Warning: Permanently added '169.59.161.179' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8390556-fedora-rawhide-s390x --chroot fedora-rawhide-s390x Version: 1.2 PID: 10760 Logging PID: 10761 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8390556, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-s390x', 'enable_net': False, 'fedora_review': False, 'git_hash': '105e95810bcaa569ce2af4ba2913e061ce67d5a4', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23:pr:8/python-dipy', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'python-dipy', 'package_version': '1.10.0-4', 'project_dirname': 'openblas-0.3.23:pr:8', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-rawhide-s390x/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/packit', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/packit', 'tags': [], 'task_id': '8390556-fedora-rawhide-s390x', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23:pr:8/python-dipy /var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23:pr:8/python-dipy', '/var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy'... Running: git checkout 105e95810bcaa569ce2af4ba2913e061ce67d5a4 -- cmd: ['git', 'checkout', '105e95810bcaa569ce2af4ba2913e061ce67d5a4', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy rc: 0 stdout: stderr: Note: switching to '105e95810bcaa569ce2af4ba2913e061ce67d5a4'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 105e958 automatic import of python-dipy Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading dipy-1.10.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o dipy-1.10.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23:pr:8/python-dipy/dipy-1.10.0.tar.gz/md5/00264dda75c29f0360e4fbd4d29f7e82/dipy-1.10.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 6573k 100 6573k 0 0 25.7M 0 --:--:-- --:--:-- --:--:-- 25.7M INFO: Reading stdout from command: md5sum dipy-1.10.0.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy/python-dipy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1734111344.275356 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.13.0, NVR = mock-5.9-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy/python-dipy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1734111344.275356 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy/python-dipy.spec) Config(fedora-rawhide-s390x) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1734111344.275356/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-s390x-bootstrap-1734111344.275356/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/9e3f497dc6d302b2c6e602b860fc3da68993b434e42a6016cb572ab546410925/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/9e3f497dc6d302b2c6e602b860fc3da68993b434e42a6016cb572ab546410925/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-1734111344.275356/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.s390x rpm-sequoia-1.7.0-3.fc42.s390x dnf5-5.2.8.1-2.fc42.s390x dnf5-plugins-5.2.8.1-2.fc42.s390x Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 7.5 MiB/s | 19.8 MiB | 00m03s Copr repository 100% | 13.1 MiB/s | 3.0 MiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 4.2 MiB/s | 13.8 MiB | 00m03s Repositories loaded. 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6.5-2.20240629.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB ocaml-srpm-macros noarch 10-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B openldap s390x 2.6.8-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 654.5 KiB openssl-libs s390x 1:3.2.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.1 MiB p11-kit s390x 0.25.5-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB p11-kit-trust s390x 0.25.5-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 479.2 KiB package-notes-srpm-macros noarch 0.5-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam s390x 1.7.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB pam-libs s390x 1.7.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 122.5 KiB pcre2 s390x 10.44-1.fc41.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 684.9 KiB pcre2-syntax noarch 10.44-1.fc41.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 251.6 KiB perl-srpm-macros noarch 1-56.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf s390x 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 92.4 KiB pkgconf-m4 noarch 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB pkgconf-pkg-config s390x 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 988.0 B popt s390x 1.19-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.7 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.16.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.8.1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline s390x 8.2-11.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 556.8 KiB rpm s390x 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB rpm-build-libs s390x 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.4 KiB rpm-libs s390x 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 813.6 KiB rpm-sequoia s390x 1.7.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.2 MiB rust-srpm-macros noarch 26.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB sqlite-libs s390x 3.47.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB systemd-libs s390x 257-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB util-linux-core s390x 2.40.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB xxhash-libs s390x 0.8.2-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68.0 KiB xz-libs s390x 1:5.6.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 226.1 KiB zig-srpm-macros noarch 1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip s390x 3.0-42.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 723.1 KiB zlib-ng-compat s390x 2.2.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 109.4 KiB zstd s390x 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 53 MiB. Need to download 53 MiB. After this operation, 184 MiB extra will be used (install 184 MiB, remove 0 B). [ 1/153] bzip2-0:1.0.8-19.fc41.s390x 100% | 1.7 MiB/s | 53.2 KiB | 00m00s [ 2/153] cpio-0:2.15-2.fc41.s390x 100% | 25.7 MiB/s | 290.0 KiB | 00m00s [ 3/153] diffutils-0:3.10-8.fc41.s390x 100% | 33.4 MiB/s | 410.7 KiB | 00m00s [ 4/153] fedora-release-common-0:42-0. 100% | 7.8 MiB/s | 23.9 KiB | 00m00s [ 5/153] findutils-1:4.10.0-4.fc41.s39 100% | 33.5 MiB/s | 548.8 KiB | 00m00s [ 6/153] coreutils-0:9.5-11.fc42.s390x 100% | 4.5 MiB/s | 1.2 MiB | 00m00s [ 7/153] glibc-minimal-langpack-0:2.40 100% | 14.4 MiB/s | 117.9 KiB | 00m00s [ 8/153] grep-0:3.11-9.fc41.s390x 100% | 32.2 MiB/s | 296.5 KiB | 00m00s [ 9/153] gzip-0:1.13-2.fc41.s390x 100% | 23.9 MiB/s | 171.1 KiB | 00m00s [ 10/153] info-0:7.1.1-2.fc42.s390x 100% | 18.9 MiB/s | 193.4 KiB | 00m00s [ 11/153] gawk-0:5.3.0-4.fc41.s390x 100% | 5.0 MiB/s | 1.1 MiB | 00m00s [ 12/153] patch-0:2.7.6-25.fc41.s390x 100% | 19.6 MiB/s | 140.4 KiB | 00m00s [ 13/153] rpm-build-0:4.20.0-1.fc42.s39 100% | 12.3 MiB/s | 75.8 KiB | 00m00s [ 14/153] redhat-rpm-config-0:296-1.fc4 100% | 5.7 MiB/s | 75.7 KiB | 00m00s [ 15/153] sed-0:4.9-3.fc41.s390x 100% | 27.7 MiB/s | 311.8 KiB | 00m00s [ 16/153] bash-0:5.2.37-1.fc42.s390x 100% | 4.0 MiB/s | 1.8 MiB | 00m00s [ 17/153] unzip-0:6.0-65.fc42.s390x 100% | 23.8 MiB/s | 195.1 KiB | 00m00s [ 18/153] shadow-utils-2:4.17.0~rc1-1.f 100% | 5.6 MiB/s | 1.2 MiB | 00m00s [ 19/153] tar-2:1.35-4.fc41.s390x 100% | 3.9 MiB/s | 869.1 KiB | 00m00s [ 20/153] which-0:2.21-42.fc41.s390x 100% | 7.0 MiB/s | 43.0 KiB | 00m00s [ 21/153] xz-1:5.6.3-2.fc42.s390x 100% | 32.3 MiB/s | 462.6 KiB | 00m00s [ 22/153] glibc-common-0:2.40.9000-22.f 100% | 30.4 MiB/s | 404.3 KiB | 00m00s [ 23/153] util-linux-0:2.40.2-8.fc42.s3 100% | 4.9 MiB/s | 1.1 MiB | 00m00s [ 24/153] xz-libs-1:5.6.3-2.fc42.s390x 100% | 16.5 MiB/s | 118.1 KiB | 00m00s [ 25/153] audit-libs-0:4.0.2-1.fc41.s39 100% | 15.5 MiB/s | 126.6 KiB | 00m00s [ 26/153] authselect-libs-0:1.5.0-8.fc4 100% | 24.9 MiB/s | 204.4 KiB | 00m00s [ 27/153] libblkid-0:2.40.2-8.fc42.s390 100% | 21.3 MiB/s | 130.8 KiB | 00m00s [ 28/153] libcap-ng-0:0.8.5-3.fc41.s390 100% | 4.6 MiB/s | 33.2 KiB | 00m00s [ 29/153] libfdisk-0:2.40.2-8.fc42.s390 100% | 20.2 MiB/s | 165.6 KiB | 00m00s [ 30/153] libmount-0:2.40.2-8.fc42.s390 100% | 26.0 MiB/s | 159.7 KiB | 00m00s [ 31/153] libselinux-0:3.8-0.rc1.2.fc42 100% | 15.3 MiB/s | 94.0 KiB | 00m00s [ 32/153] libsmartcols-0:2.40.2-8.fc42. 100% | 12.0 MiB/s | 86.0 KiB | 00m00s [ 33/153] libuuid-0:2.40.2-8.fc42.s390x 100% | 5.7 MiB/s | 29.2 KiB | 00m00s [ 34/153] ncurses-libs-0:6.5-2.20240629 100% | 22.0 MiB/s | 360.6 KiB | 00m00s [ 35/153] glibc-gconv-extra-0:2.40.9000 100% | 6.5 MiB/s | 1.5 MiB | 00m00s [ 36/153] pam-0:1.7.0-3.fc42.s390x 100% | 36.7 MiB/s | 526.5 KiB | 00m00s [ 37/153] pam-libs-0:1.7.0-3.fc42.s390x 100% | 7.2 MiB/s | 59.1 KiB | 00m00s [ 38/153] readline-0:8.2-11.fc42.s390x 100% | 28.0 MiB/s | 229.7 KiB | 00m00s [ 39/153] systemd-libs-0:257-1.fc42.s39 100% | 40.5 MiB/s | 787.5 KiB | 00m00s [ 40/153] util-linux-core-0:2.40.2-8.fc 100% | 36.8 MiB/s | 528.0 KiB | 00m00s [ 41/153] bzip2-libs-0:1.0.8-19.fc41.s3 100% | 11.3 MiB/s | 46.3 KiB | 00m00s [ 42/153] zlib-ng-compat-0:2.2.2-1.fc42 100% | 10.7 MiB/s | 66.0 KiB | 00m00s [ 43/153] libacl-0:2.3.2-2.fc41.s390x 100% | 6.2 MiB/s | 25.4 KiB | 00m00s [ 44/153] libcap-0:2.71-1.fc42.s390x 100% | 17.4 MiB/s | 89.1 KiB | 00m00s [ 45/153] libgcc-0:14.2.1-6.fc42.s390x 100% | 18.0 MiB/s | 92.2 KiB | 00m00s [ 46/153] libattr-0:2.5.2-4.fc41.s390x 100% | 3.6 MiB/s | 18.4 KiB | 00m00s [ 47/153] libeconf-0:0.7.5-1.fc42.s390x 100% | 6.8 MiB/s | 34.6 KiB | 00m00s [ 48/153] libsemanage-0:3.8-0.rc1.1.fc4 100% | 19.0 MiB/s | 116.6 KiB | 00m00s [ 49/153] libxcrypt-0:4.4.36-11.fc42.s3 100% | 15.1 MiB/s | 123.7 KiB | 00m00s [ 50/153] setup-0:2.15.0-5.fc41.noarch 100% | 24.1 MiB/s | 148.3 KiB | 00m00s [ 51/153] debugedit-0:5.1-2.fc42.s390x 100% | 15.8 MiB/s | 80.9 KiB | 00m00s [ 52/153] elfutils-0:0.192-7.fc42.s390x 100% | 38.1 MiB/s | 545.9 KiB | 00m00s [ 53/153] elfutils-libelf-0:0.192-7.fc4 100% | 29.3 MiB/s | 210.0 KiB | 00m00s [ 54/153] file-0:5.45-8.fc42.s390x 100% | 7.9 MiB/s | 48.8 KiB | 00m00s [ 55/153] libarchive-0:3.7.7-1.fc42.s39 100% | 43.6 MiB/s | 446.9 KiB | 00m00s [ 56/153] pkgconf-pkg-config-0:2.3.0-1. 100% | 1.9 MiB/s | 9.9 KiB | 00m00s [ 57/153] popt-0:1.19-7.fc41.s390x 100% | 8.6 MiB/s | 61.9 KiB | 00m00s [ 58/153] rpm-0:4.20.0-1.fc42.s390x 100% | 38.9 MiB/s | 518.1 KiB | 00m00s [ 59/153] rpm-build-libs-0:4.20.0-1.fc4 100% | 16.4 MiB/s | 100.5 KiB | 00m00s [ 60/153] rpm-libs-0:4.20.0-1.fc42.s390 100% | 39.6 MiB/s | 324.6 KiB | 00m00s [ 61/153] zstd-0:1.5.6-2.fc41.s390x 100% | 38.9 MiB/s | 517.6 KiB | 00m00s [ 62/153] curl-0:8.11.1-1.fc42.s390x 100% | 24.2 MiB/s | 223.4 KiB | 00m00s [ 63/153] ansible-srpm-macros-0:1-16.fc 100% | 6.8 MiB/s | 20.8 KiB | 00m00s [ 64/153] build-reproducibility-srpm-ma 100% | 3.6 MiB/s | 11.2 KiB | 00m00s [ 65/153] dwz-0:0.15-8.fc42.s390x 100% | 17.6 MiB/s | 144.6 KiB | 00m00s [ 66/153] efi-srpm-macros-0:5-13.fc42.n 100% | 5.5 MiB/s | 22.5 KiB | 00m00s [ 67/153] fonts-srpm-macros-1:2.0.5-17. 100% | 6.6 MiB/s | 27.0 KiB | 00m00s [ 68/153] glibc-0:2.40.9000-22.fc42.s39 100% | 4.1 MiB/s | 1.8 MiB | 00m00s [ 69/153] forge-srpm-macros-0:0.4.0-1.f 100% | 4.8 MiB/s | 19.8 KiB | 00m00s [ 70/153] fpc-srpm-macros-0:1.3-13.fc41 100% | 2.6 MiB/s | 8.0 KiB | 00m00s [ 71/153] ghc-srpm-macros-0:1.9.2-1.fc4 100% | 3.0 MiB/s | 9.1 KiB | 00m00s [ 72/153] gnat-srpm-macros-0:6-6.fc41.n 100% | 2.9 MiB/s | 9.0 KiB | 00m00s [ 73/153] go-srpm-macros-0:3.6.0-5.fc42 100% | 9.1 MiB/s | 28.0 KiB | 00m00s [ 74/153] kernel-srpm-macros-0:1.0-24.f 100% | 3.2 MiB/s | 9.9 KiB | 00m00s [ 75/153] lua-srpm-macros-0:1-14.fc41.n 100% | 2.9 MiB/s | 8.9 KiB | 00m00s [ 76/153] ocaml-srpm-macros-0:10-3.fc41 100% | 3.0 MiB/s | 9.2 KiB | 00m00s [ 77/153] openblas-srpm-macros-0:2-18.f 100% | 2.5 MiB/s | 7.7 KiB | 00m00s [ 78/153] package-notes-srpm-macros-0:0 100% | 4.8 MiB/s | 9.8 KiB | 00m00s [ 79/153] perl-srpm-macros-0:1-56.fc41. 100% | 2.8 MiB/s | 8.5 KiB | 00m00s [ 80/153] pyproject-srpm-macros-0:1.16. 100% | 4.5 MiB/s | 13.9 KiB | 00m00s [ 81/153] python-srpm-macros-0:3.13-3.f 100% | 7.7 MiB/s | 23.7 KiB | 00m00s [ 82/153] qt5-srpm-macros-0:5.15.15-1.f 100% | 2.2 MiB/s | 8.9 KiB | 00m00s [ 83/153] qt6-srpm-macros-0:6.8.1-4.fc4 100% | 3.0 MiB/s | 9.3 KiB | 00m00s [ 84/153] rust-srpm-macros-0:26.3-3.fc4 100% | 3.9 MiB/s | 12.1 KiB | 00m00s [ 85/153] zig-srpm-macros-0:1-3.fc41.no 100% | 2.0 MiB/s | 8.1 KiB | 00m00s [ 86/153] pkgconf-0:2.3.0-1.fc42.s390x 100% | 9.0 MiB/s | 45.8 KiB | 00m00s [ 87/153] zip-0:3.0-42.fc42.s390x 100% | 29.8 MiB/s | 274.7 KiB | 00m00s [ 88/153] pkgconf-m4-0:2.3.0-1.fc42.noa 100% | 4.7 MiB/s | 14.3 KiB | 00m00s [ 89/153] libpkgconf-0:2.3.0-1.fc42.s39 100% | 7.6 MiB/s | 39.0 KiB | 00m00s [ 90/153] ed-0:1.20.2-2.fc41.s390x 100% | 16.3 MiB/s | 83.3 KiB | 00m00s [ 91/153] authselect-0:1.5.0-8.fc42.s39 100% | 22.9 MiB/s | 140.9 KiB | 00m00s [ 92/153] gdbm-1:1.23-7.fc41.s390x 100% | 18.4 MiB/s | 150.9 KiB | 00m00s [ 93/153] gdbm-libs-1:1.23-7.fc41.s390x 100% | 9.4 MiB/s | 58.0 KiB | 00m00s [ 94/153] libpwquality-0:1.4.5-11.fc41. 100% | 15.2 MiB/s | 109.1 KiB | 00m00s [ 95/153] libtirpc-0:1.3.6-1.fc42.s390x 100% | 15.7 MiB/s | 96.4 KiB | 00m00s [ 96/153] ca-certificates-0:2024.2.69_v 100% | 48.5 MiB/s | 944.5 KiB | 00m00s [ 97/153] crypto-policies-0:20241128-1. 100% | 18.0 MiB/s | 73.7 KiB | 00m00s [ 98/153] ncurses-base-0:6.5-2.20240629 100% | 15.6 MiB/s | 63.8 KiB | 00m00s [ 99/153] krb5-libs-0:1.21.3-3.fc42.s39 100% | 47.6 MiB/s | 779.7 KiB | 00m00s [100/153] libcom_err-0:1.47.1-6.fc42.s3 100% | 3.7 MiB/s | 26.5 KiB | 00m00s [101/153] libsepol-0:3.8-0.rc1.1.fc42.s 100% | 31.1 MiB/s | 350.5 KiB | 00m00s [102/153] pcre2-0:10.44-1.fc41.1.s390x 100% | 31.8 MiB/s | 260.8 KiB | 00m00s [103/153] cracklib-0:2.9.11-6.fc41.s390 100% | 13.6 MiB/s | 83.7 KiB | 00m00s [104/153] libxml2-0:2.12.8-2.fc41.s390x 100% | 46.0 MiB/s | 707.0 KiB | 00m00s [105/153] libzstd-0:1.5.6-2.fc41.s390x 100% | 37.6 MiB/s | 346.9 KiB | 00m00s [106/153] lz4-libs-0:1.10.0-1.fc41.s390 100% | 13.2 MiB/s | 94.7 KiB | 00m00s [107/153] keyutils-libs-0:1.6.3-4.fc41. 100% | 4.4 MiB/s | 31.5 KiB | 00m00s [108/153] libverto-0:0.3.2-9.fc41.s390x 100% | 5.1 MiB/s | 20.9 KiB | 00m00s [109/153] basesystem-0:11-21.fc41.noarc 100% | 2.4 MiB/s | 7.4 KiB | 00m00s [110/153] filesystem-0:3.18-29.fc42.s39 100% | 46.5 MiB/s | 1.1 MiB | 00m00s [111/153] gmp-1:6.3.0-2.fc41.s390x 100% | 35.4 MiB/s | 326.3 KiB | 00m00s [112/153] mpfr-0:4.2.1-5.fc41.s390x 100% | 26.4 MiB/s | 297.8 KiB | 00m00s [113/153] file-libs-0:5.45-8.fc42.s390x 100% | 44.2 MiB/s | 768.6 KiB | 00m00s [114/153] fedora-repos-0:42-0.3.noarch 100% | 3.0 MiB/s | 9.2 KiB | 00m00s [115/153] elfutils-debuginfod-client-0: 100% | 11.0 MiB/s | 44.9 KiB | 00m00s [116/153] elfutils-libs-0:0.192-7.fc42. 100% | 33.5 MiB/s | 274.2 KiB | 00m00s [117/153] libstdc++-0:14.2.1-6.fc42.s39 100% | 46.2 MiB/s | 993.5 KiB | 00m00s [118/153] openssl-libs-1:3.2.2-8.fc42.s 100% | 8.5 MiB/s | 2.0 MiB | 00m00s [119/153] libffi-0:3.4.6-3.fc42.s390x 100% | 7.0 MiB/s | 36.0 KiB | 00m00s [120/153] p11-kit-0:0.25.5-4.fc42.s390x 100% | 33.8 MiB/s | 518.5 KiB | 00m00s [121/153] p11-kit-trust-0:0.25.5-4.fc42 100% | 20.0 MiB/s | 143.5 KiB | 00m00s [122/153] add-determinism-0:0.4.3-1.fc4 100% | 4.9 MiB/s | 1.1 MiB | 00m00s [123/153] alternatives-0:1.30-1.fc41.s3 100% | 7.1 MiB/s | 43.4 KiB | 00m00s [124/153] jansson-0:2.14-1.fc42.s390x 100% | 8.8 MiB/s | 45.3 KiB | 00m00s [125/153] lua-libs-0:5.4.7-1.fc42.s390x 100% | 19.8 MiB/s | 141.9 KiB | 00m00s [126/153] coreutils-common-0:9.5-11.fc4 100% | 4.7 MiB/s | 2.1 MiB | 00m00s [127/153] sqlite-libs-0:3.47.2-1.fc42.s 100% | 38.8 MiB/s | 755.2 KiB | 00m00s [128/153] libgomp-0:14.2.1-6.fc42.s390x 100% | 35.1 MiB/s | 359.2 KiB | 00m00s [129/153] pcre2-syntax-0:10.44-1.fc41.1 100% | 29.3 MiB/s | 149.9 KiB | 00m00s [130/153] libtasn1-0:4.19.0-9.fc41.s390 100% | 12.7 MiB/s | 78.0 KiB | 00m00s [131/153] fedora-gpg-keys-0:42-0.3.noar 100% | 24.1 MiB/s | 123.4 KiB | 00m00s [132/153] rpm-sequoia-0:1.7.0-3.fc42.s3 100% | 4.5 MiB/s | 988.6 KiB | 00m00s [133/153] fedora-repos-rawhide-0:42-0.3 100% | 2.9 MiB/s | 8.8 KiB | 00m00s [134/153] elfutils-default-yama-scope-0 100% | 4.1 MiB/s | 12.5 KiB | 00m00s [135/153] json-c-0:0.18-1.fc42.s390x 100% | 8.7 MiB/s | 44.6 KiB | 00m00s [136/153] fedora-release-0:42-0.11.noar 100% | 3.2 MiB/s | 13.0 KiB | 00m00s [137/153] fedora-release-identity-basic 100% | 3.4 MiB/s | 13.8 KiB | 00m00s [138/153] libcurl-0:8.11.1-1.fc42.s390x 100% | 28.0 MiB/s | 372.1 KiB | 00m00s [139/153] gdb-minimal-0:15.2-6.fc42.s39 100% | 172.9 MiB/s | 4.3 MiB | 00m00s [140/153] xxhash-libs-0:0.8.2-4.fc42.s3 100% | 5.1 MiB/s | 36.2 KiB | 00m00s [141/153] libbrotli-0:1.1.0-5.fc41.s390 100% | 37.3 MiB/s | 381.7 KiB | 00m00s [142/153] libidn2-0:2.3.7-2.fc41.s390x 100% | 15.7 MiB/s | 112.6 KiB | 00m00s [143/153] libpsl-0:0.21.5-4.fc41.s390x 100% | 12.6 MiB/s | 64.5 KiB | 00m00s [144/153] libnghttp2-0:1.64.0-1.fc42.s3 100% | 15.6 MiB/s | 79.8 KiB | 00m00s [145/153] libssh-0:0.11.1-1.fc42.s390x 100% | 22.4 MiB/s | 229.8 KiB | 00m00s [146/153] openldap-0:2.6.8-6.fc42.s390x 100% | 24.4 MiB/s | 249.3 KiB | 00m00s [147/153] libevent-0:2.1.12-14.fc41.s39 100% | 25.4 MiB/s | 260.1 KiB | 00m00s [148/153] libtool-ltdl-0:2.5.4-1.fc42.s 100% | 8.5 MiB/s | 34.6 KiB | 00m00s [149/153] libssh-config-0:0.11.1-1.fc42 100% | 3.1 MiB/s | 9.4 KiB | 00m00s [150/153] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 36.7 MiB/s | 827.5 KiB | 00m00s [151/153] publicsuffix-list-dafsa-0:202 100% | 11.4 MiB/s | 58.3 KiB | 00m00s [152/153] libunistring-0:1.1-8.fc41.s39 100% | 42.0 MiB/s | 558.7 KiB | 00m00s [153/153] binutils-0:2.43.50-9.fc42.s39 100% | 3.7 MiB/s | 6.1 MiB | 00m02s -------------------------------------------------------------------------------- [153/153] Total 100% | 21.1 MiB/s | 52.6 MiB | 00m02s Running transaction [ 1/155] Verify package files 100% | 792.0 B/s | 153.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-29.fc42.s390x >>> Finished pre-transaction scriptlet: filesystem-0:3.18-29.fc42.s390x >>> [RPM] /var/lib/mock/fedora-rawhide-s390x-1734111344.275356/root/var/cache/dn [ 2/155] Prepare transaction 100% | 2.9 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:14.2.1-6. 100% | 166.9 MiB/s | 170.9 KiB | 00m00s [ 4/155] Installing publicsuffix-list- 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 5/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/155] Installing fedora-release-ide 100% | 0.0 B/s | 976.0 B | 00m00s [ 7/155] Installing fedora-gpg-keys-0: 100% | 42.0 MiB/s | 172.2 KiB | 00m00s [ 8/155] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 9/155] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/155] Installing fedora-release-com 100% | 23.6 MiB/s | 24.1 KiB | 00m00s [ 11/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/155] Installing setup-0:2.15.0-5.f 100% | 50.6 MiB/s | 726.1 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/155] Installing filesystem-0:3.18- 100% | 3.1 MiB/s | 212.6 KiB | 00m00s [ 14/155] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 15/155] Installing pcre2-syntax-0:10. 100% | 248.1 MiB/s | 254.1 KiB | 00m00s [ 16/155] Installing coreutils-common-0 100% | 329.1 MiB/s | 11.2 MiB | 00m00s [ 17/155] Installing ncurses-base-0:6.5 100% | 85.9 MiB/s | 351.7 KiB | 00m00s [ 18/155] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 19/155] Installing ncurses-libs-0:6.5 100% | 212.5 MiB/s | 1.1 MiB | 00m00s [ 20/155] Installing glibc-0:2.40.9000- 100% | 230.5 MiB/s | 5.1 MiB | 00m00s [ 21/155] Installing bash-0:5.2.37-1.fc 100% | 365.3 MiB/s | 8.4 MiB | 00m00s [ 22/155] Installing glibc-common-0:2.4 100% | 152.4 MiB/s | 1.1 MiB | 00m00s [ 23/155] Installing glibc-gconv-extra- 100% | 200.8 MiB/s | 6.6 MiB | 00m00s [ 24/155] Installing zlib-ng-compat-0:2 100% | 107.7 MiB/s | 110.3 KiB | 00m00s [ 25/155] Installing xz-libs-1:5.6.3-2. 100% | 221.9 MiB/s | 227.2 KiB | 00m00s [ 26/155] Installing bzip2-libs-0:1.0.8 100% | 0.0 B/s | 89.6 KiB | 00m00s [ 27/155] Installing libuuid-0:2.40.2-8 100% | 0.0 B/s | 42.3 KiB | 00m00s [ 28/155] Installing readline-0:8.2-11. 100% | 272.9 MiB/s | 558.9 KiB | 00m00s [ 29/155] Installing popt-0:1.19-7.fc41 100% | 73.9 MiB/s | 151.3 KiB | 00m00s [ 30/155] Installing libblkid-0:2.40.2- 100% | 280.8 MiB/s | 287.6 KiB | 00m00s [ 31/155] Installing libattr-0:2.5.2-4. 100% | 0.0 B/s | 29.3 KiB | 00m00s [ 32/155] Installing libacl-0:2.3.2-2.f 100% | 0.0 B/s | 44.6 KiB | 00m00s [ 33/155] Installing libxcrypt-0:4.4.36 100% | 133.7 MiB/s | 273.9 KiB | 00m00s [ 34/155] Installing libzstd-0:1.5.6-2. 100% | 214.1 MiB/s | 877.0 KiB | 00m00s [ 35/155] Installing elfutils-libelf-0: 100% | 293.7 MiB/s | 1.2 MiB | 00m00s [ 36/155] Installing gmp-1:6.3.0-2.fc41 100% | 251.4 MiB/s | 772.2 KiB | 00m00s [ 37/155] Installing libstdc++-0:14.2.1 100% | 282.2 MiB/s | 3.1 MiB | 00m00s [ 38/155] Installing libeconf-0:0.7.5-1 100% | 0.0 B/s | 64.2 KiB | 00m00s [ 39/155] Installing gdbm-libs-1:1.23-7 100% | 132.0 MiB/s | 135.1 KiB | 00m00s [ 40/155] Installing mpfr-0:4.2.1-5.fc4 100% | 228.0 MiB/s | 700.4 KiB | 00m00s [ 41/155] Installing gawk-0:5.3.0-4.fc4 100% | 226.8 MiB/s | 1.8 MiB | 00m00s [ 42/155] Installing dwz-0:0.15-8.fc42. 100% | 312.5 MiB/s | 320.0 KiB | 00m00s [ 43/155] Installing unzip-0:6.0-65.fc4 100% | 552.0 MiB/s | 2.2 MiB | 00m00s [ 44/155] Installing file-libs-0:5.45-8 100% | 523.3 MiB/s | 9.9 MiB | 00m00s [ 45/155] Installing file-0:5.45-8.fc42 100% | 14.1 MiB/s | 100.8 KiB | 00m00s [ 46/155] Installing crypto-policies-0: 100% | 32.0 MiB/s | 163.7 KiB | 00m00s [ 47/155] Installing libcap-ng-0:0.8.5- 100% | 76.7 MiB/s | 78.6 KiB | 00m00s [ 48/155] Installing audit-libs-0:4.0.2 100% | 172.4 MiB/s | 353.0 KiB | 00m00s [ 49/155] Installing pam-libs-0:1.7.0-3 100% | 121.8 MiB/s | 124.8 KiB | 00m00s [ 50/155] Installing libcap-0:2.71-1.fc 100% | 105.8 MiB/s | 216.7 KiB | 00m00s [ 51/155] Installing systemd-libs-0:257 100% | 249.5 MiB/s | 2.2 MiB | 00m00s [ 52/155] Installing libsmartcols-0:2.4 100% | 188.7 MiB/s | 193.2 KiB | 00m00s [ 53/155] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 68.0 KiB | 00m00s [ 54/155] Installing libsepol-0:3.8-0.r 100% | 208.7 MiB/s | 854.7 KiB | 00m00s [ 55/155] Installing pcre2-0:10.44-1.fc 100% | 223.4 MiB/s | 686.3 KiB | 00m00s [ 56/155] Installing libselinux-0:3.8-0 100% | 195.9 MiB/s | 200.7 KiB | 00m00s [ 57/155] Installing sed-0:4.9-3.fc41.s 100% | 215.2 MiB/s | 881.4 KiB | 00m00s [ 58/155] Installing findutils-1:4.10.0 100% | 270.4 MiB/s | 1.9 MiB | 00m00s [ 59/155] Installing grep-0:3.11-9.fc41 100% | 203.7 MiB/s | 1.0 MiB | 00m00s [ 60/155] Installing xz-1:5.6.3-2.fc42. 100% | 206.8 MiB/s | 1.2 MiB | 00m00s [ 61/155] Installing libmount-0:2.40.2- 100% | 184.0 MiB/s | 376.9 KiB | 00m00s [ 62/155] Installing lz4-libs-0:1.10.0- 100% | 197.6 MiB/s | 202.4 KiB | 00m00s [ 63/155] Installing libffi-0:3.4.6-3.f 100% | 0.0 B/s | 67.3 KiB | 00m00s [ 64/155] Installing alternatives-0:1.3 100% | 0.0 B/s | 71.7 KiB | 00m00s [ 65/155] Installing lua-libs-0:5.4.7-1 100% | 322.3 MiB/s | 330.0 KiB | 00m00s [ 66/155] Installing libtasn1-0:4.19.0- 100% | 184.9 MiB/s | 189.3 KiB | 00m00s [ 67/155] Installing p11-kit-0:0.25.5-4 100% | 228.3 MiB/s | 2.5 MiB | 00m00s [ 68/155] Installing libunistring-0:1.1 100% | 253.3 MiB/s | 1.8 MiB | 00m00s [ 69/155] Installing libidn2-0:2.3.7-2. 100% | 109.0 MiB/s | 334.9 KiB | 00m00s [ 70/155] Installing libpsl-0:0.21.5-4. 100% | 0.0 B/s | 81.4 KiB | 00m00s [ 71/155] Installing p11-kit-trust-0:0. 100% | 58.7 MiB/s | 480.9 KiB | 00m00s [ 72/155] Installing openssl-libs-1:3.2 100% | 211.8 MiB/s | 6.1 MiB | 00m00s [ 73/155] Installing coreutils-0:9.5-11 100% | 212.1 MiB/s | 5.7 MiB | 00m00s [ 74/155] Installing ca-certificates-0: 100% | 1.7 MiB/s | 2.4 MiB | 00m01s [ 75/155] Installing gzip-0:1.13-2.fc41 100% | 99.2 MiB/s | 406.3 KiB | 00m00s [ 76/155] Installing authselect-libs-0: 100% | 91.0 MiB/s | 838.5 KiB | 00m00s [ 77/155] Installing cracklib-0:2.9.11- 100% | 51.1 MiB/s | 261.4 KiB | 00m00s [ 78/155] Installing libpwquality-0:1.4 100% | 70.5 MiB/s | 433.3 KiB | 00m00s [ 79/155] Installing rpm-sequoia-0:1.7. 100% | 175.5 MiB/s | 3.2 MiB | 00m00s [ 80/155] Installing libevent-0:2.1.12- 100% | 184.1 MiB/s | 942.6 KiB | 00m00s [ 81/155] Installing zstd-0:1.5.6-2.fc4 100% | 262.1 MiB/s | 1.8 MiB | 00m00s [ 82/155] Installing util-linux-core-0: 100% | 192.9 MiB/s | 1.5 MiB | 00m00s [ 83/155] Installing tar-2:1.35-4.fc41. 100% | 274.6 MiB/s | 3.0 MiB | 00m00s [ 84/155] Installing libsemanage-0:3.8- 100% | 149.8 MiB/s | 306.9 KiB | 00m00s [ 85/155] Installing shadow-utils-2:4.1 100% | 192.7 MiB/s | 4.0 MiB | 00m00s [ 86/155] Installing zip-0:3.0-42.fc42. 