Warning: Permanently added '3.81.90.100' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/7411801-fedora-39-aarch64 --chroot fedora-39-aarch64 Version: 0.72 PID: 6861 Logging PID: 6862 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 7411801, 'buildroot_pkgs': [], 'chroot': 'fedora-39-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': '21879d95a818c762c5aa9b89bbd7913c8f52762c', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/morphio', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'morphio', 'package_version': '3.3.9-2', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-39-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/ankursinha', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'submitter': 'https://src.fedoraproject.org/user/ankursinha', 'tags': [], 'task_id': '7411801-fedora-39-aarch64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/morphio /var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/morphio', '/var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio'... Running: git checkout 21879d95a818c762c5aa9b89bbd7913c8f52762c -- cmd: ['git', 'checkout', '21879d95a818c762c5aa9b89bbd7913c8f52762c', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio rc: 0 stdout: stderr: Note: switching to '21879d95a818c762c5aa9b89bbd7913c8f52762c'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 21879d9 automatic import of morphio Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading MorphIO-3.3.9.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o MorphIO-3.3.9.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/morphio/MorphIO-3.3.9.tar.gz/md5/789314860fdd6941794dc69f51175da2/MorphIO-3.3.9.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 3484k 100 3484k 0 0 146M 0 --:--:-- --:--:-- --:--:-- 147M INFO: Reading stdout from command: md5sum MorphIO-3.3.9.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio/morphio.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714927377.127991 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.5 starting (python version = 3.12.1, NVR = mock-5.5-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio/morphio.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714927377.127991 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio/morphio.spec) Config(fedora-39-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.5 INFO: Mock Version: 5.5 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-aarch64-bootstrap-1714927377.127991/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-aarch64-bootstrap-1714927377.127991/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/8167a849fc88254ed1ff4b2a3c1e3ada922bf037bcc60f46293b2e9792332c15/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/8167a849fc88254ed1ff4b2a3c1e3ada922bf037bcc60f46293b2e9792332c15/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 130 MB/s | 17 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 130 MB/s | 74 MB 00:00 fedora 57 MB/s | 86 MB 00:01 updates 41 MB/s | 34 MB 00:00 Last metadata expiration check: 0:00:03 ago on Sun May 5 16:43:42 2024. Package python3-dnf-4.19.2-1.fc39.noarch is already installed. Dependencies resolved. ========================================================================================================================== Package Arch Version Repository Size ========================================================================================================================== Installing: python3-dnf-plugins-core noarch 4.6.