Warning: Permanently added '150.239.213.126' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8114967-fedora-rawhide-s390x --chroot fedora-rawhide-s390x Version: 1.0 PID: 37036 Logging PID: 37037 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8114967, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-s390x', 'enable_net': False, 'fedora_review': False, 'git_hash': '11bfa812f9c38c5ebe3bb1f330a3d7daab19a5fa', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/cython-numpy-scipy-rebuild.checker/dolfin', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'dolfin', 'package_version': '2019.1.0.post0-52', 'project_dirname': 'cython-numpy-scipy-rebuild.checker', 'project_name': 'cython-numpy-scipy-rebuild.checker', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/cython-numpy-scipy-rebuild.checker/fedora-rawhide-s390x/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'psimovec/cython-numpy-scipy-rebuild.checker--psimovec', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'psimovec', 'tags': [], 'task_id': '8114967-fedora-rawhide-s390x', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/cython-numpy-scipy-rebuild.checker/dolfin /var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/cython-numpy-scipy-rebuild.checker/dolfin', '/var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin'... Running: git checkout 11bfa812f9c38c5ebe3bb1f330a3d7daab19a5fa -- cmd: ['git', 'checkout', '11bfa812f9c38c5ebe3bb1f330a3d7daab19a5fa', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin rc: 0 stdout: stderr: Note: switching to '11bfa812f9c38c5ebe3bb1f330a3d7daab19a5fa'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 11bfa81 automatic import of dolfin Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading dolfin-2019.1.0.post0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o dolfin-2019.1.0.post0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/cython-numpy-scipy-rebuild.checker/dolfin/dolfin-2019.1.0.post0.tar.gz/md5/79a564ec8f605b8ec434366828e84b60/dolfin-2019.1.0.post0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 10.2M 100 10.2M 0 0 56.4M 0 --:--:-- --:--:-- --:--:-- 56.4M INFO: Reading stdout from command: md5sum dolfin-2019.1.0.post0.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin/dolfin.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728342442.017358 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin/dolfin.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728342442.017358 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin/dolfin.spec) Config(fedora-rawhide-s390x) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1728342442.017358/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-s390x-bootstrap-1728342442.017358/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/dd64505cd7d667b3acb719ba8139c629974817c38abc5f3f39654ec60033321a/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/dd64505cd7d667b3acb719ba8139c629974817c38abc5f3f39654ec60033321a/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-1728342442.017358/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc42.s390x rpm-sequoia-1.7.0-2.fc41.s390x dnf5-5.2.6.2-1.fc42.s390x dnf5-plugins-5.2.6.2-1.fc42.s390x Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 39.4 KiB/s | 5.8 KiB | 00m00s Copr repository 100% | 4.7 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 8.1 MiB/s | 331.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash s390x 5.2.32-2.fc42 fedora 8.3 MiB bzip2 s390x 1.0.8-19.fc41 fedora 99.2 KiB coreutils s390x 9.5-10.fc42 fedora 6.2 MiB cpio s390x 2.15-2.fc41 fedora 1.1 MiB diffutils s390x 3.10-8.fc41 fedora 1.6 MiB fedora-release-common noarch 42-0.3 fedora 19.4 KiB findutils s390x 1:4.10.0-4.fc41 fedora 1.9 MiB gawk s390x 5.3.0-4.fc41 fedora 1.8 MiB glibc-minimal-langpack s390x 2.40.9000-1.fc42 fedora 0.0 B grep s390x 3.11-9.fc41 fedora 1.0 MiB gzip s390x 1.13-2.fc41 fedora 400.8 KiB info s390x 7.1.1-1.fc42 fedora 409.1 KiB patch s390x 2.7.6-25.fc41 fedora 298.3 KiB redhat-rpm-config noarch 296-1.fc42 fedora 186.6 KiB rpm-build s390x 4.19.94-1.fc42 fedora 200.5 KiB sed s390x 4.9-3.fc41 fedora 873.2 KiB shadow-utils s390x 2:4.16.0-4.fc42 fedora 4.1 MiB tar s390x 2:1.35-4.fc41 fedora 3.0 MiB unzip s390x 6.0-64.fc41 fedora 410.0 KiB util-linux s390x 2.40.2-8.fc42 fedora 3.7 MiB which s390x 2.21-42.fc41 fedora 83.9 KiB xz s390x 1:5.6.3-1.fc42 fedora 1.2 MiB Installing dependencies: add-determinism s390x 0.3.6-1.fc41 fedora 3.0 MiB alternatives s390x 1.30-1.fc41 fedora 70.1 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs s390x 4.0.2-1.fc41 fedora 350.9 KiB authselect s390x 1.5.0-7.fc41 fedora 153.3 KiB authselect-libs s390x 1.5.0-7.fc41 fedora 819.6 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils s390x 2.43.1-1.fc42 fedora 26.9 MiB build-reproducibility-srpm-macros noarch 0.3.6-1.fc41 fedora 735.0 B bzip2-libs s390x 1.0.8-19.fc41 fedora 88.5 KiB ca-certificates noarch 2024.2.69_v8.0.401-2.fc42 fedora 2.6 MiB coreutils-common s390x 9.5-10.fc42 fedora 11.2 MiB cracklib s390x 2.9.11-6.fc41 fedora 250.0 KiB crypto-policies noarch 20240927-1.git93b7251.fc42 fedora 136.8 KiB curl s390x 8.10.1-2.fc42 fedora 485.1 KiB cyrus-sasl-lib s390x 2.1.28-27.fc41 fedora 2.4 MiB debugedit s390x 5.0-17.fc41 fedora 202.8 KiB dwz s390x 0.15-7.fc41 fedora 318.6 KiB ed s390x 1.20.2-2.fc41 fedora 150.6 KiB efi-srpm-macros noarch 5-12.fc41 fedora 40.1 KiB elfutils s390x 0.191-8.fc41 fedora 3.0 MiB elfutils-debuginfod-client s390x 0.191-8.fc41 fedora 64.4 KiB elfutils-default-yama-scope noarch 0.191-8.fc41 fedora 1.8 KiB elfutils-libelf s390x 0.191-8.fc41 fedora 1.2 MiB elfutils-libs s390x 0.191-8.fc41 fedora 746.0 KiB fedora-gpg-keys noarch 42-0.2 fedora 126.4 KiB fedora-release noarch 42-0.3 fedora 0.0 B fedora-release-identity-basic noarch 42-0.3 fedora 694.0 B fedora-repos noarch 42-0.2 fedora 4.9 KiB fedora-repos-rawhide noarch 42-0.2 fedora 2.2 KiB file s390x 5.45-7.fc41 fedora 103.3 KiB file-libs s390x 5.45-7.fc41 fedora 9.9 MiB filesystem s390x 3.18-29.fc42 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-1.fc42 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal s390x 15.1-2.fc42 fedora 15.0 MiB gdbm s390x 1:1.23-7.fc41 fedora 483.9 KiB gdbm-libs s390x 1:1.23-7.fc41 fedora 133.4 KiB ghc-srpm-macros noarch 1.9.2-1.fc42 fedora 779.0 B glibc s390x 2.40.9000-1.fc42 fedora 5.3 MiB glibc-common s390x 2.40.9000-1.fc42 fedora 1.1 MiB glibc-gconv-extra s390x 2.40.9000-1.fc42 fedora 7.9 MiB gmp s390x 1:6.3.0-2.fc41 fedora 770.0 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB jansson s390x 2.13.1-10.fc41 fedora 92.1 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs s390x 1.6.3-4.fc41 fedora 54.2 KiB krb5-libs s390x 1.21.3-2.fc41 fedora 2.4 MiB libacl s390x 2.3.2-2.fc41 fedora 43.8 KiB libarchive s390x 3.7.6-1.fc42 fedora 1.0 MiB libattr s390x 2.5.2-4.fc41 fedora 28.3 KiB libblkid s390x 2.40.2-8.fc42 fedora 286.4 KiB libbrotli s390x 1.1.0-5.fc41 fedora 925.1 KiB libcap s390x 2.70-4.fc41 fedora 234.2 KiB libcap-ng s390x 0.8.5-3.fc41 fedora 76.7 KiB libcom_err s390x 1.47.1-3.fc41 fedora 67.0 KiB libcurl s390x 8.10.1-2.fc42 fedora 890.1 KiB libeconf s390x 0.6.2-3.fc41 fedora 61.8 KiB libevent s390x 2.1.12-14.fc41 fedora 938.8 KiB libfdisk s390x 2.40.2-8.fc42 fedora 394.8 KiB libffi s390x 3.4.6-3.fc42 fedora 65.9 KiB libgcc s390x 14.2.1-4.fc42 fedora 177.2 KiB libgomp s390x 14.2.1-4.fc42 fedora 531.2 KiB libidn2 s390x 2.3.7-2.fc41 fedora 328.9 KiB libmount s390x 2.40.2-8.fc42 fedora 375.8 KiB libnghttp2 s390x 1.63.0-1.fc42 fedora 177.9 KiB libnsl2 s390x 2.0.1-2.fc41 fedora 61.7 KiB libpkgconf s390x 2.3.0-1.fc42 fedora 85.9 KiB libpsl s390x 0.21.5-4.fc41 fedora 80.3 KiB libpwquality s390x 1.4.5-11.fc41 fedora 420.9 KiB libselinux s390x 3.7-6.fc42 fedora 192.9 KiB libsemanage s390x 3.7-3.fc42 fedora 305.4 KiB libsepol s390x 3.7-3.fc42 fedora 849.8 KiB libsmartcols s390x 2.40.2-8.fc42 fedora 192.2 KiB libssh s390x 0.11.1-1.fc42 fedora 585.3 KiB libssh-config noarch 0.11.1-1.fc42 fedora 277.0 B libstdc++ s390x 14.2.1-4.fc42 fedora 3.1 MiB libtasn1 s390x 4.19.0-9.fc41 fedora 187.5 KiB libtirpc s390x 1.3.5-0.fc41 fedora 218.5 KiB libtool-ltdl s390x 2.4.7-12.fc41 fedora 74.0 KiB libunistring s390x 1.1-8.fc41 fedora 1.8 MiB libuuid s390x 2.40.2-8.fc42 fedora 41.2 KiB libverto s390x 0.3.2-9.fc41 fedora 29.3 KiB libxcrypt s390x 4.4.36-7.fc41 fedora 274.7 KiB libxml2 s390x 2.12.8-2.fc41 fedora 1.9 MiB libzstd s390x 1.5.6-2.fc41 fedora 875.7 KiB lua-libs s390x 5.4.6-6.fc41 fedora 320.9 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs s390x 1.10.0-1.fc41 fedora 201.3 KiB mpfr s390x 4.2.1-5.fc41 fedora 698.7 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs s390x 6.5-2.20240629.fc41 fedora 1.1 MiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap s390x 2.6.8-5.fc41 fedora 683.6 KiB openssl-libs s390x 1:3.2.2-8.fc42 fedora 6.1 MiB p11-kit s390x 0.25.5-3.fc41 fedora 2.5 MiB p11-kit-trust s390x 0.25.5-3.fc41 fedora 475.2 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam s390x 1.6.1-6.fc42 fedora 1.8 MiB pam-libs s390x 1.6.1-6.fc42 fedora 138.4 KiB pcre2 s390x 10.44-1.fc41.1 fedora 684.9 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf s390x 2.3.0-1.fc42 fedora 92.4 KiB pkgconf-m4 noarch 2.3.0-1.fc42 fedora 14.4 KiB pkgconf-pkg-config s390x 2.3.0-1.fc42 fedora 988.0 B popt s390x 1.19-7.fc41 fedora 144.7 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.15.1-1.fc42 fedora 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 fedora 500.0 B qt6-srpm-macros noarch 6.7.2-3.fc41 fedora 456.0 B readline s390x 8.2-11.fc42 fedora 556.8 KiB rpm s390x 4.19.94-1.fc42 fedora 3.1 MiB rpm-build-libs s390x 4.19.94-1.fc42 fedora 218.4 KiB rpm-libs s390x 4.19.94-1.fc42 fedora 813.6 KiB rpm-sequoia s390x 1.7.0-2.fc41 fedora 3.2 MiB rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs s390x 3.46.0-4.fc41 fedora 1.6 MiB systemd-libs s390x 256.5-1.fc42 fedora 2.1 MiB util-linux-core s390x 2.40.2-8.fc42 fedora 1.5 MiB xxhash-libs s390x 0.8.2-4.fc42 fedora 68.0 KiB xz-libs s390x 1:5.6.3-1.fc42 fedora 226.1 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip s390x 3.0-41.fc41 fedora 750.2 KiB zlib-ng-compat s390x 2.1.7-3.fc42 fedora 117.3 KiB zstd s390x 1.5.6-2.fc41 fedora 1.8 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 54 MiB. Need to download 0 B. After this operation, 184 MiB extra will be used (install 184 MiB, remove 0 B). [1/1] tar-2:1.35-4.fc41.s390x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/2] bzip2-0:1.0.8-19.fc41.s390x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/3] redhat-rpm-config-0:296-1.fc42.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [3/3] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/4] rpm-build-0:4.19.94-1.fc42.s390x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [4/4] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/5] unzip-0:6.0-64.fc41.s390x 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded 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downloaded -------------------------------------------------------------------------------- [153/153] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction Importing PGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing PGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing PGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing PGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. [ 1/155] Verify package files 100% | 784.0 B/s | 153.0 B | 00m00s [ 2/155] Prepare transaction 100% | 2.9 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:14.2.1-4. 100% | 174.7 MiB/s | 178.9 KiB | 00m00s [ 4/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/155] Installing publicsuffix-list- 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 6/155] Installing fedora-release-ide 100% | 0.0 B/s | 952.0 B | 00m00s [ 7/155] Installing fedora-gpg-keys-0: 100% | 42.0 MiB/s | 172.2 KiB | 00m00s [ 8/155] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 9/155] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/155] Installing fedora-release-com 100% | 23.1 MiB/s | 23.7 KiB | 00m00s [ 11/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/155] Installing setup-0:2.15.0-5.f 100% | 50.6 MiB/s | 726.1 KiB | 00m00s [ 13/155] Installing filesystem-0:3.18- 100% | 2.9 MiB/s | 212.6 KiB | 00m00s [ 14/155] Installing 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warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 19/155] Installing glibc-0:2.40.9000- 100% | 195.2 MiB/s | 5.3 MiB | 00m00s [ 20/155] Installing bash-0:5.2.32-2.fc 100% | 321.6 MiB/s | 8.4 MiB | 00m00s [ 21/155] Installing glibc-common-0:2.4 100% | 160.3 MiB/s | 1.1 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 22/155] Installing glibc-gconv-extra- 100% | 242.1 MiB/s | 8.0 MiB | 00m00s [ 23/155] Installing zlib-ng-compat-0:2 100% | 115.4 MiB/s | 118.2 KiB | 00m00s [ 24/155] Installing bzip2-libs-0:1.0.8 100% | 0.0 B/s | 89.6 KiB | 00m00s [ 25/155] Installing 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[114/155] Installing libnsl2-0:2.0.1-2. 100% | 61.4 MiB/s | 62.8 KiB | 00m00s [115/155] Installing pam-0:1.6.1-6.fc42 100% | 170.4 MiB/s | 1.9 MiB | 00m00s [116/155] Installing libssh-0:0.11.1-1. 100% | 286.8 MiB/s | 587.4 KiB | 00m00s [117/155] Installing rpm-sequoia-0:1.7. 100% | 289.1 MiB/s | 3.2 MiB | 00m00s [118/155] Installing rpm-libs-0:4.19.94 100% | 265.3 MiB/s | 815.1 KiB | 00m00s [119/155] Installing rpm-build-libs-0:4 100% | 214.1 MiB/s | 219.3 KiB | 00m00s [120/155] Installing libevent-0:2.1.12- 100% | 306.8 MiB/s | 942.6 KiB | 00m00s [121/155] Installing openldap-0:2.6.8-5 100% | 223.8 MiB/s | 687.4 KiB | 00m00s [122/155] Installing libcurl-0:8.10.1-2 100% | 217.6 MiB/s | 891.2 KiB | 00m00s [123/155] Installing elfutils-debuginfo 100% | 64.7 MiB/s | 66.3 KiB | 00m00s [124/155] Installing binutils-0:2.43.1- 100% | 327.9 MiB/s | 26.9 MiB | 00m00s [125/155] Installing elfutils-0:0.191-8 100% | 296.7 MiB/s | 3.0 MiB | 00m00s [126/155] Installing gdb-minimal-0:15.1 100% | 311.6 MiB/s | 15.0 MiB | 00m00s [127/155] Installing debugedit-0:5.0-17 100% | 200.7 MiB/s | 205.5 KiB | 00m00s [128/155] Installing curl-0:8.10.1-2.fc 100% | 59.5 MiB/s | 487.6 KiB | 00m00s [129/155] Installing rpm-0:4.19.94-1.fc 100% | 167.0 MiB/s | 2.5 MiB | 00m00s [130/155] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [131/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [132/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [133/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [134/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [135/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [136/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [137/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [138/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [139/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [140/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [141/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [142/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [143/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [144/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [145/155] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [146/155] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [147/155] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 62.0 KiB | 00m00s [148/155] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [149/155] Installing redhat-rpm-config- 100% | 94.4 MiB/s | 193.2 KiB | 00m00s [150/155] Installing rpm-build-0:4.19.9 100% | 102.1 MiB/s | 209.1 KiB | 00m00s [151/155] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [152/155] Installing util-linux-0:2.40. 100% | 177.6 MiB/s | 3.7 MiB | 00m00s [153/155] Installing authselect-0:1.5.0 100% | 77.0 MiB/s | 157.7 KiB | 00m00s [154/155] Installing which-0:2.21-42.fc 100% | 84.1 MiB/s | 86.1 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [155/155] Installing info-0:7.1.1-1.fc4 100% | 236.6 KiB/s | 409.5 KiB | 00m02s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-1.fc41.s390x alternatives-1.30-1.fc41.s390x ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.s390x authselect-1.5.0-7.fc41.s390x authselect-libs-1.5.0-7.fc41.s390x basesystem-11-21.fc41.noarch bash-5.2.32-2.fc42.s390x binutils-2.43.1-1.fc42.s390x build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch bzip2-1.0.8-19.fc41.s390x bzip2-libs-1.0.8-19.fc41.s390x ca-certificates-2024.2.69_v8.0.401-2.fc42.noarch coreutils-9.5-10.fc42.s390x coreutils-common-9.5-10.fc42.s390x cpio-2.15-2.fc41.s390x cracklib-2.9.11-6.fc41.s390x crypto-policies-20240927-1.git93b7251.fc42.noarch curl-8.10.1-2.fc42.s390x cyrus-sasl-lib-2.1.28-27.fc41.s390x debugedit-5.0-17.fc41.s390x diffutils-3.10-8.fc41.s390x dwz-0.15-7.fc41.s390x ed-1.20.2-2.fc41.s390x efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.s390x elfutils-debuginfod-client-0.191-8.fc41.s390x elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.s390x elfutils-libs-0.191-8.fc41.s390x fedora-gpg-keys-42-0.2.noarch fedora-release-42-0.3.noarch fedora-release-common-42-0.3.noarch fedora-release-identity-basic-42-0.3.noarch fedora-repos-42-0.2.noarch fedora-repos-rawhide-42-0.2.noarch file-5.45-7.fc41.s390x file-libs-5.45-7.fc41.s390x filesystem-3.18-29.fc42.s390x findutils-4.10.0-4.fc41.s390x fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.s390x gdb-minimal-15.1-2.fc42.s390x gdbm-1.23-7.fc41.s390x gdbm-libs-1.23-7.fc41.s390x ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-1.fc42.s390x glibc-common-2.40.9000-1.fc42.s390x glibc-gconv-extra-2.40.9000-1.fc42.s390x glibc-minimal-langpack-2.40.9000-1.fc42.s390x gmp-6.3.0-2.fc41.s390x gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-105ef944-65ca83d1 gpg-pubkey-31645531-66b6dccf gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.s390x gzip-1.13-2.fc41.s390x info-7.1.1-1.fc42.s390x jansson-2.13.1-10.fc41.s390x kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.s390x krb5-libs-1.21.3-2.fc41.s390x libacl-2.3.2-2.fc41.s390x libarchive-3.7.6-1.fc42.s390x libattr-2.5.2-4.fc41.s390x libblkid-2.40.2-8.fc42.s390x libbrotli-1.1.0-5.fc41.s390x libcap-2.70-4.fc41.s390x libcap-ng-0.8.5-3.fc41.s390x libcom_err-1.47.1-3.fc41.s390x libcurl-8.10.1-2.fc42.s390x libeconf-0.6.2-3.fc41.s390x libevent-2.1.12-14.fc41.s390x libfdisk-2.40.2-8.fc42.s390x libffi-3.4.6-3.fc42.s390x libgcc-14.2.1-4.fc42.s390x libgomp-14.2.1-4.fc42.s390x libidn2-2.3.7-2.fc41.s390x libmount-2.40.2-8.fc42.s390x libnghttp2-1.63.0-1.fc42.s390x libnsl2-2.0.1-2.fc41.s390x libpkgconf-2.3.0-1.fc42.s390x libpsl-0.21.5-4.fc41.s390x libpwquality-1.4.5-11.fc41.s390x libselinux-3.7-6.fc42.s390x libsemanage-3.7-3.fc42.s390x libsepol-3.7-3.fc42.s390x libsmartcols-2.40.2-8.fc42.s390x libssh-0.11.1-1.fc42.s390x libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-4.fc42.s390x libtasn1-4.19.0-9.fc41.s390x libtirpc-1.3.5-0.fc41.s390x libtool-ltdl-2.4.7-12.fc41.s390x libunistring-1.1-8.fc41.s390x libuuid-2.40.2-8.fc42.s390x libverto-0.3.2-9.fc41.s390x libxcrypt-4.4.36-7.fc41.s390x libxml2-2.12.8-2.fc41.s390x libzstd-1.5.6-2.fc41.s390x lua-libs-5.4.6-6.fc41.s390x lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.s390x mpfr-4.2.1-5.fc41.s390x ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.s390x ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.s390x openssl-libs-3.2.2-8.fc42.s390x p11-kit-0.25.5-3.fc41.s390x p11-kit-trust-0.25.5-3.fc41.s390x package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-6.fc42.s390x pam-libs-1.6.1-6.fc42.s390x patch-2.7.6-25.fc41.s390x pcre2-10.44-1.fc41.1.s390x pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.s390x pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.s390x popt-1.19-7.fc41.s390x publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.15.1-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-11.fc42.s390x redhat-rpm-config-296-1.fc42.noarch rpm-4.19.94-1.fc42.s390x rpm-build-4.19.94-1.fc42.s390x rpm-build-libs-4.19.94-1.fc42.s390x rpm-libs-4.19.94-1.fc42.s390x rpm-sequoia-1.7.0-2.fc41.s390x rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.s390x setup-2.15.0-5.fc41.noarch shadow-utils-4.16.0-4.fc42.s390x sqlite-libs-3.46.0-4.fc41.s390x systemd-libs-256.5-1.fc42.s390x tar-1.35-4.fc41.s390x unzip-6.0-64.fc41.s390x util-linux-2.40.2-8.fc42.s390x util-linux-core-2.40.2-8.fc42.s390x which-2.21-42.fc41.s390x xxhash-libs-0.8.2-4.fc42.s390x xz-5.6.3-1.fc42.s390x xz-libs-5.6.3-1.fc42.s390x zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.s390x zlib-ng-compat-2.1.7-3.fc42.s390x zstd-1.5.6-2.fc41.s390x Start: buildsrpm Start: rpmbuild -bs Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1721174400 Wrote: /builddir/build/SRPMS/dolfin-2019.1.0.post0-52.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-s390x-1728342442.017358/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-pr4z781a/dolfin/dolfin.spec) Config(child) 0 minutes 25 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/dolfin-2019.1.0.post0-52.fc42.src.rpm) Config(fedora-rawhide-s390x) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1728342442.017358/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1728342442.017358/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-1728342442.017358/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc42.s390x rpm-sequoia-1.7.0-2.fc41.s390x dnf5-5.2.6.2-1.fc42.s390x dnf5-plugins-5.2.6.2-1.fc42.s390x Finish: chroot init Start: build phase for dolfin-2019.1.0.post0-52.fc42.src.rpm Start: build setup for dolfin-2019.1.0.post0-52.fc42.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1721174400 Wrote: /builddir/build/SRPMS/dolfin-2019.1.0.post0-52.fc42.src.rpm Updating and loading repositories: fedora 100% | 205.5 KiB/s | 5.8 KiB | 00m00s Copr repository 100% | 5.0 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "pkgconf-2.3.0-1.fc42.s390x" is already installed. Package Arch Version Repository Size Installing: boost-devel s390x 1.83.0-8.fc41 fedora 143.0 MiB chrpath s390x 0.16-24.fc41 fedora 54.3 KiB cmake s390x 3.28.3-7.fc41 fedora 31.2 MiB eigen3-devel noarch 3.4.0-16.fc41 fedora 8.4 MiB flexiblas-devel s390x 3.4.4-3.fc41 fedora 4.8 MiB gcc-c++ s390x 14.2.1-4.fc42 fedora 28.7 MiB gnupg2 s390x 2.4.5-3.fc41 fedora 9.9 MiB hdf5-devel s390x 1.12.1-20.fc41 fedora 3.8 MiB make s390x 1:4.4.1-9.fc42 fedora 1.9 MiB petsc-devel s390x 3.20.6-12.fc42 fedora 5.1 MiB pybind11-devel s390x 2.13.1-3.fc42 copr_base 846.0 KiB python3-devel s390x 3.13.0~rc3-1.fc42 fedora 1.8 MiB python3-dijitso noarch 2019.1.0-20.fc42 copr_base 272.3 KiB python3-ffc noarch 2019.1.0.post0-22.fc42 copr_base 3.1 MiB python3-numpy s390x 1:1.26.4-8.fc41 fedora 41.8 MiB python3-setuptools noarch 69.2.0-8.fc41 fedora 7.2 MiB python3-ufl noarch 2019.1.0-22.fc41 fedora 2.1 MiB scotch-devel s390x 7.0.5-1.fc42 fedora 65.2 KiB sundials-devel s390x 6.7.0-4.fc41 fedora 11.4 MiB zlib-ng-compat-devel s390x 2.1.7-3.fc42 fedora 106.8 KiB Installing dependencies: Lmod s390x 8.7.49-1.fc42 fedora 1.3 MiB SuperLU s390x 7.0.0-1.fc42 fedora 590.1 KiB SuperLUMT-common noarch 4.0.1-3.fc41 fedora 679.2 KiB SuperLUMT64-double s390x 4.0.1-3.fc41 fedora 201.2 KiB annobin-docs noarch 12.70-1.fc42 fedora 97.7 KiB annobin-plugin-gcc s390x 12.70-1.fc42 fedora 985.3 KiB boost s390x 1.83.0-8.fc41 fedora 1.3 KiB boost-atomic s390x 1.83.0-8.fc41 fedora 20.7 KiB boost-chrono s390x 1.83.0-8.fc41 fedora 41.2 KiB boost-container s390x 1.83.0-8.fc41 fedora 69.2 KiB boost-context s390x 1.83.0-8.fc41 fedora 16.3 KiB boost-contract s390x 1.83.0-8.fc41 fedora 106.4 KiB boost-coroutine s390x 1.83.0-8.fc41 fedora 20.9 KiB boost-date-time s390x 1.83.0-8.fc41 fedora 16.1 KiB boost-fiber s390x 1.83.0-8.fc41 fedora 86.1 KiB boost-filesystem s390x 1.83.0-8.fc41 fedora 150.7 KiB boost-graph s390x 1.83.0-8.fc41 fedora 369.2 KiB boost-iostreams s390x 1.83.0-8.fc41 fedora 94.0 KiB boost-json s390x 1.83.0-8.fc41 fedora 363.9 KiB boost-locale s390x 1.83.0-8.fc41 fedora 631.1 KiB boost-log s390x 1.83.0-8.fc41 fedora 1.5 MiB boost-math s390x 1.83.0-8.fc41 fedora 713.5 KiB boost-nowide s390x 1.83.0-8.fc41 fedora 24.7 KiB boost-numpy3 s390x 1.83.0-8.fc41 fedora 57.2 KiB boost-program-options s390x 1.83.0-8.fc41 fedora 291.3 KiB boost-python3 s390x 1.83.0-8.fc41 fedora 256.3 KiB boost-random s390x 1.83.0-8.fc41 fedora 33.4 KiB boost-regex s390x 1.83.0-8.fc41 fedora 302.0 KiB boost-serialization s390x 1.83.0-8.fc41 fedora 474.8 KiB boost-stacktrace s390x 1.83.0-8.fc41 fedora 63.2 KiB boost-system s390x 1.83.0-8.fc41 fedora 16.1 KiB boost-test s390x 1.83.0-8.fc41 fedora 675.8 KiB boost-thread s390x 1.83.0-8.fc41 fedora 140.1 KiB boost-timer s390x 1.83.0-8.fc41 fedora 24.8 KiB boost-type_erasure s390x 1.83.0-8.fc41 fedora 61.8 KiB boost-wave s390x 1.83.0-8.fc41 fedora 689.9 KiB cmake-data noarch 3.28.3-7.fc41 fedora 8.0 MiB cmake-filesystem s390x 3.28.3-7.fc41 fedora 0.0 B cmake-rpm-macros noarch 3.28.3-7.fc41 fedora 7.5 KiB cpp s390x 14.2.1-4.fc42 fedora 25.5 MiB emacs-filesystem noarch 1:30.0-3.fc41 fedora 0.0 B expat s390x 2.6.3-1.fc42 fedora 319.1 KiB flexiblas s390x 3.4.4-3.fc41 fedora 48.5 KiB flexiblas-netlib s390x 3.4.4-3.fc41 fedora 12.4 MiB flexiblas-netlib64 s390x 3.4.4-3.fc41 fedora 12.4 MiB flexiblas-openblas-openmp s390x 3.4.4-3.fc41 fedora 43.1 KiB flexiblas-openblas-openmp64 s390x 3.4.4-3.fc41 fedora 43.2 KiB gcc s390x 14.2.1-4.fc42 fedora 76.7 MiB gcc-gfortran s390x 14.2.1-4.fc42 fedora 27.4 MiB gcc-plugin-annobin s390x 14.2.1-4.fc42 fedora 60.8 KiB glibc-devel s390x 2.40.9000-1.fc42 fedora 467.6 KiB glibc-headers-s390 noarch 2.40.9000-1.fc42 fedora 2.2 MiB gnutls s390x 3.8.7-4.fc42 fedora 3.2 MiB hdf5 s390x 1.12.1-20.fc41 fedora 9.1 MiB hwloc-libs s390x 2.11.2-1.fc42 fedora 2.9 MiB json-c s390x 0.17-4.fc41 fedora 86.2 KiB jsoncpp s390x 1.9.5-8.fc41 fedora 247.5 KiB kernel-headers s390x 6.11.0-63.fc42 fedora 6.4 MiB libX11 s390x 1.8.10-2.fc42 fedora 1.4 MiB libX11-common noarch 1.8.10-2.fc42 fedora 1.1 MiB libXau s390x 1.0.11-7.fc41 fedora 66.6 KiB libaec s390x 1.1.3-1.fc42 fedora 117.7 KiB libaec-devel s390x 1.1.3-1.fc42 fedora 12.5 KiB libasan s390x 14.2.1-4.fc42 fedora 1.6 MiB libassuan s390x 2.5.7-2.fc41 fedora 171.6 KiB libatomic s390x 14.2.1-4.fc42 fedora 32.3 KiB libb2 s390x 0.98.1-12.fc41 fedora 42.0 KiB libfabric s390x 1.22.0-1.fc41 fedora 1.7 MiB libgcrypt s390x 1.11.0-3.fc41 fedora 1.2 MiB libgfortran s390x 14.2.1-4.fc42 fedora 2.2 MiB libgpg-error s390x 1.50-2.fc41 fedora 905.1 KiB libibverbs s390x 51.0-4.fc41 fedora 1.2 MiB libicu s390x 74.2-2.fc41 fedora 35.3 MiB libicu-devel s390x 74.2-2.fc41 fedora 5.6 MiB libksba s390x 1.6.7-2.fc41 fedora 418.4 KiB libmpc s390x 1.3.1-6.fc41 fedora 164.5 KiB libnl3 s390x 3.10.0-1.fc41 fedora 1.1 MiB librdmacm s390x 51.0-4.fc41 fedora 149.7 KiB libstdc++-devel s390x 14.2.1-4.fc42 fedora 15.1 MiB libubsan s390x 14.2.1-4.fc42 fedora 491.2 KiB libuv s390x 1:1.49.0-1.fc42 fedora 571.1 KiB libxcb s390x 1.17.0-3.fc42 fedora 1.2 MiB libxcrypt-devel s390x 4.4.36-7.fc41 fedora 30.3 KiB lua s390x 5.4.6-6.fc41 fedora 625.3 KiB lua-filesystem s390x 1.8.0-12.fc41 fedora 64.6 KiB lua-json noarch 1.3.4-8.fc41 fedora 59.4 KiB lua-lpeg s390x 1.1.0-4.fc42 fedora 185.1 KiB lua-posix s390x 36.2.1-7.fc41 fedora 613.8 KiB lua-term s390x 0.08-4.fc41 fedora 26.6 KiB metis s390x 5.1.0.3-6.fc41 fedora 1.1 MiB mpdecimal s390x 2.5.1-16.fc41 fedora 224.7 KiB mpi4py-common noarch 4.0.0-1.fc42 copr_base 26.7 KiB mpich s390x 4.2.2-1.fc42 fedora 7.2 MiB nettle s390x 3.10-3.fc41 fedora 849.2 KiB npth s390x 1.7-2.fc41 fedora 49.3 KiB openblas s390x 0.3.26-5.fc41 fedora 96.0 KiB openblas-openmp s390x 0.3.26-5.fc41 fedora 15.2 MiB openblas-openmp64 s390x 0.3.26-5.fc41 fedora 15.2 MiB openblas-serial s390x 0.3.26-5.fc41 fedora 14.1 MiB petsc s390x 3.20.6-12.fc42 fedora 21.3 MiB procps-ng s390x 4.0.4-4.fc41 fedora 1.1 MiB pyproject-rpm-macros noarch 1.15.1-1.fc42 fedora 109.2 KiB python-pip-wheel noarch 24.2-2.fc42 fedora 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 fedora 22.1 KiB python3 s390x 3.13.0~rc3-1.fc42 fedora 31.6 KiB python3-fiat noarch 2019.1.0-22.fc42 copr_base 842.7 KiB python3-libs s390x 3.13.0~rc3-1.fc42 fedora 40.8 MiB python3-mpi4py-mpich s390x 4.0.0-1.fc42 copr_base 3.9 MiB python3-mpich s390x 4.2.2-1.fc42 fedora 99.0 B python3-mpmath noarch 1.3.0-10.fc41 fedora 5.2 MiB python3-packaging noarch 24.1-2.fc41 fedora 422.3 KiB python3-rpm-generators noarch 14-11.fc41 fedora 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 fedora 6.4 KiB python3-sympy s390x 1.13.3-1.fc42 fedora 78.3 MiB rhash s390x 1.4.4-2.fc41 fedora 357.6 KiB scotch s390x 7.0.5-1.fc42 fedora 906.2 KiB suitesparse64 s390x 7.7.0-2.fc41 fedora 178.7 MiB sundials s390x 6.7.0-4.fc41 fedora 7.4 MiB tcl s390x 1:8.6.14-2.fc41 fedora 4.4 MiB tpm2-tss s390x 4.1.3-3.fc41 fedora 1.6 MiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB vim-filesystem noarch 2:9.1.737-1.fc42 fedora 40.0 B yaksa s390x 0.3-6.fc41 fedora 77.7 MiB Transaction Summary: Installing: 143 packages Total size of inbound packages is 254 MiB. Need to download 74 MiB. After this operation, 1 GiB extra will be used (install 1 GiB, remove 0 B). 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MiB/s | 11.4 MiB | 00m00s [143/145] Installing flexiblas-devel-0: 100% | 264.6 MiB/s | 4.8 MiB | 00m00s [144/145] Installing eigen3-devel-0:3.4 100% | 151.2 MiB/s | 8.5 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [145/145] Installing chrpath-0:0.16-24. 100% | 283.3 KiB/s | 56.1 KiB | 00m00s Warning: skipped PGP checks for 6 packages from repository: copr_base Complete! Finish: build setup for dolfin-2019.1.0.post0-52.fc42.src.rpm Start: rpmbuild dolfin-2019.1.0.post0-52.fc42.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1721174400 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.zsMoOj + umask 022 + cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build + test -d /builddir/build/BUILD/dolfin-2019.1.0.post0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/dolfin-2019.1.0.post0-build + /usr/bin/rm -rf /builddir/build/BUILD/dolfin-2019.1.0.post0-build + /usr/bin/mkdir -p /builddir/build/BUILD/dolfin-2019.1.0.post0-build + /usr/bin/mkdir -p /builddir/build/BUILD/dolfin-2019.1.0.post0-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.bAteDi + umask 022 + cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build + /usr/lib/rpm/redhat/gpgverify --keyring=/builddir/build/SOURCES/3083BE4C722232E28AD0828CBED06106DD22BAB3.gpg --signature=/builddir/build/SOURCES/dolfin-2019.1.0.post0.tar.gz.asc --data=/builddir/build/SOURCES/dolfin-2019.1.0.post0.tar.gz gpgv: Signature made Fri Apr 26 07:47:43 2019 UTC gpgv: using RSA key 3083BE4C722232E28AD0828CBED06106DD22BAB3 gpgv: Good signature from "FEniCS Project Steering Council " + cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build + rm -rf dolfin-2019.1.0.post0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/dolfin-2019.1.0.post0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd dolfin-2019.1.0.post0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-pkgconfig-drop-irrelevant-part-from-Libs-and-Cflags.