -MF CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o.d -o CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/NSDFWriter.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 61%] Built target biophysics /usr/bin/gmake -f signeur/CMakeFiles/signeur.dir/build.make signeur/CMakeFiles/signeur.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../kinetics -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT signeur/CMakeFiles/signeur.dir/Adaptor.cpp.o -MF CMakeFiles/signeur.dir/Adaptor.cpp.o.d -o CMakeFiles/signeur.dir/Adaptor.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/Adaptor.cpp [ 63%] Building CXX object mpi/CMakeFiles/moose_mpi.dir/testMpi.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mpi/CMakeFiles/moose_mpi.dir/testMpi.cpp.o -MF CMakeFiles/moose_mpi.dir/testMpi.cpp.o.d -o CMakeFiles/moose_mpi.dir/testMpi.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/testMpi.cpp [ 63%] Linking CXX static library libmoose_mpi.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/cmake -P CMakeFiles/moose_mpi.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/cmake -E cmake_link_script CMakeFiles/moose_mpi.dir/link.txt --verbose=1 /usr/bin/ar qc libmoose_mpi.a CMakeFiles/moose_mpi.dir/PostMaster.cpp.o CMakeFiles/moose_mpi.dir/testMpi.cpp.o /usr/bin/ranlib libmoose_mpi.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 63%] Built target moose_mpi /usr/bin/gmake -f ksolve/CMakeFiles/ksolve.dir/build.make ksolve/CMakeFiles/ksolve.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve/CMakeFiles/ksolve.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f ksolve/CMakeFiles/ksolve.dir/build.make ksolve/CMakeFiles/ksolve.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 63%] Building CXX object ksolve/CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o -MF CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o.d -o CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o -c 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT signeur/CMakeFiles/signeur.dir/testSigNeur.cpp.o -MF CMakeFiles/signeur.dir/testSigNeur.cpp.o.d -o CMakeFiles/signeur.dir/testSigNeur.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/testSigNeur.cpp [ 63%] Linking CXX static library libsigneur.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur && /usr/bin/cmake -P CMakeFiles/signeur.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur && /usr/bin/cmake -E cmake_link_script CMakeFiles/signeur.dir/link.txt --verbose=1 /usr/bin/ar qc libsigneur.a CMakeFiles/signeur.dir/Adaptor.cpp.o CMakeFiles/signeur.dir/testSigNeur.cpp.o /usr/bin/ranlib libsigneur.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 63%] Built target signeur /usr/bin/gmake -f hsolve/CMakeFiles/hsolve.dir/build.make hsolve/CMakeFiles/hsolve.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveStruct.cpp.o -MF CMakeFiles/hsolve.dir/HSolveStruct.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveStruct.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveStruct.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp: In function ‘require_group(long, std::__cxx11::basic_string, std::allocator >)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp:107:12: warning: ‘current’ may be used uninitialized [-Wmaybe-uninitialized] 107 | return current; | ^~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp:87:24: note: ‘current’ was declared here 87 | hid_t prev = file, current; | ^~~~~~~ [ 65%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombiePool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombiePool.cpp.o -MF CMakeFiles/ksolve.dir/ZombiePool.cpp.o.d -o CMakeFiles/ksolve.dir/ZombiePool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombiePool.cpp [ 65%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HinesMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HinesMatrix.cpp.o -MF CMakeFiles/hsolve.dir/HinesMatrix.cpp.o.d -o CMakeFiles/hsolve.dir/HinesMatrix.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HinesMatrix.cpp [ 65%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieFunction.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieFunction.cpp.o -MF CMakeFiles/ksolve.dir/ZombieFunction.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieFunction.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieFunction.cpp [ 66%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolvePassive.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolvePassive.cpp.o -MF CMakeFiles/hsolve.dir/HSolvePassive.cpp.o.d -o CMakeFiles/hsolve.dir/HSolvePassive.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolvePassive.cpp [ 66%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o -MF CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieBufPool.cpp [ 66%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o -MF CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o.d -o CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5DataWriter.cpp [ 67%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieReac.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieReac.cpp.o -MF CMakeFiles/ksolve.dir/ZombieReac.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieReac.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieReac.cpp [ 67%] Building CXX object hsolve/CMakeFiles/hsolve.dir/RateLookup.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/RateLookup.cpp.o -MF CMakeFiles/hsolve.dir/RateLookup.cpp.o.d -o CMakeFiles/hsolve.dir/RateLookup.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/RateLookup.cpp [ 67%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieEnz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieEnz.cpp.o -MF CMakeFiles/ksolve.dir/ZombieEnz.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieEnz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieEnz.cpp [ 67%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveActive.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveActive.cpp.o -MF CMakeFiles/hsolve.dir/HSolveActive.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveActive.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveActive.cpp [ 68%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o -MF CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o.d -o CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/SpikeStats.cpp [ 68%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o -MF CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieMMenz.cpp [ 69%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o -MF CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveActiveSetup.cpp [ 69%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o -MF CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o.d -o CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testBuiltins.cpp [ 70%] Building CXX object ksolve/CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o -MF CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o.d -o CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/VoxelPoolsBase.cpp [ 70%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/testNSDF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/testNSDF.cpp.o -MF CMakeFiles/moose_builtins.dir/testNSDF.cpp.o.d -o CMakeFiles/moose_builtins.dir/testNSDF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testNSDF.cpp [ 70%] Building CXX object ksolve/CMakeFiles/ksolve.dir/VoxelPools.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/VoxelPools.cpp.o -MF CMakeFiles/ksolve.dir/VoxelPools.cpp.o.d -o CMakeFiles/ksolve.dir/VoxelPools.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/VoxelPools.cpp [ 71%] Building CXX object ksolve/CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o -MF CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o.d -o CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/GssaVoxelPools.cpp [ 71%] Building CXX object ksolve/CMakeFiles/ksolve.dir/RateTerm.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/RateTerm.cpp.o -MF CMakeFiles/ksolve.dir/RateTerm.cpp.o.d -o CMakeFiles/ksolve.dir/RateTerm.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/RateTerm.cpp [ 71%] Building CXX object ksolve/CMakeFiles/ksolve.dir/FuncTerm.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/FuncTerm.cpp.o -MF CMakeFiles/ksolve.dir/FuncTerm.cpp.o.d -o CMakeFiles/ksolve.dir/FuncTerm.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/FuncTerm.cpp [ 71%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveInterface.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveInterface.cpp.o -MF CMakeFiles/hsolve.dir/HSolveInterface.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveInterface.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveInterface.cpp [ 72%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Stoich.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/Stoich.cpp.o -MF CMakeFiles/ksolve.dir/Stoich.cpp.o.d -o CMakeFiles/ksolve.dir/Stoich.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/Stoich.cpp [ 73%] Linking CXX static library libmoose_builtins.a [ 73%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Ksolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/cmake -P CMakeFiles/moose_builtins.