100% | 236.7 MiB/s | 727.0 KiB | 00m00s [ 87/155] Installing gdbm-1:1.23-7.fc41 100% | 159.1 MiB/s | 488.8 KiB | 00m00s [ 88/155] Installing cyrus-sasl-lib-0:2 100% | 265.4 MiB/s | 2.4 MiB | 00m00s [ 89/155] Installing libfdisk-0:2.40.2- 100% | 193.3 MiB/s | 395.9 KiB | 00m00s [ 90/155] Installing bzip2-0:1.0.8-19.f 100% | 101.3 MiB/s | 103.7 KiB | 00m00s [ 91/155] Installing libxml2-0:2.12.8-2 100% | 234.9 MiB/s | 1.9 MiB | 00m00s [ 92/155] Installing libarchive-0:3.7.7 100% | 249.5 MiB/s | 1.0 MiB | 00m00s [ 93/155] Installing add-determinism-0: 100% | 274.1 MiB/s | 3.3 MiB | 00m00s [ 94/155] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 95/155] Installing sqlite-libs-0:3.47 100% | 226.7 MiB/s | 1.6 MiB | 00m00s [ 96/155] Installing rpm-libs-0:4.20.0- 100% | 199.0 MiB/s | 815.1 KiB | 00m00s [ 97/155] Installing ed-0:1.20.2-2.fc41 100% | 149.3 MiB/s | 152.9 KiB | 00m00s [ 98/155] Installing patch-0:2.7.6-25.f 100% | 146.4 MiB/s | 299.9 KiB | 00m00s [ 99/155] Installing elfutils-default-y 100% | 408.6 KiB/s | 2.0 KiB | 00m00s [100/155] Installing elfutils-libs-0:0. 100% | 182.7 MiB/s | 748.4 KiB | 00m00s [101/155] Installing cpio-0:2.15-2.fc41 100% | 223.8 MiB/s | 1.1 MiB | 00m00s [102/155] Installing diffutils-0:3.10-8 100% | 232.6 MiB/s | 1.6 MiB | 00m00s [103/155] Installing libpkgconf-0:2.3.0 100% | 0.0 B/s | 87.0 KiB | 00m00s [104/155] Installing pkgconf-0:2.3.0-1. 100% | 92.7 MiB/s | 94.9 KiB | 00m00s [105/155] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 55.6 KiB | 00m00s [106/155] Installing libverto-0:0.3.2-9 100% | 30.3 MiB/s | 31.1 KiB | 00m00s [107/155] Installing krb5-libs-0:1.21.3 100% | 219.8 MiB/s | 2.4 MiB | 00m00s [108/155] Installing libtirpc-0:1.3.6-1 100% | 104.6 MiB/s | 214.3 KiB | 00m00s [109/155] Installing pam-0:1.7.0-3.fc42 100% | 132.8 MiB/s | 1.6 MiB | 00m00s [110/155] Installing libssh-0:0.11.1-1. 100% | 191.2 MiB/s | 587.4 KiB | 00m00s [111/155] Installing jansson-0:2.14-1.f 100% | 92.1 MiB/s | 94.3 KiB | 00m00s [112/155] Installing libgomp-0:14.2.1-6 100% | 258.2 MiB/s | 528.8 KiB | 00m00s [113/155] Installing rpm-build-libs-0:4 100% | 214.1 MiB/s | 219.3 KiB | 00m00s [114/155] Installing json-c-0:0.18-1.fc 100% | 82.2 MiB/s | 84.1 KiB | 00m00s [115/155] Installing xxhash-libs-0:0.8. 100% | 67.8 MiB/s | 69.4 KiB | 00m00s [116/155] Installing libbrotli-0:1.1.0- 100% | 226.4 MiB/s | 927.4 KiB | 00m00s [117/155] Installing libnghttp2-0:1.64. 100% | 174.9 MiB/s | 179.1 KiB | 00m00s [118/155] Installing libtool-ltdl-0:2.5 100% | 0.0 B/s | 69.0 KiB | 00m00s [119/155] Installing openldap-0:2.6.8-6 100% | 214.3 MiB/s | 658.3 KiB | 00m00s [120/155] Installing libcurl-0:8.11.1-1 100% | 210.5 MiB/s | 862.1 KiB | 00m00s [121/155] Installing elfutils-debuginfo 100% | 73.5 MiB/s | 75.3 KiB | 00m00s [122/155] Installing binutils-0:2.43.50 100% | 291.6 MiB/s | 27.4 MiB | 00m00s [123/155] Installing elfutils-0:0.192-7 100% | 293.0 MiB/s | 2.9 MiB | 00m00s [124/155] Installing gdb-minimal-0:15.2 100% | 282.8 MiB/s | 14.7 MiB | 00m00s [125/155] Installing debugedit-0:5.1-2. 100% | 193.9 MiB/s | 198.5 KiB | 00m00s [126/155] Installing curl-0:8.11.1-1.fc 100% | 46.7 MiB/s | 478.3 KiB | 00m00s [127/155] Installing rpm-0:4.20.0-1.fc4 100% | 156.5 MiB/s | 2.5 MiB | 00m00s [128/155] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [129/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [130/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [131/155] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [132/155] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [133/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [134/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [135/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [136/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [137/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [138/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [139/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [140/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [141/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [142/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [143/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [144/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [145/155] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [146/155] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [147/155] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 62.0 KiB | 00m00s [148/155] Installing python-srpm-macros 100% | 0.0 B/s | 52.2 KiB | 00m00s [149/155] Installing redhat-rpm-config- 100% | 94.4 MiB/s | 193.2 KiB | 00m00s [150/155] Installing rpm-build-0:4.20.0 100% | 102.0 MiB/s | 209.0 KiB | 00m00s [151/155] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [152/155] Installing util-linux-0:2.40. 100% | 149.2 MiB/s | 3.7 MiB | 00m00s [153/155] Installing authselect-0:1.5.0 100% | 78.9 MiB/s | 161.7 KiB | 00m00s [154/155] Installing which-0:2.21-42.fc 100% | 84.1 MiB/s | 86.1 KiB | 00m00s [155/155] Installing info-0:7.1.1-2.fc4 100% | 229.5 KiB/s | 409.5 KiB | 00m02s Warning: skipped OpenPGP checks for 153 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.4.3-1.fc42.s390x alternatives-1.30-1.fc41.s390x ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.s390x authselect-1.5.0-8.fc42.s390x authselect-libs-1.5.0-8.fc42.s390x basesystem-11-21.fc41.noarch bash-5.2.37-1.fc42.s390x binutils-2.43.50-9.fc42.s390x build-reproducibility-srpm-macros-0.4.3-1.fc42.noarch bzip2-1.0.8-19.fc41.s390x bzip2-libs-1.0.8-19.fc41.s390x ca-certificates-2024.2.69_v8.0.401-3.fc42.noarch coreutils-9.5-11.fc42.s390x coreutils-common-9.5-11.fc42.s390x cpio-2.15-2.fc41.s390x cracklib-2.9.11-6.fc41.s390x crypto-policies-20241128-1.gitbb7b0b0.fc42.noarch curl-8.11.1-1.fc42.s390x cyrus-sasl-lib-2.1.28-27.fc41.s390x debugedit-5.1-2.fc42.s390x diffutils-3.10-8.fc41.s390x dwz-0.15-8.fc42.s390x ed-1.20.2-2.fc41.s390x efi-srpm-macros-5-13.fc42.noarch elfutils-0.192-7.fc42.s390x elfutils-debuginfod-client-0.192-7.fc42.s390x elfutils-default-yama-scope-0.192-7.fc42.noarch elfutils-libelf-0.192-7.fc42.s390x elfutils-libs-0.192-7.fc42.s390x fedora-gpg-keys-42-0.3.noarch fedora-release-42-0.11.noarch fedora-release-common-42-0.11.noarch fedora-release-identity-basic-42-0.11.noarch fedora-repos-42-0.3.noarch fedora-repos-rawhide-42-0.3.noarch file-5.45-8.fc42.s390x file-libs-5.45-8.fc42.s390x filesystem-3.18-29.fc42.s390x findutils-4.10.0-4.fc41.s390x fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.s390x gdb-minimal-15.2-6.fc42.s390x gdbm-1.23-7.fc41.s390x gdbm-libs-1.23-7.fc41.s390x ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-22.fc42.s390x glibc-common-2.40.9000-22.fc42.s390x glibc-gconv-extra-2.40.9000-22.fc42.s390x glibc-minimal-langpack-2.40.9000-22.fc42.s390x gmp-6.3.0-2.fc41.s390x gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-5.fc42.noarch grep-3.11-9.fc41.s390x gzip-1.13-2.fc41.s390x info-7.1.1-2.fc42.s390x jansson-2.14-1.fc42.s390x json-c-0.18-1.fc42.s390x kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.s390x krb5-libs-1.21.3-3.fc42.s390x libacl-2.3.2-2.fc41.s390x libarchive-3.7.7-1.fc42.s390x libattr-2.5.2-4.fc41.s390x libblkid-2.40.2-8.fc42.s390x libbrotli-1.1.0-5.fc41.s390x libcap-2.71-1.fc42.s390x libcap-ng-0.8.5-3.fc41.s390x libcom_err-1.47.1-6.fc42.s390x libcurl-8.11.1-1.fc42.s390x libeconf-0.7.5-1.fc42.s390x libevent-2.1.12-14.fc41.s390x libfdisk-2.40.2-8.fc42.s390x libffi-3.4.6-3.fc42.s390x libgcc-14.2.1-6.fc42.s390x libgomp-14.2.1-6.fc42.s390x libidn2-2.3.7-2.fc41.s390x libmount-2.40.2-8.fc42.s390x libnghttp2-1.64.0-1.fc42.s390x libpkgconf-2.3.0-1.fc42.s390x libpsl-0.21.5-4.fc41.s390x libpwquality-1.4.5-11.fc41.s390x libselinux-3.8-0.rc1.2.fc42.s390x libsemanage-3.8-0.rc1.1.fc42.s390x libsepol-3.8-0.rc1.1.fc42.s390x libsmartcols-2.40.2-8.fc42.s390x libssh-0.11.1-1.fc42.s390x libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-6.fc42.s390x libtasn1-4.19.0-9.fc41.s390x libtirpc-1.3.6-1.fc42.s390x libtool-ltdl-2.5.4-1.fc42.s390x libunistring-1.1-8.fc41.s390x libuuid-2.40.2-8.fc42.s390x libverto-0.3.2-9.fc41.s390x libxcrypt-4.4.36-11.fc42.s390x libxml2-2.12.8-2.fc41.s390x libzstd-1.5.6-2.fc41.s390x lua-libs-5.4.7-1.fc42.s390x lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.s390x mpfr-4.2.1-5.fc41.s390x ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.s390x ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-6.fc42.s390x openssl-libs-3.2.2-8.fc42.s390x p11-kit-0.25.5-4.fc42.s390x p11-kit-trust-0.25.5-4.fc42.s390x package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.7.0-3.fc42.s390x pam-libs-1.7.0-3.fc42.s390x patch-2.7.6-25.fc41.s390x pcre2-10.44-1.fc41.1.s390x pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.s390x pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.s390x popt-1.19-7.fc41.s390x publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.16.3-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.1-4.fc42.noarch readline-8.2-11.fc42.s390x redhat-rpm-config-296-1.fc42.noarch rpm-4.20.0-1.fc42.s390x rpm-build-4.20.0-1.fc42.s390x rpm-build-libs-4.20.0-1.fc42.s390x rpm-libs-4.20.0-1.fc42.s390x rpm-sequoia-1.7.0-3.fc42.s390x rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.s390x setup-2.15.0-5.fc41.noarch shadow-utils-4.17.0~rc1-1.fc42.s390x sqlite-libs-3.47.2-1.fc42.s390x systemd-libs-257-1.fc42.s390x tar-1.35-4.fc41.s390x unzip-6.0-65.fc42.s390x util-linux-2.40.2-8.fc42.s390x util-linux-core-2.40.2-8.fc42.s390x which-2.21-42.fc41.s390x xxhash-libs-0.8.2-4.fc42.s390x xz-5.6.3-2.fc42.s390x xz-libs-5.6.3-2.fc42.s390x zig-srpm-macros-1-3.fc41.noarch zip-3.0-42.fc42.s390x zlib-ng-compat-2.2.2-1.fc42.s390x zstd-1.5.6-2.fc41.s390x Start: buildsrpm Start: rpmbuild -bs Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1733961600 Wrote: /builddir/build/SRPMS/python-dipy-1.10.0-4.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-s390x-1734111344.275356/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-rhi6quaj/python-dipy/python-dipy.spec) Config(child) 0 minutes 34 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/python-dipy-1.10.0-4.fc42.src.rpm) Config(fedora-rawhide-s390x) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1734111344.275356/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-s390x-bootstrap-1734111344.275356/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-s390x-1734111344.275356/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.s390x rpm-sequoia-1.7.0-3.fc42.s390x dnf5-5.2.8.1-2.fc42.s390x dnf5-plugins-5.2.8.1-2.fc42.s390x Finish: chroot init Start: build phase for python-dipy-1.10.0-4.fc42.src.rpm Start: build setup for python-dipy-1.10.0-4.fc42.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1733961600 Wrote: /builddir/build/SRPMS/python-dipy-1.10.0-4.fc42.src.rpm Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 212.7 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 96.1 KiB/s | 1.5 KiB | 00m00s fedora 100% | 71.9 KiB/s | 3.0 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: gcc-c++ s390x 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 29.5 MiB python3-devel s390x 3.13.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB python3-pytest noarch 8.3.4-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.8 MiB Installing dependencies: annobin-docs noarch 12.79-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 98.6 KiB annobin-plugin-gcc s390x 12.79-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 985.0 KiB cpp s390x 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 26.2 MiB expat s390x 2.6.4-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 308.9 KiB gcc s390x 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.2 MiB gcc-plugin-annobin s390x 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 57.1 KiB glibc-devel s390x 2.40.9000-22.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.6 MiB kernel-headers s390x 6.13.0-0.rc1.e70140ba0d2b.14.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.5 MiB libasan s390x 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB libatomic s390x 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.3 KiB libb2 s390x 0.98.1-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 42.0 KiB libmpc s390x 1.3.1-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 164.5 KiB libstdc++-devel s390x 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15.2 MiB libubsan s390x 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 487.2 KiB libxcrypt-devel s390x 4.4.36-11.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30.5 KiB make s390x 1:4.4.1-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB mpdecimal s390x 2.5.1-16.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 224.7 KiB pyproject-rpm-macros noarch 1.16.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 113.7 KiB python-pip-wheel noarch 24.3.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.1 KiB python3 s390x 3.13.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.4 KiB python3-iniconfig noarch 1.1.1-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.6 KiB python3-libs s390x 3.13.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.0 MiB python3-packaging noarch 24.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 555.7 KiB python3-pluggy noarch 1.5.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 193.2 KiB python3-rpm-generators noarch 14-11.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.4 KiB tzdata noarch 2024b-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB Transaction Summary: Installing: 31 packages Total size of inbound packages is 72 MiB. Need to download 72 MiB. After this operation, 230 MiB extra will be used (install 230 MiB, remove 0 B). [ 1/31] python3-devel-0:3.13.1-2.fc42.s 100% | 10.0 MiB/s | 357.7 KiB | 00m00s [ 2/31] python3-0:3.13.1-2.fc42.s390x 100% | 5.2 MiB/s | 26.6 KiB | 00m00s [ 3/31] python3-iniconfig-0:1.1.1-23.fc 100% | 5.9 MiB/s | 18.1 KiB | 00m00s [ 4/31] python3-packaging-0:24.2-2.fc42 100% | 28.1 MiB/s | 143.6 KiB | 00m00s [ 5/31] python3-pluggy-0:1.5.0-1.fc41.n 100% | 17.3 MiB/s | 53.1 KiB | 00m00s [ 6/31] python3-pytest-0:8.3.4-1.fc42.n 100% | 4.4 MiB/s | 2.0 MiB | 00m00s [ 7/31] python3-libs-0:3.13.1-2.fc42.s3 100% | 5.4 MiB/s | 8.6 MiB | 00m02s [ 8/31] libmpc-0:1.3.1-6.fc41.s390x 100% | 11.9 MiB/s | 73.3 KiB | 00m00s [ 9/31] libstdc++-devel-0:14.2.1-6.fc42 100% | 7.8 MiB/s | 2.6 MiB | 00m00s [10/31] gcc-c++-0:14.2.1-6.fc42.s390x 100% | 3.8 MiB/s | 11.8 MiB | 00m03s [11/31] glibc-devel-0:2.40.9000-22.fc42 100% | 45.9 MiB/s | 563.7 KiB | 00m00s [12/31] libasan-0:14.2.1-6.fc42.s390x 100% | 43.6 MiB/s | 535.7 KiB | 00m00s [13/31] libatomic-0:14.2.1-6.fc42.s390x 100% | 10.6 MiB/s | 43.2 KiB | 00m00s 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Finish: build setup for python-dipy-1.10.0-4.fc42.src.rpm Start: rpmbuild python-dipy-1.10.0-4.fc42.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1733961600 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.4gQDL9 + umask 022 + cd /builddir/build/BUILD/python-dipy-1.10.0-build + test -d /builddir/build/BUILD/python-dipy-1.10.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-dipy-1.10.0-build + /usr/bin/rm -rf /builddir/build/BUILD/python-dipy-1.10.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-dipy-1.10.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-dipy-1.10.0-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.C3GY0N + umask 022 + cd /builddir/build/BUILD/python-dipy-1.10.0-build + cd /builddir/build/BUILD/python-dipy-1.10.0-build + rm -rf dipy-1.10.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/dipy-1.10.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd dipy-1.10.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -i 's/#!\/usr\/bin\/env python[0-9]?/#!\/usr\/bin\/python3/' doc/tools/docgen_cmd.py + sed -i 's/#!\/usr\/bin\/env python[0-9]?/#!\/usr\/bin\/python3/' doc/tools/build_modref_templates.py + find tools/ -name '*.py' -exec sed -i 's/#!\/usr\/bin\/env python[0-9]?/#!\/usr\/bin\/python3/' '{}' ';' + for f in "dipy/stats/resampling.py" "dipy/reconst/dki.py" "dipy/reconst/dti.py" "dipy/workflows/mask.py" "dipy/workflows/tracking.py" "dipy/reconst/dki_micro.py" "dipy/reconst/msdki.py" "dipy/workflows/tests/test_stats.py" + chmod -x dipy/stats/resampling.py + sed -i '/^#!\/usr\/bin\/env python/ d' dipy/stats/resampling.py + sed -i '/^#!\/usr\/bin\/python/ d' dipy/stats/resampling.py + for f in "dipy/stats/resampling.py" "dipy/reconst/dki.py" "dipy/reconst/dti.py" "dipy/workflows/mask.py" "dipy/workflows/tracking.py" "dipy/reconst/dki_micro.py" "dipy/reconst/msdki.py" "dipy/workflows/tests/test_stats.py" + chmod -x dipy/reconst/dki.py + sed -i '/^#!\/usr\/bin\/env python/ d' dipy/reconst/dki.py + sed -i '/^#!\/usr\/bin\/python/ d' dipy/reconst/dki.py + for f in "dipy/stats/resampling.py" "dipy/reconst/dki.py" "dipy/reconst/dti.py" "dipy/workflows/mask.py" "dipy/workflows/tracking.py" "dipy/reconst/dki_micro.py" "dipy/reconst/msdki.py" "dipy/workflows/tests/test_stats.py" + chmod -x dipy/reconst/dti.py + sed -i '/^#!\/usr\/bin\/env python/ d' dipy/reconst/dti.py + sed -i '/^#!\/usr\/bin\/python/ d' dipy/reconst/dti.py + for f in "dipy/stats/resampling.py" "dipy/reconst/dki.py" "dipy/reconst/dti.py" "dipy/workflows/mask.py" "dipy/workflows/tracking.py" "dipy/reconst/dki_micro.py" "dipy/reconst/msdki.py" "dipy/workflows/tests/test_stats.py" + chmod -x dipy/workflows/mask.py + sed -i '/^#!\/usr\/bin\/env python/ d' dipy/workflows/mask.py + sed -i '/^#!\/usr\/bin\/python/ d' dipy/workflows/mask.py + for f in "dipy/stats/resampling.py" "dipy/reconst/dki.py" "dipy/reconst/dti.py" "dipy/workflows/mask.py" "dipy/workflows/tracking.py" "dipy/reconst/dki_micro.py" "dipy/reconst/msdki.py" "dipy/workflows/tests/test_stats.py" + chmod -x dipy/workflows/tracking.py + sed -i '/^#!\/usr\/bin\/env python/ d' dipy/workflows/tracking.py + sed -i '/^#!\/usr\/bin\/python/ d' dipy/workflows/tracking.py + for f in "dipy/stats/resampling.py" "dipy/reconst/dki.py" "dipy/reconst/dti.py" "dipy/workflows/mask.py" "dipy/workflows/tracking.py" "dipy/reconst/dki_micro.py" "dipy/reconst/msdki.py" "dipy/workflows/tests/test_stats.py" + chmod -x dipy/reconst/dki_micro.py + sed -i '/^#!\/usr\/bin\/env python/ d' dipy/reconst/dki_micro.py + sed -i '/^#!\/usr\/bin\/python/ d' dipy/reconst/dki_micro.py + for f in "dipy/stats/resampling.py" "dipy/reconst/dki.py" "dipy/reconst/dti.py" "dipy/workflows/mask.py" "dipy/workflows/tracking.py" "dipy/reconst/dki_micro.py" "dipy/reconst/msdki.py" "dipy/workflows/tests/test_stats.py" + chmod -x dipy/reconst/msdki.py + sed -i '/^#!\/usr\/bin\/env python/ d' dipy/reconst/msdki.py + sed -i '/^#!\/usr\/bin\/python/ d' dipy/reconst/msdki.py + for f in "dipy/stats/resampling.py" "dipy/reconst/dki.py" "dipy/reconst/dti.py" "dipy/workflows/mask.py" "dipy/workflows/tracking.py" "dipy/reconst/dki_micro.py" "dipy/reconst/msdki.py" "dipy/workflows/tests/test_stats.py" + chmod -x dipy/workflows/tests/test_stats.py + sed -i '/^#!\/usr\/bin\/env python/ d' dipy/workflows/tests/test_stats.py + sed -i '/^#!\/usr\/bin\/python/ d' dipy/workflows/tests/test_stats.py + chmod a-x doc/examples/affine_registration_3d.py doc/examples/affine_registration_masks.py doc/examples/afq_tract_profiles.py doc/examples/brain_extraction_dwi.py doc/examples/bundle_assignment_maps.py doc/examples/bundle_extraction.py doc/examples/bundle_group_registration.py doc/examples/bundle_registration.py doc/examples/bundle_shape_similarity.py doc/examples/bundlewarp_registration.py doc/examples/cluster_confidence.py doc/examples/combined_workflow_creation.py doc/examples/contextual_enhancement.py doc/examples/denoise_ascm.py doc/examples/denoise_gibbs.py doc/examples/denoise_localpca.py doc/examples/denoise_mppca.py doc/examples/denoise_nlmeans.py doc/examples/denoise_patch2self.py doc/examples/fast_streamline_search.py doc/examples/fiber_to_bundle_coherence.py doc/examples/gradients_spheres.py doc/examples/histology_resdnn.py doc/examples/kfold_xval.py doc/examples/linear_fascicle_evaluation.py doc/examples/motion_correction.py doc/examples/path_length_map.py doc/examples/piesno.py doc/examples/quick_start.py doc/examples/reconst_bingham.py doc/examples/reconst_csa.py doc/examples/reconst_csa_parallel.py doc/examples/reconst_csd.py doc/examples/reconst_csd_parallel.py doc/examples/reconst_cti.py doc/examples/reconst_dki.py doc/examples/reconst_dki_micro.py doc/examples/reconst_dsi.py doc/examples/reconst_dsi_metrics.py doc/examples/reconst_dsid.py doc/examples/reconst_dti.py doc/examples/reconst_forecast.py doc/examples/reconst_fwdti.py doc/examples/reconst_gqi.py doc/examples/reconst_ivim.py doc/examples/reconst_mapmri.py doc/examples/reconst_mcsd.py doc/examples/reconst_msdki.py doc/examples/reconst_qtdmri.py doc/examples/reconst_qti.py doc/examples/reconst_qtiplus.py doc/examples/reconst_rumba.py doc/examples/reconst_sfm.py doc/examples/reconst_sh.py doc/examples/reconst_shore.py doc/examples/reconst_shore_metrics.py doc/examples/register_binary_fuzzy.py doc/examples/reslice_datasets.py doc/examples/restore_dti.py doc/examples/segment_clustering_features.py doc/examples/segment_clustering_metrics.py doc/examples/segment_extending_clustering_framework.py doc/examples/segment_quickbundles.py doc/examples/simulate_dki.py doc/examples/simulate_multi_tensor.py doc/examples/snr_in_cc.py doc/examples/streamline_formats.py doc/examples/streamline_length.py doc/examples/streamline_registration.py doc/examples/streamline_tools.py doc/examples/surface_seed.py doc/examples/syn_registration_2d.py doc/examples/syn_registration_3d.py doc/examples/tissue_classification.py doc/examples/tracking_bootstrap_peaks.py doc/examples/tracking_deterministic.py doc/examples/tracking_introduction_eudx.py doc/examples/tracking_pft.py doc/examples/tracking_probabilistic.py doc/examples/tracking_ptt.py doc/examples/tracking_rumba.py doc/examples/tracking_sfm.py doc/examples/tracking_stopping_criterion.py doc/examples/viz_advanced.py doc/examples/viz_bundles.py doc/examples/viz_roi_contour.py doc/examples/viz_slice.py doc/examples/workflow_creation.py + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.xw1UO5 + umask 022 + cd /builddir/build/BUILD/python-dipy-1.10.0-build + cd dipy-1.10.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/pyproject-wheeldir --output /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-buildrequires -p Handling meson-python>=0.13.1 from build-system.requires Requirement not satisfied: meson-python>=0.13.1 Handling Cython>=3.0.4 from build-system.requires Requirement not satisfied: Cython>=3.0.4 Handling packaging>21.0 from build-system.requires Requirement satisfied: packaging>21.0 (installed: packaging 24.2) Handling wheel from build-system.requires Requirement not satisfied: wheel Handling numpy>=2.0.0rc1; python_version>='3.9' and platform_python_implementation!='PyPy' from build-system.requires Requirement not satisfied: numpy>=2.0.0rc1; python_version>='3.9' and platform_python_implementation!='PyPy' Handling numpy; python_version>='3.9' and platform_python_implementation=='PyPy' from build-system.requires Ignoring alien requirement: numpy; python_version>='3.9' and platform_python_implementation=='PyPy' Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-dipy-1.10.0-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 39.8 KiB/s | 3.0 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 225.2 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 96.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: python3-cython s390x 3.0.11-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 18.3 MiB python3-meson-python noarch 0.17.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 277.7 KiB python3-numpy s390x 1:2.2.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 36.0 MiB python3-pip noarch 24.3.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.3 MiB python3-wheel noarch 1:0.44.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 521.0 KiB Installing dependencies: emacs-filesystem noarch 1:30.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B flexiblas s390x 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 48.5 KiB flexiblas-netlib s390x 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12.4 MiB flexiblas-openblas-openmp s390x 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43.1 KiB libgfortran s390x 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB meson noarch 1.5.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.4 MiB ninja-build s390x 1.12.