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 302 k Upgrading: dnf noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 491 k dnf-data noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40 k python3-dnf noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 553 k yum noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k Installing dependencies: dbus-libs aarch64 1:1.14.10-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 156 k python3-dateutil noarch 1:2.8.2-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 345 k python3-dbus aarch64 1.3.2-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 146 k python3-distro noarch 1.9.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45 k python3-six noarch 1.16.0-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python3-systemd aarch64 235-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 101 k Transaction Summary ========================================================================================================================== Install 7 Packages Upgrade 4 Packages Total download size: 2.2 M Downloading Packages: (1/11): python3-dbus-1.3.2-6.fc40.aarch64.rpm 1.7 MB/s | 146 kB 00:00 (2/11): python3-distro-1.9.0-3.fc40.noarch.rpm 3.1 MB/s | 45 kB 00:00 (3/11): dbus-libs-1.14.10-3.fc40.aarch64.rpm 1.4 MB/s | 156 kB 00:00 (4/11): python3-six-1.16.0-14.fc40.noarch.rpm 2.1 MB/s | 41 kB 00:00 (5/11): python3-dnf-plugins-core-4.6.0-1.fc41.n 9.2 MB/s | 302 kB 00:00 (6/11): python3-dateutil-2.8.2-13.fc40.noarch.r 2.4 MB/s | 345 kB 00:00 (7/11): python3-systemd-235-9.fc40.aarch64.rpm 4.6 MB/s | 101 kB 00:00 (8/11): dnf-data-4.19.2-1.fc41.noarch.rpm 1.6 MB/s | 40 kB 00:00 (9/11): dnf-4.19.2-1.fc41.noarch.rpm 15 MB/s | 491 kB 00:00 (10/11): python3-dnf-4.19.2-1.fc41.noarch.rpm 20 MB/s | 553 kB 00:00 (11/11): yum-4.19.2-1.fc41.noarch.rpm 1.9 MB/s | 37 kB 00:00 -------------------------------------------------------------------------------- Total 12 MB/s | 2.2 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : dnf-data-4.19.2-1.fc41.noarch 1/15 Upgrading : python3-dnf-4.19.2-1.fc41.noarch 2/15 Upgrading : dnf-4.19.2-1.fc41.noarch 3/15 Running scriptlet: dnf-4.19.2-1.fc41.noarch 3/15 Installing : python3-systemd-235-9.fc40.aarch64 4/15 Installing : python3-six-1.16.0-14.fc40.noarch 5/15 Installing : python3-dateutil-1:2.8.2-13.fc40.noarch 6/15 Installing : python3-distro-1.9.0-3.fc40.noarch 7/15 Installing : dbus-libs-1:1.14.10-3.fc40.aarch64 8/15 Installing : python3-dbus-1.3.2-6.fc40.aarch64 9/15 Installing : python3-dnf-plugins-core-4.6.0-1.fc41.noarch 10/15 Upgrading : yum-4.19.2-1.fc41.noarch 11/15 Cleanup : yum-4.19.2-1.fc39.noarch 12/15 Running scriptlet: dnf-4.19.2-1.fc39.noarch 13/15 Cleanup : dnf-4.19.2-1.fc39.noarch 13/15 Running scriptlet: dnf-4.19.2-1.fc39.noarch 13/15 Cleanup : python3-dnf-4.19.2-1.fc39.noarch 14/15 Cleanup : dnf-data-4.19.2-1.fc39.noarch 15/15 Running scriptlet: dnf-data-4.19.2-1.fc39.noarch 15/15 Verifying : dbus-libs-1:1.14.10-3.fc40.aarch64 1/15 Verifying : python3-dateutil-1:2.8.2-13.fc40.noarch 2/15 Verifying : python3-dbus-1.3.2-6.fc40.aarch64 3/15 Verifying : python3-distro-1.9.0-3.fc40.noarch 4/15 Verifying : python3-dnf-plugins-core-4.6.0-1.fc41.noarch 5/15 Verifying : python3-six-1.16.0-14.fc40.noarch 6/15 Verifying : python3-systemd-235-9.fc40.aarch64 7/15 Verifying : dnf-4.19.2-1.fc41.noarch 8/15 Verifying : dnf-4.19.2-1.fc39.noarch 9/15 Verifying : dnf-data-4.19.2-1.fc41.noarch 10/15 Verifying : dnf-data-4.19.2-1.fc39.noarch 11/15 Verifying : python3-dnf-4.19.2-1.fc41.noarch 12/15 Verifying : python3-dnf-4.19.2-1.fc39.noarch 13/15 Verifying : yum-4.19.2-1.fc41.noarch 14/15 Verifying : yum-4.19.2-1.fc39.noarch 15/15 Upgraded: dnf-4.19.2-1.fc41.noarch dnf-data-4.19.2-1.fc41.noarch python3-dnf-4.19.2-1.fc41.noarch yum-4.19.2-1.fc41.noarch Installed: dbus-libs-1:1.14.10-3.fc40.aarch64 python3-dateutil-1:2.8.2-13.fc40.noarch python3-dbus-1.3.2-6.fc40.aarch64 python3-distro-1.9.0-3.fc40.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch python3-six-1.16.0-14.fc40.noarch python3-systemd-235-9.fc40.aarch64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-aarch64-1714927377.127991/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.aarch64 rpm-sequoia-1.6.0-1.fc39.aarch64 python3-dnf-4.19.2-1.fc41.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch yum-4.19.2-1.fc41.noarch Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 127 MB/s | 17 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 106 MB/s | 74 MB 00:00 fedora 55 MB/s | 86 MB 00:01 updates 53 MB/s | 34 MB 00:00 Last metadata expiration check: 0:00:03 ago on Sun May 5 16:44:37 2024. Dependencies resolved. ========================================================================================================================================= Package Arch Version Repository Size ========================================================================================================================================= Installing group/module packages: bash aarch64 5.2.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 M bzip2 aarch64 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 52 k coreutils aarch64 9.5-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M cpio aarch64 2.15-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 285 k diffutils aarch64 3.10-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 395 k fedora-release-common noarch 41-0.9 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k findutils aarch64 1:4.9.0-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 489 k gawk aarch64 5.3.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M glibc-minimal-langpack aarch64 2.39.9000-17.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 111 k grep aarch64 3.11-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 288 k gzip aarch64 1.13-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 163 k info aarch64 7.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 183 k patch aarch64 2.7.6-24.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 130 k redhat-rpm-config noarch 288-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 75 k rpm-build aarch64 4.19.1.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 72 k sed aarch64 4.9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 307 k shadow-utils aarch64 2:4.15.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 M tar aarch64 2:1.35-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 848 k unzip aarch64 6.0-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 185 k util-linux aarch64 2.40-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M which aarch64 2.21-41.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 42 k xz aarch64 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 533 k Installing dependencies: alternatives aarch64 1.