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/Ksolve.cpp.o -MF CMakeFiles/ksolve.dir/Ksolve.cpp.o.d -o CMakeFiles/ksolve.dir/Ksolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/Ksolve.cpp cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/cmake -E cmake_link_script CMakeFiles/moose_builtins.dir/link.txt --verbose=1 /usr/bin/ar qc libmoose_builtins.a CMakeFiles/moose_builtins.dir/Arith.cpp.o CMakeFiles/moose_builtins.dir/Group.cpp.o CMakeFiles/moose_builtins.dir/Mstring.cpp.o CMakeFiles/moose_builtins.dir/Func.cpp.o CMakeFiles/moose_builtins.dir/Function.cpp.o CMakeFiles/moose_builtins.dir/Variable.cpp.o CMakeFiles/moose_builtins.dir/InputVariable.cpp.o CMakeFiles/moose_builtins.dir/TableBase.cpp.o CMakeFiles/moose_builtins.dir/Table.cpp.o CMakeFiles/moose_builtins.dir/Interpol.cpp.o CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o CMakeFiles/moose_builtins.dir/TimeTable.cpp.o CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o CMakeFiles/moose_builtins.dir/Streamer.cpp.o CMakeFiles/moose_builtins.dir/Stats.cpp.o CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o CMakeFiles/moose_builtins.dir/testNSDF.cpp.o /usr/bin/ranlib libmoose_builtins.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 73%] Built target moose_builtins /usr/bin/gmake -f diffusion/CMakeFiles/diffusion.dir/build.make diffusion/CMakeFiles/diffusion.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion/CMakeFiles/diffusion.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f diffusion/CMakeFiles/diffusion.dir/build.make diffusion/CMakeFiles/diffusion.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 73%] Building CXX object diffusion/CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o -MF CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o.d -o CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/FastMatrixElim.cpp [ 74%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolve.cpp.o -MF CMakeFiles/hsolve.dir/HSolve.cpp.o.d -o CMakeFiles/hsolve.dir/HSolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp: In member function ‘void HSolve::zombify(Eref) const’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:218:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 218 | for ( i = compartmentId_.begin(); i != compartmentId_.end(); ++i ) | ^~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:222:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 222 | temp.clear(); | ^~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:226:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 226 | for ( i = caConcId_.begin(); i != caConcId_.end(); ++i ) | ^~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:229:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 229 | temp.clear(); | ^~~~ [ 74%] Building CXX object diffusion/CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o -MF CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o.d -o CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/DiffPoolVec.cpp [ 75%] Building CXX object diffusion/CMakeFiles/diffusion.dir/Dsolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/Dsolve.cpp.o -MF CMakeFiles/diffusion.dir/Dsolve.cpp.o.d -o CMakeFiles/diffusion.dir/Dsolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/Dsolve.cpp [ 75%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveUtils.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveUtils.cpp.o -MF CMakeFiles/hsolve.dir/HSolveUtils.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveUtils.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveUtils.cpp [ 76%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Gsolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/Gsolve.cpp.o -MF CMakeFiles/ksolve.dir/Gsolve.cpp.o.d -o CMakeFiles/ksolve.dir/Gsolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/Gsolve.cpp [ 76%] Building CXX object hsolve/CMakeFiles/hsolve.dir/testHSolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/testHSolve.cpp.o -MF CMakeFiles/hsolve.dir/testHSolve.cpp.o.d -o CMakeFiles/hsolve.dir/testHSolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/testHSolve.cpp [ 77%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o -MF CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o.d -o CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/ZombieCompartment.cpp [ 77%] Building CXX object diffusion/CMakeFiles/diffusion.dir/testDiffusion.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/testDiffusion.cpp.o -MF CMakeFiles/diffusion.dir/testDiffusion.cpp.o.d -o CMakeFiles/diffusion.dir/testDiffusion.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/testDiffusion.cpp [ 77%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o -MF CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o.d -o CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombiePoolInterface.cpp [ 77%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o -MF CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o.d -o CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/ZombieCaConc.cpp [ 78%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o -MF CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o.d -o CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/ZombieHHChannel.cpp [ 78%] Building CXX object ksolve/CMakeFiles/ksolve.dir/testKsolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/testKsolve.cpp.o -MF CMakeFiles/ksolve.dir/testKsolve.cpp.o.d -o CMakeFiles/ksolve.dir/testKsolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/testKsolve.cpp [ 78%] Linking CXX static library libhsolve.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/cmake -P CMakeFiles/hsolve.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/cmake -E cmake_link_script CMakeFiles/hsolve.dir/link.txt --verbose=1 /usr/bin/ar qc libhsolve.a CMakeFiles/hsolve.dir/HSolveStruct.cpp.o CMakeFiles/hsolve.dir/HinesMatrix.cpp.o CMakeFiles/hsolve.dir/HSolvePassive.cpp.o CMakeFiles/hsolve.dir/RateLookup.cpp.o CMakeFiles/hsolve.dir/HSolveActive.cpp.o CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o CMakeFiles/hsolve.dir/HSolveInterface.cpp.o CMakeFiles/hsolve.dir/HSolve.cpp.o CMakeFiles/hsolve.dir/HSolveUtils.cpp.o CMakeFiles/hsolve.dir/testHSolve.cpp.o CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o /usr/bin/ranlib libhsolve.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 78%] Built target hsolve /usr/bin/gmake -f device/CMakeFiles/device.dir/build.make device/CMakeFiles/device.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/PulseGen.cpp.o -MF CMakeFiles/device.dir/PulseGen.cpp.o.d -o CMakeFiles/device.dir/PulseGen.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/PulseGen.cpp [ 78%] Linking CXX static library libdiffusion.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/cmake -P CMakeFiles/diffusion.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/diffusion.dir/link.txt --verbose=1 /usr/bin/ar qc libdiffusion.a CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o CMakeFiles/diffusion.dir/Dsolve.cpp.o CMakeFiles/diffusion.dir/testDiffusion.cpp.o /usr/bin/ranlib libdiffusion.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 78%] Built target diffusion /usr/bin/gmake -f benchmarks/CMakeFiles/benchmarks.dir/build.make benchmarks/CMakeFiles/benchmarks.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks/CMakeFiles/benchmarks.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f benchmarks/CMakeFiles/benchmarks.dir/build.make benchmarks/CMakeFiles/benchmarks.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 78%] Building CXX object benchmarks/CMakeFiles/benchmarks.dir/benchmarks.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT benchmarks/CMakeFiles/benchmarks.dir/benchmarks.cpp.o -MF CMakeFiles/benchmarks.dir/benchmarks.cpp.o.d -o CMakeFiles/benchmarks.dir/benchmarks.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/benchmarks.cpp [ 79%] Building CXX object benchmarks/CMakeFiles/benchmarks.dir/kineticMarks.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT benchmarks/CMakeFiles/benchmarks.dir/kineticMarks.cpp.o -MF CMakeFiles/benchmarks.dir/kineticMarks.cpp.o.d -o CMakeFiles/benchmarks.dir/kineticMarks.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/kineticMarks.cpp [ 79%] Linking CXX static library libbenchmarks.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/cmake -P CMakeFiles/benchmarks.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/cmake -E cmake_link_script CMakeFiles/benchmarks.dir/link.txt --verbose=1 /usr/bin/ar qc libbenchmarks.a CMakeFiles/benchmarks.dir/benchmarks.cpp.o CMakeFiles/benchmarks.dir/kineticMarks.cpp.o /usr/bin/ranlib libbenchmarks.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 79%] Built target benchmarks /usr/bin/gmake -f kinetics/CMakeFiles/kinetics.dir/build.make kinetics/CMakeFiles/kinetics.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics/CMakeFiles/kinetics.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f kinetics/CMakeFiles/kinetics.dir/build.make kinetics/CMakeFiles/kinetics.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 80%] Building CXX object kinetics/CMakeFiles/kinetics.dir/PoolBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/PoolBase.cpp.o -MF CMakeFiles/kinetics.dir/PoolBase.cpp.o.d -o CMakeFiles/kinetics.dir/PoolBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/PoolBase.cpp [ 81%] Building CXX object ksolve/CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o -MF CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o.d -o CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/SteadyStateGsl.cpp [ 81%] Building CXX object device/CMakeFiles/device.dir/DiffAmp.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/DiffAmp.cpp.o -MF CMakeFiles/device.dir/DiffAmp.cpp.o.d -o CMakeFiles/device.dir/DiffAmp.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/DiffAmp.cpp [ 82%] Building CXX object device/CMakeFiles/device.dir/PIDController.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/PIDController.cpp.o -MF CMakeFiles/device.dir/PIDController.cpp.o.d -o CMakeFiles/device.dir/PIDController.