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 439.5 KiB openblas s390x 0.3.28-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106.6 KiB openblas-openmp s390x 0.3.28-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15.2 MiB patchelf s390x 0.18.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 294.9 KiB python3-pyproject-metadata noarch 0.8.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 92.0 KiB python3-setuptools noarch 74.1.3-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.4 MiB vim-filesystem noarch 2:9.1.906-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.0 B Transaction Summary: Installing: 18 packages Package "gcc-c++-14.2.1-6.fc42.s390x" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.s390x" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Total size of inbound packages is 26 MiB. Need to download 26 MiB. After this operation, 117 MiB extra will be used (install 117 MiB, remove 0 B). Unexpected error 9 on netlink descriptor 14. WARNING: DNF5 command failed, retrying, attempt #2, sleeping 10s Updating and loading repositories: fedora 100% | 25.8 KiB/s | 3.0 KiB | 00m00s Copr repository 100% | 96.1 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 191.4 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package "gcc-c++-14.2.1-6.fc42.s390x" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.s390x" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package Arch Version Repository Size Installing: python3-cython s390x 3.0.11-1.fc41 copr_base 18.3 MiB python3-meson-python noarch 0.17.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 277.7 KiB python3-numpy s390x 1:2.2.0-1.fc42 copr_base 36.0 MiB python3-pip noarch 24.3.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.3 MiB python3-wheel noarch 1:0.44.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 521.0 KiB Installing dependencies: emacs-filesystem noarch 1:30.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B flexiblas s390x 3.4.4-3.fc41 copr_base 48.5 KiB flexiblas-netlib s390x 3.4.4-3.fc41 copr_base 12.4 MiB flexiblas-openblas-openmp s390x 3.4.4-3.fc41 copr_base 43.1 KiB libgfortran s390x 14.2.1-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB meson noarch 1.5.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.4 MiB ninja-build s390x 1.12.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 439.5 KiB openblas s390x 0.3.28-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106.6 KiB openblas-openmp s390x 0.3.28-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15.2 MiB patchelf s390x 0.18.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 294.9 KiB python3-pyproject-metadata noarch 0.8.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 92.0 KiB python3-setuptools noarch 74.1.3-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.4 MiB vim-filesystem noarch 2:9.1.906-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.0 B Transaction Summary: Installing: 18 packages Total size of inbound packages is 26 MiB. Need to download 26 MiB. After this operation, 117 MiB extra will be used (install 117 MiB, remove 0 B). [ 1/18] python3-meson-python-0:0.17.1-1 100% | 2.7 MiB/s | 81.2 KiB | 00m00s [ 2/18] python3-numpy-1:2.2.0-1.fc42.s3 100% | 121.3 MiB/s | 6.8 MiB | 00m00s [ 3/18] python3-wheel-1:0.44.0-1.fc42.n 100% | 7.1 MiB/s | 153.5 KiB | 00m00s [ 4/18] python3-cython-0:3.0.11-1.fc41. 100% | 27.3 MiB/s | 3.9 MiB | 00m00s [ 5/18] patchelf-0:0.18.0-5.fc41.s390x 100% | 7.0 MiB/s | 129.8 KiB | 00m00s [ 6/18] python3-pyproject-metadata-0:0. 100% | 10.2 MiB/s | 31.3 KiB | 00m00s [ 7/18] ninja-build-0:1.12.1-3.fc41.s39 100% | 29.2 MiB/s | 179.5 KiB | 00m00s [ 8/18] python3-setuptools-0:74.1.3-4.f 100% | 4.1 MiB/s | 1.8 MiB | 00m00s [ 9/18] flexiblas-netlib-0:3.4.4-3.fc41 100% | 204.4 MiB/s | 3.9 MiB | 00m00s [10/18] flexiblas-0:3.4.4-3.fc41.s390x 100% | 2.8 MiB/s | 25.7 KiB | 00m00s [11/18] flexiblas-openblas-openmp-0:3.4 100% | 403.9 KiB/s | 17.8 KiB | 00m00s [12/18] libgfortran-0:14.2.1-6.fc42.s39 100% | 40.0 MiB/s | 614.9 KiB | 00m00s [13/18] emacs-filesystem-1:30.0-3.fc41. 100% | 2.3 MiB/s | 7.1 KiB | 00m00s [14/18] vim-filesystem-2:9.1.906-1.fc42 100% | 5.3 MiB/s | 16.4 KiB | 00m00s [15/18] meson-0:1.5.1-1.fc42.noarch 100% | 3.1 MiB/s | 2.0 MiB | 00m01s [16/18] openblas-0:0.3.28-2.fc42.s390x 100% | 10.0 MiB/s | 40.9 KiB | 00m00s [17/18] python3-pip-0:24.3.1-1.fc42.noa 100% | 2.9 MiB/s | 2.5 MiB | 00m01s [18/18] openblas-openmp-0:0.3.28-2.fc42 100% | 2.9 MiB/s | 4.3 MiB | 00m01s -------------------------------------------------------------------------------- [18/18] Total 100% | 12.1 MiB/s | 26.5 MiB | 00m02s Running transaction [ 1/20] Verify package files 100% | 193.0 B/s | 18.0 B | 00m00s [ 2/20] Prepare transaction 100% | 339.0 B/s | 18.0 B | 00m00s [ 3/20] Installing libgfortran-0:14.2.1 100% | 270.4 MiB/s | 2.2 MiB | 00m00s [ 4/20] Installing openblas-0:0.3.28-2. 100% | 0.0 B/s | 108.3 KiB | 00m00s [ 5/20] Installing openblas-openmp-0:0. 100% | 292.1 MiB/s | 15.2 MiB | 00m00s [ 6/20] Installing flexiblas-0:3.4.4-3. 100% | 0.0 B/s | 49.7 KiB | 00m00s [ 7/20] Installing flexiblas-openblas-o 100% | 0.0 B/s | 44.0 KiB | 00m00s [ 8/20] Installing flexiblas-netlib-0:3 100% | 302.4 MiB/s | 12.4 MiB | 00m00s [ 9/20] Installing vim-filesystem-2:9.1 100% | 0.0 B/s | 4.7 KiB | 00m00s [10/20] Installing emacs-filesystem-1:3 100% | 0.0 B/s | 544.0 B | 00m00s [11/20] Installing ninja-build-0:1.12.1 100% | 108.1 MiB/s | 442.7 KiB | 00m00s [12/20] Installing python3-setuptools-0 100% | 214.0 MiB/s | 8.6 MiB | 00m00s [13/20] Installing meson-0:1.5.1-1.fc42 100% | 303.1 MiB/s | 11.5 MiB | 00m00s [14/20] Installing python3-pyproject-me 100% | 92.7 MiB/s | 95.0 KiB | 00m00s [15/20] Installing patchelf-0:0.18.0-5. 100% | 144.9 MiB/s | 296.7 KiB | 00m00s [16/20] Installing python3-meson-python 100% | 69.3 MiB/s | 283.7 KiB | 00m00s [17/20] Installing python3-numpy-1:2.2. 100% | 297.7 MiB/s | 36.3 MiB | 00m00s [18/20] Installing python3-wheel-1:0.44 100% | 88.0 MiB/s | 540.6 KiB | 00m00s [19/20] Installing python3-pip-0:24.3.1 100% | 187.4 MiB/s | 11.6 MiB | 00m00s [20/20] Installing python3-cython-0:3.0 100% | 209.4 MiB/s | 18.4 MiB | 00m00s Warning: skipped OpenPGP checks for 18 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1733961600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.egRwUn + umask 022 + cd /builddir/build/BUILD/python-dipy-1.10.0-build + cd dipy-1.10.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/pyproject-wheeldir --output /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-buildrequires -p Handling meson-python>=0.13.1 from build-system.requires Requirement satisfied: meson-python>=0.13.1 (installed: meson-python 0.17.1) Handling Cython>=3.0.4 from build-system.requires Requirement satisfied: Cython>=3.0.4 (installed: Cython 3.0.11) Handling packaging>21.0 from build-system.requires Requirement satisfied: packaging>21.0 (installed: packaging 24.2) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.44.0) Handling numpy>=2.0.0rc1; python_version>='3.9' and platform_python_implementation!='PyPy' from build-system.requires Requirement satisfied: numpy>=2.0.0rc1; python_version>='3.9' and platform_python_implementation!='PyPy' (installed: numpy 2.2.0) Handling numpy; python_version>='3.9' and platform_python_implementation=='PyPy' from build-system.requires Ignoring alien requirement: numpy; python_version>='3.9' and platform_python_implementation=='PyPy' Handling numpy>=1.22.4 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: numpy>=1.22.4 (installed: numpy 2.2.0) Handling scipy>=1.8 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement not satisfied: scipy>=1.8 Handling nibabel>=3.0.0 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement not satisfied: nibabel>=3.0.0 Handling h5py>=3.1.0 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement not satisfied: h5py>=3.1.0 Handling packaging>=21 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: packaging>=21 (installed: packaging 24.2) Handling tqdm>=4.30.0 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement not satisfied: tqdm>=4.30.0 Handling trx-python>=0.2.9 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement not satisfied: trx-python>=0.2.9 Handling dipy[dev,doc,style,test, viz, ml, extra] from pyproject.toml generated metadata: [optional-dependencies] all (dipy) Ignoring alien requirement: dipy[dev,doc,style,test, viz, ml, extra] Handling ruff from pyproject.toml generated metadata: [optional-dependencies] style (dipy) Ignoring alien requirement: ruff Handling pre-commit from pyproject.toml generated metadata: [optional-dependencies] style (dipy) Ignoring alien requirement: pre-commit Handling fury>=0.10.0 from pyproject.toml generated metadata: [optional-dependencies] viz (dipy) Ignoring alien requirement: fury>=0.10.0 Handling matplotlib from pyproject.toml generated metadata: [optional-dependencies] viz (dipy) Ignoring alien requirement: matplotlib Handling pytest from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: pytest Handling coverage from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: coverage Handling coveralls from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: coveralls Handling codecov from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: codecov Handling asv from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: asv Handling scikit_learn from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: scikit_learn Handling pandas from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: pandas Handling statsmodels>=0.14.0 from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: statsmodels>=0.14.0 Handling tables from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: tables Handling tensorflow from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: tensorflow Handling torch from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: torch Handling meson-python>=0.13 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: meson-python>=0.13 Handling wheel from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: wheel Handling setuptools~=69.5 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: setuptools~=69.5 Handling packaging>=21 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: packaging>=21 Handling ninja from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: ninja Handling Cython>=0.29.35 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: Cython>=0.29.35 Handling numpy>=1.22.4 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: numpy>=1.22.4 Handling spin>=0.5 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: spin>=0.5 Handling build from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: build Handling dipy[viz, ml] from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: dipy[viz, ml] Handling cvxpy from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: cvxpy Handling scikit-image from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: scikit-image Handling boto3 from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: boto3 Handling numpydoc from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: numpydoc Handling sphinx>=7.2.6 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinx>=7.2.6 Handling texext from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: texext Handling tomli; python_version < "3.11" from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: tomli; python_version < "3.11" Handling sphinxcontrib-bibtex from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinxcontrib-bibtex Handling sphinx_design from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinx_design Handling sphinx-gallery>=0.10.0 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinx-gallery>=0.10.0 Handling tomli>=2.0.1 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: tomli>=2.0.1 Handling grg-sphinx-theme>=0.4.0 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: grg-sphinx-theme>=0.4.0 Handling Jinja2 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: Jinja2 + cat /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-dipy-1.10.0-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 13.9 KiB/s | 3.0 KiB | 00m00s Copr repository 100% | 80.9 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 106.3 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Failed to resolve the transaction: Package "gcc-c++-14.2.1-6.fc42.s390x" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.s390x" is already installed. Package "python3-cython-3.0.11-1.fc41.s390x" is already installed. Package "python3-meson-python-0.17.1-1.fc42.noarch" is already installed. Package "python3-numpy-1:2.2.0-1.fc42.s390x" is already installed. Package "python3-numpy-1:2.2.0-1.fc42.s390x" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-pip-24.3.1-1.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package "python3-wheel-1:0.44.0-1.fc42.noarch" is already installed. Problem: cannot install the best candidate for the job - nothing provides libhdf5.so.200()(64bit) needed by python3-h5py-3.12.1-3.fc42.s390x from copr_base - nothing provides libhdf5_hl.so.200()(64bit) needed by python3-h5py-3.12.1-3.fc42.s390x from copr_base - nothing provides hdf5(s390-64) = 1.12.1 needed by python3-h5py-3.12.1-3.fc42.s390x from copr_base You can try to add to command line: --no-best to not limit the transaction to the best candidates WARNING: DNF5 command failed, retrying, attempt #2, sleeping 10s Updating and loading repositories: fedora 100% | 24.0 KiB/s | 3.0 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 225.2 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 25.2 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "gcc-c++-14.2.1-6.fc42.s390x" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.s390x" is already installed. Package "python3-cython-3.0.11-1.fc41.s390x" is already installed. Package "python3-meson-python-0.17.1-1.fc42.noarch" is already installed. Package "python3-numpy-1:2.2.0-1.fc42.s390x" is already installed. Package "python3-numpy-1:2.2.0-1.fc42.s390x" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-pip-24.3.1-1.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package "python3-wheel-1:0.44.0-1.fc42.noarch" is already installed. Package Arch Version Repository Size Installing: python3-h5py s390x 3.12.1-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.7 MiB python3-nibabel noarch 5.3.2-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12.7 MiB python3-scipy s390x 1.14.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 70.0 MiB python3-tqdm noarch 4.67.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 566.8 KiB python3-trx-python noarch 0.3-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 285.9 KiB Installing dependencies: hdf5 s390x 1.14.5-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.4 MiB libaec s390x 1.1.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 117.7 KiB liblzf s390x 3.6-29.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 53.3 KiB python3-cached_property noarch 2.0.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 34.8 KiB python3-charset-normalizer noarch 3.4.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 319.9 KiB python3-deepdiff noarch 8.0.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 646.3 KiB python3-idna noarch 3.10-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 628.0 KiB python3-numpy-f2py s390x 1:2.2.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB python3-orderly-set noarch 5.2.2-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 103.2 KiB python3-platformdirs noarch 4.2.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 168.6 KiB python3-pooch noarch 1.8.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 625.5 KiB python3-requests noarch 2.32.3-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 485.9 KiB python3-six noarch 1.16.0-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 118.3 KiB python3-urllib3 noarch 2.2.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB Transaction Summary: Installing: 19 packages Total size of inbound packages is 27 MiB. Need to download 27 MiB. After this operation, 102 MiB extra will be used (install 102 MiB, remove 0 B). [ 1/19] python3-h5py-0:3.12.1-3.fc42.s3 100% | 4.6 MiB/s | 1.2 MiB | 00m00s [ 2/19] python3-tqdm-0:4.67.1-1.fc42.no 100% | 25.7 MiB/s | 158.1 KiB | 00m00s [ 3/19] python3-trx-python-0:0.3-2.fc41 100% | 22.9 MiB/s | 93.8 KiB | 00m00s [ 4/19] python3-deepdiff-0:8.0.1-1.fc42 100% | 25.6 MiB/s | 183.5 KiB | 00m00s [ 5/19] python3-numpy-f2py-1:2.2.0-1.fc 100% | 39.8 MiB/s | 448.1 KiB | 00m00s [ 6/19] python3-pooch-0:1.8.2-3.fc41.no 100% | 20.6 MiB/s | 126.4 KiB | 00m00s [ 7/19] python3-platformdirs-0:4.2.2-2. 100% | 10.0 MiB/s | 41.0 KiB | 00m00s [ 8/19] python3-requests-0:2.32.3-3.fc4 100% | 29.1 MiB/s | 149.0 KiB | 00m00s [ 9/19] python3-nibabel-0:5.3.2-3.fc42. 100% | 4.0 MiB/s | 3.6 MiB | 00m01s [10/19] liblzf-0:3.6-29.fc41.s390x 100% | 6.7 MiB/s | 27.6 KiB | 00m00s [11/19] python3-cached_property-0:2.0.1 100% | 4.9 MiB/s | 19.9 KiB | 00m00s [12/19] python3-six-0:1.16.0-23.fc41.no 100% | 10.1 MiB/s | 41.2 KiB | 00m00s [13/19] python3-orderly-set-0:5.2.2-3.f 100% | 2.5 MiB/s | 32.6 KiB | 00m00s [14/19] libaec-0:1.1.3-1.fc42.s390x 100% | 5.7 MiB/s | 40.5 KiB | 00m00s [15/19] python3-charset-normalizer-0:3. 100% | 19.8 MiB/s | 101.4 KiB | 00m00s [16/19] hdf5-0:1.14.5-1.fc42.s390x 100% | 3.4 MiB/s | 2.2 MiB | 00m01s [17/19] python3-idna-0:3.10-1.fc42.noar 100% | 15.6 MiB/s | 111.7 KiB | 00m00s [18/19] python3-urllib3-0:2.2.3-3.fc42. 100% | 21.1 MiB/s | 259.0 KiB | 00m00s [19/19] python3-scipy-0:1.14.1-1.fc42.s 100% | 3.6 MiB/s | 17.9 MiB | 00m05s -------------------------------------------------------------------------------- [19/19] Total 100% | 5.4 MiB/s | 26.6 MiB | 00m05s Running transaction [ 1/21] Verify package files 100% | 228.0 B/s | 19.0 B | 00m00s [ 2/21] Prepare transaction 100% | 327.0 B/s | 19.0 B | 00m00s [ 3/21] Installing python3-idna-0:3.10- 100% | 206.5 MiB/s | 634.3 KiB | 00m00s [ 4/21] Installing python3-urllib3-0:2. 100% | 200.3 MiB/s | 1.0 MiB | 00m00s [ 5/21] Installing python3-charset-norm 100% | 161.0 MiB/s | 329.8 KiB | 00m00s [ 6/21] Installing python3-requests-0:2 100% | 162.1 MiB/s | 498.0 KiB | 00m00s [ 7/21] Installing libaec-0:1.1.3-1.fc4 100% | 117.3 MiB/s | 120.1 KiB | 00m00s [ 8/21] Installing hdf5-0:1.14.5-1.fc42 100% | 263.9 MiB/s | 7.4 MiB | 00m00s [ 9/21] Installing python3-orderly-set- 100% | 104.2 MiB/s | 106.7 KiB | 00m00s [10/21] Installing python3-deepdiff-0:8 100% | 213.9 MiB/s | 656.9 KiB | 00m00s [11/21] Installing python3-six-0:1.16.0 100% | 117.9 MiB/s | 120.7 KiB | 00m00s [12/21] Installing python3-cached_prope 100% | 0.0 B/s | 37.5 KiB | 00m00s [13/21] Installing liblzf-0:3.6-29.fc41 100% | 54.4 MiB/s | 55.7 KiB | 00m00s [14/21] Installing python3-platformdirs 100% | 170.9 MiB/s | 175.0 KiB | 00m00s [15/21] Installing python3-pooch-0:1.8. 100% | 156.4 MiB/s | 640.5 KiB | 00m00s [16/21] Installing python3-numpy-f2py-1 100% | 159.0 MiB/s | 2.1 MiB | 00m00s [17/21] Installing python3-nibabel-0:5. 100% | 291.6 MiB/s | 12.8 MiB | 00m00s [18/21] Installing python3-trx-python-0 100% | 48.0 MiB/s | 295.2 KiB | 00m00s [19/21] Installing python3-scipy-0:1.14 100% | 285.1 MiB/s | 70.4 MiB | 00m00s [20/21] Installing python3-h5py-0:3.12. 100% | 247.3 MiB/s | 4.7 MiB | 00m00s [21/21] Installing python3-tqdm-0:4.67. 100% | 22.2 MiB/s | 590.0 KiB | 00m00s Warning: skipped OpenPGP checks for 19 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1733961600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.kzCHsW + umask 022 + cd /builddir/build/BUILD/python-dipy-1.10.0-build + cd dipy-1.10.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/pyproject-wheeldir --output /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-buildrequires -p Handling meson-python>=0.13.1 from build-system.requires Requirement satisfied: meson-python>=0.13.1 (installed: meson-python 0.17.1) Handling Cython>=3.0.4 from build-system.requires Requirement satisfied: Cython>=3.0.4 (installed: Cython 3.0.11) Handling packaging>21.0 from build-system.requires Requirement satisfied: packaging>21.0 (installed: packaging 24.2) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.44.0) Handling numpy>=2.0.0rc1; python_version>='3.9' and platform_python_implementation!='PyPy' from build-system.requires Requirement satisfied: numpy>=2.0.0rc1; python_version>='3.9' and platform_python_implementation!='PyPy' (installed: numpy 2.2.0) Handling numpy; python_version>='3.9' and platform_python_implementation=='PyPy' from build-system.requires Ignoring alien requirement: numpy; python_version>='3.9' and platform_python_implementation=='PyPy' Handling numpy>=1.22.4 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: numpy>=1.22.4 (installed: numpy 2.2.0) Handling scipy>=1.8 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: scipy>=1.8 (installed: scipy 1.14.1) Handling nibabel>=3.0.0 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: nibabel>=3.0.0 (installed: nibabel 5.3.2) Handling h5py>=3.1.0 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: h5py>=3.1.0 (installed: h5py 3.12.1) Handling packaging>=21 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: packaging>=21 (installed: packaging 24.2) Handling tqdm>=4.30.0 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: tqdm>=4.30.0 (installed: tqdm 4.67.1) Handling trx-python>=0.2.9 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: trx-python>=0.2.9 (installed: trx-python 0.3) Handling dipy[dev,doc,style,test, viz, ml, extra] from pyproject.toml generated metadata: [optional-dependencies] all (dipy) Ignoring alien requirement: dipy[dev,doc,style,test, viz, ml, extra] Handling ruff from pyproject.toml generated metadata: [optional-dependencies] style (dipy) Ignoring alien requirement: ruff Handling pre-commit from pyproject.toml generated metadata: [optional-dependencies] style (dipy) Ignoring alien requirement: pre-commit Handling fury>=0.10.0 from pyproject.toml generated metadata: [optional-dependencies] viz (dipy) Ignoring alien requirement: fury>=0.10.0 Handling matplotlib from pyproject.toml generated metadata: [optional-dependencies] viz (dipy) Ignoring alien requirement: matplotlib Handling pytest from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: pytest Handling coverage from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: coverage Handling coveralls from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: coveralls Handling codecov from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: codecov Handling asv from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: asv Handling scikit_learn from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: scikit_learn Handling pandas from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: pandas Handling statsmodels>=0.14.0 from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: statsmodels>=0.14.0 Handling tables from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: tables Handling tensorflow from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: tensorflow Handling torch from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: torch Handling meson-python>=0.13 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: meson-python>=0.13 Handling wheel from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: wheel Handling setuptools~=69.5 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: setuptools~=69.5 Handling packaging>=21 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: packaging>=21 Handling ninja from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: ninja Handling Cython>=0.29.35 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: Cython>=0.29.35 Handling numpy>=1.22.4 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: numpy>=1.22.4 Handling spin>=0.5 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: spin>=0.5 Handling build from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: build Handling dipy[viz, ml] from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: dipy[viz, ml] Handling cvxpy from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: cvxpy Handling scikit-image from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: scikit-image Handling boto3 from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: boto3 Handling numpydoc from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: numpydoc Handling sphinx>=7.2.6 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinx>=7.2.6 Handling texext from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: texext Handling tomli; python_version < "3.11" from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: tomli; python_version < "3.11" Handling sphinxcontrib-bibtex from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinxcontrib-bibtex Handling sphinx_design from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinx_design Handling sphinx-gallery>=0.10.0 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinx-gallery>=0.10.0 Handling tomli>=2.0.1 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: tomli>=2.0.1 Handling grg-sphinx-theme>=0.4.0 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: grg-sphinx-theme>=0.4.0 Handling Jinja2 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: Jinja2 + cat /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-dipy-1.10.0-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 51.2 KiB/s | 3.0 KiB | 00m00s Copr repository 100% | 76.9 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 182.3 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package "gcc-c++-14.2.1-6.fc42.s390x" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.s390x" is already installed. Package "python3-cython-3.0.11-1.fc41.s390x" is already installed. Package "python3-h5py-3.12.1-3.fc42.s390x" is already installed. Package "python3-meson-python-0.17.1-1.fc42.noarch" is already installed. Package "python3-nibabel-5.3.2-3.fc42.noarch" is already installed. Package "python3-numpy-1:2.2.0-1.fc42.s390x" is already installed. Package "python3-numpy-1:2.2.0-1.fc42.s390x" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-pip-24.3.1-1.