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k ansible-srpm-macros noarch 1-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k audit-libs aarch64 4.0.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 126 k authselect aarch64 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 141 k authselect-libs aarch64 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 205 k basesystem noarch 11-20.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.2 k binutils aarch64 2.42.50-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.8 M binutils-gold aarch64 2.42.50-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 968 k bzip2-libs aarch64 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43 k ca-certificates noarch 2023.2.62_v7.0.401-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 862 k coreutils-common aarch64 9.5-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 M cracklib aarch64 2.9.11-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83 k crypto-policies noarch 20240320-1.git58e3d95.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 65 k curl aarch64 8.7.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 306 k cyrus-sasl-lib aarch64 2.1.28-19.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 779 k debugedit aarch64 5.0-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78 k dwz aarch64 0.15-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 137 k ed aarch64 1.20.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81 k efi-srpm-macros noarch 5-11.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k elfutils aarch64 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 562 k elfutils-debuginfod-client aarch64 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38 k elfutils-default-yama-scope noarch 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 k elfutils-libelf aarch64 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 209 k elfutils-libs aarch64 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 264 k fedora-gpg-keys noarch 41-0.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 121 k fedora-release noarch 41-0.9 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11 k fedora-release-identity-basic noarch 41-0.9 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12 k fedora-repos noarch 41-0.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.3 k fedora-repos-rawhide noarch 41-0.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.9 k file aarch64 5.45-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 50 k file-libs aarch64 5.45-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 763 k filesystem aarch64 3.18-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M fonts-srpm-macros noarch 1:2.0.5-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 27 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========================================================================================================================================= Install 153 Packages Total download size: 52 M Installed size: 307 M Downloading Packages: (1/153): gdb-minimal-14.2-6.fc41.aarch64.rpm 87 MB/s | 4.1 MB 00:00 (2/153): ansible-srpm-macros-1-15.fc41.noarch.r 327 kB/s | 21 kB 00:00 (3/153): authselect-1.5.0-5.fc41.aarch64.rpm 3.5 MB/s | 141 kB 00:00 (4/153): alternatives-1.26-3.fc40.aarch64.rpm 355 kB/s | 39 kB 00:00 (5/153): audit-libs-4.0.1-1.fc41.aarch64.rpm 1.7 MB/s | 126 kB 00:00 (6/153): basesystem-11-20.fc40.noarch.rpm 368 kB/s | 7.2 kB 00:00 (7/153): authselect-libs-1.5.0-5.fc41.aarch64.r 7.2 MB/s | 205 kB 00:00 (8/153): binutils-gold-2.42.50-6.fc41.aarch64.r 22 MB/s | 968 kB 00:00 (9/153): binutils-2.42.50-6.fc41.aarch64.rpm 121 MB/s | 6.8 MB 00:00 (10/153): bzip2-1.0.8-18.fc40.aarch64.rpm 1.8 MB/s | 52 kB 00:00 (11/153): bzip2-libs-1.0.8-18.fc40.aarch64.rpm 1.8 MB/s | 43 kB 00:00 (12/153): ca-certificates-2023.2.62_v7.0.401-6. 