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/PIDController.cpp [ 82%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Pool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Pool.cpp.o -MF CMakeFiles/kinetics.dir/Pool.cpp.o.d -o CMakeFiles/kinetics.dir/Pool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Pool.cpp [ 82%] Building CXX object device/CMakeFiles/device.dir/RC.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/RC.cpp.o -MF CMakeFiles/device.dir/RC.cpp.o.d -o CMakeFiles/device.dir/RC.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/RC.cpp [ 83%] Building CXX object kinetics/CMakeFiles/kinetics.dir/BufPool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/BufPool.cpp.o -MF CMakeFiles/kinetics.dir/BufPool.cpp.o.d -o CMakeFiles/kinetics.dir/BufPool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/BufPool.cpp [ 83%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReacBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/ReacBase.cpp.o -MF CMakeFiles/kinetics.dir/ReacBase.cpp.o.d -o CMakeFiles/kinetics.dir/ReacBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/ReacBase.cpp [ 83%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Reac.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Reac.cpp.o -MF CMakeFiles/kinetics.dir/Reac.cpp.o.d -o CMakeFiles/kinetics.dir/Reac.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Reac.cpp [ 84%] Linking CXX static library libdevice.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/cmake -P CMakeFiles/device.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/cmake -E cmake_link_script CMakeFiles/device.dir/link.txt --verbose=1 /usr/bin/ar qc libdevice.a CMakeFiles/device.dir/PulseGen.cpp.o CMakeFiles/device.dir/DiffAmp.cpp.o CMakeFiles/device.dir/PIDController.cpp.o CMakeFiles/device.dir/RC.cpp.o /usr/bin/ranlib libdevice.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 84%] Built target device /usr/bin/gmake -f synapse/CMakeFiles/synapse.dir/build.make synapse/CMakeFiles/synapse.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse/CMakeFiles/synapse.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f synapse/CMakeFiles/synapse.dir/build.make synapse/CMakeFiles/synapse.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 85%] Building CXX object synapse/CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o -MF CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o.d -o CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/GraupnerBrunel2012CaPlasticitySynHandler.cpp [ 86%] Building CXX object kinetics/CMakeFiles/kinetics.dir/EnzBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/EnzBase.cpp.o -MF CMakeFiles/kinetics.dir/EnzBase.cpp.o.d -o CMakeFiles/kinetics.dir/EnzBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/EnzBase.cpp [ 86%] Linking CXX static library libksolve.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/cmake -P CMakeFiles/ksolve.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/cmake -E cmake_link_script CMakeFiles/ksolve.dir/link.txt --verbose=1 /usr/bin/ar qc libksolve.a CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o CMakeFiles/ksolve.dir/ZombiePool.cpp.o CMakeFiles/ksolve.dir/ZombieFunction.cpp.o CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o CMakeFiles/ksolve.dir/ZombieReac.cpp.o CMakeFiles/ksolve.dir/ZombieEnz.cpp.o CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o CMakeFiles/ksolve.dir/VoxelPools.cpp.o CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o CMakeFiles/ksolve.dir/RateTerm.cpp.o CMakeFiles/ksolve.dir/FuncTerm.cpp.o CMakeFiles/ksolve.dir/Stoich.cpp.o CMakeFiles/ksolve.dir/Ksolve.cpp.o CMakeFiles/ksolve.dir/Gsolve.cpp.o CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o CMakeFiles/ksolve.dir/testKsolve.cpp.o CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o /usr/bin/ranlib libksolve.a [ 86%] Building CXX object kinetics/CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o -MF CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o.d -o CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/CplxEnzBase.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 86%] Built target ksolve [ 87%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Enz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Enz.cpp.o -MF CMakeFiles/kinetics.dir/Enz.cpp.o.d -o CMakeFiles/kinetics.dir/Enz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Enz.cpp [ 87%] Building CXX object kinetics/CMakeFiles/kinetics.dir/MMenz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/MMenz.cpp.o -MF CMakeFiles/kinetics.dir/MMenz.cpp.o.d -o CMakeFiles/kinetics.dir/MMenz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/MMenz.cpp [ 87%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Species.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Species.cpp.o -MF CMakeFiles/kinetics.dir/Species.cpp.o.d -o CMakeFiles/kinetics.dir/Species.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Species.cpp [ 88%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReadKkit.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/ReadKkit.cpp.o -MF CMakeFiles/kinetics.dir/ReadKkit.cpp.o.d -o CMakeFiles/kinetics.dir/ReadKkit.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/ReadKkit.cpp [ 88%] Building CXX object synapse/CMakeFiles/synapse.dir/RollingMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/RollingMatrix.cpp.o -MF CMakeFiles/synapse.dir/RollingMatrix.cpp.o.d -o CMakeFiles/synapse.dir/RollingMatrix.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/RollingMatrix.cpp [ 88%] Building CXX object kinetics/CMakeFiles/kinetics.dir/WriteKkit.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/WriteKkit.cpp.o -MF CMakeFiles/kinetics.dir/WriteKkit.cpp.o.d -o CMakeFiles/kinetics.dir/WriteKkit.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp [ 89%] Building CXX object synapse/CMakeFiles/synapse.dir/STDPSynHandler.cpp.o /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp: In function ‘void writePlot(std::ofstream&, Id, std::string, std::string, double, double)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:281:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 281 | if ( pos == string::npos ) | ^~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:283:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 283 | if ( pos == string::npos ) | ^~ cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/STDPSynHandler.cpp.o -MF CMakeFiles/synapse.dir/STDPSynHandler.cpp.o.d -o CMakeFiles/synapse.dir/STDPSynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/STDPSynHandler.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp: In function ‘void storePlotMsgs(Id, std::vector >&, Id, std::string, Id)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:422:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 422 | if ( pos == string::npos ) | ^~ In file included from /usr/include/c++/14/cassert:44, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/header.h:29, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:15: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:424:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 424 | assert( pos != string::npos ); | ^~~~~~ [ 90%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReadCspace.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/ReadCspace.cpp.o -MF CMakeFiles/kinetics.dir/ReadCspace.cpp.o.d -o CMakeFiles/kinetics.dir/ReadCspace.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/ReadCspace.cpp [ 90%] Building CXX object synapse/CMakeFiles/synapse.dir/STDPSynapse.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/STDPSynapse.cpp.o -MF CMakeFiles/synapse.dir/STDPSynapse.cpp.o.d -o CMakeFiles/synapse.dir/STDPSynapse.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/STDPSynapse.cpp [ 90%] Building CXX object kinetics/CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o -MF CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o.d -o CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/lookupVolumeFromMesh.cpp [ 90%] Building CXX object kinetics/CMakeFiles/kinetics.dir/testKinetics.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/testKinetics.cpp.o -MF CMakeFiles/kinetics.dir/testKinetics.cpp.o.d -o CMakeFiles/kinetics.dir/testKinetics.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/testKinetics.cpp [ 90%] Building CXX object synapse/CMakeFiles/synapse.dir/SeqSynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/SeqSynHandler.cpp.o -MF CMakeFiles/synapse.dir/SeqSynHandler.cpp.o.d -o CMakeFiles/synapse.dir/SeqSynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/SeqSynHandler.cpp [ 91%] Building CXX object synapse/CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o -MF CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o.d -o CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/SimpleSynHandler.cpp [ 91%] Building CXX object synapse/CMakeFiles/synapse.dir/SynHandlerBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/SynHandlerBase.cpp.o -MF CMakeFiles/synapse.dir/SynHandlerBase.cpp.o.d -o CMakeFiles/synapse.dir/SynHandlerBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/SynHandlerBase.cpp [ 92%] Building CXX object synapse/CMakeFiles/synapse.dir/Synapse.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/Synapse.cpp.o -MF CMakeFiles/synapse.dir/Synapse.cpp.o.d -o CMakeFiles/synapse.dir/Synapse.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/Synapse.cpp [ 93%] Linking CXX static library libkinetics.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/cmake -P CMakeFiles/kinetics.