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-Add-missing-include-for-compatiblity-with-gcc-13.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + sed -i -r 's|pybind11==|pybind11>=|' python/setup.py + rm cmake/modules/FindBLAS.cmake + cat + sed -r -i 's/#include \n\0/' dolfin/geometry/IntersectionConstruction.cpp dolfin/mesh/MeshFunction.h + sed -r -i 's|boost/detail/endian.hpp|boost/endian/arithmetic.hpp|' dolfin/io/VTKFile.cpp dolfin/io/VTKWriter.cpp + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.EI4KQo + umask 022 + cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd dolfin-2019.1.0.post0 + mkdir -p build + cd build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-unused-variable -DH5_USE_110_API' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-unused-variable -DH5_USE_110_API' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON .. -DBLA_VENDOR=FlexiBLAS -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=off -Wno-dev -- The C compiler identification is GNU 14.2.1 -- The CXX compiler identification is GNU 14.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Could NOT find MPI_C (missing: MPI_C_LIBRARIES MPI_C_INCLUDE_PATH) -- Could NOT find MPI_CXX (missing: MPI_CXX_LIBRARIES MPI_CXX_INCLUDE_PATH) -- Found Boost: /usr/include (found version "1.83.0") found components: timer filesystem program_options iostreams regex -- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.2.90") -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13", minimum required is "3") -- Found UFC: /usr/lib/python3.13/site-packages/ffc/backends/ufc (Required is at least version "2019.1") -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Checking for one of the modules 'craypetsc_real;PETSc' -- Test PETSC_TEST_RUNS with shared library linking - Success -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of PetscInt -- Check size of PetscInt - done -- Found PETSc: TRUE (found suitable version "3.20.6", minimum required is "3.7") -- Checking for one of the modules 'crayslepc_real;SLEPc' -- SLEPc could not be found. Be sure to set SLEPC_DIR. (missing: SLEPC_FOUND) (Required is at least version "3.7") -- Checking for package 'AMD' -- Checking for package 'UMFPACK' -- Checking for package 'AMD' -- Checking for package 'CHOLMOD' -- Checking for package 'AMD' -- Found BLAS: /usr/lib64/libflexiblas.so -- UMFPACK could not be found. Be sure to set UMFPACK_DIR. (missing: UMFPACK_INCLUDE_DIRS AMD_LIBRARIES UMFPACK_TEST_RUNS) -- Checking for package 'CHOLMOD' -- Checking for package 'AMD' -- CHOLMOD could not be found. Be sure to set CHOLMOD_DIR. (missing: CHOLMOD_INCLUDE_DIRS CHOLMOD_TEST_RUNS) -- Found HDF5: /lib64/libhdf5.so (found version "1.12.1") found components: C -- Checking for Trilinos -- Unable to find Trilinos (>= 12.4.0) -- Trilinos could not be found -- Found ZLIB: /lib64/libz.so (found version "1.3.1") -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFIN with shared libraries. * DOLFIN_AUTO_DETECT_MPI, Detect MPI automatically (turn this off to use the MPI compiler wrappers directly via setting CXX, CXX, FC). * DOLFIN_WITH_LIBRARY_VERSION, Build with library version information. * DOLFIN_ENABLE_DOCS, Enable generation of documentation. * DOLFIN_ENABLE_MPI, Compile with support for MPI. * DOLFIN_ENABLE_PETSC, Compile with support for PETSc. * DOLFIN_ENABLE_SLEPC, Compile with support for SLEPc. * DOLFIN_ENABLE_TRILINOS, Compile with support for Trilinos. * DOLFIN_ENABLE_UMFPACK, Compile with support for UMFPACK. * DOLFIN_ENABLE_CHOLMOD, Compile with support for CHOLMOD. * DOLFIN_ENABLE_SCOTCH, Compile with support for SCOTCH. * DOLFIN_ENABLE_PARMETIS, Compile with support for ParMETIS. * DOLFIN_ENABLE_SUNDIALS, Compile with support for SUNDIALS. * DOLFIN_ENABLE_ZLIB, Compile with support for zlib. * DOLFIN_ENABLE_HDF5, Compile with support for HDF5. -- The following OPTIONAL packages have been found: * PETSc (required version >= 3.7), Portable, Extensible Toolkit for Scientific Computation, Enables the PETSc linear algebra backend * BLAS, Basic Linear Algebra Subprograms, * HDF5, Hierarchical Data Format 5 (HDF5), * ZLIB, Compression library, -- The following REQUIRED packages have been found: * Boost, Boost C++ libraries, * Eigen3 (required version >= 3.2.90), Lightweight C++ template library for linear algebra, * PythonInterp (required version >= 3), Interactive high-level object-oriented language, * UFC (required version >= 2019.1), Unified language for form-compilers (part of FFC), * PkgConfig -- The following features have been disabled: * CMAKE_USE_RELATIVE_PATHS, Use relative paths in makefiles and projects. * DOLFIN_ENABLE_CODE_COVERAGE, Enable code coverage. * DOLFIN_ENABLE_BENCHMARKS, Enable benchmark programs. * DOLFIN_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * DOLFIN_DEPRECATION_ERROR, Turn deprecation warnings into errors. * DOLFIN_ENABLE_GEOMETRY_DEBUGGING, Enable geometry debugging. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. -- The following OPTIONAL packages have not been found: * MPI, Message Passing Interface (MPI) Enables DOLFIN to run in parallel with MPI * SLEPc (required version >= 3.7), Scalable Library for Eigenvalue Problem Computations, * UMFPACK, Sparse LU factorization library, * CHOLMOD, Sparse Cholesky factorization library for sparse matrices, -- -- Generating demo source files from reStructuredText -- -------------------------------------------------- /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/auto-adaptive-poisson/cpp/AdaptivePoisson.ufl /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/auto-adaptive-poisson/cpp/main.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/biharmonic/cpp/Biharmonic.ufl /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/biharmonic/cpp/main.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/built-in-meshes/cpp/main.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/eigenvalue/cpp/StiffnessMatrix.ufl /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/eigenvalue/cpp/main.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/hyperelasticity/cpp/HyperElasticity.ufl /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/hyperelasticity/cpp/main.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/mixed-poisson/cpp/MixedPoisson.ufl /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/mixed-poisson/cpp/main.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/nonmatching-interpolation/cpp/P1.ufl /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/nonmatching-interpolation/cpp/P3.ufl /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/nonmatching-interpolation/cpp/main.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/poisson/cpp/Poisson.ufl /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:479: SyntaxWarning: invalid escape sequence '\.' self.marker_regexp = re.compile('^( *(?!\.\.).*)(::)([ \n]*)$') /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/./utils/pylit/pylit.py:1592: SyntaxWarning: invalid escape sequence '\s' match = re.search('coding[=:]\s*([-\w.]+)', firstlines) extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/demo/documented/poisson/cpp/main.cpp -- -- Generating form files in demo, test and bench directories. May take some time... -- ---------------------------------------------------------------------------------------- -- -- Generating CMakeLists.txt files in demo, test and bench directories -- ------------------------------------------------------------------- -- -- Copying demo and test data to build directory. -- ---------------------------------------------- -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- Configuring done (28.0s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build + /usr/bin/make -O -j2 V=1 VERBOSE=1 /usr/bin/cmake -S/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -B/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/CMakeFiles /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/depend make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/ale /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build 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'/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 0%] Compiling form Poisson2D.ufl cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/ale/Poisson2D.ufl make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 0%] Compiling form Poisson3D.ufl cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o 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/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/AdaptiveLinearVariationalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/adapt.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/AdaptiveNonlinearVariationalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/adaptivesolve.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/ErrorControl.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/GenericAdaptiveVariationalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/GoalFunctional.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/Extrapolation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/marking.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.h:30, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:32, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:30: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:110:37: required from here 110 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, "time", t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = double; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’ 454 | get_attribute_value(attr_type, attr_id, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:110:37: required from here 110 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, "time", t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:615:12: warning: unused variable ‘status’ [-Wunused-variable] 615 | herr_t status = H5Aread(attr_id, h5type, &attribute_value); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:84:31: required from ‘void dolfin::TimeSeries::store_object(MPI_Comm, const T&, double, std::vector&, std::string, std::string) [with T = dolfin::GenericVector; MPI_Comm = int; std::string = std::__cxx11::basic_string]’ 84 | HDF5Interface::add_attribute(fid, dataset_name, "time", t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:168:15: required from here 168 | store_object(vector.mpi_comm(), vector, t, _vector_times, _name, "/Vector"); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable ‘status’ [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable ‘status’ [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’ 491 | add_attribute_value(dset_id, attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:84:31: required from ‘void dolfin::TimeSeries::store_object(MPI_Comm, const T&, double, std::vector&, std::string, std::string) [with T = dolfin::GenericVector; MPI_Comm = int; std::string = std::__cxx11::basic_string]’ 84 | HDF5Interface::add_attribute(fid, dataset_name, "time", t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:168:15: required from here 168 | store_object(vector.mpi_comm(), vector, t, _vector_times, _name, "/Vector"); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:523:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 523 | herr_t status = H5Awrite(attribute_id, h5type, &attribute_value); | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/ALE.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/ale/ALE.cpp.o -MF CMakeFiles/dolfin.dir/ale/ALE.cpp.o.d -o CMakeFiles/dolfin.dir/ale/ALE.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/ale/ALE.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o -MF CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o.d -o CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/ale/MeshDisplacement.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/defines.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -DDOLFIN_GIT_COMMIT_HASH=\"unknown\" -DUFC_SIGNATURE=\"1e5e8d5476f82af05ab9c93365d99f971e0284d6\" -MD -MT dolfin/CMakeFiles/dolfin.dir/common/defines.cpp.o -MF CMakeFiles/dolfin.dir/common/defines.cpp.o.d -o CMakeFiles/dolfin.dir/common/defines.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/defines.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/init.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/common/init.cpp.o -MF CMakeFiles/dolfin.dir/common/init.cpp.o.d -o CMakeFiles/dolfin.dir/common/init.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/init.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/MPI.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/common/MPI.cpp.o -MF CMakeFiles/dolfin.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfin.dir/common/MPI.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/MPI.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o -MF CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o.d -o CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/SubSystemsManager.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o -MF CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o.d -o CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/ale/HarmonicSmoothing.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/Timer.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/common/Timer.cpp.o -MF CMakeFiles/dolfin.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfin.dir/common/Timer.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/Timer.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o -MF CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o.d -o CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/UniqueIdGenerator.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/timing.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/common/timing.cpp.o -MF CMakeFiles/dolfin.dir/common/timing.cpp.o.d -o CMakeFiles/dolfin.dir/common/timing.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/timing.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/utils.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/common/utils.cpp.o -MF CMakeFiles/dolfin.dir/common/utils.cpp.o.d -o CMakeFiles/dolfin.dir/common/utils.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/utils.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/Variable.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/common/Variable.cpp.o -MF CMakeFiles/dolfin.dir/common/Variable.cpp.o.d -o CMakeFiles/dolfin.dir/common/Variable.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/Variable.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/assemble.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/assemble.cpp.o -MF CMakeFiles/dolfin.dir/fem/assemble.cpp.o.d -o CMakeFiles/dolfin.dir/fem/assemble.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/assemble.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o -MF CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o.d -o CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/assemble_local.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o -MF CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o.d -o CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/AssemblerBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Assembler.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/Assembler.cpp.o -MF CMakeFiles/dolfin.dir/fem/Assembler.cpp.o.d -o CMakeFiles/dolfin.dir/fem/Assembler.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/Assembler.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o -MF CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o.d -o CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/DiscreteOperators.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o -MF CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o.d -o CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/DirichletBC.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DofMap.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/DofMap.cpp.o -MF CMakeFiles/dolfin.dir/fem/DofMap.cpp.o.d -o CMakeFiles/dolfin.dir/fem/DofMap.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/DofMap.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Equation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/Equation.cpp.o -MF CMakeFiles/dolfin.dir/fem/Equation.cpp.o.d -o CMakeFiles/dolfin.dir/fem/Equation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/Equation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o -MF CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o.d -o CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/DofMapBuilder.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/DofMapBuilder.cpp: In static member function ‘static void dolfin::DofMapBuilder::compute_node_reordering(dolfin::IndexMap&, std::vector&, const std::unordered_map >&, const std::vector&, const std::vector >&, const std::vector&, const std::set&, MPI_Comm)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/DofMapBuilder.cpp:1663:13: warning: unused variable ‘it’ [-Wunused-variable] 1663 | for (auto it : old_to_new_local) | ^~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o -MF CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o.d -o CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/fem_utils.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o -MF CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o.d -o CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/FiniteElement.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o -MF CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o.d -o CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/LinearTimeDependentProblem.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Form.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/Form.cpp.o -MF CMakeFiles/dolfin.dir/fem/Form.cpp.o.d -o CMakeFiles/dolfin.dir/fem/Form.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/Form.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o -MF CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o.d -o CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/LinearVariationalProblem.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/LinearVariationalProblem.cpp: In member function ‘void dolfin::LinearVariationalProblem::check_forms() const’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/LinearVariationalProblem.cpp:114:19: warning: loop variable ‘bc’ creates a copy from type ‘const std::shared_ptr’ [-Wrange-loop-construct] 114 | for (const auto bc: _bcs) | ^~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/LinearVariationalProblem.cpp:114:19: note: use reference type to prevent copying 114 | for (const auto bc: _bcs) | ^~ | & make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o -MF CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/LinearVariationalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o -MF CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o.d -o CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/LocalAssembler.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o -MF CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o.d -o CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/MultiMeshAssembler.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o -MF CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/LocalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o -MF CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o.d -o CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/MultiMeshDirichletBC.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o -MF CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o.d -o CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/MultiMeshForm.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o -MF CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o.d -o CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/MultiMeshDofMap.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o -MF CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o.d -o CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/NonlinearVariationalProblem.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/NonlinearVariationalProblem.cpp: In member function ‘void dolfin::NonlinearVariationalProblem::check_forms() const’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/NonlinearVariationalProblem.cpp:156:19: warning: loop variable ‘bc’ creates a copy from type ‘const std::shared_ptr’ [-Wrange-loop-construct] 156 | for (const auto bc: _bcs) | ^~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/NonlinearVariationalProblem.cpp:156:19: note: use reference type to prevent copying 156 | for (const auto bc: _bcs) | ^~ | & make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o -MF CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/NonlinearVariationalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/PointSource.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/PointSource.cpp.o -MF CMakeFiles/dolfin.dir/fem/PointSource.cpp.o.d -o CMakeFiles/dolfin.dir/fem/PointSource.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/PointSource.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/solve.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/solve.cpp.o -MF CMakeFiles/dolfin.dir/fem/solve.cpp.o.d -o CMakeFiles/dolfin.dir/fem/solve.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/solve.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o -MF CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o.d -o CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/PETScDMCollection.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/PETScDMCollection.cpp: In static member function ‘static std::shared_ptr dolfin::PETScDMCollection::create_transfer_matrix(const dolfin::FunctionSpace&, const dolfin::FunctionSpace&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/PETScDMCollection.cpp:545:15: warning: unused variable ‘mend’ [-Wunused-variable] 545 | std::size_t mend = finemap->ownership_range().second; | ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o -MF CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o.d -o CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/SparsityPatternBuilder.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o -MF CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o.d -o CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/SystemAssembler.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/UFC.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/UFC.cpp.o -MF CMakeFiles/dolfin.dir/fem/UFC.cpp.o.d -o CMakeFiles/dolfin.dir/fem/UFC.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/UFC.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o -MF CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o.d -o CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/CoefficientAssigner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/assign.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/assign.cpp.o -MF CMakeFiles/dolfin.dir/function/assign.cpp.o.d -o CMakeFiles/dolfin.dir/function/assign.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/assign.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Constant.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/Constant.cpp.o -MF CMakeFiles/dolfin.dir/function/Constant.cpp.o.d -o CMakeFiles/dolfin.dir/function/Constant.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/Constant.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Expression.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/Expression.cpp.o -MF CMakeFiles/dolfin.dir/function/Expression.cpp.o.d -o CMakeFiles/dolfin.dir/function/Expression.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/Expression.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o -MF CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o.d -o CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/FunctionAssigner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o -MF CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o.d -o CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/FunctionAXPY.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o -MF CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o.d -o CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/FunctionSpace.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Function.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/Function.cpp.o -MF CMakeFiles/dolfin.dir/function/Function.cpp.o.d -o CMakeFiles/dolfin.dir/function/Function.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/Function.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o -MF CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o.d -o CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/GenericFunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o -MF CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o.d -o CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/MultiMeshCoefficientAssigner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o -MF CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o.d -o CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/LagrangeInterpolator.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o -MF CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o.d -o CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/MultiMeshFunctionSpace.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o -MF CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o.d -o CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/MultiMeshFunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o -MF CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o.d -o CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/MultiMeshSubSpace.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o -MF CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o.d -o CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/SpecialFacetFunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/SpecialFunctions.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG 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/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/function/SpecialFunctions.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/generation/BoxMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/generation/IntervalMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/generation/RectangleMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/generation/SphericalShellMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/generation/UnitDiscMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/generation/UnitTetrahedronMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/generation/UnitTriangleMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o -MF CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/BoundingBoxTree.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o -MF CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/CollisionPredicates.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o -MF CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/ConvexTriangulation.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/ConvexTriangulation.cpp: In static member function ‘static std::vector > dolfin::ConvexTriangulation::_triangulate_1d(const std::vector&, std::size_t)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/ConvexTriangulation.cpp:238:10: warning: variable ‘collinear’ set but not used [-Wunused-but-set-variable] 238 | bool collinear = true; | ^~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o -MF CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp: In static member function ‘static void dolfin::GeometryDebugging::print(const std::vector&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:42:20: warning: loop variable ‘p’ creates a copy from type ‘const dolfin::Point’ [-Wrange-loop-construct] 42 | for (const Point p : simplex) | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:42:20: note: use reference type to prevent copying 42 | for (const Point p : simplex) | ^ | & /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp: In static member function ‘static void dolfin::GeometryDebugging::print(const std::vector&, const std::vector&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:52:20: warning: loop variable ‘p’ creates a copy from type ‘const dolfin::Point’ [-Wrange-loop-construct] 52 | for (const Point p : simplex_0) | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:52:20: note: use reference type to prevent copying 52 | for (const Point p : simplex_0) | ^ | & /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:57:20: warning: loop variable ‘p’ creates a copy from type ‘const dolfin::Point’ [-Wrange-loop-construct] 57 | for (const Point p : simplex_1) | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:57:20: note: use reference type to prevent copying 57 | for (const Point p : simplex_1) | ^ | & make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o -MF CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GeometryPredicates.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o -MF CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/GenericBoundingBoxTree.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/intersect.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/intersect.cpp.o -MF CMakeFiles/dolfin.dir/geometry/intersect.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/intersect.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/intersect.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o -MF CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/MeshPointIntersection.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/Point.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/Point.cpp.o -MF CMakeFiles/dolfin.dir/geometry/Point.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/Point.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/Point.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o -MF CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/IntersectionConstruction.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/predicates.