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package "python3-scipy-1.14.1-1.fc42.s390x" is already installed. Package "python3-tqdm-4.67.1-1.fc42.noarch" is already installed. Package "python3-trx-python-0.3-2.fc41.noarch" is already installed. Package "python3-wheel-1:0.44.0-1.fc42.noarch" is already installed. Nothing to do. Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1733961600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.cbIKWr + umask 022 + cd /builddir/build/BUILD/python-dipy-1.10.0-build + cd dipy-1.10.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/pyproject-wheeldir --output /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-buildrequires -p Handling meson-python>=0.13.1 from build-system.requires Requirement satisfied: meson-python>=0.13.1 (installed: meson-python 0.17.1) Handling Cython>=3.0.4 from build-system.requires Requirement satisfied: Cython>=3.0.4 (installed: Cython 3.0.11) Handling packaging>21.0 from build-system.requires Requirement satisfied: packaging>21.0 (installed: packaging 24.2) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.44.0) Handling numpy>=2.0.0rc1; python_version>='3.9' and platform_python_implementation!='PyPy' from build-system.requires Requirement satisfied: numpy>=2.0.0rc1; python_version>='3.9' and platform_python_implementation!='PyPy' (installed: numpy 2.2.0) Handling numpy; python_version>='3.9' and platform_python_implementation=='PyPy' from build-system.requires Ignoring alien requirement: numpy; python_version>='3.9' and platform_python_implementation=='PyPy' Handling numpy>=1.22.4 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: numpy>=1.22.4 (installed: numpy 2.2.0) Handling scipy>=1.8 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: scipy>=1.8 (installed: scipy 1.14.1) Handling nibabel>=3.0.0 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: nibabel>=3.0.0 (installed: nibabel 5.3.2) Handling h5py>=3.1.0 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: h5py>=3.1.0 (installed: h5py 3.12.1) Handling packaging>=21 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: packaging>=21 (installed: packaging 24.2) Handling tqdm>=4.30.0 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: tqdm>=4.30.0 (installed: tqdm 4.67.1) Handling trx-python>=0.2.9 from pyproject.toml generated metadata: [dependencies] (dipy) Requirement satisfied: trx-python>=0.2.9 (installed: trx-python 0.3) Handling dipy[dev,doc,style,test, viz, ml, extra] from pyproject.toml generated metadata: [optional-dependencies] all (dipy) Ignoring alien requirement: dipy[dev,doc,style,test, viz, ml, extra] Handling ruff from pyproject.toml generated metadata: [optional-dependencies] style (dipy) Ignoring alien requirement: ruff Handling pre-commit from pyproject.toml generated metadata: [optional-dependencies] style (dipy) Ignoring alien requirement: pre-commit Handling fury>=0.10.0 from pyproject.toml generated metadata: [optional-dependencies] viz (dipy) Ignoring alien requirement: fury>=0.10.0 Handling matplotlib from pyproject.toml generated metadata: [optional-dependencies] viz (dipy) Ignoring alien requirement: matplotlib Handling pytest from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: pytest Handling coverage from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: coverage Handling coveralls from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: coveralls Handling codecov from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: codecov Handling asv from pyproject.toml generated metadata: [optional-dependencies] test (dipy) Ignoring alien requirement: asv Handling scikit_learn from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: scikit_learn Handling pandas from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: pandas Handling statsmodels>=0.14.0 from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: statsmodels>=0.14.0 Handling tables from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: tables Handling tensorflow from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: tensorflow Handling torch from pyproject.toml generated metadata: [optional-dependencies] ml (dipy) Ignoring alien requirement: torch Handling meson-python>=0.13 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: meson-python>=0.13 Handling wheel from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: wheel Handling setuptools~=69.5 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: setuptools~=69.5 Handling packaging>=21 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: packaging>=21 Handling ninja from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: ninja Handling Cython>=0.29.35 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: Cython>=0.29.35 Handling numpy>=1.22.4 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: numpy>=1.22.4 Handling spin>=0.5 from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: spin>=0.5 Handling build from pyproject.toml generated metadata: [optional-dependencies] dev (dipy) Ignoring alien requirement: build Handling dipy[viz, ml] from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: dipy[viz, ml] Handling cvxpy from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: cvxpy Handling scikit-image from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: scikit-image Handling boto3 from pyproject.toml generated metadata: [optional-dependencies] extra (dipy) Ignoring alien requirement: boto3 Handling numpydoc from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: numpydoc Handling sphinx>=7.2.6 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinx>=7.2.6 Handling texext from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: texext Handling tomli; python_version < "3.11" from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: tomli; python_version < "3.11" Handling sphinxcontrib-bibtex from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinxcontrib-bibtex Handling sphinx_design from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinx_design Handling sphinx-gallery>=0.10.0 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: sphinx-gallery>=0.10.0 Handling tomli>=2.0.1 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: tomli>=2.0.1 Handling grg-sphinx-theme>=0.4.0 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: grg-sphinx-theme>=0.4.0 Handling Jinja2 from pyproject.toml generated metadata: [optional-dependencies] doc (dipy) Ignoring alien requirement: Jinja2 + cat /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.yYoN7f + umask 022 + cd /builddir/build/BUILD/python-dipy-1.10.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd dipy-1.10.0 + mkdir -p /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/pyproject-wheeldir Processing /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) + meson setup /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0 /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5 -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --native-file=/builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/meson-python-native-file.ini The Meson build system Version: 1.5.1 Source dir: /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0 Build dir: /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5 Build type: native build Project name: dipy Project version: 1.10.0 C compiler for the host machine: gcc (gcc 14.2.1 "gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)") C linker for the host machine: gcc ld.bfd 2.43.50.20241126 C++ compiler for the host machine: g++ (gcc 14.2.1 "g++ (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)") C++ linker for the host machine: g++ ld.bfd 2.43.50.20241126 Cython compiler for the host machine: cython (cython 3.0.11) Host machine cpu family: s390x Host machine cpu: s390x Program python found: YES (/usr/bin/python3) Found pkg-config: YES (/usr/bin/pkg-config) 2.3.0 Run-time dependency python found: YES 3.13 Program cython found: YES (/usr/bin/cython) Library m found: YES Compiler for C supports arguments -Wno-maybe-uninitialized: YES Compiler for C supports arguments -Wno-discarded-qualifiers: YES Compiler for C supports arguments -Wno-empty-body: YES Compiler for C supports arguments -Wno-implicit-function-declaration: YES Compiler for C supports arguments -Wno-parentheses: YES Compiler for C supports arguments -Wno-switch: YES Compiler for C supports arguments -Wno-unused-label: YES Compiler for C supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-cpp: YES Compiler for C++ supports arguments -Wno-deprecated-declarations: YES Compiler for C++ supports arguments -Wno-class-memaccess: YES Compiler for C++ supports arguments -Wno-format-truncation: YES Compiler for C++ supports arguments -Wno-format-extra-args: YES Compiler for C++ supports arguments -Wno-format: NO Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-switch: YES Compiler for C++ supports arguments -Wno-terminate: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-function: YES Compiler for C++ supports arguments -Wno-unused-local-typedefs: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-int-in-bool-context: YES Run-time dependency OpenMP found: YES 4.5 Checking if "SSE intrinsics" compiles: NO Checking if "ARM NEON intrinsics" compiles: NO Build targets in project: 45 dipy 1.10.0 User defined options Native files: /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/meson-python-native-file.ini buildtype : release b_ndebug : if-release b_vscrt : md Found ninja-1.12.1 at /usr/bin/ninja Generating targets: 0%| | 0/45 eta ? Writing build.ninja: 0%| | 0/188 eta ? + /usr/bin/ninja [1/123] Copying file dipy/__init__.py [2/123] Copying file dipy/cythonutils.h [3/123] Copying file dipy/conditional_omp.h [4/123] Copying file dipy/dpy_math.h [5/123] Generating dipy/generate-version with a custom command [6/123] Copying file dipy/safe_openmp.pxd [7/123] Generating 'dipy/align/bundlemin.cpython-313-s390x-linux-gnu.so.p/bundlemin.c' [8/123] Generating 'dipy/align/expectmax.cpython-313-s390x-linux-gnu.so.p/expectmax.c' [9/123] Generating 'dipy/align/crosscorr.cpython-313-s390x-linux-gnu.so.p/crosscorr.c' [10/123] Generating 'dipy/align/parzenhist.cpython-313-s390x-linux-gnu.so.p/parzenhist.c' [11/123] Generating 'dipy/align/transforms.cpython-313-s390x-linux-gnu.so.p/transforms.c' [12/123] Generating 'dipy/align/sumsqdiff.cpython-313-s390x-linux-gnu.so.p/sumsqdiff.c' [13/123] Generating 'dipy/denoise/denspeed.cpython-313-s390x-linux-gnu.so.p/denspeed.c' [14/123] Generating 'dipy/core/interpolation.cpython-313-s390x-linux-gnu.so.p/interpolation.c' [15/123] Generating 'dipy/denoise/enhancement_kernel.cpython-313-s390x-linux-gnu.so.p/enhancement_kernel.c' [16/123] Generating 'dipy/denoise/nlmeans_block.cpython-313-s390x-linux-gnu.so.p/nlmeans_block.c' [17/123] Generating 'dipy/denoise/pca_noise_estimate.cpython-313-s390x-linux-gnu.so.p/pca_noise_estimate.c' [18/123] Generating 'dipy/align/vector_fields.cpython-313-s390x-linux-gnu.so.p/vector_fields.c' [19/123] Generating 'dipy/denoise/shift_twist_convolution.cpython-313-s390x-linux-gnu.so.p/shift_twist_convolution.c' [20/123] Generating 'dipy/direction/bootstrap_direction_getter.cpython-313-s390x-linux-gnu.so.p/bootstrap_direction_getter.c' [21/123] Generating 'dipy/direction/closest_peak_direction_getter.cpython-313-s390x-linux-gnu.so.p/closest_peak_direction_getter.c' [22/123] Generating 'dipy/direction/pmf.cpython-313-s390x-linux-gnu.so.p/pmf.c' [23/123] Generating 'dipy/direction/probabilistic_direction_getter.cpython-313-s390x-linux-gnu.so.p/probabilistic_direction_getter.c' [24/123] Generating 'dipy/direction/ptt_direction_getter.cpython-313-s390x-linux-gnu.so.p/ptt_direction_getter.c' [25/123] Generating 'dipy/reconst/eudx_direction_getter.cpython-313-s390x-linux-gnu.so.p/eudx_direction_getter.c' [26/123] Generating 'dipy/reconst/quick_squash.cpython-313-s390x-linux-gnu.so.p/quick_squash.c' [27/123] Generating 'dipy/reconst/recspeed.cpython-313-s390x-linux-gnu.so.p/recspeed.c' [28/123] Generating 'dipy/reconst/vec_val_sum.cpython-313-s390x-linux-gnu.so.p/vec_val_sum.c' [29/123] Generating 'dipy/segment/clustering_algorithms.cpython-313-s390x-linux-gnu.so.p/clustering_algorithms.c' [30/123] Generating 'dipy/segment/cythonutils.cpython-313-s390x-linux-gnu.so.p/cythonutils.c' [31/123] Generating 'dipy/segment/clusteringspeed.cpython-313-s390x-linux-gnu.so.p/clusteringspeed.c' [32/123] Generating 'dipy/segment/featurespeed.cpython-313-s390x-linux-gnu.so.p/featurespeed.c' [33/123] Generating 'dipy/segment/mrf.cpython-313-s390x-linux-gnu.so.p/mrf.c' [34/123] Generating 'dipy/segment/metricspeed.cpython-313-s390x-linux-gnu.so.p/metricspeed.c' [35/123] Generating 'dipy/tracking/direction_getter.cpython-313-s390x-linux-gnu.so.p/direction_getter.c' [36/123] Generating 'dipy/tracking/distances.cpython-313-s390x-linux-gnu.so.p/distances.c' [37/123] Generating 'dipy/tracking/fbcmeasures.cpython-313-s390x-linux-gnu.so.p/fbcmeasures.c' [38/123] Generating 'dipy/tracking/localtrack.cpython-313-s390x-linux-gnu.so.p/localtrack.c' [39/123] Generating 'dipy/tracking/propspeed.cpython-313-s390x-linux-gnu.so.p/propspeed.c' [40/123] Generating 'dipy/tracking/stopping_criterion.cpython-313-s390x-linux-gnu.so.p/stopping_criterion.c' [41/123] Generating 'dipy/tracking/streamlinespeed.cpython-313-s390x-linux-gnu.so.p/streamlinespeed.c' [42/123] Generating 'dipy/utils/fast_numpy.cpython-313-s390x-linux-gnu.so.p/fast_numpy.c' [43/123] Generating 'dipy/tracking/vox2track.cpython-313-s390x-linux-gnu.so.p/vox2track.c' [44/123] Generating 'dipy/utils/omp.cpython-313-s390x-linux-gnu.so.p/omp.c' [45/123] Generating 'dipy/utils/tests/test_fast_numpy.cpython-313-s390x-linux-gnu.so.p/test_fast_numpy.c' [46/123] Compiling C object dipy/align/bundlemin.cpython-313-s390x-linux-gnu.so.p/meson-generated_bundlemin.c.o [47/123] Compiling C object dipy/align/expectmax.cpython-313-s390x-linux-gnu.so.p/meson-generated_expectmax.c.o [48/123] Compiling C object dipy/align/crosscorr.cpython-313-s390x-linux-gnu.so.p/meson-generated_crosscorr.c.o [49/123] Compiling C object dipy/align/parzenhist.cpython-313-s390x-linux-gnu.so.p/meson-generated_parzenhist.c.o [50/123] Compiling C object dipy/align/transforms.cpython-313-s390x-linux-gnu.so.p/meson-generated_transforms.c.o [51/123] Compiling C object dipy/align/sumsqdiff.cpython-313-s390x-linux-gnu.so.p/meson-generated_sumsqdiff.c.o [52/123] Compiling C object dipy/denoise/denspeed.cpython-313-s390x-linux-gnu.so.p/meson-generated_denspeed.c.o [53/123] Compiling C object dipy/denoise/enhancement_kernel.cpython-313-s390x-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o [54/123] Compiling C object dipy/core/interpolation.cpython-313-s390x-linux-gnu.so.p/meson-generated_interpolation.c.o [55/123] Compiling C object dipy/denoise/nlmeans_block.cpython-313-s390x-linux-gnu.so.p/meson-generated_nlmeans_block.c.o [56/123] Compiling C object dipy/denoise/pca_noise_estimate.cpython-313-s390x-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o [57/123] Compiling C object dipy/denoise/shift_twist_convolution.cpython-313-s390x-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o [58/123] Compiling C object dipy/direction/bootstrap_direction_getter.cpython-313-s390x-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o [59/123] Compiling C object dipy/direction/closest_peak_direction_getter.cpython-313-s390x-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o [60/123] Compiling C object dipy/direction/pmf.cpython-313-s390x-linux-gnu.so.p/meson-generated_pmf.c.o [61/123] Compiling C object dipy/direction/probabilistic_direction_getter.cpython-313-s390x-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o [62/123] Compiling C object dipy/direction/ptt_direction_getter.cpython-313-s390x-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o [63/123] Compiling C object dipy/reconst/eudx_direction_getter.cpython-313-s390x-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o [64/123] Compiling C object dipy/reconst/quick_squash.cpython-313-s390x-linux-gnu.so.p/meson-generated_quick_squash.c.o [65/123] Compiling C object dipy/align/vector_fields.cpython-313-s390x-linux-gnu.so.p/meson-generated_vector_fields.c.o [66/123] Compiling C object dipy/reconst/vec_val_sum.cpython-313-s390x-linux-gnu.so.p/meson-generated_vec_val_sum.c.o [67/123] Compiling C object dipy/reconst/recspeed.cpython-313-s390x-linux-gnu.so.p/meson-generated_recspeed.c.o [68/123] Compiling C object dipy/segment/cythonutils.cpython-313-s390x-linux-gnu.so.p/meson-generated_cythonutils.c.o [69/123] Compiling C object dipy/segment/clustering_algorithms.cpython-313-s390x-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o [70/123] Compiling C object dipy/segment/clusteringspeed.cpython-313-s390x-linux-gnu.so.p/meson-generated_clusteringspeed.c.o [71/123] Compiling C object dipy/segment/featurespeed.cpython-313-s390x-linux-gnu.so.p/meson-generated_featurespeed.c.o [72/123] Compiling C object dipy/segment/metricspeed.cpython-313-s390x-linux-gnu.so.p/meson-generated_metricspeed.c.o [73/123] Compiling C object dipy/segment/mrf.cpython-313-s390x-linux-gnu.so.p/meson-generated_mrf.c.o [74/123] Compiling C object dipy/tracking/direction_getter.cpython-313-s390x-linux-gnu.so.p/meson-generated_direction_getter.c.o [75/123] Compiling C object dipy/tracking/fbcmeasures.cpython-313-s390x-linux-gnu.so.p/meson-generated_fbcmeasures.c.o [76/123] Compiling C object dipy/tracking/distances.cpython-313-s390x-linux-gnu.so.p/meson-generated_distances.c.o [77/123] Compiling C object dipy/tracking/localtrack.cpython-313-s390x-linux-gnu.so.p/meson-generated_localtrack.c.o [78/123] Compiling C object dipy/tracking/propspeed.cpython-313-s390x-linux-gnu.so.p/meson-generated_propspeed.c.o [79/123] Compiling C object dipy/tracking/streamlinespeed.cpython-313-s390x-linux-gnu.so.p/meson-generated_streamlinespeed.c.o [80/123] Compiling C object dipy/tracking/stopping_criterion.cpython-313-s390x-linux-gnu.so.p/meson-generated_stopping_criterion.c.o In file included from /usr/include/string.h:548, from /usr/include/python3.13/Python.h:39, from dipy/tracking/stopping_criterion.cpython-313-s390x-linux-gnu.so.p/stopping_criterion.c:16: In function ‘memcpy’, inlined from ‘__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state’ at dipy/tracking/stopping_criterion.cpython-313-s390x-linux-gnu.so.p/stopping_criterion.c:30345:3: /usr/include/bits/string_fortified.h:29:10: warning: ‘MEM [(char * {ref-all})&__pyx_t_1]’ may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ dipy/tracking/stopping_criterion.cpython-313-s390x-linux-gnu.so.p/stopping_criterion.c: In function ‘__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state’: dipy/tracking/stopping_criterion.cpython-313-s390x-linux-gnu.so.p/stopping_criterion.c:30319:10: note: ‘MEM [(char * {ref-all})&__pyx_t_1]’ was declared here 30319 | double __pyx_t_1[1]; | ^~~~~~~~~ [81/123] Compiling C object dipy/utils/fast_numpy.cpython-313-s390x-linux-gnu.so.p/meson-generated_fast_numpy.c.o dipy/utils/fast_numpy.cpython-313-s390x-linux-gnu.so.p/fast_numpy.c:5607:13: warning: ‘__pyx_f_4dipy_5utils_10fast_numpy_print_c_array_pointer’ defined but not used [-Wunused-function] 5607 | static void __pyx_f_4dipy_5utils_10fast_numpy_print_c_array_pointer(double *__pyx_v_arr, int __pyx_v_size) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [82/123] Compiling C object dipy/utils/omp.cpython-313-s390x-linux-gnu.so.p/meson-generated_omp.c.o [83/123] Compiling C object dipy/tracking/vox2track.cpython-313-s390x-linux-gnu.so.p/meson-generated_vox2track.c.o [84/123] Linking target dipy/align/bundlemin.cpython-313-s390x-linux-gnu.so [85/123] Compiling C object dipy/utils/tests/test_fast_numpy.cpython-313-s390x-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o [86/123] Linking target dipy/align/crosscorr.cpython-313-s390x-linux-gnu.so [87/123] Linking target dipy/align/expectmax.cpython-313-s390x-linux-gnu.so [88/123] Linking target dipy/align/parzenhist.cpython-313-s390x-linux-gnu.so [89/123] Linking target dipy/align/transforms.cpython-313-s390x-linux-gnu.so [90/123] Linking target dipy/align/sumsqdiff.cpython-313-s390x-linux-gnu.so [91/123] Linking target dipy/denoise/denspeed.cpython-313-s390x-linux-gnu.so [92/123] Linking target dipy/core/interpolation.cpython-313-s390x-linux-gnu.so [93/123] Linking target dipy/denoise/enhancement_kernel.cpython-313-s390x-linux-gnu.so [94/123] Linking target dipy/denoise/nlmeans_block.cpython-313-s390x-linux-gnu.so [95/123] Linking target dipy/denoise/pca_noise_estimate.cpython-313-s390x-linux-gnu.so [96/123] Linking target dipy/denoise/shift_twist_convolution.cpython-313-s390x-linux-gnu.so [97/123] Linking target dipy/direction/bootstrap_direction_getter.cpython-313-s390x-linux-gnu.so [98/123] Linking target dipy/direction/closest_peak_direction_getter.cpython-313-s390x-linux-gnu.so [99/123] Linking target dipy/direction/pmf.cpython-313-s390x-linux-gnu.so [100/123] Linking target dipy/direction/probabilistic_direction_getter.cpython-313-s390x-linux-gnu.so [101/123] Linking target dipy/direction/ptt_direction_getter.cpython-313-s390x-linux-gnu.so [102/123] Linking target dipy/reconst/eudx_direction_getter.cpython-313-s390x-linux-gnu.so [103/123] Linking target dipy/reconst/quick_squash.cpython-313-s390x-linux-gnu.so [104/123] Linking target dipy/align/vector_fields.cpython-313-s390x-linux-gnu.so [105/123] Linking target dipy/reconst/vec_val_sum.cpython-313-s390x-linux-gnu.so [106/123] Linking target dipy/reconst/recspeed.cpython-313-s390x-linux-gnu.so [107/123] Linking target dipy/segment/clustering_algorithms.cpython-313-s390x-linux-gnu.so [108/123] Linking target dipy/segment/cythonutils.cpython-313-s390x-linux-gnu.so [109/123] Linking target dipy/segment/clusteringspeed.cpython-313-s390x-linux-gnu.so [110/123] Linking target dipy/segment/featurespeed.cpython-313-s390x-linux-gnu.so [111/123] Linking target dipy/segment/metricspeed.cpython-313-s390x-linux-gnu.so [112/123] Linking target dipy/segment/mrf.cpython-313-s390x-linux-gnu.so [113/123] Linking target dipy/tracking/direction_getter.cpython-313-s390x-linux-gnu.so [114/123] Linking target dipy/tracking/localtrack.cpython-313-s390x-linux-gnu.so [115/123] Linking target dipy/tracking/distances.cpython-313-s390x-linux-gnu.so [116/123] Linking target dipy/tracking/fbcmeasures.cpython-313-s390x-linux-gnu.so [117/123] Linking target dipy/tracking/propspeed.cpython-313-s390x-linux-gnu.so [118/123] Linking target dipy/tracking/stopping_criterion.cpython-313-s390x-linux-gnu.so [119/123] Linking target dipy/tracking/streamlinespeed.cpython-313-s390x-linux-gnu.so [120/123] Linking target dipy/tracking/vox2track.cpython-313-s390x-linux-gnu.so [121/123] Linking target dipy/utils/fast_numpy.cpython-313-s390x-linux-gnu.so [122/123] Linking target dipy/utils/omp.cpython-313-s390x-linux-gnu.so [123/123] Linking target dipy/utils/tests/test_fast_numpy.cpython-313-s390x-linux-gnu.so [1/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/version.py [2/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/align/bundlemin.cpython-313-s390x-linux-gnu.so [3/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/align/crosscorr.cpython-313-s390x-linux-gnu.so [4/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/align/expectmax.cpython-313-s390x-linux-gnu.so [5/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/align/parzenhist.cpython-313-s390x-linux-gnu.so [6/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/align/sumsqdiff.cpython-313-s390x-linux-gnu.so [7/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/align/transforms.cpython-313-s390x-linux-gnu.so [8/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/align/vector_fields.cpython-313-s390x-linux-gnu.so [9/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/core/interpolation.cpython-313-s390x-linux-gnu.so [10/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/denoise/denspeed.cpython-313-s390x-linux-gnu.so [11/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/denoise/enhancement_kernel.cpython-313-s390x-linux-gnu.so [12/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/denoise/nlmeans_block.cpython-313-s390x-linux-gnu.so [13/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/denoise/pca_noise_estimate.cpython-313-s390x-linux-gnu.so [14/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/denoise/shift_twist_convolution.cpython-313-s390x-linux-gnu.so [15/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/direction/bootstrap_direction_getter.cpython-313-s390x-linux-gnu.so [16/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/direction/closest_peak_direction_getter.cpython-313-s390x-linux-gnu.so [17/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/direction/pmf.cpython-313-s390x-linux-gnu.so [18/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/direction/probabilistic_direction_getter.cpython-313-s390x-linux-gnu.so [19/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/direction/ptt_direction_getter.cpython-313-s390x-linux-gnu.so [20/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/reconst/eudx_direction_getter.cpython-313-s390x-linux-gnu.so [21/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/reconst/quick_squash.cpython-313-s390x-linux-gnu.so [22/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/reconst/recspeed.cpython-313-s390x-linux-gnu.so [23/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/reconst/vec_val_sum.cpython-313-s390x-linux-gnu.so [24/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/segment/clustering_algorithms.cpython-313-s390x-linux-gnu.so [25/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.mesonpy-god97bx5/dipy/segment/clusteringspeed.cpython-313-s390x-linux-gnu.so [26/545] 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/builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/tissue_classification.py [532/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/tracking_bootstrap_peaks.py [533/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/tracking_deterministic.py [534/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/tracking_introduction_eudx.py [535/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/tracking_pft.py [536/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/tracking_probabilistic.py [537/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/tracking_ptt.py [538/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/tracking_rumba.py [539/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/tracking_sfm.py [540/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/tracking_stopping_criterion.py [541/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/viz_advanced.py [542/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/viz_bundles.py [543/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/viz_roi_contour.py [544/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/viz_slice.py [545/545] /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/dipy/../doc/examples/workflow_creation.py Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: dipy Building wheel for dipy (pyproject.toml): started Running command Building wheel for dipy (pyproject.toml) Building wheel for dipy (pyproject.toml): finished with status 'done' Created wheel for dipy: filename=dipy-1.10.0-cp313-cp313-linux_s390x.whl size=31839279 sha256=dfef21233ca022b113ded86d0240a0dd156e3eb6c8ea2fc1e2e171eded899dc0 Stored in directory: /builddir/.cache/pip/wheels/7e/d6/9e/09ce82fc8017967f8cc8510fe60bb6e2a80a7b47af95042dd4 Successfully built dipy + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.YI7z06 + umask 022 + cd /builddir/build/BUILD/python-dipy-1.10.0-build + '[' /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-dipy-1.10.0-build + mkdir /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd dipy-1.10.0 ++ ls /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/pyproject-wheeldir/dipy-1.10.0-cp313-cp313-linux_s390x.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=dipy==1.10.0 + '[' -z dipy==1.10.0 ']' + TMPDIR=/builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/pyproject-wheeldir dipy==1.10.0 Using pip 24.3.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/pyproject-wheeldir Processing ./pyproject-wheeldir/dipy-1.10.0-cp313-cp313-linux_s390x.whl Installing collected packages: dipy Creating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_align_syn to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_align_affine to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_apply_transform to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_buan_shapes to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_buan_profiles to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_buan_lmm to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_bundlewarp to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_correct_motion to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_nlmeans to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_lpca to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_mppca to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_patch2self to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_evac_plus to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fetch to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_csa to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_csd to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_dki to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_dti to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_dsi to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_ivim to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_mapmri to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_mask to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_gibbs_ringing to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_horizon to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_info to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_labelsbundles to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_median_otsu to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_recobundles to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_reslice to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_sh_convert_mrtrix to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_snr_in_cc to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_split to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_track to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_track_pft to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_slr to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_concatenate_tractograms to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_convert_tractogram to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_convert_tensors to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_nifti2pam to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_pam2nifti to 755 changing mode of /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_tensor2pam to 755 Successfully installed dipy-1.10.0 + '[' -d /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_align_affine /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_align_syn /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_apply_transform /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_buan_lmm /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_buan_profiles /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_buan_shapes /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_bundlewarp /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_concatenate_tractograms /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_convert_tensors /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_convert_tractogram /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_correct_motion /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_lpca /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_mppca /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_nlmeans /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_patch2self /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_evac_plus /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fetch /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_csa /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_csd /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_dki /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_dsi /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_dti /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_ivim /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_mapmri /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_gibbs_ringing /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_horizon /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_info /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_labelsbundles /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_mask /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_median_otsu /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_nifti2pam /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_pam2nifti /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_recobundles /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_reslice /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_sh_convert_mrtrix /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_slr /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_snr_in_cc /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_split /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_tensor2pam /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_track /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_track_pft /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_align_affine: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_align_syn: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_apply_transform: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_buan_lmm: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_buan_profiles: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_buan_shapes: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_bundlewarp: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_concatenate_tractograms: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_convert_tensors: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_convert_tractogram: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_correct_motion: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_lpca: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_mppca: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_nlmeans: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_denoise_patch2self: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_evac_plus: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fetch: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_csa: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_csd: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_dki: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_dsi: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_dti: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_ivim: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_fit_mapmri: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_gibbs_ringing: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_horizon: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_info: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_labelsbundles: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_mask: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_median_otsu: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_nifti2pam: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_pam2nifti: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_recobundles: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_reslice: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_sh_convert_mrtrix: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_slr: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_snr_in_cc: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_split: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_tensor2pam: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_track: updating /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/dipy_track_pft: updating + rm -rfv /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + site_dirs+=("/usr/lib64/python3.13/site-packages") + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib64/python3.13/site-packages/dipy-1.10.0.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy-1.10.0.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT --record /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy-1.10.0.dist-info/RECORD --output /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-record + rm -fv /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy-1.10.0.dist-info/RECORD removed '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy-1.10.0.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy-1.10.0.dist-info/REQUESTED removed '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy-1.10.0.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-files --output-modules /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-modules --buildroot /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/python-dipy-1.10.0-build/python-dipy-1.10.0-4.fc42.s390x-pyproject-record --prefix /usr dipy + mkdir -p /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc + mv /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/doc/dipy/examples /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/ + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.10.0-4.fc42 --unique-debug-suffix -1.10.0-4.fc42.s390x --unique-debug-src-base python-dipy-1.10.0-4.fc42.s390x --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0 find-debuginfo: starting Extracting debug info from 39 files DWARF-compressing 39 files sepdebugcrcfix: Updated 39 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/python-dipy-1.10.0-4.fc42.s390x cpio: .mesonpy-god97bx5/: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/align/bundlemin.cpython-313-s390x-linux-gnu.so.p/bundlemin.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/align/crosscorr.cpython-313-s390x-linux-gnu.so.p/crosscorr.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/align/expectmax.cpython-313-s390x-linux-gnu.so.p/expectmax.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/align/parzenhist.cpython-313-s390x-linux-gnu.so.p/parzenhist.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/align/sumsqdiff.cpython-313-s390x-linux-gnu.so.p/sumsqdiff.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/align/transforms.cpython-313-s390x-linux-gnu.so.p/transforms.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/align/vector_fields.cpython-313-s390x-linux-gnu.so.p/vector_fields.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/core/interpolation.cpython-313-s390x-linux-gnu.so.p/interpolation.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/denoise/denspeed.cpython-313-s390x-linux-gnu.so.p/denspeed.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/denoise/enhancement_kernel.cpython-313-s390x-linux-gnu.so.p/enhancement_kernel.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/denoise/nlmeans_block.cpython-313-s390x-linux-gnu.so.p/nlmeans_block.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/denoise/pca_noise_estimate.cpython-313-s390x-linux-gnu.so.p/pca_noise_estimate.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/denoise/shift_twist_convolution.cpython-313-s390x-linux-gnu.so.p/shift_twist_convolution.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/direction/bootstrap_direction_getter.cpython-313-s390x-linux-gnu.so.p/bootstrap_direction_getter.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/direction/closest_peak_direction_getter.cpython-313-s390x-linux-gnu.so.p/closest_peak_direction_getter.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/direction/pmf.cpython-313-s390x-linux-gnu.so.p/pmf.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/direction/probabilistic_direction_getter.cpython-313-s390x-linux-gnu.so.p/probabilistic_direction_getter.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/direction/ptt_direction_getter.cpython-313-s390x-linux-gnu.so.p/ptt_direction_getter.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/dpy_math.h: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/reconst/eudx_direction_getter.cpython-313-s390x-linux-gnu.so.p/eudx_direction_getter.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/reconst/quick_squash.cpython-313-s390x-linux-gnu.so.p/quick_squash.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/reconst/recspeed.cpython-313-s390x-linux-gnu.so.p/recspeed.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/reconst/vec_val_sum.cpython-313-s390x-linux-gnu.so.p/vec_val_sum.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/segment/clustering_algorithms.cpython-313-s390x-linux-gnu.so.p/clustering_algorithms.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/segment/clusteringspeed.cpython-313-s390x-linux-gnu.so.p/clusteringspeed.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/segment/cythonutils.cpython-313-s390x-linux-gnu.so.p/cythonutils.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/segment/featurespeed.cpython-313-s390x-linux-gnu.so.p/featurespeed.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/segment/metricspeed.cpython-313-s390x-linux-gnu.so.p/metricspeed.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/segment/mrf.cpython-313-s390x-linux-gnu.so.p/mrf.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/tracking/direction_getter.cpython-313-s390x-linux-gnu.so.p/direction_getter.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/tracking/distances.cpython-313-s390x-linux-gnu.so.p/distances.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/tracking/fbcmeasures.cpython-313-s390x-linux-gnu.so.p/fbcmeasures.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/tracking/localtrack.cpython-313-s390x-linux-gnu.so.p/localtrack.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/tracking/propspeed.cpython-313-s390x-linux-gnu.so.p/propspeed.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/tracking/stopping_criterion.cpython-313-s390x-linux-gnu.so.p/stopping_criterion.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/tracking/streamlinespeed.cpython-313-s390x-linux-gnu.so.p/streamlinespeed.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/tracking/vox2track.cpython-313-s390x-linux-gnu.so.p/vox2track.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/utils/fast_numpy.cpython-313-s390x-linux-gnu.so.p/fast_numpy.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/utils/omp.cpython-313-s390x-linux-gnu.so.p/omp.c: Cannot stat: No such file or directory cpio: .mesonpy-god97bx5/dipy/utils/tests/test_fast_numpy.cpython-313-s390x-linux-gnu.so.p/test_fast_numpy.c: Cannot stat: No such file or directory find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/lib64/python3.13/site-packages/dipy/align/streamwarp.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/dipy/align/tests/test_streamwarp.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/dipy/reconst/shm.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/dipy/workflows/stats.py is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below 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/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/reconst_dsid.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/reconst_dti.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/reconst_forecast.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/reconst_fwdti.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/reconst_gqi.cpython-313.pyc: failed to process: pyc file 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/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/reconst_qtdmri.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/reconst_qti.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/reconst_qtiplus.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/reconst_rumba.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/reconst_sfm.cpython-313.pyc: failed to process: pyc file 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to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/viz_advanced.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/viz_bundles.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/viz_roi_contour.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/viz_slice.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/share/doc/python-dipy-doc/examples/__pycache__/workflow_creation.cpython-313.pyc: failed to process: pyc file with hash invalidation are not supported /builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/__pycache__/conftest.cpython-313.pyc: rewriting with normalized contents Scanned 115 directories and 1417 files, processed 473 inodes, 385 modified (72 replaced + 313 rewritten), 88 unsupported format, 0 errors Reading /builddir/build/BUILD/python-dipy-1.10.0-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.lAhvfg + umask 022 + cd /builddir/build/BUILD/python-dipy-1.10.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd dipy-1.10.0 + k='not test_peaksFromModelParallel' + k='not test_peaksFromModelParallel and not test_reconst_csa' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking and not test_io_fetch' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking and not test_io_fetch and not test_concatenate' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking and not test_io_fetch and not test_concatenate and not test_io_info' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking and not test_io_fetch and not test_concatenate and not test_io_info and not test_concatenate_flow' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking and not test_io_fetch and not test_concatenate and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking and not test_io_fetch and not test_concatenate and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow and not test_shore_fitting_no_constrain_e0' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking and not test_io_fetch and not test_concatenate and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow and not test_shore_fitting_no_constrain_e0 and not test_bundlewarp' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking and not test_io_fetch and not test_concatenate and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow and not test_shore_fitting_no_constrain_e0 and not test_bundlewarp and not test_bundlewarp_vector_filed' + k='not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking and not test_io_fetch and not test_concatenate and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow and not test_shore_fitting_no_constrain_e0 and not test_bundlewarp and not test_bundlewarp_vector_filed and not test_bundle_shape_profile' + mkdir test ~/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/test ~/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0 + pushd test + ln -s ../pyproject.toml . + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=2 + /usr/bin/pytest -c pyproject.toml -v --pyargs dipy --ignore=dipy/io/tests/test_stateful_tractogram.py --ignore=dipy/io/tests/test_streamline.py --ignore=dipy/io/tests/test_utils.py '-k not test_peaksFromModelParallel and not test_reconst_csa and not test_reconst_rumba and not test_syn_registration and not test_register_dwi_to_template and not test_affine_registration and not test_single_transforms and not test_register_series and not test_register_dwi_series_and_motion_correction and not test_streamline_registration and not test_register_dwi_series_multi_b0 and not test_ptt_tracking and not test_io_fetch and not test_concatenate and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow and not test_shore_fitting_no_constrain_e0 and not test_bundlewarp and not test_bundlewarp_vector_filed and not test_bundle_shape_profile' ============================= test session starts ============================== platform linux -- Python 3.13.1, pytest-8.3.4, pluggy-1.5.