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/cmake -E cmake_link_script CMakeFiles/kinetics.dir/link.txt --verbose=1 /usr/bin/ar qc libkinetics.a CMakeFiles/kinetics.dir/PoolBase.cpp.o CMakeFiles/kinetics.dir/Pool.cpp.o CMakeFiles/kinetics.dir/BufPool.cpp.o CMakeFiles/kinetics.dir/ReacBase.cpp.o CMakeFiles/kinetics.dir/Reac.cpp.o CMakeFiles/kinetics.dir/EnzBase.cpp.o CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o CMakeFiles/kinetics.dir/Enz.cpp.o CMakeFiles/kinetics.dir/MMenz.cpp.o CMakeFiles/kinetics.dir/Species.cpp.o CMakeFiles/kinetics.dir/ReadKkit.cpp.o CMakeFiles/kinetics.dir/WriteKkit.cpp.o CMakeFiles/kinetics.dir/ReadCspace.cpp.o CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o CMakeFiles/kinetics.dir/testKinetics.cpp.o /usr/bin/ranlib libkinetics.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 93%] Built target kinetics [ 93%] Building CXX object synapse/CMakeFiles/synapse.dir/testSynapse.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/testSynapse.cpp.o -MF CMakeFiles/synapse.dir/testSynapse.cpp.o.d -o CMakeFiles/synapse.dir/testSynapse.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/testSynapse.cpp [ 93%] Linking CXX static library libsynapse.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/cmake -P CMakeFiles/synapse.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/cmake -E cmake_link_script CMakeFiles/synapse.dir/link.txt --verbose=1 /usr/bin/ar qc libsynapse.a CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o CMakeFiles/synapse.dir/RollingMatrix.cpp.o CMakeFiles/synapse.dir/STDPSynHandler.cpp.o CMakeFiles/synapse.dir/STDPSynapse.cpp.o CMakeFiles/synapse.dir/SeqSynHandler.cpp.o CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o CMakeFiles/synapse.dir/SynHandlerBase.cpp.o CMakeFiles/synapse.dir/Synapse.cpp.o CMakeFiles/synapse.dir/testSynapse.cpp.o /usr/bin/ranlib libsynapse.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 93%] Built target synapse /usr/bin/gmake -f CMakeFiles/libmoose.dir/build.make CMakeFiles/libmoose.dir/depend /usr/bin/gmake -f pymoose/CMakeFiles/_moose.dir/build.make pymoose/CMakeFiles/_moose.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/libmoose.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose/CMakeFiles/_moose.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/libmoose.dir/build.make CMakeFiles/libmoose.dir/build /usr/bin/gmake -f pymoose/CMakeFiles/_moose.dir/build.make pymoose/CMakeFiles/_moose.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 94%] Building CXX object pymoose/CMakeFiles/_moose.dir/mfield.cpp.o [ 94%] Building CXX object pymoose/CMakeFiles/_moose.dir/vec.cpp.o [ 94%] Building CXX object pymoose/CMakeFiles/_moose.dir/moosemodule.cpp.o [ 95%] Building CXX object CMakeFiles/libmoose.dir/basecode/main.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/vec.cpp.o -MF CMakeFiles/_moose.dir/vec.cpp.o.d -o CMakeFiles/_moose.dir/vec.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/vec.cpp /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_LIB -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -Dlibmoose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT CMakeFiles/libmoose.dir/basecode/main.cpp.o -MF CMakeFiles/libmoose.dir/basecode/main.cpp.o.d -o CMakeFiles/libmoose.dir/basecode/main.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/main.cpp cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/moosemodule.cpp.o -MF CMakeFiles/_moose.dir/moosemodule.cpp.o.d -o CMakeFiles/_moose.dir/moosemodule.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/mfield.cpp.o -MF CMakeFiles/_moose.dir/mfield.cpp.o.d -o CMakeFiles/_moose.dir/mfield.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/mfield.cpp [ 95%] Linking CXX shared library libmoose.so /usr/bin/cmake -E cmake_link_script CMakeFiles/libmoose.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libmoose.so -o libmoose.so CMakeFiles/libmoose.dir/basecode/main.cpp.o -L/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build -Wl,--whole-archive external/muparser/libmuparser.a builtins/libmoose_builtins.a msg/libmsg.a benchmarks/libbenchmarks.a shell/libshell.a randnum/librandnum.a scheduling/libscheduling.a mpi/libmoose_mpi.a biophysics/libbiophysics.a utility/libutility.a kinetics/libkinetics.a synapse/libsynapse.a intfire/libintfire.a hsolve/libhsolve.a mesh/libmesh.a signeur/libsigneur.a diffusion/libdiffusion.a ksolve/libksolve.a device/libdevice.a basecode/libbasecode.a -Wl,--no-whole-archive -lhdf5_cpp -lhdf5 -lhdf5_hl_cpp -lhdf5_hl -lgsl -lgslcblas In file included from /usr/include/c++/14/aarch64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /usr/include/c++/14/iostream:41, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:42: In member function ‘std::__new_allocator::construct(PyGetSetDef*, PyGetSetDef const&)void’, inlined from ‘std::allocator_traits >::construct(std::allocator&, PyGetSetDef*, PyGetSetDef const&)void’ at /usr/include/c++/14/bits/alloc_traits.h:534:17, inlined from ‘std::vector >::push_back(PyGetSetDef const&)’ at /usr/include/c++/14/bits/stl_vector.h:1288:30, inlined from ‘defineLookupFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2821:46: /usr/include/c++/14/bits/new_allocator.h:191:11: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp: In function ‘defineLookupFinfos(Cinfo const*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2820:21: note: ‘getset’ declared here 2820 | PyGetSetDef getset; | ^~~~~~ In file included from /usr/include/c++/14/vector:66, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../utility/print_function.hpp:29, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:60: In member function ‘std::vector >::push_back(PyGetSetDef const&)’, inlined from ‘defineLookupFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2821:46: /usr/include/c++/14/bits/stl_vector.h:1294:28: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 1294 | _M_realloc_append(__x); | ~~~~~~~~~~~~~~~~~^~~~~ In file included from /usr/include/c++/14/vector:72: /usr/include/c++/14/bits/vector.tcc: In function ‘defineLookupFinfos(Cinfo const*)’: /usr/include/c++/14/bits/vector.tcc:581:7: note: by argument 2 of type ‘const struct PyGetSetDef &’ to ‘std::vector >::_M_realloc_append(PyGetSetDef const&)void’ declared here 581 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2820:21: note: ‘getset’ declared here 2820 | PyGetSetDef getset; | ^~~~~~ In member function ‘std::__new_allocator::construct(PyGetSetDef*, PyGetSetDef const&)void’, inlined from ‘std::allocator_traits >::construct(std::allocator&, PyGetSetDef*, PyGetSetDef const&)void’ at /usr/include/c++/14/bits/alloc_traits.h:534:17, inlined from ‘std::vector >::push_back(PyGetSetDef const&)’ at /usr/include/c++/14/bits/stl_vector.h:1288:30, inlined from ‘defineElementFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2897:46: /usr/include/c++/14/bits/new_allocator.h:191:11: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp: In function ‘defineElementFinfos(Cinfo const*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2896:21: note: ‘getset’ declared here 2896 | PyGetSetDef getset; | ^~~~~~ In member function ‘std::vector >::push_back(PyGetSetDef const&)’, inlined from ‘defineElementFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2897:46: /usr/include/c++/14/bits/stl_vector.h:1294:28: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 1294 | _M_realloc_append(__x); | ~~~~~~~~~~~~~~~~~^~~~~ /usr/include/c++/14/bits/vector.tcc: In function ‘defineElementFinfos(Cinfo const*)’: /usr/include/c++/14/bits/vector.tcc:581:7: note: by argument 2 of type ‘const struct PyGetSetDef &’ to ‘std::vector >::_M_realloc_append(PyGetSetDef const&)void’ declared here 581 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2896:21: note: ‘getset’ declared here 2896 | PyGetSetDef getset; | ^~~~~~ [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/pymooseinit.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/pymooseinit.cpp.o -MF CMakeFiles/_moose.dir/pymooseinit.cpp.o.d -o CMakeFiles/_moose.dir/pymooseinit.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/pymooseinit.cpp [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/melement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/melement.cpp.o -MF CMakeFiles/_moose.dir/melement.cpp.o.d -o CMakeFiles/_moose.dir/melement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/melement.cpp [ 96%] Building CXX object pymoose/CMakeFiles/_moose.dir/test_moosemodule.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/test_moosemodule.cpp.o -MF CMakeFiles/_moose.dir/test_moosemodule.cpp.o.d -o CMakeFiles/_moose.dir/test_moosemodule.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/test_moosemodule.cpp [ 96%] Building CXX object pymoose/CMakeFiles/_moose.dir/PyRun.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.13/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.13 -I/usr/include/python3.13 -MD -MT pymoose/CMakeFiles/_moose.dir/PyRun.cpp.o -MF CMakeFiles/_moose.dir/PyRun.cpp.o.d -o CMakeFiles/_moose.dir/PyRun.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.cpp In file included from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.cpp:50: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.h: In function ‘std::string get_program_name()’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.h:58:41: warning: ‘wchar_t* Py_GetProgramName()’ is deprecated [-Wdeprecated-declarations] 58 | wchar_t * progname = Py_GetProgramName(); | ~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/python3.13/Python.h:123, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.cpp:48: /usr/include/python3.13/pylifecycle.h:38:43: note: declared here 38 | Py_DEPRECATED(3.13) PyAPI_FUNC(wchar_t *) Py_GetProgramName(void); | ^~~~~~~~~~~~~~~~~ /usr/bin/ld: /tmp/cckt1b9K.ltrans17.ltrans.o: in function `testCreateStringDataset()': /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testNSDF.cpp:76:(.text+0x8d20): warning: the use of `tmpnam' is dangerous, better use `mkstemp' gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 96%] Built target libmoose /usr/bin/gmake -f CMakeFiles/moose.bin.dir/build.make CMakeFiles/moose.bin.