28 MB/s | 862 kB 00:00 (13/153): coreutils-9.5-1.fc41.aarch64.rpm 42 MB/s | 1.1 MB 00:00 (14/153): cpio-2.15-1.fc40.aarch64.rpm 16 MB/s | 285 kB 00:00 (15/153): bash-5.2.26-3.fc40.aarch64.rpm 13 MB/s | 1.8 MB 00:00 (16/153): coreutils-common-9.5-1.fc41.aarch64.r 57 MB/s | 2.1 MB 00:00 (17/153): cracklib-2.9.11-5.fc40.aarch64.rpm 4.2 MB/s | 83 kB 00:00 (18/153): crypto-policies-20240320-1.git58e3d95 3.2 MB/s | 65 kB 00:00 (19/153): cyrus-sasl-lib-2.1.28-19.fc40.aarch64 38 MB/s | 779 kB 00:00 (20/153): curl-8.7.1-1.fc41.aarch64.rpm 11 MB/s | 306 kB 00:00 (21/153): debugedit-5.0-15.fc41.aarch64.rpm 2.4 MB/s | 78 kB 00:00 (22/153): dwz-0.15-6.fc40.aarch64.rpm 8.0 MB/s | 137 kB 00:00 (23/153): diffutils-3.10-5.fc40.aarch64.rpm 14 MB/s | 395 kB 00:00 (24/153): ed-1.20.2-1.fc41.aarch64.rpm 3.7 MB/s | 81 kB 00:00 (25/153): efi-srpm-macros-5-11.fc40.noarch.rpm 982 kB/s | 22 kB 00:00 (26/153): elfutils-0.191-7.fc41.aarch64.rpm 26 MB/s | 562 kB 00:00 (27/153): elfutils-debuginfod-client-0.191-7.fc 1.9 MB/s | 38 kB 00:00 (28/153): elfutils-default-yama-scope-0.191-7.f 702 kB/s | 13 kB 00:00 (29/153): elfutils-libelf-0.191-7.fc41.aarch64. 10 MB/s | 209 kB 00:00 (30/153): elfutils-libs-0.191-7.fc41.aarch64.rp 13 MB/s | 264 kB 00:00 (31/153): fedora-gpg-keys-41-0.1.noarch.rpm 5.3 MB/s | 121 kB 00:00 (32/153): fedora-release-41-0.9.noarch.rpm 550 kB/s | 11 kB 00:00 (33/153): fedora-release-common-41-0.9.noarch.r 900 kB/s | 22 kB 00:00 (34/153): fedora-repos-41-0.1.noarch.rpm 483 kB/s | 9.3 kB 00:00 (35/153): fedora-release-identity-basic-41-0.9. 532 kB/s | 12 kB 00:00 (36/153): fedora-repos-rawhide-41-0.1.noarch.rp 432 kB/s | 8.9 kB 00:00 (37/153): file-5.45-5.fc41.aarch64.rpm 2.2 MB/s | 50 kB 00:00 (38/153): file-libs-5.45-5.fc41.aarch64.rpm 32 MB/s | 763 kB 00:00 (39/153): findutils-4.9.0-8.fc40.aarch64.rpm 22 MB/s | 489 kB 00:00 (40/153): fonts-srpm-macros-2.0.5-14.fc40.noarc 1.2 MB/s | 27 kB 00:00 (41/153): filesystem-3.18-9.fc41.aarch64.rpm 33 MB/s | 1.1 MB 00:00 (42/153): fpc-srpm-macros-1.3-12.fc40.noarch.rp 542 kB/s | 7.8 kB 00:00 (43/153): forge-srpm-macros-0.3.1-1.fc41.noarch 775 kB/s | 19 kB 00:00 (44/153): gawk-5.3.0-3.fc40.aarch64.rpm 38 MB/s | 1.0 MB 00:00 (45/153): gdbm-1.23-6.fc40.aarch64.rpm 7.0 MB/s | 149 kB 00:00 (46/153): gdbm-libs-1.23-6.fc40.aarch64.rpm 2.8 MB/s | 56 kB 00:00 (47/153): ghc-srpm-macros-1.9.1-1.fc41.noarch.r 470 kB/s | 9.0 kB 00:00 (48/153): glibc-2.39.9000-17.fc41.aarch64.rpm 76 MB/s | 1.9 MB 00:00 (49/153): glibc-common-2.39.9000-17.fc41.aarch6 14 MB/s | 388 kB 00:00 (50/153): glibc-gconv-extra-2.39.9000-17.fc41.a 74 MB/s | 2.0 MB 00:00 (51/153): glibc-minimal-langpack-2.39.9000-17.f 5.4 MB/s | 111 kB 00:00 (52/153): gnat-srpm-macros-6-5.fc40.noarch.rpm 629 kB/s | 8.8 kB 00:00 (53/153): gmp-6.3.0-1.fc41.aarch64.rpm 10 MB/s | 270 kB 00:00 (54/153): go-srpm-macros-3.6.0-1.fc41.noarch.rp 1.4 MB/s | 28 kB 00:00 (55/153): grep-3.11-8.fc41.aarch64.rpm 14 MB/s | 288 kB 00:00 (56/153): gzip-1.13-1.fc40.aarch64.rpm 7.4 MB/s | 163 kB 00:00 (57/153): info-7.1-2.fc40.aarch64.rpm 8.7 MB/s | 183 kB 00:00 (58/153): jansson-2.13.1-9.fc40.aarch64.rpm 2.3 MB/s | 46 kB 00:00 (59/153): kernel-srpm-macros-1.0-23.fc41.noarch 516 kB/s | 9.8 kB 00:00 (60/153): keyutils-libs-1.6.3-3.fc40.aarch64.rp 1.6 MB/s | 32 kB 00:00 (61/153): krb5-libs-1.21.2-5.fc40.aarch64.rpm 32 MB/s | 768 kB 00:00 (62/153): libacl-2.3.2-1.fc40.aarch64.rpm 1.2 MB/s | 25 kB 00:00 (63/153): libarchive-3.7.4-1.fc41.aarch64.rpm 19 MB/s | 406 kB 00:00 (64/153): libattr-2.5.2-3.fc40.aarch64.rpm 931 kB/s | 18 kB 00:00 (65/153): libbrotli-1.1.0-3.fc40.aarch64.rpm 21 MB/s | 346 kB 00:00 (66/153): libblkid-2.40-13.fc41.aarch64.rpm 4.9 MB/s | 126 kB 00:00 (67/153): libcap-2.69-8.fc41.aarch64.rpm 4.3 MB/s | 87 kB 00:00 (68/153): libcap-ng-0.8.5-1.fc41.aarch64.rpm 1.6 MB/s | 32 kB 00:00 (69/153): libcom_err-1.47.0-5.fc40.aarch64.rpm 1.3 MB/s | 25 kB 00:00 (70/153): libcurl-8.7.1-1.fc41.aarch64.rpm 16 MB/s | 350 kB 00:00 (71/153): libeconf-0.6.2-1.fc41.aarch64.rpm 1.6 MB/s | 32 kB 00:00 (72/153): libevent-2.1.12-12.fc40.aarch64.rpm 15 MB/s | 255 kB 00:00 (73/153): libffi-3.4.6-1.fc41.aarch64.rpm 2.6 MB/s | 38 kB 00:00 (74/153): libfdisk-2.40-13.fc41.aarch64.rpm 6.1 MB/s | 157 kB 00:00 (75/153): libgcc-14.0.1-0.16.fc41.aarch64.rpm 5.5 MB/s | 111 kB 00:00 (76/153): libgomp-14.0.1-0.16.fc41.aarch64.rpm 16 MB/s | 338 kB 00:00 (77/153): libidn2-2.3.7-1.fc40.aarch64.rpm 5.5 MB/s | 113 kB 00:00 (78/153): libmount-2.40-13.fc41.aarch64.rpm 7.5 MB/s | 154 kB 00:00 (79/153): libnghttp2-1.61.0-1.fc41.aarch64.rpm 3.9 MB/s | 77 kB 00:00 (80/153): libnsl2-2.0.1-1.fc40.aarch64.rpm 1.5 MB/s | 30 kB 00:00 (81/153): libpkgconf-2.1.0-1.fc40.aarch64.rpm 1.9 MB/s | 38 kB 00:00 (82/153): libpsl-0.21.5-3.fc40.aarch64.rpm 3.2 MB/s | 64 kB 00:00 (83/153): libpwquality-1.4.5-9.fc40.aarch64.rpm 5.3 MB/s | 109 kB 00:00 (84/153): libselinux-3.6-4.fc40.aarch64.rpm 3.7 MB/s | 88 kB 00:00 (85/153): libsemanage-3.6-3.fc40.aarch64.rpm 5.6 MB/s | 115 kB 00:00 (86/153): libsepol-3.6-3.fc40.aarch64.rpm 16 MB/s | 327 kB 00:00 (87/153): libsmartcols-2.40-13.fc41.aarch64.rpm 4.1 MB/s | 83 kB 00:00 (88/153): libssh-0.10.6-6.fc41.aarch64.rpm 9.9 MB/s | 214 kB 00:00 (89/153): libssh-config-0.10.6-6.fc41.noarch.rp 456 kB/s | 9.1 kB 00:00 (90/153): libstdc++-14.0.1-0.16.fc41.aarch64.rp 34 MB/s | 827 kB 00:00 (91/153): libtirpc-1.3.4-1.rc3.fc41.aarch64.rpm 5.9 MB/s | 94 kB 00:00 (92/153): libtasn1-4.19.0-6.fc40.aarch64.rpm 2.9 MB/s | 73 kB 00:00 (93/153): libtool-ltdl-2.4.7-10.fc40.aarch64.rp 1.8 MB/s | 36 kB 00:00 (94/153): libunistring-1.1-7.fc41.aarch64.rpm 24 MB/s | 544 kB 00:00 (95/153): libutempter-1.2.1-13.fc40.aarch64.rpm 1.3 MB/s | 27 kB 00:00 (96/153): libuuid-2.40-13.fc41.aarch64.rpm 1.5 MB/s | 28 kB 00:00 (97/153): libverto-0.3.2-8.fc40.aarch64.rpm 1.0 MB/s | 21 kB 00:00 (98/153): libxcrypt-4.4.36-5.fc40.aarch64.rpm 6.0 MB/s | 123 kB 00:00 (99/153): libxml2-2.12.6-1.fc41.aarch64.rpm 30 MB/s | 687 kB 00:00 (100/153): libzstd-1.5.6-1.fc41.aarch64.rpm 14 MB/s | 287 kB 00:00 (101/153): lua-libs-5.4.6-5.fc40.aarch64.rpm 6.2 MB/s | 131 kB 00:00 (102/153): lua-srpm-macros-1-13.fc40.noarch.rpm 624 kB/s | 8.7 kB 00:00 (103/153): mpfr-4.2.1-3.fc40.aarch64.rpm 19 MB/s | 324 kB 00:00 (104/153): ncurses-base-6.4-12.20240127.fc40.no 2.9 MB/s | 64 kB 00:00 (105/153): lz4-libs-1.9.4-6.fc40.aarch64.rpm 2.5 MB/s | 68 kB 00:00 (106/153): ncurses-libs-6.4-12.20240127.fc40.aa 16 MB/s | 329 kB 00:00 (107/153): ocaml-srpm-macros-9-3.fc40.noarch.rp 451 kB/s | 9.1 kB 00:00 (108/153): openblas-srpm-macros-2-17.fc41.noarc 380 kB/s | 7.7 kB 00:00 (109/153): openldap-2.6.7-1.fc40.aarch64.rpm 11 MB/s | 252 kB 00:00 (110/153): p11-kit-0.25.3-4.fc40.aarch64.rpm 21 MB/s | 486 kB 00:00 (111/153): p11-kit-trust-0.25.3-4.fc40.aarch64. 