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/python-dipy-1.10.0-build/dipy-1.10.0/test configfile: pyproject.toml collecting ... collected 126 items / 127 errors ==================================== ERRORS ==================================== ___________________ ERROR collecting align/tests/test_api.py ___________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_api.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting align/tests/test_crosscorr.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_crosscorr.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting align/tests/test_expectmax.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_expectmax.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting align/tests/test_imaffine.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_imaffine.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting align/tests/test_imwarp.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_imwarp.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting align/tests/test_metrics.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_metrics.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _______________ ERROR collecting align/tests/test_parzenhist.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_parzenhist.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting align/tests/test_reslice.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_reslice.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _______________ ERROR collecting align/tests/test_scalespace.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_scalespace.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting align/tests/test_streamlinear.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_streamlinear.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _______________ ERROR collecting align/tests/test_streamwarp.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_streamwarp.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting align/tests/test_sumsqdiff.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_sumsqdiff.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _______________ ERROR collecting align/tests/test_transforms.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_transforms.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting align/tests/test_vector_fields.py ______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_vector_fields.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _____________ ERROR collecting align/tests/test_whole_brain_slr.py _____________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/tests/test_whole_brain_slr.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting core/tests/test_gradients.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_gradients.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_gradients.py:8: in from dipy.core.gradients import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_gradients.py", line 8, in from dipy.core.gradients import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting core/tests/test_interpolation.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_interpolation.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_interpolation.py:5: in from scipy.ndimage import map_coordinates /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_interpolation.py", line 5, in from scipy.ndimage import map_coordinates File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting core/tests/test_optimize.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_optimize.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_optimize.py:3: in import scipy.sparse as sps /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_optimize.py", line 3, in import scipy.sparse as sps File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ___________________ ERROR collecting core/tests/test_rng.py ____________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_rng.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_rng.py:4: in from scipy.stats import chisquare /usr/lib64/python3.13/site-packages/scipy/stats/__init__.py:610: in from ._stats_py import * /usr/lib64/python3.13/site-packages/scipy/stats/_stats_py.py:37: in from scipy import sparse /usr/lib64/python3.13/site-packages/scipy/__init__.py:134: in __getattr__ return _importlib.import_module(f'scipy.{name}') /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_rng.py", line 4, in from scipy.stats import chisquare File "/usr/lib64/python3.13/site-packages/scipy/stats/__init__.py", line 610, in from ._stats_py import * File "/usr/lib64/python3.13/site-packages/scipy/stats/_stats_py.py", line 37, in from scipy import sparse File "/usr/lib64/python3.13/site-packages/scipy/__init__.py", line 134, in __getattr__ return _importlib.import_module(f'scipy.{name}') File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting core/tests/test_sphere.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_sphere.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_sphere.py:8: in from dipy.core.sphere import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py:4: in from scipy import optimize /usr/lib64/python3.13/site-packages/scipy/__init__.py:134: in __getattr__ return _importlib.import_module(f'scipy.{name}') /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py:414: in from ._optimize import * /usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py:35: in from scipy.linalg import cholesky, issymmetric, LinAlgError /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_sphere.py", line 8, in from dipy.core.sphere import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py", line 4, in from scipy import optimize File "/usr/lib64/python3.13/site-packages/scipy/__init__.py", line 134, in __getattr__ return _importlib.import_module(f'scipy.{name}') File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py", line 414, in from ._optimize import * File "/usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py", line 35, in from scipy.linalg import cholesky, issymmetric, LinAlgError File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ___________ ERROR collecting core/tests/test_subdivide_octahedron.py ___________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_subdivide_octahedron.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_subdivide_octahedron.py:3: in from dipy.core.subdivide_octahedron import create_unit_sphere ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/subdivide_octahedron.py:14: in from dipy.core.sphere import HemiSphere, unit_octahedron ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py:4: in from scipy import optimize /usr/lib64/python3.13/site-packages/scipy/__init__.py:134: in __getattr__ return _importlib.import_module(f'scipy.{name}') /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py:414: in from ._optimize import * /usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py:35: in from scipy.linalg import cholesky, issymmetric, LinAlgError /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/tests/test_subdivide_octahedron.py", line 3, in from dipy.core.subdivide_octahedron import create_unit_sphere File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/subdivide_octahedron.py", line 14, in from dipy.core.sphere import HemiSphere, unit_octahedron File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py", line 4, in from scipy import optimize File "/usr/lib64/python3.13/site-packages/scipy/__init__.py", line 134, in __getattr__ return _importlib.import_module(f'scipy.{name}') File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py", line 414, in from ._optimize import * File "/usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py", line 35, in from scipy.linalg import cholesky, issymmetric, LinAlgError File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ___________________ ERROR collecting data/tests/test_data.py ___________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/tests/test_data.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting data/tests/test_fetcher.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/tests/test_fetcher.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting denoise/tests/test_ascm.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_ascm.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_ascm.py:5: in import dipy.data as dpd ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_ascm.py", line 5, in import dipy.data as dpd File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting denoise/tests/test_denoise.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_denoise.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_denoise.py:1: in import dipy.data as dpd ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_denoise.py", line 1, in import dipy.data as dpd File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting denoise/tests/test_gibbs.py _________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_gibbs.py:4: in from dipy.denoise.gibbs import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/gibbs.py:5: in import scipy.fft /usr/lib64/python3.13/site-packages/scipy/fft/__init__.py:91: in from ._fftlog import fht, ifht, fhtoffset /usr/lib64/python3.13/site-packages/scipy/fft/_fftlog.py:10: in from ._fftlog_backend import fhtoffset /usr/lib64/python3.13/site-packages/scipy/fft/_fftlog_backend.py:4: in from ..special import loggamma, poch /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ________________ ERROR collecting denoise/tests/test_kernel.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_kernel.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_kernel.py:6: in from dipy.core.sphere import Sphere ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py:4: in from scipy import optimize /usr/lib64/python3.13/site-packages/scipy/__init__.py:134: in __getattr__ return _importlib.import_module(f'scipy.{name}') /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py:414: in from ._optimize import * /usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py:35: in from scipy.linalg import cholesky, issymmetric, LinAlgError /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_kernel.py", line 6, in from dipy.core.sphere import Sphere File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py", line 4, in from scipy import optimize File "/usr/lib64/python3.13/site-packages/scipy/__init__.py", line 134, in __getattr__ return _importlib.import_module(f'scipy.{name}') File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py", line 414, in from ._optimize import * File "/usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py", line 35, in from scipy.linalg import cholesky, issymmetric, LinAlgError File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting denoise/tests/test_lpca.py __________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_lpca.py:11: in import scipy.special as sps /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ____________ ERROR collecting denoise/tests/test_noise_estimate.py _____________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_noise_estimate.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_noise_estimate.py:10: in import dipy.core.gradients as dpg ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_noise_estimate.py", line 10, in import dipy.core.gradients as dpg File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting denoise/tests/test_patch2self.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_patch2self.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_patch2self.py:7: in from dipy.core.gradients import generate_bvecs, gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/denoise/tests/test_patch2self.py", line 7, in from dipy.core.gradients import generate_bvecs, gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _____ ERROR collecting direction/tests/test_bootstrap_direction_getter.py ______ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/direction/__init__.py:1: in from .bootstrap_direction_getter import BootDirectionGetter bootstrap_direction_getter.pyx:1: in init dipy.direction.bootstrap_direction_getter ??? direction_getter.pyx:1: in init dipy.tracking.direction_getter ??? stopping_criterion.pyx:1: in init dipy.tracking.stopping_criterion ??? interpolation.pyx:11: in init dipy.core.interpolation ??? /usr/lib64/python3.13/site-packages/scipy/interpolate/__init__.py:167: in from ._interpolate import * /usr/lib64/python3.13/site-packages/scipy/interpolate/_interpolate.py:8: in import scipy.special as spec /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ________________ ERROR collecting direction/tests/test_peaks.py ________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/direction/__init__.py:1: in from .bootstrap_direction_getter import BootDirectionGetter bootstrap_direction_getter.pyx:1: in init dipy.direction.bootstrap_direction_getter ??? direction_getter.pyx:1: in init dipy.tracking.direction_getter ??? stopping_criterion.pyx:1: in init dipy.tracking.stopping_criterion ??? interpolation.pyx:11: in init dipy.core.interpolation ??? /usr/lib64/python3.13/site-packages/scipy/interpolate/__init__.py:167: in from ._interpolate import * /usr/lib64/python3.13/site-packages/scipy/interpolate/_interpolate.py:8: in import scipy.special as spec /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _________________ ERROR collecting direction/tests/test_pmf.py _________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/direction/__init__.py:1: in from .bootstrap_direction_getter import BootDirectionGetter bootstrap_direction_getter.pyx:1: in init dipy.direction.bootstrap_direction_getter ??? direction_getter.pyx:1: in init dipy.tracking.direction_getter ??? stopping_criterion.pyx:1: in init dipy.tracking.stopping_criterion ??? interpolation.pyx:11: in init dipy.core.interpolation ??? /usr/lib64/python3.13/site-packages/scipy/interpolate/__init__.py:167: in from ._interpolate import * /usr/lib64/python3.13/site-packages/scipy/interpolate/_interpolate.py:8: in import scipy.special as spec /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ________ ERROR collecting direction/tests/test_prob_direction_getter.py ________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/direction/__init__.py:1: in from .bootstrap_direction_getter import BootDirectionGetter bootstrap_direction_getter.pyx:1: in init dipy.direction.bootstrap_direction_getter ??? direction_getter.pyx:1: in init dipy.tracking.direction_getter ??? stopping_criterion.pyx:1: in init dipy.tracking.stopping_criterion ??? interpolation.pyx:11: in init dipy.core.interpolation ??? /usr/lib64/python3.13/site-packages/scipy/interpolate/__init__.py:167: in from ._interpolate import * /usr/lib64/python3.13/site-packages/scipy/interpolate/_interpolate.py:8: in import scipy.special as spec /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ________ ERROR collecting direction/tests/test_ptt_direction_getter.py _________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/direction/__init__.py:1: in from .bootstrap_direction_getter import BootDirectionGetter bootstrap_direction_getter.pyx:1: in init dipy.direction.bootstrap_direction_getter ??? direction_getter.pyx:1: in init dipy.tracking.direction_getter ??? stopping_criterion.pyx:1: in init dipy.tracking.stopping_criterion ??? interpolation.pyx:11: in init dipy.core.interpolation ??? /usr/lib64/python3.13/site-packages/scipy/interpolate/__init__.py:167: in from ._interpolate import * /usr/lib64/python3.13/site-packages/scipy/interpolate/_interpolate.py:8: in import scipy.special as spec /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ____________________ ERROR collecting io/tests/test_dpy.py _____________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _____________________ ERROR collecting io/tests/test_io.py _____________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ________________ ERROR collecting io/tests/test_io_gradients.py ________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject __________________ ERROR collecting io/tests/test_io_peaks.py __________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ____________ ERROR collecting io/tests/test_stateful_tractogram.py _____________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _________________ ERROR collecting io/tests/test_streamline.py _________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ___________________ ERROR collecting io/tests/test_utils.py ____________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _______________ ERROR collecting nn/tests/test_cnn_1denoiser.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/tests/test_cnn_1denoiser.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:79: in __all__ = _load_backend() ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:20: in _load_backend import dipy.nn.torch.evac as evac_module ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py:10: in from dipy.align.reslice import reslice ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 79, in __all__ = _load_backend() File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 20, in _load_backend import dipy.nn.torch.evac as evac_module File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py", line 10, in from dipy.align.reslice import reslice File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ___________________ ERROR collecting nn/tests/test_deepn4.py ___________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/tests/test_deepn4.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:79: in __all__ = _load_backend() ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:20: in _load_backend import dipy.nn.torch.evac as evac_module ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py:10: in from dipy.align.reslice import reslice ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 79, in __all__ = _load_backend() File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 20, in _load_backend import dipy.nn.torch.evac as evac_module File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py", line 10, in from dipy.align.reslice import reslice File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ____________________ ERROR collecting nn/tests/test_evac.py ____________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/tests/test_evac.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:79: in __all__ = _load_backend() ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:20: in _load_backend import dipy.nn.torch.evac as evac_module ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py:10: in from dipy.align.reslice import reslice ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 79, in __all__ = _load_backend() File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 20, in _load_backend import dipy.nn.torch.evac as evac_module File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py", line 10, in from dipy.align.reslice import reslice File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting nn/tests/test_histo_resdnn.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/tests/test_histo_resdnn.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:79: in __all__ = _load_backend() ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:20: in _load_backend import dipy.nn.torch.evac as evac_module ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py:10: in from dipy.align.reslice import reslice ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 79, in __all__ = _load_backend() File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 20, in _load_backend import dipy.nn.torch.evac as evac_module File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py", line 10, in from dipy.align.reslice import reslice File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ___________________ ERROR collecting nn/tests/test_synb0.py ____________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/tests/test_synb0.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:79: in __all__ = _load_backend() ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:20: in _load_backend import dipy.nn.torch.evac as evac_module ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py:10: in from dipy.align.reslice import reslice ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 79, in __all__ = _load_backend() File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 20, in _load_backend import dipy.nn.torch.evac as evac_module File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py", line 10, in from dipy.align.reslice import reslice File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _____________________ ERROR collecting nn/tests/test_tf.py _____________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/tests/test_tf.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:79: in __all__ = _load_backend() ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:20: in _load_backend import dipy.nn.torch.evac as evac_module ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py:10: in from dipy.align.reslice import reslice ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 79, in __all__ = _load_backend() File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 20, in _load_backend import dipy.nn.torch.evac as evac_module File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py", line 10, in from dipy.align.reslice import reslice File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ___________________ ERROR collecting nn/tests/test_utils.py ____________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/tests/test_utils.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:79: in __all__ = _load_backend() ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py:20: in _load_backend import dipy.nn.torch.evac as evac_module ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py:10: in from dipy.align.reslice import reslice ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 79, in __all__ = _load_backend() File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/__init__.py", line 20, in _load_backend import dipy.nn.torch.evac as evac_module File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/nn/torch/evac.py", line 10, in from dipy.align.reslice import reslice File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting reconst/tests/test_bingham.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_bingham.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_bingham.py:8: in from dipy.data import get_sphere ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_bingham.py", line 8, in from dipy.data import get_sphere File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting reconst/tests/test_cache.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_cache.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_cache.py:3: in from dipy.core.sphere import Sphere ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py:4: in from scipy import optimize /usr/lib64/python3.13/site-packages/scipy/__init__.py:134: in __getattr__ return _importlib.import_module(f'scipy.{name}') /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py:414: in from ._optimize import * /usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py:35: in from scipy.linalg import cholesky, issymmetric, LinAlgError /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_cache.py", line 3, in from dipy.core.sphere import Sphere File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py", line 4, in from scipy import optimize File "/usr/lib64/python3.13/site-packages/scipy/__init__.py", line 134, in __getattr__ return _importlib.import_module(f'scipy.{name}') File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py", line 414, in from ._optimize import * File "/usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py", line 35, in from scipy.linalg import cholesky, issymmetric, LinAlgError File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ___________ ERROR collecting reconst/tests/test_cross_validation.py ____________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_cross_validation.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_cross_validation.py:8: in import dipy.core.gradients as gt ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_cross_validation.py", line 8, in import dipy.core.gradients as gt File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _______________ ERROR collecting reconst/tests/test_csdeconv.