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/moose.bin.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/moose.bin.dir/build.make CMakeFiles/moose.bin.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 96%] Building CXX object CMakeFiles/moose.bin.dir/basecode/main.cpp.o /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT CMakeFiles/moose.bin.dir/basecode/main.cpp.o -MF CMakeFiles/moose.bin.dir/basecode/main.cpp.o.d -o CMakeFiles/moose.bin.dir/basecode/main.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/main.cpp [ 97%] Linking CXX executable moose.bin /usr/bin/cmake -E cmake_link_script CMakeFiles/moose.bin.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id -rdynamic CMakeFiles/moose.bin.dir/basecode/main.cpp.o -o moose.bin -L/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build -lmoose -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 97%] Built target moose.bin [ 98%] Linking CXX shared module ../python/moose/_moose.so cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/cmake -E cmake_link_script CMakeFiles/_moose.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id -shared -o ../python/moose/_moose.so CMakeFiles/_moose.dir/moosemodule.cpp.o CMakeFiles/_moose.dir/vec.cpp.o CMakeFiles/_moose.dir/mfield.cpp.o CMakeFiles/_moose.dir/pymooseinit.cpp.o CMakeFiles/_moose.dir/melement.cpp.o CMakeFiles/_moose.dir/test_moosemodule.cpp.o CMakeFiles/_moose.dir/PyRun.cpp.o -L/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build -Wl,--whole-archive ../external/muparser/libmuparser.a ../builtins/libmoose_builtins.a ../msg/libmsg.a ../benchmarks/libbenchmarks.a ../shell/libshell.a ../randnum/librandnum.a ../scheduling/libscheduling.a ../mpi/libmoose_mpi.a ../biophysics/libbiophysics.a ../utility/libutility.a ../kinetics/libkinetics.a ../synapse/libsynapse.a ../intfire/libintfire.a ../hsolve/libhsolve.a ../mesh/libmesh.a ../signeur/libsigneur.a ../diffusion/libdiffusion.a ../ksolve/libksolve.a ../device/libdevice.a ../basecode/libbasecode.a -Wl,--no-whole-archive -lhdf5_cpp -lhdf5 -lhdf5_hl_cpp -lhdf5_hl -lgsl -lgslcblas /usr/bin/ld: /tmp/ccL5mHkJ.ltrans58.ltrans.o: in function `testCreateStringDataset()': /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testNSDF.cpp:76:(.text+0x481c): warning: the use of `tmpnam' is dangerous, better use `mkstemp' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/cmake -E cmake_echo_color --cyan "MOOSE python extention is successfully built. Now " " Run 'sudo make install' to install it. " " " "NOTE: Run 'pip uninstall moose' to uninstall moose." MOOSE python extention is successfully built. Now Run 'sudo make install' to install it. NOTE: Run 'pip uninstall moose' to uninstall moose. gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 98%] Built target _moose /usr/bin/gmake -f CMakeFiles/copy_pymoose.dir/build.make CMakeFiles/copy_pymoose.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/copy_pymoose.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/copy_pymoose.dir/build.make CMakeFiles/copy_pymoose.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 99%] Copying required python files from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/python to to build directory /usr/bin/cmake -E copy_directory /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/python /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 99%] Built target copy_pymoose /usr/bin/gmake -f CMakeFiles/bdist.dir/build.make CMakeFiles/bdist.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/bdist.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/bdist.dir/build.make CMakeFiles/bdist.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [100%] bdist is saved to /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python && /usr/bin/python3 setup.cmake.py bdist_dumb -p CMAKE -d /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist /usr/lib/python3.13/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() /usr/lib/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib/python3.13/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib/python3.13/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib/python3.13/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib/python3.13/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib/python3.13/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib/python3.13/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib/python3.13/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? Got 3.1.5 from VERSION file [INFO] Suffix for python SO: .so Unarchiving bdist file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist/pymoose-3.1.5.CMAKE.tar.gz to /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose_bdist_install /usr/bin/cmake -E chdir /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose_bdist_install tar xvf /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist/pymoose-3.1.5.CMAKE.tar.gz ./ ./usr/ ./usr/lib/ ./usr/lib/python3.13/ ./usr/lib/python3.13/site-packages/ ./usr/lib/python3.13/site-packages/moose/ ./usr/lib/python3.13/site-packages/moose/SBML/ ./usr/lib/python3.13/site-packages/moose/SBML/__init__.py ./usr/lib/python3.13/site-packages/moose/SBML/__pycache__/ ./usr/lib/python3.13/site-packages/moose/SBML/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/SBML/__pycache__/readSBML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/SBML/__pycache__/validation.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/SBML/__pycache__/writeSBML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/SBML/readSBML.py ./usr/lib/python3.13/site-packages/moose/SBML/validation.py ./usr/lib/python3.13/site-packages/moose/SBML/writeSBML.py ./usr/lib/python3.13/site-packages/moose/__init__.py ./usr/lib/python3.13/site-packages/moose/__pycache__/ ./usr/lib/python3.13/site-packages/moose/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/alternate.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/constants.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/graph_utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/graphutil.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/hdfutil.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/merge.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/methods_utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/moose.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/moose_config.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/moose_constants.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/moose_test.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/optimizer_interface.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/plot_utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/print_utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/recording.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/__pycache__/utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/_moose.so ./usr/lib/python3.13/site-packages/moose/alternate.py ./usr/lib/python3.13/site-packages/moose/chemUtil/ ./usr/lib/python3.13/site-packages/moose/chemUtil/__init__.py ./usr/lib/python3.13/site-packages/moose/chemUtil/__pycache__/ ./usr/lib/python3.13/site-packages/moose/chemUtil/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/chemUtil/__pycache__/add_Delete_ChemicalSolver.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/chemUtil/__pycache__/chemConnectUtil.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/chemUtil/__pycache__/graphUtils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/chemUtil/add_Delete_ChemicalSolver.py ./usr/lib/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py ./usr/lib/python3.13/site-packages/moose/chemUtil/graphUtils.py ./usr/lib/python3.13/site-packages/moose/constants.py ./usr/lib/python3.13/site-packages/moose/genesis/ ./usr/lib/python3.13/site-packages/moose/genesis/__init__.py ./usr/lib/python3.13/site-packages/moose/genesis/__pycache__/ ./usr/lib/python3.13/site-packages/moose/genesis/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/genesis/__pycache__/writeKkit.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/genesis/writeKkit.py ./usr/lib/python3.13/site-packages/moose/graph_utils.py ./usr/lib/python3.13/site-packages/moose/graphutil.py ./usr/lib/python3.13/site-packages/moose/hdfutil.py ./usr/lib/python3.13/site-packages/moose/merge.py ./usr/lib/python3.13/site-packages/moose/methods_utils.py ./usr/lib/python3.13/site-packages/moose/moose.py ./usr/lib/python3.13/site-packages/moose/moose_config.py ./usr/lib/python3.13/site-packages/moose/moose_constants.py ./usr/lib/python3.13/site-packages/moose/moose_test.py ./usr/lib/python3.13/site-packages/moose/neuroml/ ./usr/lib/python3.13/site-packages/moose/neuroml/ChannelML.py ./usr/lib/python3.13/site-packages/moose/neuroml/MorphML.py ./usr/lib/python3.13/site-packages/moose/neuroml/NetworkML.py ./usr/lib/python3.13/site-packages/moose/neuroml/NeuroML.py ./usr/lib/python3.13/site-packages/moose/neuroml/__init__.py ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/ ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/ChannelML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/MorphML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/NetworkML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/NeuroML.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/__pycache__/utils.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml/utils.py ./usr/lib/python3.13/site-packages/moose/neuroml2/ ./usr/lib/python3.13/site-packages/moose/neuroml2/__init__.py ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/ ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/converter.