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/predicates.cpp.o -MF CMakeFiles/dolfin.dir/geometry/predicates.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/predicates.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/predicates.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o -MF CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o.d -o CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/graph/BoostGraphOrdering.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o -MF CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o.d -o CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/graph/GraphBuilder.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/graph/GraphBuilder.cpp: In static member function ‘static int32_t dolfin::GraphBuilder::compute_nonlocal_dual_graph(MPI_Comm, const boost::multi_array&, const dolfin::CellType&, int64_t, std::vector >&, FacetCellMap&, std::set&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/graph/GraphBuilder.cpp:364:21: warning: unused variable ‘num_vertices_per_cell’ [-Wunused-variable] 364 | const std::int8_t num_vertices_per_cell = cell_type.num_entities(0); | ^~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o -MF CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o.d -o CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/graph/GraphColoring.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o -MF CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o.d -o CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/graph/ParMETIS.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o -MF CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/geometry/SimplexQuadrature.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o -MF CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o.d -o CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/graph/ZoltanInterface.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/base64.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/base64.cpp.o -MF CMakeFiles/dolfin.dir/io/base64.cpp.o.d -o CMakeFiles/dolfin.dir/io/base64.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/base64.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o -MF CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o.d -o CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/graph/SCOTCH.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/GenericFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/GenericFile.cpp.o -MF CMakeFiles/dolfin.dir/io/GenericFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/GenericFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/GenericFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/File.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/File.cpp.o -MF CMakeFiles/dolfin.dir/io/File.cpp.o.d -o CMakeFiles/dolfin.dir/io/File.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/File.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/File.cpp: In member function ‘void dolfin::File::init(MPI_Comm, std::string, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/File.cpp:150:61: warning: ‘std::string boost::filesystem::extension(const path&)’ is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 150 | const std::string extension = boost::filesystem::extension(path); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/boost/filesystem.hpp:21, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/File.cpp:21: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/File.cpp:157:63: warning: ‘std::string boost::filesystem::basename(const path&)’ is deprecated: Use path::stem() instead [-Wdeprecated-declarations] 157 | boost::filesystem::extension(boost::filesystem::basename(path)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /usr/include/boost/filesystem/convenience.hpp:35:20: note: declared here 35 | inline std::string basename(const path& p) | ^~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/File.cpp:157:35: warning: ‘std::string boost::filesystem::extension(const path&)’ is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 157 | boost::filesystem::extension(boost::filesystem::basename(path)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o -MF CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o.d -o CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:28: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from ‘void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = double; std::string = std::__cxx11::basic_string]’ 65 | HDF5Interface::add_attribute(hdf5_file_id, dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:95:12: required from here 95 | set_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable ‘status’ [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable ‘status’ [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from ‘void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = long unsigned int; std::string = std::__cxx11::basic_string]’ 65 | HDF5Interface::add_attribute(hdf5_file_id, dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:101:12: required from here 101 | set_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable ‘status’ [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable ‘status’ [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from ‘void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = std::vector; std::string = std::__cxx11::basic_string]’ 65 | HDF5Interface::add_attribute(hdf5_file_id, dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:107:12: required from here 107 | set_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable ‘status’ [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable ‘status’ [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from ‘void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = std::vector; std::string = std::__cxx11::basic_string]’ 65 | HDF5Interface::add_attribute(hdf5_file_id, dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:113:12: required from here 113 | set_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable ‘status’ [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable ‘status’ [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from ‘void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = std::__cxx11::basic_string; std::string = std::__cxx11::basic_smake[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' tring]’ 65 | HDF5Interface::add_attribute(hdf5_file_id, dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:119:12: required from here 119 | set_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable ‘status’ [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable ‘status’ [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from ‘void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = double; std::string = std::__cxx11::basic_string]’ 88 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, attribute_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 | attribute_value); | ~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:125:12: required from here 125 | get_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from ‘void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = long unsigned int; std::string = std::__cxx11::basic_string]’ 88 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, attribute_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 | attribute_value); | ~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:131:12: required from here 131 | get_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from ‘void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = std::vector; std::string = std::__cxx11::basic_string]’ 88 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, attribute_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 | attribute_value); | ~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:137:12: required from here 137 | get_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from ‘void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = std::vector; std::string = std::__cxx11::basic_string]’ 88 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, attribute_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 | attribute_value); | ~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:143:12: required from here 143 | get_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from ‘void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]’ 88 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, attribute_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 | attribute_value); | ~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:151:14: required from here 151 | get_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’ 491 | add_attribute_value(dset_id, attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from ‘void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = double; std::string = std::__cxx11::basic_string]’ 65 | HDF5Interface::add_attribute(hdf5_file_id, dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:95:12: required from here 95 | set_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:523:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 523 | herr_t status = H5Awrite(attribute_id, h5type, &attribute_value); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 491 | add_attribute_value(dset_id, attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from ‘void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = long unsigned int; std::string = std::__cxx11::basic_string]’ 65 | HDF5Interface::add_attribute(hdf5_file_id, dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:101:12: required from here 101 | set_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:523:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 523 | herr_t status = H5Awrite(attribute_id, h5type, &attribute_value); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const std::vector&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’ 491 | add_attribute_value(dset_id, attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from ‘void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = std::vector; std::string = std::__cxx11::basic_string]’ 65 | HDF5Interface::add_attribute(hdf5_file_id, dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:107:12: required from here 107 | set_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:555:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 555 | herr_t status = H5Awrite(attribute_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const std::vector&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’ 491 | add_attribute_value(dset_id, attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from ‘void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = std::vector; std::string = std::__cxx11::basic_string]’ 65 | HDF5Interface::add_attribute(hdf5_file_id, dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:113:12: required from here 113 | set_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:555:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 555 | herr_t status = H5Awrite(attribute_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = double; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’ 454 | get_attribute_value(attr_type, attr_id, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from ‘void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = double; std::string = std::__cxx11::basic_string]’ 88 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, attribute_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 | attribute_value); | ~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:125:12: required from here 125 | get_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:615:12: warning: unused variable ‘status’ [-Wunused-variable] 615 | herr_t status = H5Aread(attr_id, h5type, &attribute_value); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = long unsigned int; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 454 | get_attribute_value(attr_type, attr_id, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from ‘void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = long unsigned int; std::string = std::__cxx11::basic_string]’ 88 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, attribute_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 | attribute_value); | ~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:131:12: required from here 131 | get_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:615:12: warning: unused variable ‘status’ [-Wunused-variable] 615 | herr_t status = H5Aread(attr_id, h5type, &attribute_value); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, std::vector&) [with T = double; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’ 454 | get_attribute_value(attr_type, attr_id, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from ‘void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = std::vector; std::string = std::__cxx11::basic_string]’ 88 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, attribute_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 | attribute_value); | ~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:137:12: required from here 137 | get_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:636:15: warning: unused variable ‘ndims’ [-Wunused-variable] 636 | const int ndims = H5Sget_simple_extent_dims(dataspace, cur_size, max_size); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:642:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 642 | herr_t status = H5Aread(attr_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, std::vector&) [with T = long unsigned int; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’ 454 | get_attribute_value(attr_type, attr_id, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from ‘void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = std::vector; std::string = std::__cxx11::basic_string]’ 88 | HDF5Interface::get_attribute(hdf5_file_id, dataset_name, attribute_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 | attribute_value); | ~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:143:12: required from here 143 | get_value(attribute_name, value); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:636:15: warning: unused variable ‘ndims’ [-Wunused-variable] 636 | const int ndims = H5Sget_simple_extent_dims(dataspace, cur_size, max_size); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:642:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 642 | herr_t status = H5Aread(attr_id, h5type, attribute_value.data()); | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o -MF CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o.d -o CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.h:30, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:32, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:26: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static hid_t dolfin::HDF5Interface::open_file(MPI_Comm, std::string, std::string, bool)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:96:10: warning: unused variable ‘status’ [-Wunused-variable] 96 | herr_t status = H5Pclose(plist_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static void dolfin::HDF5Interface::close_file(hid_t)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:104:10: warning: unused variable ‘status’ [-Wunused-variable] 104 | herr_t status = H5Fclose(hdf5_file_handle); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static void dolfin::HDF5Interface::flush_file(hid_t)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:110:10: warning: unused variable ‘status’ [-Wunused-variable] 110 | herr_t status = H5Fflush(hdf5_file_handle, H5F_SCOPE_GLOBAL); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static const std::string dolfin::HDF5Interface::get_attribute_type(hid_t, std::string, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:135:10: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 135 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static void dolfin::HDF5Interface::delete_attribute(hid_t, std::string, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:196:10: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 196 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static const std::vector > dolfin::HDF5Interface::list_attributes(hid_t, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:234:10: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 234 | herr_t status = H5Aiterate2(dset_id, H5_INDEX_NAME, H5_ITER_INC, &n, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static bool dolfin::HDF5Interface::has_attribute(hid_t, std::string, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:250:10: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 250 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static bool dolfin::HDF5Interface::has_group(hid_t, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:272:10: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 272 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static bool dolfin::HDF5Interface::has_dataset(hid_t, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:303:10: warning: unused variable ‘status’ [-Wunused-variable] 303 | herr_t status = H5Pclose(lapl_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static void dolfin::HDF5Interface::add_group(hid_t, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:336:14: warning: unused variable ‘status’ [-Wunused-variable] 336 | herr_t status = H5Gclose(group_id_vis); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static int dolfin::HDF5Interface::dataset_rank(hid_t, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:359:10: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 359 | herr_t status = H5Sclose(space); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static std::vector dolfin::HDF5Interface::get_dataset_shape(hid_t, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:387:13: warning: unused variable ‘ndims’ [-Wunused-variable] 387 | const int ndims = H5Sget_simple_extent_dims(space, size.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:391:10: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 391 | herr_t status = H5Sclose(space); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static int dolfin::HDF5Interface::num_datasets_in_group(hid_t, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:405:10: warning: unused variable ‘status’ [-Wunused-variable] 405 | herr_t status = H5Gget_info_by_name(hdf5_file_handle, group_name.c_str(), | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function ‘static std::vector > dolfin::HDF5Interface::dataset_list(hid_t, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:418:10: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 418 | herr_t status; | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o -MF CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o.d -o CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Utility.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/pugixml.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/pugixml.cpp.o -MF CMakeFiles/dolfin.dir/io/pugixml.cpp.o.d -o CMakeFiles/dolfin.dir/io/pugixml.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/pugixml.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5File.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/HDF5File.cpp.o -MF CMakeFiles/dolfin.dir/io/HDF5File.cpp.o.d -o CMakeFiles/dolfin.dir/io/HDF5File.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.h:30, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:50: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp: In member function ‘void dolfin::HDF5File::write(const dolfin::Mesh&, std::size_t, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:446:24: warning: unused variable ‘num_cells’ [-Wunused-variable] 446 | const std::int64_t num_cells | ^~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp: In member function ‘void dolfin::HDF5File::write(const dolfin::Function&, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:918:30: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = plus; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 918 | std::bind2nd(std::plus(), offset)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/string:49, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/fstream:40, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:23: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp: In member function ‘void dolfin::HDF5File::read(dolfin::Function&, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1067:21: warning: unused variable ‘num_global_dofs’ [-Wunused-variable] 1067 | const std::size_t num_global_dofs = vector_shape[0]; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:172:31: required from here 172 | HDF5Interface::write_dataset(_hdf5_file_id, dataset_name, local_data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | local_range, global_size, mpi_io, chunking); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:181:31: required from here 181 | HDF5Interface::add_attribute(_hdf5_file_id, dataset_name, "partition", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | partitions); | ~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable ‘status’ [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable ‘status’ [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:222:35: required from here 222 | HDF5Interface::get_attribute(_hdf5_file_id, dataset_name, "partition", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 | partitions); | ~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:257:30: required from here 257 | HDF5Interface::read_dataset(_hdf5_file_id, dataset_name, local_range, data); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable ‘ndims’ [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolmake[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' fin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:465:33: required from here 465 | HDF5Interface::add_attribute(_hdf5_file_id, topology_dataset, "celltype", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 | CellType::type2string(cell_type)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable ‘status’ [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable ‘status’ [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1046:30: required from here 1046 | HDF5Interface::read_dataset(_hdf5_file_id, cells_dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 | cell_range, input_cells); | ~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable ‘ndims’ [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1058:30: required from here 1058 | HDF5Interface::read_dataset(_hdf5_file_id, cell_dofs_dataset_name, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 | std::make_pair(x_cell_dofs.front(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 | x_cell_dofs.back()), | ~~~~~~~~~~~~~~~~~~~~ 1061 | input_cell_dofs); | ~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable ‘ndims’ [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1640:33: required from here 1640 | HDF5Interface::get_attribute(_hdf5_file_id, topology_path, "celltype", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1641 | cell_type_str); | ~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = long int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1820:30: required from here 1820 | HDF5Interface::read_dataset(_hdf5_file_id, topology_path, cell_data_range, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1821 | topology_data); | ~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable ‘ndims’ [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const std::vector&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’ 491 | add_attribute_value(dset_id, attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:181:31: required from here 181 | HDF5Interface::add_attribute(_hdf5_file_id, dataset_name, "partition", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | partitions); | ~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:555:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 555 | herr_t status = H5Awrite(attribute_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, std::vector&) [with T = long unsigned int; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’ 454 | get_attribute_value(attr_type, attr_id, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:222:35: required from here 222 | HDF5Interface::get_attribute(_hdf5_file_id, dataset_name, "partition", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 | partitions); | ~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:636:15: warning: unused variable ‘ndims’ [-Wunused-variable] 636 | const int ndims = H5Sget_simple_extent_dims(dataspace, cur_size, max_size); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:642:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 642 | herr_t status = H5Aread(attr_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = long int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:277:33: required from ‘void dolfin::HDF5File::write_data(std::string, const std::vector&, std::vector, bool) [with T = long int; std::string = std::__cxx11::basic_string]’ 277 | HDF5Interface::write_dataset(_hdf5_file_id, dset_name, data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 | range, global_size, use_mpi_io, chunking); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:450:15: required from here 450 | write_data(topology_dataset, topological_data, global_size, mpi_io); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:277:33: required from ‘void dolfin::HDF5File::write_data(std::string, const std::vector&, std::vector, bool) [with T = int; std::string = std::__cxx11::basic_string]’ 277 | HDF5Interface::write_dataset(_hdf5_file_id, dset_name, data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 | range, global_size, use_mpi_io, chunking); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:925:13: required from here 925 | write_data(name + "/cell_dofs", cell_dofs, global_size, mpi_io); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:277:33: required from ‘void dolfin::HDF5File::write_data(std::string, const std::vector&, std::vector, bool) [with T = long unsigned int; std::string = std::__cxx11::basic_string]’ 277 | HDF5Interface::write_dataset(_hdf5_file_id, dset_name, data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 | range, global_size, use_mpi_io, chunking); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:929:13: required from here 929 | write_data(name + "/x_cell_dofs", x_cell_dofs, global_size, mpi_io); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1191:31: required from ‘void dolfin::HDF5File::write_mesh_value_collection(const dolfin::MeshValueCollection&, std::string) [with T = long unsigned int; std::string = std::__cxx11::basic_string]’ 1191 | HDF5Interface::add_attribute(_hdf5_file_id, name, "dimension", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1192 | mesh_values.dim()); | ~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1085:30: required from here 1085 | write_mesh_value_collection(mesh_values, name); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable ‘status’ [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable ‘status’ [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1257:31: required from ‘void dolfin::HDF5File::read_mesh_value_collection(dolfin::MeshValueCollection&, std::string) const [with T = long unsigned int; std::string = std::__cxx11::basic_string]’ 1257 | HDF5Interface::get_attribute(_hdf5_file_id, name, "dimension", dim); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1091:29: required from here 1091 | read_mesh_value_collection(mesh_values, name); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 491 | add_attribute_value(dset_id, attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1191:31: required from ‘void dolfin::HDF5File::write_mesh_value_collection(const dolfin::MeshValueCollection&, std::string) [with T = long unsigned int; std::string = std::__cxx11::basic_string]’ 1191 | HDF5Interface::add_attribute(_hdf5_file_id, name, "dimension", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1192 | mesh_values.dim()); | ~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1085:30: required from here 1085 | write_mesh_value_collection(mesh_values, name); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:523:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 523 | herr_t status = H5Awrite(attribute_id, h5type, &attribute_value); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = long unsigned int; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from ‘static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 454 | get_attribute_value(attr_type, attr_id, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1257:31: required from ‘void dolfin::HDF5File::read_mesh_value_collection(dolfin::MeshValueCollection&, std::string) const [with T = long unsigned int; std::string = std::__cxx11::basic_string]’ 1257 | HDF5Interface::get_attribute(_hdf5_file_id, name, "dimension", dim); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1091:29: required from here 1091 | read_mesh_value_collection(mesh_values, name); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:615:12: warning: unused variable ‘status’ [-Wunused-variable] 615 | herr_t status = H5Aread(attr_id, h5type, &attribute_value); | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/SVGFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/SVGFile.cpp.o -MF CMakeFiles/dolfin.dir/io/SVGFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/SVGFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/SVGFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/RAWFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/RAWFile.cpp.o -MF CMakeFiles/dolfin.dir/io/RAWFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/RAWFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/RAWFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o -MF CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o.d -o CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/VTKWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/VTKFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/VTKFile.cpp.o -MF CMakeFiles/dolfin.dir/io/VTKFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/VTKFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/VTKFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/X3DFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/X3DFile.cpp.o -MF CMakeFiles/dolfin.dir/io/X3DFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/X3DFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/X3DFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/X3DOM.