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_csdeconv.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_csdeconv.py:13: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_csdeconv.py", line 13, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting reconst/tests/test_cti.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_cti.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_cti.py:6: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_cti.py", line 6, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting reconst/tests/test_dki.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dki.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dki.py:15: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dki.py", line 15, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _______________ ERROR collecting reconst/tests/test_dki_micro.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dki_micro.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dki_micro.py:15: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dki_micro.py", line 15, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting reconst/tests/test_dsi.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dsi.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dsi.py:4: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dsi.py", line 4, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting reconst/tests/test_dsi_deconv.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dsi_deconv.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dsi_deconv.py:4: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dsi_deconv.py", line 4, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting reconst/tests/test_dsi_metrics.py ______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dsi_metrics.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dsi_metrics.py:4: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dsi_metrics.py", line 4, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting reconst/tests/test_dti.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dti.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dti.py:6: in import dipy.core.gradients as grad ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_dti.py", line 6, in import dipy.core.gradients as grad File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting reconst/tests/test_eudx_dg.py ________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_eudx_dg.py:6: in from dipy.direction.peaks import default_sphere, peaks_from_model ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/direction/__init__.py:1: in from .bootstrap_direction_getter import BootDirectionGetter bootstrap_direction_getter.pyx:1: in init dipy.direction.bootstrap_direction_getter ??? direction_getter.pyx:1: in init dipy.tracking.direction_getter ??? stopping_criterion.pyx:1: in init dipy.tracking.stopping_criterion ??? interpolation.pyx:11: in init dipy.core.interpolation ??? /usr/lib64/python3.13/site-packages/scipy/interpolate/__init__.py:167: in from ._interpolate import * /usr/lib64/python3.13/site-packages/scipy/interpolate/_interpolate.py:8: in import scipy.special as spec /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _______________ ERROR collecting reconst/tests/test_forecast.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_forecast.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_forecast.py:10: in from dipy.data import default_sphere, get_3shell_gtab, get_sphere ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_forecast.py", line 10, in from dipy.data import default_sphere, get_3shell_gtab, get_sphere File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting reconst/tests/test_fwdti.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_fwdti.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_fwdti.py:6: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_fwdti.py", line 6, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting reconst/tests/test_gqi.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_gqi.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_gqi.py:4: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_gqi.py", line 4, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting reconst/tests/test_ivim.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_ivim.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_ivim.py:26: in from dipy.core.gradients import generate_bvecs, gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_ivim.py", line 26, in from dipy.core.gradients import generate_bvecs, gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting reconst/tests/test_mapmri.py _________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_mapmri.py:15: in import scipy.integrate as integrate /usr/lib64/python3.13/site-packages/scipy/integrate/__init__.py:94: in from ._quadrature import * /usr/lib64/python3.13/site-packages/scipy/integrate/_quadrature.py:9: in from scipy.special import roots_legendre /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _________________ ERROR collecting reconst/tests/test_mcsd.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_mcsd.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_mcsd.py:7: in from dipy.core.gradients import GradientTable ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_mcsd.py", line 7, in from dipy.core.gradients import GradientTable File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting reconst/tests/test_msdki.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_msdki.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_msdki.py:13: in from dipy.core.gradients import gradient_table, round_bvals, unique_bvals_magnitude ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_msdki.py", line 13, in from dipy.core.gradients import gradient_table, round_bvals, unique_bvals_magnitude File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting reconst/tests/test_multi_voxel.py ______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_multi_voxel.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_multi_voxel.py:6: in from dipy.core.sphere import unit_icosahedron ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py:4: in from scipy import optimize /usr/lib64/python3.13/site-packages/scipy/__init__.py:134: in __getattr__ return _importlib.import_module(f'scipy.{name}') /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py:414: in from ._optimize import * /usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py:35: in from scipy.linalg import cholesky, issymmetric, LinAlgError /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_multi_voxel.py", line 6, in from dipy.core.sphere import unit_icosahedron File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py", line 4, in from scipy import optimize File "/usr/lib64/python3.13/site-packages/scipy/__init__.py", line 134, in __getattr__ return _importlib.import_module(f'scipy.{name}') File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py", line 414, in from ._optimize import * File "/usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py", line 35, in from scipy.linalg import cholesky, issymmetric, LinAlgError File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting reconst/tests/test_odf.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_odf.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_odf.py:4: in from dipy.core.gradients import GradientTable, gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_odf.py", line 4, in from dipy.core.gradients import GradientTable, gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _____________ ERROR collecting reconst/tests/test_peak_finding.py ______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_peak_finding.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_peak_finding.py:4: in from dipy.core.sphere import HemiSphere, unique_edges ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py:4: in from scipy import optimize /usr/lib64/python3.13/site-packages/scipy/__init__.py:134: in __getattr__ return _importlib.import_module(f'scipy.{name}') /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py:414: in from ._optimize import * /usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py:35: in from scipy.linalg import cholesky, issymmetric, LinAlgError /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_peak_finding.py", line 4, in from dipy.core.sphere import HemiSphere, unique_edges File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py", line 4, in from scipy import optimize File "/usr/lib64/python3.13/site-packages/scipy/__init__.py", line 134, in __getattr__ return _importlib.import_module(f'scipy.{name}') File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py", line 414, in from ._optimize import * File "/usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py", line 35, in from scipy.linalg import cholesky, issymmetric, LinAlgError File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting reconst/tests/test_qtdmri.py _________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_qtdmri.py:12: in import scipy.integrate as integrate /usr/lib64/python3.13/site-packages/scipy/integrate/__init__.py:94: in from ._quadrature import * /usr/lib64/python3.13/site-packages/scipy/integrate/_quadrature.py:9: in from scipy.special import roots_legendre /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject __________________ ERROR collecting reconst/tests/test_qti.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_qti.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_qti.py:6: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_qti.py", line 6, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting reconst/tests/test_rumba.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_rumba.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_rumba.py:14: in from dipy.core.gradients import gradient_table, unique_bvals_tolerance ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_rumba.py", line 14, in from dipy.core.gradients import gradient_table, unique_bvals_tolerance File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting reconst/tests/test_sfm.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_sfm.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_sfm.py:7: in import dipy.core.gradients as grad ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_sfm.py", line 7, in import dipy.core.gradients as grad File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting reconst/tests/test_shm.py __________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_shm.py:14: in from scipy.special import sph_harm as sph_harm_sp /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _________________ ERROR collecting reconst/tests/test_shore.py _________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_shore.py:8: in from scipy.special import gamma, genlaguerre /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _____________ ERROR collecting reconst/tests/test_shore_metrics.py _____________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_shore_metrics.py:5: in from scipy.special import genlaguerre /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _______________ ERROR collecting reconst/tests/test_shore_odf.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_shore_odf.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_shore_odf.py:7: in from dipy.core.subdivide_octahedron import create_unit_sphere ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/subdivide_octahedron.py:14: in from dipy.core.sphere import HemiSphere, unit_octahedron ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py:4: in from scipy import optimize /usr/lib64/python3.13/site-packages/scipy/__init__.py:134: in __getattr__ return _importlib.import_module(f'scipy.{name}') /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py:414: in from ._optimize import * /usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py:35: in from scipy.linalg import cholesky, issymmetric, LinAlgError /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_shore_odf.py", line 7, in from dipy.core.subdivide_octahedron import create_unit_sphere File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/subdivide_octahedron.py", line 14, in from dipy.core.sphere import HemiSphere, unit_octahedron File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py", line 4, in from scipy import optimize File "/usr/lib64/python3.13/site-packages/scipy/__init__.py", line 134, in __getattr__ return _importlib.import_module(f'scipy.{name}') File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py", line 414, in from ._optimize import * File "/usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py", line 35, in from scipy.linalg import cholesky, issymmetric, LinAlgError File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ____________ ERROR collecting reconst/tests/test_weights_method.py _____________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_weights_method.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_weights_method.py:10: in import dipy.core.gradients as grad ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/reconst/tests/test_weights_method.py", line 10, in import dipy.core.gradients as grad File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting segment/tests/test_bundles.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_bundles.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_bundles.py:6: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_bundles.py", line 6, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting segment/tests/test_clustering.py _______________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_clustering.py:7: in from dipy.segment.clustering import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/clustering.py:15: in from dipy.tracking.streamline import nbytes, set_number_of_points ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/streamline.py:8: in from scipy.spatial.distance import cdist /usr/lib64/python3.13/site-packages/scipy/spatial/__init__.py:110: in from ._kdtree import * /usr/lib64/python3.13/site-packages/scipy/spatial/_kdtree.py:4: in from ._ckdtree import cKDTree, cKDTreeNode _ckdtree.pyx:1: in init scipy.spatial._ckdtree ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject __________________ ERROR collecting segment/tests/test_fss.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_fss.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_fss.py:4: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_fss.py", line 4, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting segment/tests/test_mask.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_mask.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_mask.py:5: in from scipy.ndimage import binary_dilation, generate_binary_structure, median_filter /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_mask.py", line 5, in from scipy.ndimage import binary_dilation, generate_binary_structure, median_filter File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting segment/tests/test_mrf.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_mrf.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_mrf.py:4: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_mrf.py", line 4, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting segment/tests/test_qbx.py __________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_qbx.py:6: in from dipy.segment.clustering import QuickBundles, QuickBundlesX, qbx_and_merge ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/clustering.py:15: in from dipy.tracking.streamline import nbytes, set_number_of_points ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/streamline.py:8: in from scipy.spatial.distance import cdist /usr/lib64/python3.13/site-packages/scipy/spatial/__init__.py:110: in from ._kdtree import * /usr/lib64/python3.13/site-packages/scipy/spatial/_kdtree.py:4: in from ._ckdtree import cKDTree, cKDTreeNode _ckdtree.pyx:1: in init scipy.spatial._ckdtree ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _____________ ERROR collecting segment/tests/test_quickbundles.py ______________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_quickbundles.py:6: in from dipy.segment.clustering import QuickBundles ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/clustering.py:15: in from dipy.tracking.streamline import nbytes, set_number_of_points ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/streamline.py:8: in from scipy.spatial.distance import cdist /usr/lib64/python3.13/site-packages/scipy/spatial/__init__.py:110: in from ._kdtree import * /usr/lib64/python3.13/site-packages/scipy/spatial/_kdtree.py:4: in from ._ckdtree import cKDTree, cKDTreeNode _ckdtree.pyx:1: in init scipy.spatial._ckdtree ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ________________ ERROR collecting segment/tests/test_tissue.py _________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_tissue.py:5: in from dipy.segment.tissue import compute_directional_average, dam_classifier ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tissue.py:4: in from dipy.sims.voxel import add_noise ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/sims/voxel.py:3: in from scipy.special import jn /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _________________ ERROR collecting segment/tests/test_utils.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_utils.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_utils.py:3: in from dipy.segment.utils import remove_holes_and_islands ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/utils.py:4: in from scipy.ndimage import label /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/tests/test_utils.py", line 3, in from dipy.segment.utils import remove_holes_and_islands File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/segment/utils.py", line 4, in from scipy.ndimage import label File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting sims/tests/test_phantom.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/sims/tests/test_phantom.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/sims/tests/test_phantom.py:4: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/sims/tests/test_phantom.py", line 4, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________________ ERROR collecting sims/tests/test_voxel.py ___________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/sims/tests/test_voxel.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/sims/tests/test_voxel.py:9: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/sims/tests/test_voxel.py", line 9, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting stats/tests/test_analysis.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/stats/tests/test_analysis.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/stats/tests/test_analysis.py:4: in from dipy.stats.analysis import afq_profile, gaussian_weights ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/stats/analysis.py:4: in from scipy.ndimage import map_coordinates /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/stats/tests/test_analysis.py", line 4, in from dipy.stats.analysis import afq_profile, gaussian_weights File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/stats/analysis.py", line 4, in from scipy.ndimage import map_coordinates File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ___________________ ERROR collecting stats/tests/test_qc.py ____________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/stats/tests/test_qc.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/stats/tests/test_qc.py:4: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/stats/tests/test_qc.py", line 4, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting tracking/tests/test_distances.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_distances.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_distances.py:11: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_distances.py", line 11, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting tracking/tests/test_fbc.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_fbc.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_fbc.py:4: in from dipy.core.sphere import Sphere ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py:4: in from scipy import optimize /usr/lib64/python3.13/site-packages/scipy/__init__.py:134: in __getattr__ return _importlib.import_module(f'scipy.{name}') /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) /usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py:414: in from ._optimize import * /usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py:35: in from scipy.linalg import cholesky, issymmetric, LinAlgError /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_fbc.py", line 4, in from dipy.core.sphere import Sphere File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/sphere.py", line 4, in from scipy import optimize File "/usr/lib64/python3.13/site-packages/scipy/__init__.py", line 134, in __getattr__ return _importlib.import_module(f'scipy.{name}') File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib64/python3.13/site-packages/scipy/optimize/__init__.py", line 414, in from ._optimize import * File "/usr/lib64/python3.13/site-packages/scipy/optimize/_optimize.py", line 35, in from scipy.linalg import cholesky, issymmetric, LinAlgError File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting tracking/tests/test_life.py _________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_life.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_life.py:6: in import scipy.linalg as la /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_life.py", line 6, in import scipy.linalg as la File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _______________ ERROR collecting tracking/tests/test_metrics.py ________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_metrics.py:7: in from dipy.tracking import distances as pf, metrics as tm ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/metrics.py:4: in from scipy.interpolate import splev, splprep /usr/lib64/python3.13/site-packages/scipy/interpolate/__init__.py:167: in from ._interpolate import * /usr/lib64/python3.13/site-packages/scipy/interpolate/_interpolate.py:8: in import scipy.special as spec /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _____________ ERROR collecting tracking/tests/test_propagation.py ______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_propagation.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_propagation.py:4: in from dipy.data import default_sphere ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_propagation.py", line 4, in from dipy.data import default_sphere File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. __________ ERROR collecting tracking/tests/test_stopping_criterion.py __________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_stopping_criterion.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_stopping_criterion.py:3: in import scipy.ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_stopping_criterion.py", line 3, in import scipy.ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting tracking/tests/test_streamline.py ______________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_streamline.py:19: in from dipy.tracking.streamline import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/streamline.py:8: in from scipy.spatial.distance import cdist /usr/lib64/python3.13/site-packages/scipy/spatial/__init__.py:110: in from ._kdtree import * /usr/lib64/python3.13/site-packages/scipy/spatial/_kdtree.py:4: in from ._ckdtree import cKDTree, cKDTreeNode _ckdtree.pyx:1: in init scipy.spatial._ckdtree ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _______________ ERROR collecting tracking/tests/test_tracking.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_tracking.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_tracking.py:7: in from dipy.core.gradients import gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_tracking.py", line 7, in from dipy.core.gradients import gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting tracking/tests/test_utils.py _________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/tests/test_utils.py:9: in from dipy.tracking import metrics ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/tracking/metrics.py:4: in from scipy.interpolate import splev, splprep /usr/lib64/python3.13/site-packages/scipy/interpolate/__init__.py:167: in from ._interpolate import * /usr/lib64/python3.13/site-packages/scipy/interpolate/_interpolate.py:8: in import scipy.special as spec /usr/lib64/python3.13/site-packages/scipy/special/__init__.py:807: in from . import _ufuncs scipy/special/_ufuncs.pyx:1: in init scipy.special._ufuncs ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _______________ ERROR collecting utils/tests/test_tractogram.