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/generated_neuroml.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/generated_neuromlsub.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/hhfit.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/reader.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/test_converter.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/test_hhfit.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/test_reader.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/__pycache__/units.cpython-313.pyc ./usr/lib/python3.13/site-packages/moose/neuroml2/converter.py ./usr/lib/python3.13/site-packages/moose/neuroml2/generated_neuroml.py ./usr/lib/python3.13/site-packages/moose/neuroml2/generated_neuromlsub.py ./usr/lib/python3.13/site-packages/moose/neuroml2/hhfit.py ./usr/lib/python3.13/site-packages/moose/neuroml2/reader.py ./usr/lib/python3.13/site-packages/moose/neuroml2/test_converter.py ./usr/lib/python3.13/site-packages/moose/neuroml2/test_hhfit.py ./usr/lib/python3.13/site-packages/moose/neuroml2/test_reader.py ./usr/lib/python3.13/site-packages/moose/neuroml2/units.py ./usr/lib/python3.13/site-packages/moose/optimizer_interface.py ./usr/lib/python3.13/site-packages/moose/plot_utils.py ./usr/lib/python3.13/site-packages/moose/print_utils.py ./usr/lib/python3.13/site-packages/moose/recording.py ./usr/lib/python3.13/site-packages/moose/utils.py ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/ ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/PKG-INFO ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/SOURCES.txt ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/dependency_links.txt ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/requires.txt ./usr/lib/python3.13/site-packages/pymoose-3.1.5-py3.13.egg-info/top_level.txt ./usr/lib/python3.13/site-packages/rdesigneur/ ./usr/lib/python3.13/site-packages/rdesigneur/__init__.py ./usr/lib/python3.13/site-packages/rdesigneur/__pycache__/ ./usr/lib/python3.13/site-packages/rdesigneur/__pycache__/__init__.cpython-313.pyc ./usr/lib/python3.13/site-packages/rdesigneur/__pycache__/rdesigneur.cpython-313.pyc ./usr/lib/python3.13/site-packages/rdesigneur/__pycache__/rdesigneurProtos.cpython-313.pyc ./usr/lib/python3.13/site-packages/rdesigneur/__pycache__/rmoogli.cpython-313.pyc ./usr/lib/python3.13/site-packages/rdesigneur/rdesigneur.py ./usr/lib/python3.13/site-packages/rdesigneur/rdesigneurProtos.py ./usr/lib/python3.13/site-packages/rdesigneur/rmoogli.py gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [100%] Built target bdist gmake[1]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles 0 + pushd redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.cmake.py build '--executable=/usr/bin/python3 -sP' Got 3.1.5 from VERSION file [INFO] Suffix for python SO: .so + popd ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.EehV83 + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + '[' /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT ++ dirname /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT + mkdir -p /builddir/build/BUILD/moose-3.1.5-build + mkdir /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd moose-core-3.1.5 + install -vD redhat-linux-build/moose.bin /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose install: creating directory '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr' install: creating directory '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin' 'redhat-linux-build/moose.bin' -> '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose' + install -vDt /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/ redhat-linux-build/libmoose.so install: creating directory '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64' 'redhat-linux-build/libmoose.so' -> '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/libmoose.so' + pushd redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.cmake.py install -O1 --skip-build --root /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT --prefix /usr --install-lib=/usr/lib64/python3.13/site-packages /usr/lib/python3.13/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() /usr/lib64/python3.13/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' Got 3.1.5 from VERSION file [INFO] Suffix for python SO: .so + rm -rfv /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/__pycache__ + chmod +x /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/_moose.so + popd ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 3.1.5-22.fc42 --unique-debug-suffix -3.1.5-22.fc42.aarch64 --unique-debug-src-base moose-3.1.5-22.fc42.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 find-debuginfo: starting Extracting debug info from 3 files DWARF-compressing 3 files sepdebugcrcfix: Updated 3 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/moose-3.1.5-22.fc42.aarch64 7809 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13 using python3.13 /usr/lib64/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.13/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? /usr/lib64/python3.13/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/rdesigneurProtos.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/rdesigneurProtos.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/rmoogli.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/rdesigneur.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/rdesigneur/__pycache__/rdesigneur.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/recording.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/utils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/print_utils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/plot_utils.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/plot_utils.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/optimizer_interface.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/optimizer_interface.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/moose.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/moose.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/methods_utils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/graphutil.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/merge.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/graph_utils.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/graph_utils.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/hdfutil.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/moose_test.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/moose_constants.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/moose_config.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/constants.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/__pycache__/alternate.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/SBML/__pycache__/validation.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/SBML/__pycache__/writeSBML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/SBML/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/genesis/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/SBML/__pycache__/readSBML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/genesis/__pycache__/writeKkit.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/NeuroML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/NetworkML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/MorphML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/utils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml/__pycache__/ChannelML.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/test_converter.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/reader.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/reader.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/hhfit.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/units.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/test_reader.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/converter.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/generated_neuromlsub.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/test_hhfit.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/chemUtil/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/chemUtil/__pycache__/graphUtils.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/chemUtil/__pycache__/chemConnectUtil.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/chemUtil/__pycache__/add_Delete_ChemicalSolver.