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/X3DOM.cpp.o -MF CMakeFiles/dolfin.dir/io/X3DOM.cpp.o.d -o CMakeFiles/dolfin.dir/io/X3DOM.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/X3DOM.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/X3DOM.cpp: In static member function ‘static void dolfin::X3DOM::add_menu_color_tab(pugi::xml_node&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/X3DOM.cpp:933:18: warning: variable ‘br_node’ set but not used [-Wunused-but-set-variable] 933 | pugi::xml_node br_node = xml_node.append_child("br"); | ^~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLFile.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFile.cpp: In member function ‘void dolfin::XMLFile::load_xml_doc(pugi::xml_document&) const’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFile.cpp:403:61: warning: ‘std::string boost::filesystem::extension(const path&)’ is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 403 | const std::string extension = boost::filesystem::extension(path); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/boost/filesystem.hpp:21, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFile.cpp:26: /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFile.cpp: In member function ‘void dolfin::XMLFile::save_xml_doc(const pugi::xml_document&) const’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFile.cpp:467:63: warning: ‘std::string boost::filesystem::extension(const path&)’ is deprecated: Use path::extension() instead [-Wdeprecated-declarations] 467 | const std::string extension = boost::filesystem::extension(path); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here 29 | inline std::string extension(const path& p) | ^~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFunctionData.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFunctionData.cpp: In static member function ‘static void dolfin::XMLFunctionData::build_global_to_cell_dof(std::vector > >&, const dolfin::FunctionSpace&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFunctionData.cpp:212:23: warning: unused variable ‘D’ [-Wunused-variable] 212 | const std::size_t D = mesh.topology().dim(); | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFunctionData.cpp: In static member function ‘static void dolfin::XMLFunctionData::build_dof_map(std::vector >&, const dolfin::FunctionSpace&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLFunctionData.cpp:291:23: warning: unused variable ‘D’ [-Wunused-variable] 291 | const std::size_t D = mesh.topology().dim(); | ^ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o -MF CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.h:30, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:32, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:51: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In member function ‘void dolfin::XDMFFile::write_checkpoint(const dolfin::Function&, std::string, double, Encoding, bool)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:152:28: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 152 | pugi::xml_parse_result result = _xml_doc->load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:184:20: warning: variable ‘domain_node’ set but not used [-Wunused-but-set-variable] 184 | pugi::xml_node domain_node = xdmf_node.append_child("Domain"); | ^~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In member function ‘void dolfin::XDMFFile::write(const dolfin::Function&, double, Encoding)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:417:20: warning: variable ‘domain_node’ set but not used [-Wunused-but-set-variable] 417 | pugi::xml_node domain_node = xdmf_node.append_child("Domain"); | ^~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In static member function ‘static void dolfin::XDMFFile::add_function(MPI_Comm, pugi::xml_node&, hid_t, std::string, const dolfin::Function&, std::string, const dolfin::Mesh&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1268:30: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = plus; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 1268 | std::bind2nd(std::plus(), offset)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/string:49, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/iomanip:42, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:20: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In member function ‘void dolfin::XDMFFile::read(dolfin::Mesh&) const’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1326:26: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 1326 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In member function ‘void dolfin::XDMFFile::read_checkpoint(dolfin::Function&, std::string, int64_t)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1445:26: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 1445 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In static member function ‘static void dolfin::XDMFFile::build_mesh_quadratic(dolfin::Mesh&, const dolfin::CellType&, int64_t, int64_t, int, int, const pugi::xml_node&, const pugi::xml_node&, const boost::filesystem::path&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1566:13: warning: unused variable ‘num_edges_per_cell’ [-Wunused-variable] 1566 | const int num_edges_per_cell = cell_type.num_entities(1); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of ‘void dolfin::XDMFFile::read_mesh_value_collection(dolfin::MeshValueCollection&, std::string) [with T = int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:778:29: required from here 778 | read_mesh_value_collection(mvc_int, name); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:806:26: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 806 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of ‘void dolfin::XDMFFile::read_mesh_value_collection(dolfin::MeshValueCollection&, std::string) [with T = long unsigned int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:792:29: required from here 792 | read_mesh_value_collection(mvc, name); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:806:26: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 806 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of ‘void dolfin::XDMFFile::read_mesh_value_collection(dolfin::MeshValueCollection&, std::string) [with T = double; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:797:29: required from here 797 | read_mesh_value_collection(mvc, name); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:806:26: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 806 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of ‘void dolfin::XDMFFile::read_mesh_function(dolfin::MeshFunction&, std::string) [with T = long unsigned int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1119:21: required from here 1119 | read_mesh_function(mf, name); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2435:26: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 2435 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2508:22: warning: unused variable ‘num_vertices_per_cell’ [-Wunused-variable] 2508 | const unsigned int num_vertices_per_cell = cell_type->num_entities(0); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of ‘void dolfin::XDMFFile::read_mesh_function(dolfin::MeshFunction&, std::string) [with T = int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1127:21: required from here 1127 | read_mesh_function(meshfunction, name); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2435:26: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 2435 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2508:22: warning: unused variable ‘num_vertices_per_cell’ [-Wunused-variable] 2508 | const unsigned int num_vertices_per_cell = cell_type->num_entities(0); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of ‘void dolfin::XDMFFile::read_mesh_function(dolfin::MeshFunction&, std::string) [with T = double; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1137:21: required from here 1137 | read_mesh_function(meshfunction, name); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2435:26: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 2435 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2508:22: warning: unused variable ‘num_vertices_per_cell’ [-Wunused-variable] 2508 | const unsigned int num_vertices_per_cell = cell_type->num_entities(0); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1941:33: required from ‘static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 1941 | HDF5Interface::write_dataset(h5_id, h5_path, x, local_range, shape, use_mpi_io, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1942 | false); | ~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.h:606:18: required from here 606 | add_data_item(comm, xml_node, h5_id, h5_path, x_int, shape, number_type); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1949:33: required from ‘static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 1949 | HDF5Interface::add_attribute(h5_id, h5_path, "partition", partitions); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.h:606:18: required from here 606 | add_data_item(comm, xml_node, h5_id, h5_path, x_int, shape, number_type); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable ‘status’ [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable ‘status’ [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1941:33: required from ‘static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 1941 | HDF5Interface::write_dataset(h5_id, h5_path, x, local_range, shape, use_mpi_io, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1942 | false); | ~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:391:16: required from here 391 | add_data_item(_mpi_comm.comm(), attribute_node, h5_id, | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 | "/VisualisationVector/0", data_values, {num_values, width}); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1941:33: required from ‘static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 1941 | HDF5Interface::write_dataset(h5_id, h5_path, x, local_range, shape, use_mpi_io, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1942 | false); | ~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1293:16: required from here 1293 | add_data_item(mpi_comm, fe_attribute_node, h5_id, | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1294 | h5_path + "/x_cell_dofs", x_cell_dofs, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1295 | {num_x_cell_dofs_global, 1}, "UInt"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2363:32: required from ‘static std::vector dolfin::XDMFFile::get_dataset(MPI_Comm, const pugi::xml_node&, const boost::filesystem::path&, std::pair) [with T = long unsigned int; MPI_Comm = int]’ 2363 | HDF5Interface::read_dataset(h5_file.h5_id(), paths[1], range, data_vector); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1509:31: required from here 1509 | = get_dataset(_mpi_comm.comm(), cells_dataitem, parent_path); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable ‘ndims’ [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2363:32: required from ‘static std::vector dolfin::XDMFFile::get_dataset(MPI_Comm, const pugi::xml_node&, const boost::filesystem::path&, std::pair) [with T = int; MPI_Comm = int]’ 2363 | HDF5Interface::read_dataset(h5_file.h5_id(), paths[1], range, data_vector); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1526:36: required from here 1526 | = get_dataset(_mpi_comm.comm(), cell_dofs_dataitem, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1527 | parent_path, | ~~~~~~~~~~~~ 1528 | std::make_pair(x_cell_dofs.front(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1529 | x_cell_dofs.back())); | ~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable ‘ndims’ [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2363:32: required from ‘static std::vector dolfin::XDMFFile::get_dataset(MPI_Comm, const pugi::xml_node&, const boost::filesystem::path&, std::pair) [with T = double; MPI_Comm = int]’ 2363 | HDF5Interface::read_dataset(h5_file.h5_id(), paths[1], range, data_vector); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1541:26: required from here 1541 | = get_dataset(_mpi_comm.comm(), vector_dataitem, parent_path, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1542 | input_vector_range); | ~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable ‘ndims’ [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = long int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2363:32: required from ‘static std::vector dolfin::XDMFFile::get_dataset(MPI_Comm, const pugi::xml_node&, const boost::filesystem::path&, std::pair) [with T = long int; MPI_Comm = int]’ 2363 | HDF5Interface::read_dataset(h5_file.h5_id(), paths[1], range, data_vector); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1729:55: required from here 1729 | const auto topology_data = get_dataset(local_mesh_data.mpi_comm(), | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1730 | topology_dataset_node, | ~~~~~~~~~~~~~~~~~~~~~~ 1731 | relative_path); | ~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable ‘ndims’ [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const std::vector&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from ‘static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]’ 491 | add_attribute_value(dset_id, attribute_name, attribute_value); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1949:33: required from ‘static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 1949 | HDF5Interface::add_attribute(h5_id, h5_path, "partition", partitions); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.h:606:18: required from here 606 | add_data_item(comm, xml_node, h5_id, h5_path, x_int, shape, number_type); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:555:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 555 | herr_t status = H5Awrite(attribute_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of ‘static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = long int; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1941:33: required from ‘static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 1941 | HDF5Interface::write_dataset(h5_id, h5_path, x, local_range, shape, use_mpi_io, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1942 | false); | ~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1827:16: required from ‘static void dolfin::XDMFFile::add_topology_data(MPI_Comm, pugi::xml_node&, hid_t, std::string, const dolfin::Mesh&, int) [with T = long int; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]’ 1827 | add_data_item(comm, topology_node, h5_id, h5_path, | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1828 | topology_data, shape, number_type); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1159:36: required from here 1159 | add_topology_data(comm, grid_node, h5_id, path_prefix, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 | mesh, tdim); | ~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLTable.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLTable.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLTable.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLTable.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLTable.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/xmlutils.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/xmlutils.cpp.o -MF CMakeFiles/dolfin.dir/io/xmlutils.cpp.o.d -o CMakeFiles/dolfin.dir/io/xmlutils.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/xmlutils.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLVector.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLVector.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLVector.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLVector.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XMLVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/Amesos2LUSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/BelosKrylovSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XYZFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XYZFile.cpp.o -MF CMakeFiles/dolfin.dir/io/XYZFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/XYZFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/XYZFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/BlockMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BlockVector.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/BlockVector.cpp.o -MF CMakeFiles/dolfin.dir/la/BlockVector.cpp.o.d -o CMakeFiles/dolfin.dir/la/BlockVector.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/BlockVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/CoordinateMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o -MF CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o.d -o CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/DefaultFactory.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o -MF CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o.d -o CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/EigenFactory.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/EigenLUSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/EigenKrylovSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/EigenMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/GenericLinearSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/GenericLinearSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/GenericLinearSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/GenericLinearSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/GenericLinearSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenVector.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/EigenVector.cpp.o -MF CMakeFiles/dolfin.dir/la/EigenVector.cpp.o.d -o CMakeFiles/dolfin.dir/la/EigenVector.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/EigenVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/Ifpack2Preconditioner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/Ifpack2Preconditioner.cpp.o -MF CMakeFiles/dolfin.dir/la/Ifpack2Preconditioner.cpp.o.d -o CMakeFiles/dolfin.dir/la/Ifpack2Preconditioner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/Ifpack2Preconditioner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/GenericMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/GenericMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/GenericMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/GenericMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/GenericMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/IndexMap.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/IndexMap.cpp.o -MF CMakeFiles/dolfin.dir/la/IndexMap.cpp.o.d -o CMakeFiles/dolfin.dir/la/IndexMap.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/IndexMap.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/KrylovSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/KrylovSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/KrylovSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/KrylovSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/KrylovSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 59%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/LinearOperator.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/LinearOperator.cpp.o -MF CMakeFiles/dolfin.dir/la/LinearOperator.cpp.o.d -o CMakeFiles/dolfin.dir/la/LinearOperator.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/LinearOperator.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 59%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/LinearSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/LinearSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/LinearSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/LinearSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/LinearSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 60%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/MueluPreconditioner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/MueluPreconditioner.cpp.o -MF CMakeFiles/dolfin.dir/la/MueluPreconditioner.cpp.o.d -o CMakeFiles/dolfin.dir/la/MueluPreconditioner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/MueluPreconditioner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 59%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/LUSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/LUSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/LUSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/LUSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/LUSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 60%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScBaseMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScBaseMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScBaseMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScBaseMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScBaseMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 60%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScFactory.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScFactory.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScFactory.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScFactory.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScFactory.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScLinearOperator.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScLinearOperator.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScLinearOperator.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScLinearOperator.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScLinearOperator.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScKrylovSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScKrylovSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScKrylovSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScKrylovSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.cpp: In member function ‘void dolfin::PETScKrylovSolver::monitor(bool)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.cpp:500:77: warning: ‘PetscErrorCode KSPMonitorTrueResidualNorm(KSP, PetscInt, PetscReal, PetscViewerAndFormat*)’ is deprecated: Use "KSPMonitorTrueResidual()" (since version 3.15.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_15_0. [-Wdeprecated-declarations] 500 | (PetscErrorCode (*)(KSP,PetscInt,PetscReal,void*)) KSPMonitorTrueResidualNorm, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/petsc/petscsnes.h:6, from /usr/include/petsc/petscts.h:7, from /usr/include/petsc/petsc.h:31, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/SubSystemsManager.h:24, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScObject.h:24, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScBaseMatrix.h:37, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScMatrix.h:41, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/fem/PETScDMCollection.h:28, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.cpp:29: /usr/include/petsc/petscksp.h:484:96: note: declared here 484 | PETSC_DEPRECATED_FUNCTION(3, 15, 0, "KSPMonitorTrueResidual()", ) static inline PetscErrorCode KSPMonitorTrueResidualNorm(KSP ksp, PetscInt n, PetscReal rnorm, PetscViewerAndFormat *vf) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScLUSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 64%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScObject.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScObject.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScObject.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScObject.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScObject.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 64%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScOptions.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScOptions.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScOptions.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScOptions.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScOptions.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 64%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScPreconditioner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScPreconditioner.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScPreconditioner.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScPreconditioner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScPreconditioner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/SLEPcEigenSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/SLEPcEigenSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/SLEPcEigenSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/SLEPcEigenSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/SLEPcEigenSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScVector.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScVector.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScVector.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScVector.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/solve.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/solve.cpp.o -MF CMakeFiles/dolfin.dir/la/solve.cpp.o.d -o CMakeFiles/dolfin.dir/la/solve.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/solve.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/SparsityPattern.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/SparsityPattern.cpp.o -MF CMakeFiles/dolfin.dir/la/SparsityPattern.cpp.o.d -o CMakeFiles/dolfin.dir/la/SparsityPattern.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/SparsityPattern.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/SparsityPattern.cpp: In member function ‘void dolfin::SparsityPattern::insert_full_rows_local(const std::vector&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/SparsityPattern.cpp:261:21: warning: unused variable ‘ghosted_size0’ [-Wunused-variable] 261 | const std::size_t ghosted_size0 = | ^~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/SparsityPattern.cpp: In member function ‘void dolfin::SparsityPattern::apply()’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/SparsityPattern.cpp:384:21: warning: unused variable ‘proc_number’ [-Wunused-variable] 384 | const std::size_t proc_number = _mpi_comm.rank(); | ^~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 67%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TensorLayout.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/TensorLayout.cpp.o -MF CMakeFiles/dolfin.dir/la/TensorLayout.cpp.o.d -o CMakeFiles/dolfin.dir/la/TensorLayout.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/TensorLayout.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 67%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TpetraFactory.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/TpetraFactory.cpp.o -MF CMakeFiles/dolfin.dir/la/TpetraFactory.cpp.o.d -o CMakeFiles/dolfin.dir/la/TpetraFactory.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/TpetraFactory.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TpetraMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/TpetraMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/TpetraMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/TpetraMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/TpetraMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TpetraVector.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/TpetraVector.cpp.o -MF CMakeFiles/dolfin.dir/la/TpetraVector.cpp.o.d -o CMakeFiles/dolfin.dir/la/TpetraVector.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/TpetraVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TrilinosParameters.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/TrilinosParameters.cpp.o -MF CMakeFiles/dolfin.dir/la/TrilinosParameters.cpp.o.d -o CMakeFiles/dolfin.dir/la/TrilinosParameters.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/TrilinosParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 67%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/test_nullspace.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/test_nullspace.cpp.o -MF CMakeFiles/dolfin.dir/la/test_nullspace.cpp.o.d -o CMakeFiles/dolfin.dir/la/test_nullspace.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/test_nullspace.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 70%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Event.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/log/Event.cpp.o -MF CMakeFiles/dolfin.dir/log/Event.cpp.o.d -o CMakeFiles/dolfin.dir/log/Event.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/log/Event.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/VectorSpaceBasis.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/la/VectorSpaceBasis.cpp.o -MF CMakeFiles/dolfin.dir/la/VectorSpaceBasis.cpp.o.d -o CMakeFiles/dolfin.dir/la/VectorSpaceBasis.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/VectorSpaceBasis.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 70%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/log.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/log/log.cpp.o -MF CMakeFiles/dolfin.dir/log/log.cpp.o.d -o CMakeFiles/dolfin.dir/log/log.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/log/log.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/LogManager.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/log/LogManager.cpp.o -MF CMakeFiles/dolfin.dir/log/LogManager.cpp.o.d -o CMakeFiles/dolfin.dir/log/LogManager.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/log/LogManager.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 70%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Logger.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/log/Logger.cpp.o -MF CMakeFiles/dolfin.dir/log/Logger.cpp.o.d -o CMakeFiles/dolfin.dir/log/Logger.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/log/Logger.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Progress.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/log/Progress.cpp.o -MF CMakeFiles/dolfin.dir/log/Progress.cpp.o.d -o CMakeFiles/dolfin.dir/log/Progress.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/log/Progress.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/LogStream.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/log/LogStream.cpp.o -MF CMakeFiles/dolfin.dir/log/LogStream.cpp.o.d -o CMakeFiles/dolfin.dir/log/LogStream.