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/utils/tests/test_tractogram.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/utils/tests/test_tractogram.py:6: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/utils/tests/test_tractogram.py", line 6, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting utils/tests/test_volume.py __________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/utils/tests/test_volume.py:6: in from dipy.utils.volume import adjacency_calc ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/utils/volume.py:4: in from scipy.spatial.distance import pdist, squareform /usr/lib64/python3.13/site-packages/scipy/spatial/__init__.py:110: in from ._kdtree import * /usr/lib64/python3.13/site-packages/scipy/spatial/_kdtree.py:4: in from ._ckdtree import cKDTree, cKDTreeNode _ckdtree.pyx:1: in init scipy.spatial._ckdtree ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _____________ ERROR collecting viz/horizon/tab/tests/test_base.py ______________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/__init__.py:5: in from dipy.viz.horizon.app import horizon ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/horizon/app.py:7: in from dipy.io.stateful_tractogram import Space, StatefulTractogram ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ___________________ ERROR collecting viz/tests/test_apps.py ____________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/__init__.py:5: in from dipy.viz.horizon.app import horizon ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/horizon/app.py:7: in from dipy.io.stateful_tractogram import Space, StatefulTractogram ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ___________________ ERROR collecting viz/tests/test_fury.py ____________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/__init__.py:5: in from dipy.viz.horizon.app import horizon ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/horizon/app.py:7: in from dipy.io.stateful_tractogram import Space, StatefulTractogram ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject _________________ ERROR collecting viz/tests/test_regtools.py __________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/__init__.py:5: in from dipy.viz.horizon.app import horizon ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/horizon/app.py:7: in from dipy.io.stateful_tractogram import Space, StatefulTractogram ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ________________ ERROR collecting viz/tests/test_streamline.py _________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/__init__.py:5: in from dipy.viz.horizon.app import horizon ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/horizon/app.py:7: in from dipy.io.stateful_tractogram import Space, StatefulTractogram ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ___________________ ERROR collecting viz/tests/test_util.py ____________________ /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1310: in _find_and_load_unlocked ??? :488: in _call_with_frames_removed ??? :1387: in _gcd_import ??? :1360: in _find_and_load ??? :1331: in _find_and_load_unlocked ??? :935: in _load_unlocked ??? :1026: in exec_module ??? :488: in _call_with_frames_removed ??? ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/__init__.py:5: in from dipy.viz.horizon.app import horizon ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/viz/horizon/app.py:7: in from dipy.io.stateful_tractogram import Space, StatefulTractogram ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ________________ ERROR collecting workflows/tests/test_align.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_align.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_align.py:10: in from dipy.align.tests.test_imwarp import get_synthetic_warped_circle ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_align.py", line 10, in from dipy.align.tests.test_imwarp import get_synthetic_warped_circle File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _______________ ERROR collecting workflows/tests/test_denoise.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_denoise.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_denoise.py:8: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_denoise.py", line 8, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting workflows/tests/test_io.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_io.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_io.py:12: in import dipy.core.gradients as grad ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_io.py", line 12, in import dipy.core.gradients as grad File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _______________ ERROR collecting workflows/tests/test_masking.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_masking.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_masking.py:5: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_masking.py", line 5, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting workflows/tests/test_nn.py __________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_nn.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_nn.py:8: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_nn.py", line 8, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ___________ ERROR collecting workflows/tests/test_reconst_csa_csd.py ___________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_csa_csd.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_csa_csd.py:9: in from dipy.core.gradients import generate_bvecs ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_csa_csd.py", line 9, in from dipy.core.gradients import generate_bvecs File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _____________ ERROR collecting workflows/tests/test_reconst_dki.py _____________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_dki.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_dki.py:8: in from dipy.core.gradients import generate_bvecs ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_dki.py", line 8, in from dipy.core.gradients import generate_bvecs File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _____________ ERROR collecting workflows/tests/test_reconst_dsi.py _____________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_dsi.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_dsi.py:8: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_dsi.py", line 8, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _____________ ERROR collecting workflows/tests/test_reconst_dti.py _____________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_dti.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_dti.py:8: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_dti.py", line 8, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ____________ ERROR collecting workflows/tests/test_reconst_ivim.py _____________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_ivim.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_ivim.py:8: in from dipy.core.gradients import generate_bvecs, gradient_table ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_ivim.py", line 8, in from dipy.core.gradients import generate_bvecs, gradient_table File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ___________ ERROR collecting workflows/tests/test_reconst_mapmri.py ____________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_mapmri.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_mapmri.py:9: in from dipy.core.gradients import generate_bvecs ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py:5: in from scipy.linalg import inv, polar /usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py:203: in from ._misc import * /usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py:3: in from .blas import get_blas_funcs /usr/lib64/python3.13/site-packages/scipy/linalg/blas.py:213: in from scipy.linalg import _fblas E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_mapmri.py", line 9, in from dipy.core.gradients import generate_bvecs File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/core/gradients.py", line 5, in from scipy.linalg import inv, polar File "/usr/lib64/python3.13/site-packages/scipy/linalg/__init__.py", line 203, in from ._misc import * File "/usr/lib64/python3.13/site-packages/scipy/linalg/_misc.py", line 3, in from .blas import get_blas_funcs File "/usr/lib64/python3.13/site-packages/scipy/linalg/blas.py", line 213, in from scipy.linalg import _fblas Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ____________ ERROR collecting workflows/tests/test_reconst_rumba.py ____________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_rumba.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_rumba.py:8: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_reconst_rumba.py", line 8, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _______________ ERROR collecting workflows/tests/test_segment.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_segment.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_segment.py:8: in from dipy.align.streamlinear import BundleMinDistanceMetric ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py:27: in from dipy.align._public import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py:18: in from dipy.align.imaffine import ( ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py:44: in import scipy.ndimage as ndimage /usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py:152: in from ._filters import * /usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py:39: in from . import _nd_image E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_segment.py", line 8, in from dipy.align.streamlinear import BundleMinDistanceMetric File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/__init__.py", line 27, in from dipy.align._public import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/_public.py", line 18, in from dipy.align.imaffine import ( File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/align/imaffine.py", line 44, in import scipy.ndimage as ndimage File "/usr/lib64/python3.13/site-packages/scipy/ndimage/__init__.py", line 152, in from ._filters import * File "/usr/lib64/python3.13/site-packages/scipy/ndimage/_filters.py", line 39, in from . import _nd_image Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ________________ ERROR collecting workflows/tests/test_stats.py ________________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_stats.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_stats.py:10: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_stats.py", line 10, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. ______________ ERROR collecting workflows/tests/test_tracking.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_tracking.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_tracking.py:9: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_tracking.py", line 9, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. _________________ ERROR collecting workflows/tests/test_viz.py _________________ ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_viz.py:9: in from dipy.io.image import save_nifti ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/__init__.py:4: in from .dpy import Dpy ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/io/dpy.py:11: in import h5py /usr/lib64/python3.13/site-packages/h5py/__init__.py:45: in from ._conv import register_converters as _register_converters, \ h5py/_conv.pyx:1: in init h5py._conv ??? h5py/h5r.pyx:1: in init h5py.h5r ??? h5py/h5p.pyx:1: in init h5py.h5p ??? E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject ______________ ERROR collecting workflows/tests/test_workflow.py _______________ ImportError while importing test module '/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_workflow.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib64/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_workflow.py:8: in from dipy.data import get_fnames ../../BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py:9: in from scipy.sparse import load_npz /usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py:294: in from ._csr import * /usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py:11: in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, E ImportError: numpy.core.multiarray failed to import ------------------------------- Captured stderr -------------------------------- A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. Traceback (most recent call last): File "/usr/bin/pytest", line 8, in sys.exit(console_main()) File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 201, in console_main code = main() File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 175, in main ret: ExitCode | int = config.hook.pytest_cmdline_main(config=config) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 330, in pytest_cmdline_main return wrap_session(config, _main) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 283, in wrap_session session.exitstatus = doit(config, session) or 0 File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 336, in _main config.hook.pytest_collection(session=session) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 347, in pytest_collection session.perform_collect() File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 809, in perform_collect self.items.extend(self.genitems(node)) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 975, in genitems yield from self.genitems(subnode) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 970, in genitems rep, duplicate = self._collect_one_node(node, handle_dupes) File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 835, in _collect_one_node rep = collect_one_node(node) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 567, in collect_one_node rep: CollectReport = ihook.pytest_make_collect_report(collector=collector) File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 513, in __call__ return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 120, in _hookexec return self._inner_hookexec(hook_name, methods, kwargs, firstresult) File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 103, in _multicall res = hook_impl.function(*args) File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 391, in pytest_make_collect_report call = CallInfo.from_call( File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341, in from_call result: TResult | None = func() File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 389, in collect return list(collector.collect()) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 549, in collect self._register_setup_module_fixture() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 562, in _register_setup_module_fixture self.obj, ("setUpModule", "setup_module") File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 284, in obj self._obj = obj = self._getobj() File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 546, in _getobj return importtestmodule(self.path, self.config) File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 493, in importtestmodule mod = import_path( File "/usr/lib/python3.13/site-packages/_pytest/pathlib.py", line 587, in import_path importlib.import_module(module_name) File "/usr/lib64/python3.13/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "/usr/lib/python3.13/site-packages/_pytest/assertion/rewrite.py", line 184, in exec_module exec(co, module.__dict__) File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/workflows/tests/test_workflow.py", line 8, in from dipy.data import get_fnames File "/builddir/build/BUILD/python-dipy-1.10.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/dipy/data/__init__.py", line 9, in from scipy.sparse import load_npz File "/usr/lib64/python3.13/site-packages/scipy/sparse/__init__.py", line 294, in from ._csr import * File "/usr/lib64/python3.13/site-packages/scipy/sparse/_csr.py", line 11, in from ._sparsetools import (csr_tocsc, csr_tobsr, csr_count_blocks, Traceback (most recent call last): File "/usr/lib64/python3.13/site-packages/numpy/core/_multiarray_umath.py", line 44, in __getattr__ raise ImportError(msg) ImportError: A module that was compiled using NumPy 1.x cannot be run in NumPy 2.2.0 as it may crash. To support both 1.x and 2.x versions of NumPy, modules must be compiled with NumPy 2.0. Some module may need to rebuild instead e.g. with 'pybind11>=2.12'. If you are a user of the module, the easiest solution will be to downgrade to 'numpy<2' or try to upgrade the affected module. We expect that some modules will need time to support NumPy 2. =========================== short test summary info ============================ ERROR align/tests/test_api.py ERROR align/tests/test_crosscorr.py ERROR align/tests/test_expectmax.py ERROR align/tests/test_imaffine.py ERROR align/tests/test_imwarp.py ERROR align/tests/test_metrics.py ERROR align/tests/test_parzenhist.py ERROR align/tests/test_reslice.py ERROR align/tests/test_scalespace.py ERROR align/tests/test_streamlinear.py ERROR align/tests/test_streamwarp.py ERROR align/tests/test_sumsqdiff.py ERROR align/tests/test_transforms.py ERROR align/tests/test_vector_fields.py ERROR align/tests/test_whole_brain_slr.py ERROR core/tests/test_gradients.py ERROR core/tests/test_interpolation.py ERROR core/tests/test_optimize.py ERROR core/tests/test_rng.py ERROR core/tests/test_sphere.py ERROR core/tests/test_subdivide_octahedron.py ERROR data/tests/test_data.py ERROR data/tests/test_fetcher.py ERROR denoise/tests/test_ascm.py ERROR denoise/tests/test_denoise.py ERROR denoise/tests/test_gibbs.py - ValueError: numpy.dtype size changed, may... ERROR denoise/tests/test_kernel.py ERROR denoise/tests/test_lpca.py - ValueError: numpy.dtype size changed, may ... ERROR denoise/tests/test_noise_estimate.py ERROR denoise/tests/test_patch2self.py ERROR direction/tests/test_bootstrap_direction_getter.py - ValueError: numpy.... ERROR direction/tests/test_peaks.py - ValueError: numpy.dtype size changed, m... ERROR direction/tests/test_pmf.py - ValueError: numpy.dtype size changed, may... ERROR direction/tests/test_prob_direction_getter.py - ValueError: numpy.dtype... ERROR direction/tests/test_ptt_direction_getter.py - ValueError: numpy.dtype ... ERROR io/tests/test_dpy.py - ValueError: numpy.dtype size changed, may indica... ERROR io/tests/test_io.py - ValueError: numpy.dtype size changed, may indicat... ERROR io/tests/test_io_gradients.py - ValueError: numpy.dtype size changed, m... ERROR io/tests/test_io_peaks.py - ValueError: numpy.dtype size changed, may i... ERROR io/tests/test_stateful_tractogram.py - ValueError: numpy.dtype size cha... ERROR io/tests/test_streamline.py - ValueError: numpy.dtype size changed, may... ERROR io/tests/test_utils.py - ValueError: numpy.dtype size changed, may indi... ERROR nn/tests/test_cnn_1denoiser.py ERROR nn/tests/test_deepn4.py ERROR nn/tests/test_evac.py ERROR nn/tests/test_histo_resdnn.py ERROR nn/tests/test_synb0.py ERROR nn/tests/test_tf.py ERROR nn/tests/test_utils.py ERROR reconst/tests/test_bingham.py ERROR reconst/tests/test_cache.py ERROR reconst/tests/test_cross_validation.py ERROR reconst/tests/test_csdeconv.py ERROR reconst/tests/test_cti.py ERROR reconst/tests/test_dki.py ERROR reconst/tests/test_dki_micro.py ERROR reconst/tests/test_dsi.py ERROR reconst/tests/test_dsi_deconv.py ERROR reconst/tests/test_dsi_metrics.py ERROR reconst/tests/test_dti.py ERROR reconst/tests/test_eudx_dg.py - ValueError: numpy.dtype size changed, m... ERROR reconst/tests/test_forecast.py ERROR reconst/tests/test_fwdti.py ERROR reconst/tests/test_gqi.py ERROR reconst/tests/test_ivim.py ERROR reconst/tests/test_mapmri.py - ValueError: numpy.dtype size changed, ma... ERROR reconst/tests/test_mcsd.py ERROR reconst/tests/test_msdki.py ERROR reconst/tests/test_multi_voxel.py ERROR reconst/tests/test_odf.py ERROR reconst/tests/test_peak_finding.py ERROR reconst/tests/test_qtdmri.py - ValueError: numpy.dtype size changed, ma... ERROR reconst/tests/test_qti.py ERROR reconst/tests/test_rumba.py ERROR reconst/tests/test_sfm.py ERROR reconst/tests/test_shm.py - ValueError: numpy.dtype size changed, may i... ERROR reconst/tests/test_shore.py - ValueError: numpy.dtype size changed, may... ERROR reconst/tests/test_shore_metrics.py - ValueError: numpy.dtype size chan... ERROR reconst/tests/test_shore_odf.py ERROR reconst/tests/test_weights_method.py ERROR segment/tests/test_bundles.py ERROR segment/tests/test_clustering.py - ValueError: numpy.dtype size changed... ERROR segment/tests/test_fss.py ERROR segment/tests/test_mask.py ERROR segment/tests/test_mrf.py ERROR segment/tests/test_qbx.py - ValueError: numpy.dtype size changed, may i... ERROR segment/tests/test_quickbundles.py - ValueError: numpy.dtype size chang... ERROR segment/tests/test_tissue.py - ValueError: numpy.dtype size changed, ma... ERROR segment/tests/test_utils.py ERROR sims/tests/test_phantom.py ERROR sims/tests/test_voxel.py ERROR stats/tests/test_analysis.py ERROR stats/tests/test_qc.py ERROR tracking/tests/test_distances.py ERROR tracking/tests/test_fbc.py ERROR tracking/tests/test_life.py ERROR tracking/tests/test_metrics.py - ValueError: numpy.dtype size changed, ... ERROR tracking/tests/test_propagation.py ERROR tracking/tests/test_stopping_criterion.py ERROR tracking/tests/test_streamline.py - ValueError: numpy.dtype size change... ERROR tracking/tests/test_tracking.py ERROR tracking/tests/test_utils.py - ValueError: numpy.dtype size changed, ma... ERROR utils/tests/test_tractogram.py ERROR utils/tests/test_volume.py - ValueError: numpy.dtype size changed, may ... ERROR viz/horizon/tab/tests/test_base.py - ValueError: numpy.dtype size chang... ERROR viz/tests/test_apps.py - ValueError: numpy.dtype size changed, may indi... ERROR viz/tests/test_fury.py - ValueError: numpy.dtype size changed, may indi... ERROR viz/tests/test_regtools.py - ValueError: numpy.dtype size changed, may ... ERROR viz/tests/test_streamline.py - ValueError: numpy.dtype size changed, ma... ERROR viz/tests/test_util.py - ValueError: numpy.dtype size changed, may indi... ERROR workflows/tests/test_align.py ERROR workflows/tests/test_denoise.py ERROR workflows/tests/test_io.py ERROR workflows/tests/test_masking.py ERROR workflows/tests/test_nn.py ERROR workflows/tests/test_reconst_csa_csd.py ERROR workflows/tests/test_reconst_dki.py ERROR workflows/tests/test_reconst_dsi.py ERROR workflows/tests/test_reconst_dti.py ERROR workflows/tests/test_reconst_ivim.py ERROR workflows/tests/test_reconst_mapmri.py ERROR workflows/tests/test_reconst_rumba.py ERROR workflows/tests/test_segment.py ERROR workflows/tests/test_stats.py ERROR workflows/tests/test_tracking.py ERROR workflows/tests/test_viz.py - ValueError: numpy.dtype size changed, may... ERROR workflows/tests/test_workflow.py !!!!!!!!!!!!!!!!!! Interrupted: 127 errors during collection !!!!!!!!!!!!!!!!!!! ============================= 127 errors in 5.48s ============================== RPM build errors: error: Bad exit status from /var/tmp/rpm-tmp.lAhvfg (%check) Bad exit status from /var/tmp/rpm-tmp.lAhvfg (%check) Finish: rpmbuild python-dipy-1.10.0-4.fc42.src.rpm Finish: build phase for python-dipy-1.10.0-4.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-s390x-1734111344.275356/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names ERROR: Exception(/var/lib/copr-rpmbuild/results/python-dipy-1.10.0-4.fc42.src.rpm) Config(fedora-rawhide-s390x) 9 minutes 29 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_failure=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot ERROR: Command failed: # /usr/bin/systemd-nspawn -q -M 5e20c22bf4044408848902704a1fc3ca -D /var/lib/mock/fedora-rawhide-s390x-1734111344.275356/root -a -u mockbuild --capability=cap_ipc_lock --rlimit=RLIMIT_NOFILE=10240 --capability=cap_ipc_lock --bind=/tmp/mock-resolv.t93vix7m:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/fuse --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin '--setenv=PROMPT_COMMAND=printf "\033]0;\007"' '--setenv=PS1= \s-\v\$ ' --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c '/usr/bin/rpmbuild -ba --noprep --target s390x /builddir/build/originals/python-dipy.spec' Copr build error: Build failed