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages/moose/neuroml2/__pycache__/generated_neuroml.cpython-313.opt-1.pyc: rewriting with normalized contents Scanned 80 directories and 610 files, processed 54 inodes, 54 modified (14 replaced + 40 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/moose-3.1.5-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.BQaN8O + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd moose-core-3.1.5 + checksec --file=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose RELRO STACK CANARY NX PIE RPATH RUNPATH Symbols FORTIFY Fortified Fortifiable FILE Full RELRO Canary found NX enabled PIE enabled No RPATH No RUNPATH No Symbols No 0 1 /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose + pushd redhat-linux-build ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + ctest --output-on-failure -V -E test_streamer UpdateCTestConfiguration from :/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl Test project /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test_function 1: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_function.py" 1: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 1: Environment variables: 1: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 1: Test timeout computed to be: 1500 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' 1: ''' Setup compartment and its members pool,reaction,enz cplx under self.meshEntry dictionaries \ 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' 1: splitpath = re.sub("\[[0-9]+\]", "", splitpath) 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' 1: tabPath = re.sub("\[[0-9]+\]", "", tabPath) 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' 1: tabPath = re.sub("\[[0-9]+\]", "", tabPath) 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' 1: f.write("call /kinetics/"+ trimPath(item)+"/notes LOAD \ \n\""+moose.Annotator(info).getField('notes')+"\"\n") 1: 0 0.0 1: 1 1.1 1: 2 2.211 1: 3 3.322 1: 4 4.433 1: 5 5.5440000000000005 1/13 Test #1: test_function .................... Passed 0.26 sec test 2 Start 2: test_kkit 2: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_kkit.py" 2: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 2: Environment variables: 2: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 2: Test timeout computed to be: 1500 2: Script dir /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 2/13 Test #2: test_kkit ........................ Passed 0.24 sec test 3 Start 3: test_ksolve 3: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_ksolve.py" 3: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 3: Environment variables: 3: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 3: Test timeout computed to be: 1500 3: Using moose from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 3: [INFO] Using method = rk5 3: [INFO] Time taken 0.0010333061218261719 3: Test passed 3/13 Test #3: test_ksolve ...................... Passed 0.24 sec test 4 Start 4: test_moose_paths 4: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_moose_paths.py" 4: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 4: Environment variables: 4: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 4: Test timeout computed to be: 1500 4/13 Test #4: test_moose_paths ................. Passed 0.25 sec test 5 Start 5: test_neuroml 5: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_neuroml.py" 5: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 5: Environment variables: 5: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 5: Test timeout computed to be: 1500 5: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? 5: if len(token) is 0: 5: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? 5: elif mechanismname is 'synapse': # synapse being added to the compartment 5: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? 5: elif mechanismname is 'spikegen': # spikegen being added to the compartment 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/cells_channels/CA1soma.morph.xml 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/cells_channels/CA1soma.morph.xml 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/CA1soma.net.xml 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/CA1soma.net.xml 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.networkml: INFO Creating population CA1group of cell type CA1soma 5: moose.nml.networkml: INFO Creating population CA1group of cell type CA1soma 5: moose.nml.networkml: INFO Creating input under /elec 5: moose.nml.networkml: INFO Creating input under /elec 5: For injected current 4e-13, no of spikes in 1.0 second: 10 5: For injected current 8e-13, no of spikes in 1.0 second: 20 5: For injected current 1.4e-12, no of spikes in 1.0 second: 29 5: For injected current 1.8e-12, no of spikes in 1.0 second: 34 5/13 Test #5: test_neuroml ..................... Passed 2.31 sec test 6 Start 6: test_nsdf 6: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_nsdf.py" 6: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 6: Environment variables: 6: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 6: Test timeout computed to be: 1500 6: using moose from: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 6: event input /model[0]/writer[0].eventInput 0 6: 6: /model[0]/writer[0]/eventInput[0] 6: 2024-10-07T17:05:30.827729 6: 2024-10-07T17:05:30.926677 6/13 Test #6: test_nsdf ........................ Passed 0.44 sec test 7 Start 7: test_pymoose 7: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_pymoose.py" 7: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 7: Environment variables: 7: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 7: Test timeout computed to be: 1500 7: ..............................0: Error: SetGet::strGet: Field Vm not found on Element z 7: 0: Error: SetGet::strGet: Field Vm not found on Element z 7: 0: Error: SetGet::strGet: Field Vm not found on Element z 7: .. 7: ---------------------------------------------------------------------- 7: Ran 32 tests in 0.005s 7: 7: OK 7: PyMOOSE Regression Tests: 7: Testing connect ... OK 7: Testing delete ... neutral96467530509705719159306431824420790195 neutral96467530509705719159306431824420790195/b 7: /neutral96467530509705719159306431824420790195[0] /neutral96467530509705719159306431824420790195[0]/b[0] 7: 3 3 7: neutral12134315040524233239717201652785534255 neutral12134315040524233239717201652785534255/b 7: /neutral12134315040524233239717201652785534255[0] /neutral12134315040524233239717201652785534255[0]/b[0] 7: 3 3 7: neutral109322979028850446183707132516084124468 neutral109322979028850446183707132516084124468/b 7: /neutral109322979028850446183707132516084124468[0] /neutral109322979028850446183707132516084124468[0]/b[0] 7: 3 3 7: neutral70979701253540225141730885316138614189 neutral70979701253540225141730885316138614189/b 7: /neutral70979701253540225141730885316138614189[0] /neutral70979701253540225141730885316138614189[0]/b[0] 7: 3 3 7: neutral162289478599443688034291213108491890711 neutral162289478599443688034291213108491890711/b 7: /neutral162289478599443688034291213108491890711[0] /neutral162289478599443688034291213108491890711[0]/b[0] 7: 3 3 7: neutral115802557022272496137562130777010132500 neutral115802557022272496137562130777010132500/b 7: /neutral115802557022272496137562130777010132500[0] /neutral115802557022272496137562130777010132500[0]/b[0] 7: 3 3 7: neutral44432792246215877809143063717865453866 neutral44432792246215877809143063717865453866/b 7: /neutral44432792246215877809143063717865453866[0] /neutral44432792246215877809143063717865453866[0]/b[0] 7: 3 3 7: neutral268958051734081286725252620961967948631 neutral268958051734081286725252620961967948631/b 7: /neutral268958051734081286725252620961967948631[0] /neutral268958051734081286725252620961967948631[0]/b[0] 7: 3 3 7: neutral185723239702732754273521366490598529897 neutral185723239702732754273521366490598529897/b 7: /neutral185723239702732754273521366490598529897[0] /neutral185723239702732754273521366490598529897[0]/b[0] 7: 3 3 7: neutral63599195629183986170536855759656500313 neutral63599195629183986170536855759656500313/b 7: /neutral63599195629183986170536855759656500313[0] /neutral63599195629183986170536855759656500313[0]/b[0] 7: 3 3 7: neutral49306586175928649954542382950231770674 neutral49306586175928649954542382950231770674/b 7: /neutral49306586175928649954542382950231770674[0] /neutral49306586175928649954542382950231770674[0]/b[0] 7: 3 3 7: neutral250229301305072861935017097590320024732 neutral250229301305072861935017097590320024732/b 7: /neutral250229301305072861935017097590320024732[0] /neutral250229301305072861935017097590320024732[0]/b[0] 7: 3 3 7: neutral58957046103456527823391084389944779836 neutral58957046103456527823391084389944779836/b 7: /neutral58957046103456527823391084389944779836[0] /neutral58957046103456527823391084389944779836[0]/b[0] 7: 3 3 7: neutral223478901908831553352648509471890838910 neutral223478901908831553352648509471890838910/b 7: /neutral223478901908831553352648509471890838910[0] /neutral223478901908831553352648509471890838910[0]/b[0] 7: 3 3 7: neutral59612201208018768537957915875757736221 neutral59612201208018768537957915875757736221/b 7: /neutral59612201208018768537957915875757736221[0] /neutral59612201208018768537957915875757736221[0]/b[0] 7: 3 3 7/13 Test #7: test_pymoose ..................... Passed 0.26 sec test 8 Start 8: test_pyrun 8: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_pyrun.py" 8: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 8: Environment variables: 8: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 8: Test timeout computed to be: 1500 8/13 Test #8: test_pyrun ....................... Passed 0.24 sec test 9 Start 9: test_sbml 9: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_sbml.py" 9: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 9: Environment variables: 9: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 9: Test timeout computed to be: 1500 9: line 3: (99507 [Warning]) In situations where a mathematical expression refers to extent, the units of extent should be consistent with the global extent units of the model. In models where the 'extentUnits' attribute has not been declared, libSBML does not yet have the functionality to verify accurately the consistency of the units in such expressions. 9: 9: line 29: (99508 [Warning]) In situations where a mathematical expression refers to a compartment, species or parameter, it is necessary to know the units of the object to establish unit consistency. In models where the units of an object have not been declared, libSBML does not yet have the functionality to accurately verify the consistency of the units in mathematical expressions referring to that object. 