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/log/LogStream.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 73%] Building CXX object dolfin/CMakeFiles/dolfin.dir/math/basic.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/math/basic.cpp.o -MF CMakeFiles/dolfin.dir/math/basic.cpp.o.d -o CMakeFiles/dolfin.dir/math/basic.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/math/basic.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 73%] Building CXX object dolfin/CMakeFiles/dolfin.dir/math/Lagrange.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/math/Lagrange.cpp.o -MF CMakeFiles/dolfin.dir/math/Lagrange.cpp.o.d -o CMakeFiles/dolfin.dir/math/Lagrange.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/math/Lagrange.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Table.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/log/Table.cpp.o -MF CMakeFiles/dolfin.dir/log/Table.cpp.o.d -o CMakeFiles/dolfin.dir/log/Table.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/log/Table.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 73%] Building CXX object dolfin/CMakeFiles/dolfin.dir/math/Legendre.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/math/Legendre.cpp.o -MF CMakeFiles/dolfin.dir/math/Legendre.cpp.o.d -o CMakeFiles/dolfin.dir/math/Legendre.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/math/Legendre.cpp In file included from /usr/include/boost/math/special_functions/detail/round_fwd.hpp:11, from /usr/include/boost/math/special_functions/math_fwd.hpp:29, from /usr/include/boost/math/special_functions/legendre.hpp:16, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/math/Legendre.cpp:24: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 75%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/BoundaryMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/BoundaryMesh.cpp.o -MF CMakeFiles/dolfin.dir/mesh/BoundaryMesh.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/BoundaryMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/BoundaryMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 75%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Cell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/Cell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/Cell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/Cell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/Cell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 75%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/BoundaryComputation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/BoundaryComputation.cpp.o -MF CMakeFiles/dolfin.dir/mesh/BoundaryComputation.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/BoundaryComputation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/BoundaryComputation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/CellType.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/CellType.cpp.o -MF CMakeFiles/dolfin.dir/mesh/CellType.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/CellType.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/CellType.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/DynamicMeshEditor.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/DynamicMeshEditor.cpp.o -MF CMakeFiles/dolfin.dir/mesh/DynamicMeshEditor.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/DynamicMeshEditor.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/DynamicMeshEditor.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Edge.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/Edge.cpp.o -MF CMakeFiles/dolfin.dir/mesh/Edge.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/Edge.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/Edge.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 78%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Face.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/Face.cpp.o -MF CMakeFiles/dolfin.dir/mesh/Face.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/Face.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/Face.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/DistributedMeshTools.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/DistributedMeshTools.cpp.o -MF CMakeFiles/dolfin.dir/mesh/DistributedMeshTools.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/DistributedMeshTools.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/DistributedMeshTools.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 78%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/FacetCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/FacetCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/FacetCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/FacetCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/FacetCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 78%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Facet.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/Facet.cpp.o -MF CMakeFiles/dolfin.dir/mesh/Facet.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/Facet.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/Facet.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/IntervalCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/IntervalCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/IntervalCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/IntervalCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/IntervalCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/HexahedronCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/HexahedronCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/HexahedronCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/HexahedronCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/HexahedronCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshColoring.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshColoring.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshColoring.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshColoring.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshColoring.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/LocalMeshData.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/LocalMeshData.cpp.o -MF CMakeFiles/dolfin.dir/mesh/LocalMeshData.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/LocalMeshData.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/LocalMeshData.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 81%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshConnectivity.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshConnectivity.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshConnectivity.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshConnectivity.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshConnectivity.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 81%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshData.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshData.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshData.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshData.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshData.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshDomains.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshDomains.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshDomains.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshDomains.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshDomains.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 81%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Mesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/Mesh.cpp.o -MF CMakeFiles/dolfin.dir/mesh/Mesh.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/Mesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/Mesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshEntity.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshEntity.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshEntity.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshEntity.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshEntity.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshEditor.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshEditor.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshEditor.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshEditor.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshEditor.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshGeometry.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshOrdering.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshHierarchy.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshQuality.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp: In static member function ‘static dolfin::Mesh dolfin::MeshRenumbering::renumber_by_color(const dolfin::Mesh&, std::vector)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp:149:42: warning: variable ‘insert’ set but not used [-Wunused-but-set-variable] 149 | std::pair insert | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp: In static member function ‘static void dolfin::MeshRenumbering::compute_renumbering(const dolfin::Mesh&, const std::vector&, std::vector&, std::vector&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp:167:21: warning: unused variable ‘num_cells’ [-Wunused-variable] 167 | const std::size_t num_cells = mesh.num_cells(); | ^~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp:204:35: warning: unused variable ‘colors_old’ [-Wunused-variable] 204 | const std::vector& colors_old = mesh_coloring->second.first; | ^~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshPartitioning.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshPartitioning.cpp: In static member function ‘static int32_t dolfin::MeshPartitioning::distribute_cells(MPI_Comm, const dolfin::LocalMeshData&, const std::vector&, const std::map >&, boost::multi_array&, std::vector&, std::vector&, std::map >&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshPartitioning.cpp:727:21: warning: unused variable ‘num_local_cells’ [-Wunused-variable] 727 | const std::size_t num_local_cells = mesh_data.topology.cell_vertices.size(); | ^~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshSmoothing.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 87%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshTopology.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 87%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshTransformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o -MF CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/PeriodicBoundaryComputation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/PointCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/QuadrilateralCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 87%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp: In member function ‘void dolfin::MultiMesh::_build_quadrature_rules_overlap(std::size_t)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:778:55: warning: loop variable ‘cutting’ creates a copy from type ‘const std::pair’ [-Wrange-loop-construct] 778 | for (const std::pair cutting : cutting_cells) | ^~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:778:55: note: use reference type to prevent copying 778 | for (const std::pair cutting : cutting_cells) | ^~~~~~~ | & /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp: In member function ‘void dolfin::MultiMesh::_build_quadrature_rules_interface(std::size_t)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:931:21: warning: loop variable ‘cut_i’ creates a copy from type ‘const std::pair > >’ [-Wrange-loop-construct] 931 | for (const auto cut_i: cmap) | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:931:21: note: use reference type to prevent copying 931 | for (const auto cut_i: cmap) | ^~~~~ | & /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:995:25: warning: loop variable ‘boundary_cell_index_j’ creates a copy from type ‘const std::pair’ [-Wrange-loop-construct] 995 | for (const auto boundary_cell_index_j: full_to_bdry[cutting_part_j][cutting_cell_index_j]) | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:995:25: note: use reference type to prevent copying 995 | for (const auto boundary_cell_index_j: full_to_bdry[cutting_part_j][cutting_cell_index_j]) | ^~~~~~~~~~~~~~~~~~~~~ | & make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 90%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o -MF CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/SubMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o -MF CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/SubDomain.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 90%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/TetrahedronCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 92%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/TriangleCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 90%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o -MF CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/TopologyComputation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 92%] Building CXX object dolfin/CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o -MF CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o.d -o CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp: In member function ‘void dolfin::MultiStageScheme::_check_arguments()’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp:228:23: warning: loop variable ‘bc’ creates a copy from type ‘const std::shared_ptr’ [-Wrange-loop-construct] 228 | for (const auto bc: _bcs) | ^~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp:228:23: note: use reference type to prevent copying 228 | for (const auto bc: _bcs) | ^~ | & /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp:260:23: warning: loop variable ‘bc’ creates a copy from type ‘const std::shared_ptr’ [-Wrange-loop-construct] 260 | for (const auto bc: _bcs) | ^~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp:260:23: note: use reference type to prevent copying 260 | for (const auto bc: _bcs) | ^~ | & make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o -MF CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o.d -o CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/multistage/RKSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 92%] Building CXX object dolfin/CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o -MF CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o.d -o CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/multistage/PointIntegralSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o -MF CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o.d -o CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/NewtonSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o -MF CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o.d -o CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp: In constructor ‘dolfin::PETScTAOSolver::PETScTAOSolver(MPI_Comm, std::string, std::string, std::string)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp:99:30: warning: ‘PetscErrorCode TaoSetHessianRoutine(Tao, Mat, Mat, PetscErrorCode (*)(Tao, Vec, Mat, Mat, void*), void*)’ is deprecated: Use "TaoSetHessian()" (since version 3.17.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_17_0. [-Wdeprecated-declarations] 99 | ierr = TaoSetHessianRoutine(_tao, _matH.mat(), _matP.mat(), nullptr, nullptr); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/petsc/petsc.h:32, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/SubSystemsManager.h:24, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScObject.h:24, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.h:34, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp:31: /usr/include/petsc/petsctao.h:361:87: note: declared here 361 | PETSC_DEPRECATED_FUNCTION(3, 17, 0, "TaoSetHessian()", ) static inline PetscErrorCode TaoSetHessianRoutine(Tao t, Mat H, Mat P, PetscErrorCode (*f)(Tao, Vec, Mat, Mat, void *), void *c) | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp: In member function ‘void dolfin::PETScTAOSolver::init(dolfin::OptimisationProblem&, dolfin::PETScVector&, const dolfin::PETScVector&, const dolfin::PETScVector&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp:226:29: warning: ‘PetscErrorCode TaoSetInitialVector(Tao, Vec)’ is deprecated: Use "TaoSetSolution()" (since version 3.17.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_17_0. [-Wdeprecated-declarations] 226 | ierr = TaoSetInitialVector(_tao, x.vec()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/petsc/petsctao.h:328:88: note: declared here 328 | PETSC_DEPRECATED_FUNCTION(3, 17, 0, "TaoSetSolution()", ) static inline PetscErrorCode TaoSetInitialVector(Tao t, Vec v) | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp:237:43: warning: ‘PetscErrorCode TaoSetObjectiveAndGradientRoutine(Tao, PetscErrorCode (*)(Tao, Vec, PetscReal*, Vec, void*), void*)’ is deprecated: Use "TaoSetObjectiveAndGradient()" (since version 3.17.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_17_0. [-Wdeprecated-declarations] 237 | ierr = TaoSetObjectiveAndGradientRoutine(_tao, FormFunctionGradient, &_tao_ctx); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/petsc/petsctao.h:357:100: note: declared here 357 | PETSC_DEPRECATED_FUNCTION(3, 17, 0, "TaoSetObjectiveAndGradient()", ) static inline PetscErrorCode TaoSetObjectiveAndGradientRoutine(Tao t, PetscErrorCode (*f)(Tao, Vec, PetscReal *, Vec, void *), void *c) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp:239:30: warning: ‘PetscErrorCode TaoSetHessianRoutine(Tao, Mat, Mat, PetscErrorCode (*)(Tao, Vec, Mat, Mat, void*), void*)’ is deprecated: Use "TaoSetHessian()" (since version 3.17.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_17_0. [-Wdeprecated-declarations] 239 | ierr = TaoSetHessianRoutine(_tao, nullptr, nullptr, FormHessian, &_tao_ctx); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/petsc/petsctao.h:361:87: note: declared here 361 | PETSC_DEPRECATED_FUNCTION(3, 17, 0, "TaoSetHessian()", ) static inline PetscErrorCode TaoSetHessianRoutine(Tao t, Mat H, Mat P, PetscErrorCode (*f)(Tao, Vec, Mat, Mat, void *), void *c) | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp: In static member function ‘static PetscErrorCode dolfin::PETScTAOSolver::FormHessian(Tao, Vec, Mat, Mat, void*)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp:391:47: warning: ‘PetscErrorCode TaoSetHessianRoutine(Tao, Mat, Mat, PetscErrorCode (*)(Tao, Vec, Mat, Mat, void*), void*)’ is deprecated: Use "TaoSetHessian()" (since version 3.17.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_17_0. [-Wdeprecated-declarations] 391 | PetscErrorCode ierr = TaoSetHessianRoutine(tao, nullptr, H, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 392 | nullptr, nullptr); | ~~~~~~~~~~~~~~~~~ /usr/include/petsc/petsctao.h:361:87: note: declared here 361 | PETSC_DEPRECATED_FUNCTION(3, 17, 0, "TaoSetHessian()", ) static inline PetscErrorCode TaoSetHessianRoutine(Tao t, Mat H, Mat P, PetscErrorCode (*f)(Tao, Vec, Mat, Mat, void *), void *c) | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp: In member function ‘void dolfin::PETScTAOSolver::set_ksp_options()’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp:580:77: warning: ‘PetscErrorCode KSPMonitorTrueResidualNorm(KSP, PetscInt, PetscReal, PetscViewerAndFormat*)’ is deprecated: Use "KSPMonitorTrueResidual()" (since version 3.15.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_15_0. [-Wdeprecated-declarations] 580 | (PetscErrorCode (*)(KSP,PetscInt,PetscReal,void*)) KSPMonitorTrueResidualNorm, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.h:31: /usr/include/petsc/petscksp.h:484:96: note: declared here 484 | PETSC_DEPRECATED_FUNCTION(3, 15, 0, "KSPMonitorTrueResidual()", ) static inline PetscErrorCode KSPMonitorTrueResidualNorm(KSP ksp, PetscInt n, PetscReal rnorm, PetscViewerAndFormat *vf) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o -MF CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o.d -o CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScSNESSolver.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScSNESSolver.cpp: In member function ‘void dolfin::PETScSNESSolver::set_linear_solver_parameters()’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScSNESSolver.cpp:520:79: warning: ‘PetscErrorCode KSPMonitorTrueResidualNorm(KSP, PetscInt, PetscReal, PetscViewerAndFormat*)’ is deprecated: Use "KSPMonitorTrueResidual()" (since version 3.15.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_15_0. [-Wdeprecated-declarations] 520 | (PetscErrorCode (*)(KSP,PetscInt,PetscReal,void*)) KSPMonitorTrueResidualNorm, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.h:31, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/PETScSNESSolver.cpp:35: /usr/include/petsc/petscksp.h:484:96: note: declared here 484 | PETSC_DEPRECATED_FUNCTION(3, 15, 0, "KSPMonitorTrueResidual()", ) static inline PetscErrorCode KSPMonitorTrueResidualNorm(KSP ksp, PetscInt n, PetscReal rnorm, PetscViewerAndFormat *vf) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 95%] Building CXX object dolfin/CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o -MF CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o.d -o CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/GlobalParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 95%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o -MF CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o.d -o CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp: In member function ‘std::size_t dolfin::TAOLinearBoundSolver::solve(const dolfin::PETScMatrix&, dolfin::PETScVector&, const dolfin::PETScVector&, const dolfin::PETScVector&, const dolfin::PETScVector&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp:175:29: warning: ‘PetscErrorCode TaoSetInitialVector(Tao, Vec)’ is deprecated: Use "TaoSetSolution()" (since version 3.17.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_17_0. [-Wdeprecated-declarations] 175 | ierr = TaoSetInitialVector(_tao, x.vec()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/petsc/petsc.h:32, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/common/SubSystemsManager.h:24, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScObject.h:24, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScBaseMatrix.h:37, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/la/PETScMatrix.h:41, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp:29: /usr/include/petsc/petsctao.h:328:88: note: declared here 328 | PETSC_DEPRECATED_FUNCTION(3, 17, 0, "TaoSetSolution()", ) static inline PetscErrorCode TaoSetInitialVector(Tao t, Vec v) | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp:184:43: warning: ‘PetscErrorCode TaoSetObjectiveAndGradientRoutine(Tao, PetscErrorCode (*)(Tao, Vec, PetscReal*, Vec, void*), void*)’ is deprecated: Use "TaoSetObjectiveAndGradient()" (since version 3.17.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_17_0. [-Wdeprecated-declarations] 184 | ierr = TaoSetObjectiveAndGradientRoutine(_tao, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ 185 | __TAOFormFunctionGradientQuadraticProblem, this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/petsc/petsctao.h:357:100: note: declared here 357 | PETSC_DEPRECATED_FUNCTION(3, 17, 0, "TaoSetObjectiveAndGradient()", ) static inline PetscErrorCode TaoSetObjectiveAndGradientRoutine(Tao t, PetscErrorCode (*f)(Tao, Vec, PetscReal *, Vec, void *), void *c) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp:188:30: warning: ‘PetscErrorCode TaoSetHessianRoutine(Tao, Mat, Mat, PetscErrorCode (*)(Tao, Vec, Mat, Mat, void*), void*)’ is deprecated: Use "TaoSetHessian()" (since version 3.17.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_17_0. [-Wdeprecated-declarations] 188 | ierr = TaoSetHessianRoutine(_tao, A->mat(), A->mat(), | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 189 | __TAOFormHessianQuadraticProblem, this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/petsc/petsctao.h:361:87: note: declared here 361 | PETSC_DEPRECATED_FUNCTION(3, 17, 0, "TaoSetHessian()", ) static inline PetscErrorCode TaoSetHessianRoutine(Tao t, Mat H, Mat P, PetscErrorCode (*f)(Tao, Vec, Mat, Mat, void *), void *c) | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp: In member function ‘void dolfin::TAOLinearBoundSolver::set_ksp_options()’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp:416:86: warning: ‘PetscErrorCode KSPMonitorTrueResidualNorm(KSP, PetscInt, PetscReal, PetscViewerAndFormat*)’ is deprecated: Use "KSPMonitorTrueResidual()" (since version 3.15.0) instead. Silence this warning (as well as all others for this version) by defining PETSC_SILENCE_DEPRECATION_WARNINGS_3_15_0. [-Wdeprecated-declarations] 416 | ierr = KSPMonitorSet(ksp, (PetscErrorCode (*)(KSP,PetscInt,PetscReal,void*)) KSPMonitorTrueResidualNorm, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/petsc/petscsnes.h:6, from /usr/include/petsc/petscts.h:7, from /usr/include/petsc/petsc.h:31: /usr/include/petsc/petscksp.h:484:96: note: declared here 484 | PETSC_DEPRECATED_FUNCTION(3, 15, 0, "KSPMonitorTrueResidual()", ) static inline PetscErrorCode KSPMonitorTrueResidualNorm(KSP ksp, PetscInt n, PetscReal rnorm, PetscViewerAndFormat *vf) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp: In static member function ‘static PetscErrorCode dolfin::TAOLinearBoundSolver::__TAOMonitor(Tao, void*)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp:510:54: warning: unknown conversion type character ‘\x09’ in format [-Wformat=] 510 | ierr = PetscPrintf(PETSC_COMM_WORLD,"iteration=%D\tf=%g\n", its, (double)f); | ^~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp:510:59: warning: format ‘%g’ expects argument of type ‘double’, but argument 3 has type ‘PetscInt’ {aka ‘int’} [-Wformat=] 510 | ierr = PetscPrintf(PETSC_COMM_WORLD,"iteration=%D\tf=%g\n", its, (double)f); | ~^ ~~~ | | | | | PetscInt {aka int} | double | %d /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp:510:41: warning: too many arguments for format [-Wformat-extra-args] 510 | ierr = PetscPrintf(PETSC_COMM_WORLD,"iteration=%D\tf=%g\n", its, (double)f); | ^~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 95%] Building CXX object dolfin/CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o -MF CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o.d -o CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp In file included from /usr/include/c++/14/set:62, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.h:22, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp:21: In member function ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_assign(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_tree.h:1740:21, inlined from ‘std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_set.h:304:7, inlined from ‘boost::detail::variant::move_storage::internal_visit, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, int) constvoid’ at /usr/include/boost/variant/variant.hpp:597:21, inlined from ‘boost::detail::variant::visitation_impl_invoke_impl, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, mpl_::bool_)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from ‘boost::detail::variant::visitation_impl_invoke, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, int)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from ‘boost::detail::variant::visitation_impl, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >, boost::detail::variant::move_storage, void*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, int, boost::detail::variant::move_storage&, void*, mpl_::bool_, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, mpl_::int_<0>*, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor_impl(int, int, boost::detail::variant::move_storage&, void*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2338:48, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor(boost::detail::variant::move_storage&)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2350:43, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::variant_assign(boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&&)’ at /usr/include/boost/variant/variant.hpp:2081:41, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2127:27, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2114:10, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::operator= >(std::array&&)boost::enable_if&&>, boost::mpl::not_ > >, boost::detail::variant::is_variant_constructible_from&&, boost::mpl::l_item, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, mpl_::bool_, mpl_::bool_ >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&>::type’ at /usr/include/boost/variant/variant.hpp:2146:20, inlined from ‘dolfin::Parameter::set_range(int, int)’ at /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp:100:57: /usr/include/c++/14/bits/stl_tree.h:1705:25: warning: ‘MEM[(struct _Rb_tree_node_base * &)&temp + 24]’ may be used uninitialized [-Wmaybe-uninitialized] 1705 | if (__x._M_root() != nullptr) | ~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /usr/include/boost/variant.hpp:17, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.h:26: /usr/include/boost/variant/variant.hpp: In member function ‘dolfin::Parameter::set_range(int, int)’: /usr/include/boost/variant/variant.hpp:2126:21: note: ‘temp’ declared here 2126 | variant temp( detail::variant::move(rhs) ); | ^~~~ In member function ‘std::_Rb_tree_header::_M_move_data(std::_Rb_tree_header&)’, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_data(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1417:29, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_assign(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1706:14, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_tree.h:1740:21, inlined from ‘std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_set.h:304:7, inlined from ‘boost::detail::variant::move_storage::internal_visit, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, int) constvoid’ at /usr/include/boost/variant/variant.hpp:597:21, inlined from ‘boost::detail::variant::visitation_impl_invoke_impl, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, mpl_::bool_)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from ‘boost::detail::variant::visitation_impl_invoke, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, int)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from ‘boost::detail::variant::visitation_impl, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >, boost::detail::variant::move_storage, void*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, int, boost::detail::variant::move_storage&, void*, mpl_::bool_, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, mpl_::int_<0>*, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor_impl(int, int, boost::detail::variant::move_storage&, void*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2338:48, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor(boost::detail::variant::move_storage&)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2350:43, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::variant_assign(boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&&)’ at /usr/include/boost/variant/variant.hpp:2081:41, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2127:27, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2114:10, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::operator= >(std::array&&)boost::enable_if&&>, boost::mpl::not_ > >, boost::detail::variant::is_variant_constructible_from&&, boost::mpl::l_item, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, mpl_::bool_, mpl_::bool_ >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&>::type’ at /usr/include/boost/variant/variant.hpp:2146:20, inlined from ‘dolfin::Parameter::set_range(int, int)’ at /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp:100:57: /usr/include/c++/14/bits/stl_tree.h:191:45: warning: ‘MEM[(struct _Rb_tree_header &)&temp + 16]._M_header._M_color’ may be used uninitialized [-Wmaybe-uninitialized] 191 | _M_header._M_color = __from._M_header._M_color; | ~~~~~~~~~~~~~~~~~^~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function ‘dolfin::Parameter::set_range(int, int)’: /usr/include/boost/variant/variant.hpp:2126:21: note: ‘temp’ declared here 2126 | variant temp( detail::variant::move(rhs) ); | ^~~~ In member function ‘std::_Rb_tree_header::_M_move_data(std::_Rb_tree_header&)’, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_data(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1417:29, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_assign(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1706:14, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_tree.h:1740:21, inlined from ‘std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_set.h:304:7, inlined from ‘boost::detail::variant::move_storage::internal_visit, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, int) constvoid’ at /usr/include/boost/variant/variant.hpp:597:21, inlined from ‘boost::detail::variant::visitation_impl_invoke_impl, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, mpl_::bool_)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from ‘boost::detail::variant::visitation_impl_invoke, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, int)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from ‘boost::detail::variant::visitation_impl, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >, boost::detail::variant::move_storage, void*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, int, boost::detail::variant::move_storage&, void*, mpl_::bool_, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, mpl_::int_<0>*, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor_impl(int, int, boost::detail::variant::move_storage&, void*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2338:48, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor(boost::detail::variant::move_storage&)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2350:43, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::variant_assign(boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&&)’ at /usr/include/boost/variant/variant.hpp:2081:41, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2127:27, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2114:10, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::operator= >(std::array&&)boost::enable_if&&>, boost::mpl::not_ > >, boost::detail::variant::is_variant_constructible_from&&, boost::mpl::l_item, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, mpl_::bool_, mpl_::bool_ >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&>::type’ at /usr/include/boost/variant/variant.hpp:2146:20, inlined from ‘dolfin::Parameter::set_range(int, int)’ at /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp:100:57: /usr/include/c++/14/bits/stl_tree.h:193:44: warning: ‘MEM[(struct _Rb_tree_header &)&temp + 16]._M_header._M_left’ may be used uninitialized [-Wmaybe-uninitialized] 193 | _M_header._M_left = __from._M_header._M_left; | ~~~~~~~~~~~~~~~~~^~~~~~~ /usr/include/boost/variant/variant.hpp: In member function ‘dolfin::Parameter::set_range(int, int)’: /usr/include/boost/variant/variant.hpp:2126:21: note: ‘temp’ declared here 2126 | variant temp( detail::variant::move(rhs) ); | ^~~~ In member function ‘std::_Rb_tree_header::_M_move_data(std::_Rb_tree_header&)’, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_data(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1417:29, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_assign(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1706:14, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_tree.h:1740:21, inlined from ‘std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_set.h:304:7, inlined from ‘boost::detail::variant::move_storage::internal_visit, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, int) constvoid’ at /usr/include/boost/variant/variant.hpp:597:21, inlined from ‘boost::detail::variant::visitation_impl_invoke_impl, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, mpl_::bool_)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from ‘boost::detail::variant::visitation_impl_invoke, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, int)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from ‘boost::detail::variant::visitation_impl, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >, boost::detail::variant::move_storage, void*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, int, boost::detail::variant::move_storage&, void*, mpl_::bool_, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, mpl_::int_<0>*, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor_impl(int, int, boost::detail::variant::move_storage&, void*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2338:48, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor(boost::detail::variant::move_storage&)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2350:43, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::variant_assign(boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&&)’ at /usr/include/boost/variant/variant.hpp:2081:41, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2127:27, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2114:10, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::operator= >(std::array&&)boost::enable_if&&>, boost::mpl::not_ > >, boost::detail::variant::is_variant_constructible_from&&, boost::mpl::l_item, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, mpl_::bool_, mpl_::bool_ >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&>::type’ at /usr/include/boost/variant/variant.hpp:2146:20, inlined from ‘dolfin::Parameter::set_range(int, int)’ at /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp:100:57: /usr/include/c++/14/bits/stl_tree.h:194:45: warning: ‘MEM[(struct _Rb_tree_header &)&temp + 16]._M_header._M_right’ may be used uninitialized [-Wmaybe-uninitialized] 194 | _M_header._M_right = __from._M_header._M_right; | ~~~~~~~~~~~~~~~~~^~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function ‘dolfin::Parameter::set_range(int, int)’: /usr/include/boost/variant/variant.hpp:2126:21: note: ‘temp’ declared here 2126 | variant temp( detail::variant::move(rhs) ); | ^~~~ In member function ‘std::_Rb_tree_header::_M_move_data(std::_Rb_tree_header&)’, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_data(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1417:29, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_assign(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1706:14, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_tree.h:1740:21, inlined from ‘std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_set.h:304:7, inlined from ‘boost::detail::variant::move_storage::internal_visit, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, int) constvoid’ at /usr/include/boost/variant/variant.hpp:597:21, inlined from ‘boost::detail::variant::visitation_impl_invoke_impl, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, mpl_::bool_)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from ‘boost::detail::variant::visitation_impl_invoke, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, int)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from ‘boost::detail::variant::visitation_impl, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >, boost::detail::variant::move_storage, void*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, int, boost::detail::variant::move_storage&, void*, mpl_::bool_, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, mpl_::int_<0>*, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor_impl(int, int, boost::detail::variant::move_storage&, void*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2338:48, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor(boost::detail::variant::move_storage&)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2350:43, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::variant_assign(boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&&)’ at /usr/include/boost/variant/variant.hpp:2081:41, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2127:27, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2114:10, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::operator= >(std::array&&)boost::enable_if&&>, boost::mpl::not_ > >, boost::detail::variant::is_variant_constructible_from&&, boost::mpl::l_item, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, mpl_::bool_, mpl_::bool_ >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&>::type’ at /usr/include/boost/variant/variant.hpp:2146:20, inlined from ‘dolfin::Parameter::set_range(int, int)’ at /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp:100:57: /usr/include/c++/14/bits/stl_tree.h:196:30: warning: ‘MEM[(struct _Rb_tree_header &)&temp + 16]._M_node_count’ may be used uninitialized [-Wmaybe-uninitialized] 196 | _M_node_count = __from._M_node_count; | ~~~~~~~^~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function ‘dolfin::Parameter::set_range(int, int)’: /usr/include/boost/variant/variant.hpp:2126:21: note: ‘temp’ declared here 2126 | variant temp( detail::variant::move(rhs) ); | ^~~~ In member function ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_assign(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_tree.h:1740:21, inlined from ‘std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_set.h:304:7, inlined from ‘boost::detail::variant::move_storage::internal_visit, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, int) constvoid’ at /usr/include/boost/variant/variant.hpp:597:21, inlined from ‘boost::detail::variant::visitation_impl_invoke_impl, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, mpl_::bool_)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from ‘boost::detail::variant::visitation_impl_invoke, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, int)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from ‘boost::detail::variant::visitation_impl, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >, boost::detail::variant::move_storage, void*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, int, boost::detail::variant::move_storage&, void*, mpl_::bool_, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, mpl_::int_<0>*, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor_impl(int, int, boost::detail::variant::move_storage&, void*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2338:48, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor(boost::detail::variant::move_storage&)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2350:43, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::variant_assign(boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&&)’ at /usr/include/boost/variant/variant.hpp:2081:41, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2127:27, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2114:10, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::operator= >(std::array&&)boost::enable_if&&>, boost::mpl::not_ > >, boost::detail::variant::is_variant_constructible_from&&, boost::mpl::l_item, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, mpl_::bool_, mpl_::bool_ >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&>::type’ at /usr/include/boost/variant/variant.hpp:2146:20, inlined from ‘dolfin::Parameter::set_range(double, double)’ at /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp:113:60: /usr/include/c++/14/bits/stl_tree.h:1705:25: warning: ‘MEM[(struct _Rb_tree_node_base * &)&temp + 24]’ may be used uninitialized [-Wmaybe-uninitialized] 1705 | if (__x._M_root() != nullptr) | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function ‘dolfin::Parameter::set_range(double, double)’: /usr/include/boost/variant/variant.hpp:2126:21: note: ‘temp’ declared here 2126 | variant temp( detail::variant::move(rhs) ); | ^~~~ In member function ‘std::_Rb_tree_header::_M_move_data(std::_Rb_tree_header&)’, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_data(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1417:29, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_assign(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1706:14, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_tree.h:1740:21, inlined from ‘std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_set.h:304:7, inlined from ‘boost::detail::variant::move_storage::internal_visit, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, int) constvoid’ at /usr/include/boost/variant/variant.hpp:597:21, inlined from ‘boost::detail::variant::visitation_impl_invoke_impl, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, mpl_::bool_)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from ‘boost::detail::variant::visitation_impl_invoke, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, int)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from ‘boost::detail::variant::visitation_impl, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >, boost::detail::variant::move_storage, void*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, int, boost::detail::variant::move_storage&, void*, mpl_::bool_, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, mpl_::int_<0>*, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor_impl(int, int, boost::detail::variant::move_storage&, void*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2338:48, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor(boost::detail::variant::move_storage&)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2350:43, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::variant_assign(boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&&)’ at /usr/include/boost/variant/variant.hpp:2081:41, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2127:27, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2114:10, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::operator= >(std::array&&)boost::enable_if&&>, boost::mpl::not_ > >, boost::detail::variant::is_variant_constructible_from&&, boost::mpl::l_item, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, mpl_::bool_, mpl_::bool_ >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&>::type’ at /usr/include/boost/variant/variant.hpp:2146:20, inlined from ‘dolfin::Parameter::set_range(double, double)’ at /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp:113:60: /usr/include/c++/14/bits/stl_tree.h:193:44: warning: ‘MEM[(struct _Rb_tree_header &)&temp + 16]._M_header._M_left’ may be used uninitialized [-Wmaybe-uninitialized] 193 | _M_header._M_left = __from._M_header._M_left; | ~~~~~~~~~~~~~~~~~^~~~~~~ /usr/include/boost/variant/variant.hpp: In member function ‘dolfin::Parameter::set_range(double, double)’: /usr/include/boost/variant/variant.hpp:2126:21: note: ‘temp’ declared here 2126 | variant temp( detail::variant::move(rhs) ); | ^~~~ In member function ‘std::_Rb_tree_header::_M_move_data(std::_Rb_tree_header&)’, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_data(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1417:29, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_assign(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1706:14, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_tree.h:1740:21, inlined from ‘std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_set.h:304:7, inlined from ‘boost::detail::variant::move_storage::internal_visit, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, int) constvoid’ at /usr/include/boost/variant/variant.hpp:597:21, inlined from ‘boost::detail::variant::visitation_impl_invoke_impl, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, mpl_::bool_)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from ‘boost::detail::variant::visitation_impl_invoke, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, int)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from ‘boost::detail::variant::visitation_impl, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >, boost::detail::variant::move_storage, void*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, int, boost::detail::variant::move_storage&, void*, mpl_::bool_, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, mpl_::int_<0>*, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor_impl(int, int, boost::detail::variant::move_storage&, void*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2338:48, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor(boost::detail::variant::move_storage&)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2350:43, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::variant_assign(boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&&)’ at /usr/include/boost/variant/variant.hpp:2081:41, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2127:27, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2114:10, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::operator= >(std::array&&)boost::enable_if&&>, boost::mpl::not_ > >, boost::detail::variant::is_variant_constructible_from&&, boost::mpl::l_item, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, mpl_::bool_, mpl_::bool_ >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&>::type’ at /usr/include/boost/variant/variant.hpp:2146:20, inlined from ‘dolfin::Parameter::set_range(double, double)’ at /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp:113:60: /usr/include/c++/14/bits/stl_tree.h:194:45: warning: ‘MEM[(struct _Rb_tree_header &)&temp + 16]._M_header._M_right’ may be used uninitialized [-Wmaybe-uninitialized] 194 | _M_header._M_right = __from._M_header._M_right; | ~~~~~~~~~~~~~~~~~^~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function ‘dolfin::Parameter::set_range(double, double)’: /usr/include/boost/variant/variant.hpp:2126:21: note: ‘temp’ declared here 2126 | variant temp( detail::variant::move(rhs) ); | ^~~~ In member function ‘std::_Rb_tree_header::_M_move_data(std::_Rb_tree_header&)’, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_data(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1417:29, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::_M_move_assign(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, std::integral_constant)’ at /usr/include/c++/14/bits/stl_tree.h:1706:14, inlined from ‘std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::_Rb_tree, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::_Identity, std::allocator > >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_tree.h:1740:21, inlined from ‘std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >::operator=(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&&)’ at /usr/include/c++/14/bits/stl_set.h:304:7, inlined from ‘boost::detail::variant::move_storage::internal_visit, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >&, int) constvoid’ at /usr/include/boost/variant/variant.hpp:597:21, inlined from ‘boost::detail::variant::visitation_impl_invoke_impl, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, mpl_::bool_)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:117:34, inlined from ‘boost::detail::variant::visitation_impl_invoke, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, boost::detail::variant::move_storage&, void*, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, int)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:157:41, inlined from ‘boost::detail::variant::visitation_impl, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >, boost::detail::variant::move_storage, void*, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_>(int, int, boost::detail::variant::move_storage&, void*, mpl_::bool_, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::has_fallback_type_, mpl_::int_<0>*, boost::detail::variant::visitation_impl_step, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, boost::mpl::l_iter >*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/detail/visitation_impl.hpp:238:5, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor_impl(int, int, boost::detail::variant::move_storage&, void*)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2338:48, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::internal_apply_visitor(boost::detail::variant::move_storage&)boost::detail::variant::move_storage::result_type’ at /usr/include/boost/variant/variant.hpp:2350:43, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::variant_assign(boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&&)’ at /usr/include/boost/variant/variant.hpp:2081:41, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2127:27, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::move_assign >(std::array&&)void’ at /usr/include/boost/variant/variant.hpp:2114:10, inlined from ‘boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >::operator= >(std::array&&)boost::enable_if&&>, boost::mpl::not_ > >, boost::detail::variant::is_variant_constructible_from&&, boost::mpl::l_item, boost::blank, boost::mpl::l_item, std::array, boost::mpl::l_item, std::array, boost::mpl::l_item, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > >, boost::mpl::l_end> > > > >, mpl_::bool_, mpl_::bool_ >, boost::variant, std::array, std::set, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > > > >&>::type’ at /usr/include/boost/variant/variant.hpp:2146:20, inlined from ‘dolfin::Parameter::set_range(double, double)’ at /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp:113:60: /usr/include/c++/14/bits/stl_tree.h:196:30: warning: ‘MEM[(struct _Rb_tree_header &)&temp + 16]._M_node_count’ may be used uninitialized [-Wmaybe-uninitialized] 196 | _M_node_count = __from._M_node_count; | ~~~~~~~^~~~~~~~~~~~~ /usr/include/boost/variant/variant.hpp: In member function ‘dolfin::Parameter::set_range(double, double)’: /usr/include/boost/variant/variant.hpp:2126:21: note: ‘temp’ declared here 2126 | make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' variant temp( detail::variant::move(rhs) ); | ^~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 96%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o -MF CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/refinement/BisectionRefinement1D.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 96%] Building CXX object dolfin/CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o -MF CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o.d -o CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/parameter/Parameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 96%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o -MF CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/refinement/LocalMeshCoarsening.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 96%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o -MF CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/refinement/ParallelRefinement.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 98%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o -MF CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/refinement/PlazaRefinementND.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 98%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/refine.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/refine.cpp.o -MF CMakeFiles/dolfin.dir/refinement/refine.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/refine.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/refinement/refine.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [100%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ts/CVode.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/ts/CVode.cpp.o -MF CMakeFiles/dolfin.dir/ts/CVode.cpp.o.d -o CMakeFiles/dolfin.dir/ts/CVode.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/ts/CVode.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 98%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -std=c++11 -fPIC -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o -MF CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/refinement/RegularCutRefinement.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/refinement/RegularCutRefinement.cpp: In static member function ‘static void dolfin::RegularCutRefinement::refine_marked(dolfin::Mesh&, const dolfin::Mesh&, const std::vector&, const dolfin::IndexSet&)’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/refinement/RegularCutRefinement.cpp:323:19: warning: unused variable ‘twin_marker’ [-Wunused-variable] 323 | const int twin_marker = refinement_markers[bisection_twin]; | ^~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [100%] Linking CXX shared library libdolfin.so cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfin.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libdolfin.so.2019.1 -o 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CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o CMakeFiles/dolfin.dir/common/utils.cpp.o CMakeFiles/dolfin.dir/common/Variable.cpp.o CMakeFiles/dolfin.dir/fem/assemble.cpp.o CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o CMakeFiles/dolfin.dir/fem/Assembler.cpp.o CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o CMakeFiles/dolfin.dir/fem/DofMap.cpp.o CMakeFiles/dolfin.dir/fem/Equation.cpp.o CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o CMakeFiles/dolfin.dir/fem/Form.cpp.o CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o 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CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o CMakeFiles/dolfin.dir/refinement/refine.cpp.o CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o CMakeFiles/dolfin.dir/ts/CVode.cpp.o /usr/lib64/libboost_timer.so /usr/lib64/libboost_filesystem.so /usr/lib64/libboost_program_options.so /usr/lib64/libboost_iostreams.so /lib64/libhdf5.so /lib64/libz.so /usr/lib64/libboost_regex.so /usr/lib64/libpetsc.so cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/cmake -E cmake_symlink_library libdolfin.so.2019.1.0 libdolfin.so.2019.1 libdolfin.so make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [100%] Built target dolfin make[1]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/CMakeFiles 0 ++ python3 -c 'import ffc; print(ffc.get_include_path())' + ffc_path=/usr/lib/python3.13/site-packages/ffc/backends/ufc ++ pkgconf --cflags eigen3 + eigen_options=-I/usr/include/eigen3 + sed -r -i 's|Cflags:.*|\0 -I/usr/lib/python3.13/site-packages/ffc/backends/ufc -I/usr/include/eigen3|' dolfin.pc + /usr/bin/make install DESTDIR=/builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT 'INSTALL=/usr/bin/install -p' /usr/bin/cmake -S/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -B/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/CMakeFiles /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/depend make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/ale /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin/ale /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin/ale/CMakeFiles/compile_ale_forms.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/build make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Nothing to be done for 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directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/build make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Nothing to be done for 'dolfin/CMakeFiles/dolfin.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [100%] Built target dolfin make[1]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory 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Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/la/test_nullspace.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/la/TpetraFactory.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/la/TpetraMatrix.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/la/TpetraVector.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/la/TrilinosParameters.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/la/TrilinosPreconditioner.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/la/Vector.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/la/VectorSpaceBasis.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/log/dolfin_log.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/log/Event.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/log/Logger.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/log/log.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/log/LogLevel.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/log/LogManager.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/log/LogStream.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/log/Progress.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/log/Table.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/math/basic.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/math/dolfin_math.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/math/Lagrange.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/math/Legendre.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/BoundaryComputation.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/BoundaryMesh.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/Cell.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/CellType.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/DistributedMeshTools.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/dolfin_mesh.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/DomainBoundary.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/DynamicMeshEditor.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/Edge.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/Face.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/FacetCell.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/Facet.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/HexahedronCell.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/IntervalCell.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/LocalMeshData.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/LocalMeshValueCollection.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshColoring.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshConnectivity.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshData.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshDomains.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshEditor.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshEntity.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshEntityIteratorBase.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshEntityIterator.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshFunction.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshGeometry.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/Mesh.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshHierarchy.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshOrdering.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshPartitioning.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshQuality.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshRelation.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshRenumbering.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshSmoothing.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshTopology.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshTransformation.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MeshValueCollection.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/MultiMesh.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/PeriodicBoundaryComputation.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/PointCell.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/QuadrilateralCell.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/SubDomain.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/SubMesh.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/SubsetIterator.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/TetrahedronCell.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/TopologyComputation.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/TriangleCell.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/mesh/Vertex.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/multistage/dolfin_multistage.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/multistage/MultiStageScheme.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/multistage/PointIntegralSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/multistage/RKSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/dolfin_nls.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/NewtonSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/NonlinearProblem.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/OptimisationProblem.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/PETScSNESSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/PETScTAOSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/TAOLinearBoundSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/parameter/dolfin_parameter.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/parameter/GlobalParameters.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/parameter/Parameter.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/parameter/Parameters.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/BisectionRefinement1D.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/dolfin_refinement.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/LocalMeshCoarsening.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/ParallelRefinement.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/PlazaRefinementND.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/refine.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/RegularCutRefinement.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/ts/dolfin_ts.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/ts/CVode.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/libdolfin.so.2019.1.0 -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/libdolfin.so.2019.1 -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/libdolfin.so -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/DOLFINTargets.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/DOLFINTargets-relwithdebinfo.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/FindPETSc.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/FindSLEPc.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/DOLFINConfig.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/DOLFINConfigVersion.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/UseDOLFIN.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/pkgconfig/dolfin.pc ---------------------------------------------------------------------------- DOLFIN has now been installed in /usr and the demo programs have been installed in /usr/share/dolfin/demo Before rushing off to try the demos, don't forget to update your environment variables. This can be done easily using the helper file 'dolfin.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/share/dolfin/dolfin.conf For future reference, we recommend that you add this command to your configuration (.bashrc, .profile or similar). ---------------------------------------------------------------------------- + cd ../python + VERBOSE=1 + CMAKE_PREFIX_PATH=/builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake + CMAKE_SKIP_INSTALL_RPATH=yes + CMAKE_SKIP_RPATH=yes + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-unused-variable -DH5_USE_110_API' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' running build running build_py creating build creating build/lib.linux-s390x-cpython-313 creating build/lib.linux-s390x-cpython-313/dolfin copying dolfin/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin creating build/lib.linux-s390x-cpython-313/dolfin/common copying dolfin/common/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin/common copying dolfin/common/plotting.py -> build/lib.linux-s390x-cpython-313/dolfin/common copying dolfin/common/timer.py -> build/lib.linux-s390x-cpython-313/dolfin/common creating build/lib.linux-s390x-cpython-313/dolfin/function copying dolfin/function/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin/function copying dolfin/function/argument.py -> build/lib.linux-s390x-cpython-313/dolfin/function copying dolfin/function/constant.py -> build/lib.linux-s390x-cpython-313/dolfin/function copying dolfin/function/expression.py -> build/lib.linux-s390x-cpython-313/dolfin/function copying dolfin/function/function.py -> build/lib.linux-s390x-cpython-313/dolfin/function copying dolfin/function/functionspace.py -> build/lib.linux-s390x-cpython-313/dolfin/function copying dolfin/function/jit.py -> build/lib.linux-s390x-cpython-313/dolfin/function copying dolfin/function/multimeshfunction.py -> build/lib.linux-s390x-cpython-313/dolfin/function copying dolfin/function/multimeshfunctionspace.py -> build/lib.linux-s390x-cpython-313/dolfin/function copying dolfin/function/specialfunctions.py -> build/lib.linux-s390x-cpython-313/dolfin/function creating build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/adaptivesolving.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/assembling.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/dirichletbc.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/errorcontrolgenerator.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/form.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/formmanipulations.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/interpolation.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/multimeshdirichletbc.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/norms.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/problem.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/projection.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/solvers.py -> build/lib.linux-s390x-cpython-313/dolfin/fem copying dolfin/fem/solving.py -> build/lib.linux-s390x-cpython-313/dolfin/fem creating build/lib.linux-s390x-cpython-313/dolfin/la copying dolfin/la/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin/la copying dolfin/la/solver.py -> build/lib.linux-s390x-cpython-313/dolfin/la creating build/lib.linux-s390x-cpython-313/dolfin/io copying dolfin/io/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin/io creating build/lib.linux-s390x-cpython-313/dolfin/jit copying dolfin/jit/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin/jit copying dolfin/jit/jit.py -> build/lib.linux-s390x-cpython-313/dolfin/jit copying dolfin/jit/pybind11jit.py -> build/lib.linux-s390x-cpython-313/dolfin/jit creating build/lib.linux-s390x-cpython-313/dolfin/mesh copying dolfin/mesh/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin/mesh copying dolfin/mesh/ale.py -> build/lib.linux-s390x-cpython-313/dolfin/mesh copying dolfin/mesh/meshfunction.py -> build/lib.linux-s390x-cpython-313/dolfin/mesh copying dolfin/mesh/meshvaluecollection.py -> build/lib.linux-s390x-cpython-313/dolfin/mesh copying dolfin/mesh/subdomain.py -> build/lib.linux-s390x-cpython-313/dolfin/mesh copying dolfin/mesh/svgtools.py -> build/lib.linux-s390x-cpython-313/dolfin/mesh copying dolfin/mesh/ufl_util.py -> build/lib.linux-s390x-cpython-313/dolfin/mesh creating build/lib.linux-s390x-cpython-313/dolfin/multistage copying dolfin/multistage/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin/multistage copying dolfin/multistage/factorize.py -> build/lib.linux-s390x-cpython-313/dolfin/multistage copying dolfin/multistage/multistagescheme.py -> build/lib.linux-s390x-cpython-313/dolfin/multistage copying dolfin/multistage/multistagesolvers.py -> build/lib.linux-s390x-cpython-313/dolfin/multistage copying dolfin/multistage/rushlarsenschemes.py -> build/lib.linux-s390x-cpython-313/dolfin/multistage creating build/lib.linux-s390x-cpython-313/dolfin/parameter copying dolfin/parameter/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin/parameter creating build/lib.linux-s390x-cpython-313/dolfin_utils creating build/lib.linux-s390x-cpython-313/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/abaqus.py -> build/lib.linux-s390x-cpython-313/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/meshconvert.py -> build/lib.linux-s390x-cpython-313/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/xml_writer.py -> build/lib.linux-s390x-cpython-313/dolfin_utils/meshconvert creating build/lib.linux-s390x-cpython-313/dolfin_utils/test copying dolfin_utils/test/__init__.py -> build/lib.linux-s390x-cpython-313/dolfin_utils/test copying dolfin_utils/test/fixtures.py -> build/lib.linux-s390x-cpython-313/dolfin_utils/test copying dolfin_utils/test/paths.py -> build/lib.linux-s390x-cpython-313/dolfin_utils/test copying dolfin_utils/test/skips.py -> build/lib.linux-s390x-cpython-313/dolfin_utils/test creating build/lib.linux-s390x-cpython-313/fenics copying fenics/__init__.py -> build/lib.linux-s390x-cpython-313/fenics running build_ext Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.1 -- The CXX compiler identification is GNU 14.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at /usr/share/cmake/pybind11/FindPythonLibsNew.cmake:101 (message): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning, or preferably upgrade to using FindPython, either by calling it explicitly before pybind11, or by setting PYBIND11_FINDPYTHON ON before pybind11. Call Stack (most recent call first): /usr/share/cmake/pybind11/pybind11Tools.cmake:50 (find_package) /usr/share/cmake/pybind11/pybind11Common.cmake:202 (include) /usr/share/cmake/pybind11/pybind11Config.cmake:250 (include) CMakeLists.txt:21 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13", minimum required is "3.7") -- Found PythonLibs: /usr/lib64/libpython3.13.so -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.13.1") -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Checking for one of the modules 'craypetsc_real;PETSc' -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of PetscInt -- Check size of PetscInt - done -- Checking for package 'PETSc4Py' -- PETSc4py could not be found. Be sure to set PYTHONPATH appropriately. (missing: PETSC4PY_INCLUDE_DIRS PETSC4PY_VERSION) Traceback (most recent call last): File "", line 1, in import mpi4py; print(mpi4py.get_include()) ^^^^^^^^^^^^^ ModuleNotFoundError: No module named 'mpi4py' -- Could NOT find MPI4PY (missing: MPI4PY_INCLUDE_DIR) -- Configuring done (1.2s) jfa: mpi4py not found -- Generating done (0.0s) -- Build files have been written to: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313 Change Dir: '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j1 /usr/bin/cmake -S/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python -B/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313/CMakeFiles /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313' cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313 /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313 /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313' [ 4%] Building CXX object CMakeFiles/cpp.dir/src/dolfin.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/dolfin.cpp.o -MF CMakeFiles/cpp.dir/src/dolfin.cpp.o.d -o CMakeFiles/cpp.dir/src/dolfin.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/dolfin.cpp [ 9%] Building CXX object CMakeFiles/cpp.dir/src/parameter.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/parameter.cpp.o -MF CMakeFiles/cpp.dir/src/parameter.cpp.o.d -o CMakeFiles/cpp.dir/src/parameter.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/parameter.cpp [ 14%] Building CXX object CMakeFiles/cpp.dir/src/adaptivity.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/adaptivity.cpp.o -MF CMakeFiles/cpp.dir/src/adaptivity.cpp.o.d -o CMakeFiles/cpp.dir/src/adaptivity.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/adaptivity.cpp [ 19%] Building CXX object CMakeFiles/cpp.dir/src/ale.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/ale.cpp.o -MF CMakeFiles/cpp.dir/src/ale.cpp.o.d -o CMakeFiles/cpp.dir/src/ale.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/ale.cpp [ 23%] Building CXX object CMakeFiles/cpp.dir/src/common.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/common.cpp.o -MF CMakeFiles/cpp.dir/src/common.cpp.o.d -o CMakeFiles/cpp.dir/src/common.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/common.cpp [ 28%] Building CXX object CMakeFiles/cpp.dir/src/fem.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/fem.cpp.o -MF CMakeFiles/cpp.dir/src/fem.cpp.o.d -o CMakeFiles/cpp.dir/src/fem.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/fem.cpp [ 33%] Building CXX object CMakeFiles/cpp.dir/src/function.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/function.cpp.o -MF CMakeFiles/cpp.dir/src/function.cpp.o.d -o CMakeFiles/cpp.dir/src/function.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/function.cpp [ 38%] Building CXX object CMakeFiles/cpp.dir/src/generation.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/generation.cpp.o -MF CMakeFiles/cpp.dir/src/generation.cpp.o.d -o CMakeFiles/cpp.dir/src/generation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/generation.cpp [ 42%] Building CXX object CMakeFiles/cpp.dir/src/geometry.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/geometry.cpp.o -MF CMakeFiles/cpp.dir/src/geometry.cpp.o.d -o CMakeFiles/cpp.dir/src/geometry.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/geometry.cpp [ 47%] Building CXX object CMakeFiles/cpp.dir/src/graph.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/graph.cpp.o -MF CMakeFiles/cpp.dir/src/graph.cpp.o.d -o CMakeFiles/cpp.dir/src/graph.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/graph.cpp [ 52%] Building CXX object CMakeFiles/cpp.dir/src/log.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/log.cpp.o -MF CMakeFiles/cpp.dir/src/log.cpp.o.d -o CMakeFiles/cpp.dir/src/log.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/log.cpp [ 57%] Building CXX object CMakeFiles/cpp.dir/src/math.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/math.cpp.o -MF CMakeFiles/cpp.dir/src/math.cpp.o.d -o CMakeFiles/cpp.dir/src/math.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/math.cpp [ 61%] Building CXX object CMakeFiles/cpp.dir/src/mesh.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/mesh.cpp.o -MF CMakeFiles/cpp.dir/src/mesh.cpp.o.d -o CMakeFiles/cpp.dir/src/mesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/mesh.cpp In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/BoundaryMesh.h:28, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/mesh.cpp:27: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h: In instantiation of ‘dolfin::MeshFunction::MeshFunction(std::shared_ptr, std::size_t, const dolfin::MeshDomains&) [with T = bool; std::size_t = long unsigned int]’: /usr/include/pybind11/detail/init.h:76:12: required from ‘Class* pybind11::detail::initimpl::construct_or_initialize(Args&& ...) [with Class = dolfin::MeshFunction; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; typename std::enable_if::value, int>::type = 0]’ 76 | return new Class(std::forward(args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pybind11/detail/init.h:206:70: required from ‘static void pybind11::detail::initimpl::constructor::execute(Class&, const Extra& ...) [with Class = pybind11::class_, std::shared_ptr >, dolfin::Variable>; Extra = {}; typename std::enable_if<(! Class::has_alias), int>::type = 0; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}]’ 206 | v_h.value_ptr() = construct_or_initialize>(std::forward(args)...); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pybind11/pybind11.h:1707:21: required from ‘pybind11::class_& pybind11::class_::def(const pybind11::detail::initimpl::constructor&, const Extra& ...) [with Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; Extra = {}; type_ = dolfin::MeshFunction; options = {std::shared_ptr >, dolfin::Variable}]’ 1707 | init.execute(*this, extra...); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/mesh.cpp:429:5: required from here 391 | py::class_, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 | std::shared_ptr>, dolfin::Variable> \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 | (m, "MeshFunction"#SCALAR_NAME, "DOLFIN MeshFunction object") \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 | .def(py::init([](std::shared_ptr mesh, std::size_t dim) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 | { return dolfin::MeshFunction(mesh, dim, 0); })) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 | .def(py::init, std::size_t, SCALAR>()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 | .def(py::init, std::string>()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 | .def(py::init, std::size_t, const dolfin::MeshDomains&>()) \ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h:398:23: warning: unused variable ‘D’ [-Wunused-variable] 398 | const std::size_t D = _mesh->topology().dim(); | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h: In instantiation of ‘dolfin::MeshFunction::MeshFunction(std::shared_ptr, std::size_t, const dolfin::MeshDomains&) [with T = int; std::size_t = long unsigned int]’: /usr/include/pybind11/detail/init.h:76:12: required from ‘Class* pybind11::detail::initimpl::construct_or_initialize(Args&& ...) [with Class = dolfin::MeshFunction; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; typename std::enable_if::value, int>::type = 0]’ 76 | return new Class(std::forward(args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pybind11/detail/init.h:206:70: required from ‘static void pybind11::detail::initimpl::constructor::execute(Class&, const Extra& ...) [with Class = pybind11::class_, std::shared_ptr >, dolfin::Variable>; Extra = {}; typename std::enable_if<(! Class::has_alias), int>::type = 0; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}]’ 206 | v_h.value_ptr() = construct_or_initialize>(std::forward(args)...); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pybind11/pybind11.h:1707:21: required from ‘pybind11::class_& pybind11::class_::def(const pybind11::detail::initimpl::constructor&, const Extra& ...) [with Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; Extra = {}; type_ = dolfin::MeshFunction; options = {std::shared_ptr >, dolfin::Variable}]’ 1707 | init.execute(*this, extra...); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/mesh.cpp:430:5: required from here 391 | py::class_, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 | std::shared_ptr>, dolfin::Variable> \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 | (m, "MeshFunction"#SCALAR_NAME, "DOLFIN MeshFunction object") \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 | .def(py::init([](std::shared_ptr mesh, std::size_t dim) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 | { return dolfin::MeshFunction(mesh, dim, 0); })) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 | .def(py::init, std::size_t, SCALAR>()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 | .def(py::init, std::string>()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 | .def(py::init, std::size_t, const dolfin::MeshDomains&>()) \ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h:398:23: warning: unused variable ‘D’ [-Wunused-variable] 398 | const std::size_t D = _mesh->topology().dim(); | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h: In instantiation of ‘dolfin::MeshFunction::MeshFunction(std::shared_ptr, std::size_t, const dolfin::MeshDomains&) [with T = double; std::size_t = long unsigned int]’: /usr/include/pybind11/detail/init.h:76:12: required from ‘Class* pybind11::detail::initimpl::construct_or_initialize(Args&& ...) [with Class = dolfin::MeshFunction; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; typename std::enable_if::value, int>::type = 0]’ 76 | return new Class(std::forward(args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pybind11/detail/init.h:206:70: required from ‘static void pybind11::detail::initimpl::constructor::execute(Class&, const Extra& ...) [with Class = pybind11::class_, std::shared_ptr >, dolfin::Variable>; Extra = {}; typename std::enable_if<(! Class::has_alias), int>::type = 0; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}]’ 206 | v_h.value_ptr() = construct_or_initialize>(std::forward(args)...); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pybind11/pybind11.h:1707:21: required from ‘pybind11::class_& pybind11::class_::def(const pybind11::detail::initimpl::constructor&, const Extra& ...) [with Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; Extra = {}; type_ = dolfin::MeshFunction; options = {std::shared_ptr >, dolfin::Variable}]’ 1707 | init.execute(*this, extra...); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/mesh.cpp:431:5: required from here 391 | py::class_, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 | std::shared_ptr>, dolfin::Variable> \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 | (m, "MeshFunction"#SCALAR_NAME, "DOLFIN MeshFunction object") \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 | .def(py::init([](std::shared_ptr mesh, std::size_t dim) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 | { return dolfin::MeshFunction(mesh, dim, 0); })) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 | .def(py::init, std::size_t, SCALAR>()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 | .def(py::init, std::string>()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 | .def(py::init, std::size_t, const dolfin::MeshDomains&>()) \ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h:398:23: warning: unused variable ‘D’ [-Wunused-variable] 398 | const std::size_t D = _mesh->topology().dim(); | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h: In instantiation of ‘dolfin::MeshFunction::MeshFunction(std::shared_ptr, std::size_t, const dolfin::MeshDomains&) [with T = long unsigned int; std::size_t = long unsigned int]’: /usr/include/pybind11/detail/init.h:76:12: required from ‘Class* pybind11::detail::initimpl::construct_or_initialize(Args&& ...) [with Class = dolfin::MeshFunction; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; typename std::enable_if::value, int>::type = 0]’ 76 | return new Class(std::forward(args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pybind11/detail/init.h:206:70: required from ‘static void pybind11::detail::initimpl::constructor::execute(Class&, const Extra& ...) [with Class = pybind11::class_, std::shared_ptr >, dolfin::Variable>; Extra = {}; typename std::enable_if<(! Class::has_alias), int>::type = 0; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}]’ 206 | v_h.value_ptr() = construct_or_initialize>(std::forward(args)...); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pybind11/pybind11.h:1707:21: required from ‘pybind11::class_& pybind11::class_::def(const pybind11::detail::initimpl::constructor&, const Extra& ...) [with Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; Extra = {}; type_ = dolfin::MeshFunction; options = {std::shared_ptr >, dolfin::Variable}]’ 1707 | init.execute(*this, extra...); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/mesh.cpp:432:5: required from here 391 | py::class_, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 | std::shared_ptr>, dolfin::Variable> \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 | (m, "MeshFunction"#SCALAR_NAME, "DOLFIN MeshFunction object") \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 | .def(py::init([](std::shared_ptr mesh, std::size_t dim) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 | { return dolfin::MeshFunction(mesh, dim, 0); })) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 | .def(py::init, std::size_t, SCALAR>()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 | .def(py::init, std::string>()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 | .def(py::init, std::size_t, const dolfin::MeshDomains&>()) \ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h:398:23: warning: unused variable ‘D’ [-Wunused-variable] 398 | const std::size_t D = _mesh->topology().dim(); | ^ [ 66%] Building CXX object CMakeFiles/cpp.dir/src/multistage.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/multistage.cpp.o -MF CMakeFiles/cpp.dir/src/multistage.cpp.o.d -o CMakeFiles/cpp.dir/src/multistage.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/multistage.cpp [ 71%] Building CXX object CMakeFiles/cpp.dir/src/ts.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/ts.cpp.o -MF CMakeFiles/cpp.dir/src/ts.cpp.o.d -o CMakeFiles/cpp.dir/src/ts.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/ts.cpp [ 76%] Building CXX object CMakeFiles/cpp.dir/src/io.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/io.cpp.o -MF CMakeFiles/cpp.dir/src/io.cpp.o.d -o CMakeFiles/cpp.dir/src/io.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/io.cpp In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.h:30, from /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/io.cpp:26: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ [ 80%] Building CXX object CMakeFiles/cpp.dir/src/la.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/la.cpp.o -MF CMakeFiles/cpp.dir/src/la.cpp.o.d -o CMakeFiles/cpp.dir/src/la.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/la.cpp [ 85%] Building CXX object CMakeFiles/cpp.dir/src/nls.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/nls.cpp.o -MF CMakeFiles/cpp.dir/src/nls.cpp.o.d -o CMakeFiles/cpp.dir/src/nls.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/nls.cpp [ 90%] Building CXX object CMakeFiles/cpp.dir/src/refinement.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/refinement.cpp.o -MF CMakeFiles/cpp.dir/src/refinement.cpp.o.d -o CMakeFiles/cpp.dir/src/refinement.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/refinement.cpp [ 95%] Building CXX object CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.13 -isystem /usr/lib/python3.13/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o -MF CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o.d -o CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/src/MPICommWrapper.cpp [100%] Linking CXX shared library /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/lib.linux-s390x-cpython-313/dolfin/cpp.cpython-313-s390x-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -O3 -DNDEBUG -flto -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,cpp.cpython-313-s390x-linux-gnu.so -o /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/lib.linux-s390x-cpython-313/dolfin/cpp.cpython-313-s390x-linux-gnu.so CMakeFiles/cpp.dir/src/dolfin.cpp.o CMakeFiles/cpp.dir/src/parameter.cpp.o CMakeFiles/cpp.dir/src/adaptivity.cpp.o CMakeFiles/cpp.dir/src/ale.cpp.o CMakeFiles/cpp.dir/src/common.cpp.o CMakeFiles/cpp.dir/src/fem.cpp.o CMakeFiles/cpp.dir/src/function.cpp.o CMakeFiles/cpp.dir/src/generation.cpp.o CMakeFiles/cpp.dir/src/geometry.cpp.o CMakeFiles/cpp.dir/src/graph.cpp.o CMakeFiles/cpp.dir/src/log.cpp.o CMakeFiles/cpp.dir/src/math.cpp.o CMakeFiles/cpp.dir/src/mesh.cpp.o CMakeFiles/cpp.dir/src/multistage.cpp.o CMakeFiles/cpp.dir/src/ts.cpp.o CMakeFiles/cpp.dir/src/io.cpp.o CMakeFiles/cpp.dir/src/la.cpp.o CMakeFiles/cpp.dir/src/nls.cpp.o CMakeFiles/cpp.dir/src/refinement.cpp.o CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o -Wl,-rpath,/builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64 /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/libdolfin.so.2019.1.0 /usr/lib64/libboost_timer.so /lib64/libhdf5.so /usr/lib64/libpetsc.so /usr/bin/strip /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/lib.linux-s390x-cpython-313/dolfin/cpp.cpython-313-s390x-linux-gnu.so gmake[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313' [100%] Built target cpp gmake[1]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/python/build/temp.linux-s390x-cpython-313/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.NWjorc + umask 022 + cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build + '[' /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT ++ dirname /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/dolfin-2019.1.0.post0-build + mkdir /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd dolfin-2019.1.0.post0 + cd build + /usr/bin/make install DESTDIR=/builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT 'INSTALL=/usr/bin/install -p' /usr/bin/cmake -S/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 -B/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/CMakeFiles /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/depend make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin/ale /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin/ale /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin/ale/CMakeFiles/compile_ale_forms.