9: The units of the 'k1' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate. 9: 9: line 29: (20702 [Warning]) If the attribute 'units' on a given Parameter object has not been set, then the unit of measurement associated with that parameter's value is undefined. 9: Reference: L3V1 Section 4.7.3 9: The with id 'k1' does not have a 'units' attribute. 9: 9: line 39: (99505 [Warning]) In situations where a mathematical expression contains literal numbers or parameters whose units have not been declared, it is not possible to verify accurately the consistency of the units in the expression. 9: The units of the expression 'compartment * k1 * S1' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate. 9: 9: line 29: (80701 [Warning]) As a principle of best modeling practice, the units of a should be declared rather than be left undefined. Doing so improves the ability of software to check the consistency of units and helps make it easier to detect potential errors in models. 9: The with the id 'k1' does not have a 'units' attribute. 9: 9: 9: File: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/./chem_models/00001-sbml-l3v1.xml (Level 3, version 1) 9: model: > 9: functionDefinitions: 0 9: unitDefinitions: 3 9: compartmentTypes: 0 9: specieTypes: 0 9: compartments: 1 9: species: 2 9: parameters: 1 9: initialAssignments: 0 9: rules: 0 9: constraints: 0 9: reactions: 1 9: events: 0 9: 9: 9: Compartment size is 1 9: 9: 9: 9: 9: 9: 9: 9/13 Test #9: test_sbml ........................ Passed 0.26 sec test 10 Start 10: test_snippets 10: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_snippets.py" 10: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 10: Environment variables: 10: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 10: Test timeout computed to be: 1500 10: Testing snippets in /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/../../Demos/snippets 10: [INFO] Disabling all pylab/matplotlib show() functions 10/13 Test #10: test_snippets .................... Passed 0.03 sec test 11 Start 11: test_synchan 11: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_synchan.py" 11: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 11: Environment variables: 11: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 11: Test timeout computed to be: 1500 11: Using moose from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 11: ('Synapses:', 1, 'w=', 1.0) 11/13 Test #11: test_synchan ..................... Passed 0.24 sec test 12 Start 12: test_table_streaming_support 12: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_table_streaming_support.py" 12: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 12: Environment variables: 12: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 12: Test timeout computed to be: 1500 12: @ Mon Oct 7 17:05:32 2024: 10% of total 1000 seconds is over. 12: @ Mon Oct 7 17:05:32 2024: 20% of total 1000 seconds is over. 12: @ Mon Oct 7 17:05:32 2024: 30% of total 1000 seconds is over. 12: @ Mon Oct 7 17:05:32 2024: 40% of total 1000 seconds is over. 12: @ Mon Oct 7 17:05:32 2024: 50% of total 1000 seconds is over. 12: @ Mon Oct 7 17:05:32 2024: 60% of total 1000 seconds is over. 12: @ Mon Oct 7 17:05:32 2024: 70% of total 1000 seconds is over. 12: @ Mon Oct 7 17:05:32 2024: 80% of total 1000 seconds is over. 12: @ Mon Oct 7 17:05:32 2024: 90% of total 1000 seconds is over. 12: @ Mon Oct 7 17:05:32 2024: 100% of total 1000 seconds is over. 12: [INFO] Using moose form /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 12: outfile : _tables/compt/a/tabA.npy useStreamer: True Path: /compt[0]/a[0]/tabA[0] 12: outfile : table2.npy useStreamer: True Path: /compt[0]/b[0]/tabB[0] 12: outfile : tablec.csv useStreamer: True Path: /compt[0]/c[0]/tabC[0] 12: Starting moose for 1000 12: MOOSE is done 12: [(3.27854e-318, 1. ) (1.00000e+000, 0.92331735) 12: (2.00000e+000, 0.84777147) ... (9.98000e+002, 0.31806056) 12: (9.99000e+002, 0.31806056) (1.00000e+003, 0.31806056)] 12: [(3.27854e-318, 2. ) (1.00000e+000, 2.07704612) 12: (2.00000e+000, 2.15294716) ... (9.98000e+002, 2.68506706) 12: (9.99000e+002, 2.68506706) (1.00000e+003, 2.68506706)] 12: [[0.00000000e+00 5.00000000e-01] 12: [1.00000000e+00 5.76988371e-01] 12: [2.00000000e+00 6.52832515e-01] 12: ... 12: [9.98000000e+02 1.18455350e+00] 12: [9.99000000e+02 1.18455350e+00] 12: [1.00000000e+03 1.18455350e+00]] 12: [3.27854e-318 1.00000e+000 2.00000e+000 ... 9.98000e+002 9.99000e+002 12: 1.00000e+003] 12: [3.27854e-318 1.00000e+000 2.00000e+000 ... 9.98000e+002 9.99000e+002 12: 1.00000e+003] 12: [INFO] All tests passed 12/13 Test #12: test_table_streaming_support ..... Passed 0.26 sec test 13 Start 13: test_vec 13: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_vec.py" 13: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 13: Environment variables: 13: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 13: Test timeout computed to be: 1500 13/13 Test #13: test_vec ......................... Passed 0.24 sec The following tests passed: test_function test_kkit test_ksolve test_moose_paths test_neuroml test_nsdf test_pymoose test_pyrun test_sbml test_snippets test_synchan test_table_streaming_support test_vec 100% tests passed, 0 tests failed out of 13 Total Test time (real) = 5.29 sec + popd ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.13/site-packages + /usr/bin/python3 -c 'import moose; element = moose.Neutral("/yyy"); print(element.path)' /yyy[0] + RPM_EC=0 ++ jobs -p + exit 0 Processing files: moose-3.1.5-22.fc42.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.DEV581 + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + DOCDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/README.md /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.T0hcwk + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + LICENSEDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/LICENSE /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + RPM_EC=0 ++ jobs -p + exit 0 Provides: libmoose.so()(64bit) moose = 3.1.5-22.fc42 moose(aarch-64) = 3.1.5-22.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgsl.so.27()(64bit) libgslcblas.so.0()(64bit) libhdf5.so.200()(64bit) libhdf5_hl.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmoose.so()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: python3-moose-3.1.5-22.fc42.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.oEDkXT + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + DOCDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/README.md /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.WWKugp + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + LICENSEDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/LICENSE /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-moose = 3.1.5-22.fc42 python3-moose = 3.1.5-22.fc42 python3-moose(aarch-64) = 3.1.5-22.fc42 python3.13-moose = 3.1.5-22.fc42 python3.13dist(pymoose) = 3.1.5 python3dist(pymoose) = 3.1.5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgsl.so.27()(64bit) libgslcblas.so.0()(64bit) libhdf5.so.200()(64bit) libhdf5_hl.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 python3.13dist(numpy) rtld(GNU_HASH) Processing files: moose-debugsource-3.1.5-22.fc42.aarch64 Provides: moose-debugsource = 3.1.5-22.fc42 moose-debugsource(aarch-64) = 3.1.5-22.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: moose-debuginfo-3.1.5-22.fc42.aarch64 Provides: debuginfo(build-id) = 0d4e0f906cfe326f3a02add08704d6deb52c8f4f debuginfo(build-id) = 186f1f0ddfebdd1a5471c094cefb061a89102ef5 libmoose.so-3.1.5-22.fc42.aarch64.debug()(64bit) moose-debuginfo = 3.1.5-22.fc42 moose-debuginfo(aarch-64) = 3.1.5-22.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: moose-debugsource(aarch-64) = 3.1.5-22.fc42 Processing files: python3-moose-debuginfo-3.1.5-22.fc42.aarch64 Provides: debuginfo(build-id) = 1351a26c780335e1443a19590288e9be1a0c18c1 python-moose-debuginfo = 3.1.5-22.fc42 python3-moose-debuginfo = 3.1.5-22.fc42 python3-moose-debuginfo(aarch-64) = 3.1.5-22.fc42 python3.13-moose-debuginfo = 3.1.5-22.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: moose-debugsource(aarch-64) = 3.1.5-22.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT Wrote: /builddir/build/RPMS/moose-3.1.5-22.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/moose-debugsource-3.1.5-22.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/python3-moose-3.1.5-22.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/python3-moose-debuginfo-3.1.5-22.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/moose-debuginfo-3.1.5-22.fc42.aarch64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.x9qTx7 + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + test -d /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/moose-3.1.5-build + rm -rf /builddir/build/BUILD/moose-3.1.5-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild moose-3.1.5-22.fc42.src.rpm Finish: build phase for moose-3.1.5-22.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1728320330.242712/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/moose-3.1.5-22.fc42.src.rpm) Config(child) 6 minutes 46 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "moose", "epoch": null, "version": "3.1.5", "release": "22.fc42", "arch": "src" }, { "name": "python3-moose-debuginfo", "epoch": null, "version": "3.1.5", "release": "22.fc42", "arch": "aarch64" }, { "name": "moose-debuginfo", "epoch": null, "version": "3.1.5", "release": "22.fc42", "arch": "aarch64" }, { "name": "moose", "epoch": null, "version": "3.1.5", "release": "22.fc42", "arch": "aarch64" }, { "name": "python3-moose", "epoch": null, "version": "3.1.5", "release": "22.fc42", "arch": "aarch64" }, { "name": "moose-debugsource", "epoch": null, "version": "3.1.5", "release": "22.fc42", "arch": "aarch64" } ] } RPMResults finished