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/build make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Nothing to be done for 'dolfin/ale/CMakeFiles/compile_ale_forms.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [ 0%] Built target compile_ale_forms /usr/bin/make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/depend make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/dolfin /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/dolfin/CMakeFiles/dolfin.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/build make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[2]: Nothing to be done for 'dolfin/CMakeFiles/dolfin.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' [100%] Built target dolfin make[1]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/bin/dolfin-convert -- Installing: 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/builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/multistage/RKSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/dolfin_nls.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/NewtonSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/NonlinearProblem.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/OptimisationProblem.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/PETScSNESSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/PETScTAOSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/nls/TAOLinearBoundSolver.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/parameter/dolfin_parameter.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/parameter/GlobalParameters.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/parameter/Parameter.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/parameter/Parameters.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/BisectionRefinement1D.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/dolfin_refinement.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/LocalMeshCoarsening.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/ParallelRefinement.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/PlazaRefinementND.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/refine.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/refinement/RegularCutRefinement.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/ts/dolfin_ts.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/include/dolfin/ts/CVode.h -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/libdolfin.so.2019.1.0 -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/libdolfin.so.2019.1 -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/libdolfin.so -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/DOLFINTargets.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/DOLFINTargets-relwithdebinfo.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/FindPETSc.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/FindSLEPc.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/DOLFINConfig.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/DOLFINConfigVersion.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake/UseDOLFIN.cmake -- Installing: /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/pkgconfig/dolfin.pc ---------------------------------------------------------------------------- DOLFIN has now been installed in /usr and the demo programs have been installed in /usr/share/dolfin/demo Before rushing off to try the demos, don't forget to update your environment variables. This can be done easily using the helper file 'dolfin.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/share/dolfin/dolfin.conf For future reference, we recommend that you add this command to your configuration (.bashrc, .profile or similar). ---------------------------------------------------------------------------- + cd ../python + VERBOSE=1 + CMAKE_PREFIX_PATH=/builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/cmake + CMAKE_SKIP_INSTALL_RPATH=yes + CMAKE_SKIP_RPATH=yes + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT --prefix /usr running install /usr/lib/python3.13/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() running install_lib creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13 creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin copying build/lib.linux-s390x-cpython-313/dolfin/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common copying build/lib.linux-s390x-cpython-313/dolfin/common/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common copying build/lib.linux-s390x-cpython-313/dolfin/common/plotting.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common copying build/lib.linux-s390x-cpython-313/dolfin/common/timer.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function copying build/lib.linux-s390x-cpython-313/dolfin/function/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function copying build/lib.linux-s390x-cpython-313/dolfin/function/argument.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function copying build/lib.linux-s390x-cpython-313/dolfin/function/constant.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function copying build/lib.linux-s390x-cpython-313/dolfin/function/expression.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function copying build/lib.linux-s390x-cpython-313/dolfin/function/function.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function copying build/lib.linux-s390x-cpython-313/dolfin/function/functionspace.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function copying build/lib.linux-s390x-cpython-313/dolfin/function/jit.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function copying build/lib.linux-s390x-cpython-313/dolfin/function/multimeshfunction.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function copying build/lib.linux-s390x-cpython-313/dolfin/function/multimeshfunctionspace.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function copying build/lib.linux-s390x-cpython-313/dolfin/function/specialfunctions.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/adaptivesolving.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/assembling.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/dirichletbc.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/errorcontrolgenerator.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/form.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/formmanipulations.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/interpolation.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/multimeshdirichletbc.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/norms.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/problem.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/projection.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/solvers.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem copying build/lib.linux-s390x-cpython-313/dolfin/fem/solving.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/la copying build/lib.linux-s390x-cpython-313/dolfin/la/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/la copying build/lib.linux-s390x-cpython-313/dolfin/la/solver.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/la creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/io copying build/lib.linux-s390x-cpython-313/dolfin/io/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/io creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/jit copying build/lib.linux-s390x-cpython-313/dolfin/jit/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/jit copying build/lib.linux-s390x-cpython-313/dolfin/jit/jit.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/jit copying build/lib.linux-s390x-cpython-313/dolfin/jit/pybind11jit.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/jit creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh copying build/lib.linux-s390x-cpython-313/dolfin/mesh/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh copying build/lib.linux-s390x-cpython-313/dolfin/mesh/ale.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh copying build/lib.linux-s390x-cpython-313/dolfin/mesh/meshfunction.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh copying build/lib.linux-s390x-cpython-313/dolfin/mesh/meshvaluecollection.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh copying build/lib.linux-s390x-cpython-313/dolfin/mesh/subdomain.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh copying build/lib.linux-s390x-cpython-313/dolfin/mesh/svgtools.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh copying build/lib.linux-s390x-cpython-313/dolfin/mesh/ufl_util.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage copying build/lib.linux-s390x-cpython-313/dolfin/multistage/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage copying build/lib.linux-s390x-cpython-313/dolfin/multistage/factorize.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage copying build/lib.linux-s390x-cpython-313/dolfin/multistage/multistagescheme.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage copying build/lib.linux-s390x-cpython-313/dolfin/multistage/multistagesolvers.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage copying build/lib.linux-s390x-cpython-313/dolfin/multistage/rushlarsenschemes.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/parameter copying build/lib.linux-s390x-cpython-313/dolfin/parameter/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/parameter copying build/lib.linux-s390x-cpython-313/dolfin/cpp.cpython-313-s390x-linux-gnu.so -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert copying build/lib.linux-s390x-cpython-313/dolfin_utils/meshconvert/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert copying build/lib.linux-s390x-cpython-313/dolfin_utils/meshconvert/abaqus.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert copying build/lib.linux-s390x-cpython-313/dolfin_utils/meshconvert/meshconvert.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert copying build/lib.linux-s390x-cpython-313/dolfin_utils/meshconvert/xml_writer.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test copying build/lib.linux-s390x-cpython-313/dolfin_utils/test/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test copying build/lib.linux-s390x-cpython-313/dolfin_utils/test/fixtures.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test copying build/lib.linux-s390x-cpython-313/dolfin_utils/test/paths.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test copying build/lib.linux-s390x-cpython-313/dolfin_utils/test/skips.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test creating /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/fenics copying build/lib.linux-s390x-cpython-313/fenics/__init__.py -> /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/fenics byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common/plotting.py to plotting.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common/timer.py to timer.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/argument.py to argument.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/constant.py to constant.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/expression.py to expression.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/function.py to function.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/functionspace.py to functionspace.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/jit.py to jit.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/multimeshfunction.py to multimeshfunction.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/multimeshfunctionspace.py to multimeshfunctionspace.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/specialfunctions.py to specialfunctions.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/adaptivesolving.py to adaptivesolving.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/assembling.py to assembling.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/dirichletbc.py to dirichletbc.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/errorcontrolgenerator.py to errorcontrolgenerator.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/form.py to form.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/formmanipulations.py to formmanipulations.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/interpolation.py to interpolation.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/multimeshdirichletbc.py to multimeshdirichletbc.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/norms.py to norms.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/problem.py to problem.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/projection.py to projection.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/solvers.py to solvers.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/solving.py to solving.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/la/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/la/solver.py to solver.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/io/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/jit/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/jit/jit.py to jit.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/jit/pybind11jit.py to pybind11jit.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/ale.py to ale.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/meshfunction.py to meshfunction.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/meshvaluecollection.py to meshvaluecollection.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/subdomain.py to subdomain.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/svgtools.py to svgtools.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/ufl_util.py to ufl_util.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/factorize.py to factorize.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/multistagescheme.py to multistagescheme.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/multistagesolvers.py to multistagesolvers.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/rushlarsenschemes.py to rushlarsenschemes.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/parameter/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/abaqus.py to abaqus.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py to meshconvert.cpython-313.pyc /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:509: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:865: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1187: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1189: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1191: SyntaxWarning: invalid escape sequence '\s' byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/xml_writer.py to xml_writer.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test/fixtures.py to fixtures.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test/paths.py to paths.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test/skips.py to skips.cpython-313.pyc byte-compiling /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/fenics/__init__.py to __init__.cpython-313.pyc writing byte-compilation script '/tmp/tmprz8zv3qb.py' /usr/bin/python3 /tmp/tmprz8zv3qb.py /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:509: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:865: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1187: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1189: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1191: SyntaxWarning: invalid escape sequence '\s' removing /tmp/tmprz8zv3qb.py running install_egg_info running egg_info creating fenics_dolfin.egg-info writing fenics_dolfin.egg-info/PKG-INFO writing dependency_links to fenics_dolfin.egg-info/dependency_links.txt writing requirements to fenics_dolfin.egg-info/requires.txt writing top-level names to fenics_dolfin.egg-info/top_level.txt writing manifest file 'fenics_dolfin.egg-info/SOURCES.txt' reading manifest file 'fenics_dolfin.egg-info/SOURCES.txt' writing manifest file 'fenics_dolfin.egg-info/SOURCES.txt' Copying fenics_dolfin.egg-info to /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/fenics_dolfin-2019.1.0-py3.13.egg-info running install_scripts + rm -rfv /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/bin/__pycache__ + sed -r -i '1 {s|#!/usr/bin/env python.*|#!/usr/bin/python3|}' /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/bin/dolfin-order /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/bin/dolfin-plot /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/bin/dolfin-convert + rm /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/dolfin/dolfin.conf + chrpath /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/cpp.cpython-313-s390x-linux-gnu.so /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/cpp.cpython-313-s390x-linux-gnu.so: RUNPATH=/builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64 + chrpath --delete /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/cpp.cpython-313-s390x-linux-gnu.so + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2019.1.0.post0-52.fc42 --unique-debug-suffix -2019.1.0.post0-52.fc42.s390x --unique-debug-src-base dolfin-2019.1.0.post0-52.fc42.s390x --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/dolfin-2019.1.0.post0-52.fc42.s390x 9132 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/cpp.cpython-313-s390x-linux-gnu.so Found '/builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT' in installed files; aborting + : + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/dolfin-version from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/bin/fenics-version from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/bin/dolfin-get-demos from /bin/bash to #!/usr/bin/bash + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13 using python3.13 /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:509: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:865: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1187: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1189: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1191: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:509: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:865: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1187: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1189: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/meshconvert.py:1191: SyntaxWarning: invalid escape sequence '\s' + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common/__pycache__/plotting.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common/__pycache__/plotting.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/common/__pycache__/timer.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/argument.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/functionspace.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/constant.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/functionspace.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/jit.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/multimeshfunction.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/expression.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/multimeshfunctionspace.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/expression.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/specialfunctions.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/function.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/function/__pycache__/function.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/dirichletbc.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/adaptivesolving.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/errorcontrolgenerator.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/adaptivesolving.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/form.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/assembling.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/formmanipulations.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/interpolation.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/multimeshdirichletbc.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/projection.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/solvers.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/norms.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/solving.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/problem.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/fem/__pycache__/solving.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/la/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/la/__pycache__/solver.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/io/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/jit/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/jit/__pycache__/jit.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/jit/__pycache__/pybind11jit.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/__pycache__/ale.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/__pycache__/meshfunction.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/__pycache__/meshvaluecollection.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/__pycache__/svgtools.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/__pycache__/subdomain.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/__pycache__/svgtools.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/mesh/__pycache__/ufl_util.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/__pycache__/factorize.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/__pycache__/multistagescheme.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/__pycache__/multistagescheme.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/__pycache__/multistagesolvers.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/multistage/__pycache__/rushlarsenschemes.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/parameter/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/__pycache__/abaqus.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/__pycache__/abaqus.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/__pycache__/meshconvert.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/__pycache__/meshconvert.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/meshconvert/__pycache__/xml_writer.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test/__pycache__/fixtures.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test/__pycache__/paths.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test/__pycache__/paths.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dolfin_utils/test/__pycache__/skips.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/lib64/python3.13/site-packages/fenics/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents Scanned 196 directories and 1194 files, processed 67 inodes, 67 modified (22 replaced + 45 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/dolfin-2019.1.0.post0-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.GzsUeb + umask 022 + cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd dolfin-2019.1.0.post0 + ctest -V -j2 UpdateCTestConfiguration from :/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/DartConfiguration.tcl Test project /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0 Constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end No tests were found!!! + RPM_EC=0 ++ jobs -p + exit 0 Processing files: dolfin-2019.1.0.post0-52.fc42.s390x Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.wIrooo + umask 022 + cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build + cd dolfin-2019.1.0.post0 + DOCDIR=/builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/doc/dolfin + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/doc/dolfin + cp -pr /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/README.rst /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/doc/dolfin + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.XQxnl1 + umask 022 + cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build + cd dolfin-2019.1.0.post0 + LICENSEDIR=/builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/licenses/dolfin + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/licenses/dolfin + cp -pr /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/COPYING /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/licenses/dolfin + cp -pr /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/COPYING.LESSER /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/licenses/dolfin + cp -pr /builddir/build/BUILD/dolfin-2019.1.0.post0-build/dolfin-2019.1.0.post0/AUTHORS /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT/usr/share/licenses/dolfin + RPM_EC=0 ++ jobs -p + exit 0 Provides: dolfin = 2019.1.0.post0-52.fc42 dolfin(s390-64) = 2019.1.0.post0-52.fc42 libdolfin.so.2019.1()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash libboost_filesystem.so.1.83.0()(64bit) libboost_iostreams.so.1.83.0()(64bit) libboost_program_options.so.1.83.0()(64bit) libboost_timer.so.1.83.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.2)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libm.so.6(GLIBC_2.4)(64bit) libpetsc.so.3.20()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libstdc++.so.6(GLIBCXX_LDBL_3.4.7)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: dolfin-devel-2019.1.0.post0-52.fc42.s390x Provides: dolfin-devel = 2019.1.0.post0-52.fc42 dolfin-devel(s390-64) = 2019.1.0.post0-52.fc42 pkgconfig(dolfin) = 2019.1.0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config libdolfin.so.2019.1()(64bit) Processing files: python3-dolfin-2019.1.0.post0-52.fc42.s390x Provides: python-dolfin = 2019.1.0.post0-52.fc42 python3-dolfin = 2019.1.0.post0-52.fc42 python3-dolfin(s390-64) = 2019.1.0.post0-52.fc42 python3.13-dolfin = 2019.1.0.post0-52.fc42 python3.13dist(fenics-dolfin) = 2019.1 python3dist(fenics-dolfin) = 2019.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.13dist(fenics-dijitso) < 2019.2~~ with python3.13dist(fenics-dijitso) >= 2019.1) (python3.13dist(fenics-ffc) < 2019.2~~ with python3.13dist(fenics-ffc) >= 2019.1) (python3.13dist(fenics-ufl) < 2019.2~~ with python3.13dist(fenics-ufl) >= 2019.1) /usr/bin/python3 ld64.so.1()(64bit) ld64.so.1(GLIBC_2.3)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.2)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdolfin.so.2019.1()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 python3.13dist(numpy) python3.13dist(pkgconfig) python3.13dist(pybind11) >= 2.2.4 rtld(GNU_HASH) Obsoletes: python-dolfin < 2019.1.0.post0-52.fc42 Processing files: dolfin-doc-2019.1.0.post0-52.fc42.noarch Provides: dolfin-doc = 2019.1.0.post0-52.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash Processing files: dolfin-debugsource-2019.1.0.post0-52.fc42.s390x Provides: dolfin-debugsource = 2019.1.0.post0-52.fc42 dolfin-debugsource(s390-64) = 2019.1.0.post0-52.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: dolfin-debuginfo-2019.1.0.post0-52.fc42.s390x Provides: debuginfo(build-id) = 0afa09660ac6cf819491cc0d4492a83bfac5c293 dolfin-debuginfo = 2019.1.0.post0-52.fc42 dolfin-debuginfo(s390-64) = 2019.1.0.post0-52.fc42 libdolfin.so.2019.1.0-2019.1.0.post0-52.fc42.s390x.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: dolfin-debugsource(s390-64) = 2019.1.0.post0-52.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/dolfin-2019.1.0.post0-build/BUILDROOT Wrote: /builddir/build/RPMS/dolfin-doc-2019.1.0.post0-52.fc42.noarch.rpm Wrote: /builddir/build/RPMS/dolfin-2019.1.0.post0-52.fc42.s390x.rpm Wrote: /builddir/build/RPMS/dolfin-debugsource-2019.1.0.post0-52.fc42.s390x.rpm Wrote: /builddir/build/RPMS/python3-dolfin-2019.1.0.post0-52.fc42.s390x.rpm Wrote: /builddir/build/RPMS/dolfin-devel-2019.1.0.post0-52.fc42.s390x.rpm Wrote: /builddir/build/RPMS/dolfin-debuginfo-2019.1.0.post0-52.fc42.s390x.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.PchFds + umask 022 + cd /builddir/build/BUILD/dolfin-2019.1.0.post0-build + test -d /builddir/build/BUILD/dolfin-2019.1.0.post0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/dolfin-2019.1.0.post0-build + rm -rf /builddir/build/BUILD/dolfin-2019.1.0.post0-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild dolfin-2019.1.0.post0-52.fc42.src.rpm Finish: build phase for dolfin-2019.1.0.post0-52.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-s390x-1728342442.017358/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/dolfin-2019.1.0.post0-52.fc42.src.rpm) Config(child) 13 minutes 30 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "dolfin", "epoch": null, "version": "2019.1.0.post0", "release": "52.fc42", "arch": "s390x" }, { "name": "dolfin", "epoch": null, "version": "2019.1.0.post0", "release": "52.fc42", "arch": "src" }, { "name": "dolfin-debuginfo", "epoch": null, "version": "2019.1.0.post0", "release": "52.fc42", "arch": "s390x" }, { "name": "dolfin-doc", "epoch": null, "version": "2019.1.0.post0", "release": "52.fc42", "arch": "noarch" }, { "name": "dolfin-devel", "epoch": null, "version": "2019.1.0.post0", "release": "52.fc42", "arch": "s390x" }, { "name": "dolfin-debugsource", "epoch": null, "version": "2019.1.0.post0", "release": "52.fc42", "arch": "s390x" }, { "name": "python3-dolfin", "epoch": null, "version": "2019.1.0.post0", "release": "52.fc42", "arch": "s390x" } ] } RPMResults finished