7.1 MB/s | 142 kB 00:00 (112/153): openssl-libs-3.2.1-6.fc41.aarch64.rp 59 MB/s | 2.2 MB 00:00 (113/153): package-notes-srpm-macros-0.5-11.fc4 711 kB/s | 9.9 kB 00:00 (114/153): pam-libs-1.6.1-1.fc41.aarch64.rpm 3.9 MB/s | 57 kB 00:00 (115/153): patch-2.7.6-24.fc40.aarch64.rpm 6.4 MB/s | 130 kB 00:00 (116/153): pam-1.6.1-1.fc41.aarch64.rpm 18 MB/s | 527 kB 00:00 (117/153): pcre2-10.43-2.fc41.aarch64.rpm 11 MB/s | 226 kB 00:00 (118/153): pcre2-syntax-10.43-2.fc41.noarch.rpm 7.3 MB/s | 149 kB 00:00 (119/153): perl-srpm-macros-1-53.fc40.noarch.rp 436 kB/s | 8.4 kB 00:00 (120/153): pkgconf-2.1.0-1.fc40.aarch64.rpm 2.2 MB/s | 44 kB 00:00 (121/153): pkgconf-m4-2.1.0-1.fc40.noarch.rpm 728 kB/s | 14 kB 00:00 (122/153): pkgconf-pkg-config-2.1.0-1.fc40.aarc 500 kB/s | 9.7 kB 00:00 (123/153): popt-1.19-6.fc40.aarch64.rpm 2.8 MB/s | 60 kB 00:00 (124/153): publicsuffix-list-dafsa-20240107-3.f 2.8 MB/s | 58 kB 00:00 (125/153): pyproject-srpm-macros-1.12.0-1.fc40. 708 kB/s | 14 kB 00:00 (126/153): python-srpm-macros-3.12-9.fc41.noarc 1.2 MB/s | 24 kB 00:00 (127/153): qt5-srpm-macros-5.15.13-1.fc41.noarc 424 kB/s | 8.5 kB 00:00 (128/153): qt6-srpm-macros-6.7.0-1.fc41.noarch. 467 kB/s | 9.0 kB 00:00 (129/153): readline-8.2-8.fc40.aarch64.rpm 11 MB/s | 213 kB 00:00 (130/153): redhat-rpm-config-288-1.fc41.noarch. 3.8 MB/s | 75 kB 00:00 (131/153): rpm-4.19.1.1-1.fc40.aarch64.rpm 23 MB/s | 508 kB 00:00 (132/153): rpm-build-4.19.1.1-1.fc40.aarch64.rp 3.6 MB/s | 72 kB 00:00 (133/153): rpm-build-libs-4.19.1.1-1.fc40.aarch 4.4 MB/s | 92 kB 00:00 (134/153): rpm-libs-4.19.1.1-1.fc40.aarch64.rpm 13 MB/s | 306 kB 00:00 (135/153): rust-srpm-macros-26.2-1.fc41.noarch. 898 kB/s | 13 kB 00:00 (136/153): rpm-sequoia-1.6.0-2.fc40.aarch64.rpm 28 MB/s | 817 kB 00:00 (137/153): sed-4.9-1.fc40.aarch64.rpm 13 MB/s | 307 kB 00:00 (138/153): setup-2.14.5-2.fc40.noarch.rpm 7.0 MB/s | 148 kB 00:00 (139/153): shadow-utils-4.15.1-2.fc41.aarch64.r 46 MB/s | 1.3 MB 00:00 (140/153): sqlite-libs-3.45.3-1.fc41.aarch64.rp 30 MB/s | 705 kB 00:00 (141/153): systemd-libs-255.5-1.fc41.aarch64.rp 31 MB/s | 694 kB 00:00 (142/153): unzip-6.0-63.fc40.aarch64.rpm 12 MB/s | 185 kB 00:00 (143/153): tar-1.35-3.fc40.aarch64.rpm 28 MB/s | 848 kB 00:00 (144/153): util-linux-2.40-13.fc41.aarch64.rpm 46 MB/s | 1.2 MB 00:00 (145/153): util-linux-core-2.40-13.fc41.aarch64 19 MB/s | 519 kB 00:00 (146/153): xxhash-libs-0.8.2-2.fc40.aarch64.rpm 2.4 MB/s | 34 kB 00:00 (147/153): which-2.21-41.fc40.aarch64.rpm 1.6 MB/s | 42 kB 00:00 (148/153): xz-libs-5.4.6-3.fc41.aarch64.rpm 7.3 MB/s | 108 kB 00:00 (149/153): xz-5.4.6-3.fc41.aarch64.rpm 19 MB/s | 533 kB 00:00 (150/153): zig-srpm-macros-1-2.fc40.noarch.rpm 417 kB/s | 8.0 kB 00:00 (151/153): zip-3.0-40.fc40.aarch64.rpm 17 MB/s | 263 kB 00:00 (152/153): zstd-1.5.6-1.fc41.aarch64.rpm 27 MB/s | 457 kB 00:00 (153/153): zlib-ng-compat-2.1.6-2.fc40.aarch64. 2.6 MB/s | 66 kB 00:00 -------------------------------------------------------------------------------- Total 42 MB/s | 52 MB 00:01 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-9.fc41.aarch64 1/1 Preparing : 1/1 Installing : libgcc-14.0.1-0.16.fc41.aarch64 1/153 Running scriptlet: libgcc-14.0.1-0.16.fc41.aarch64 1/153 Installing : crypto-policies-20240320-1.git58e3d95.fc41.noarc 2/153 Running scriptlet: crypto-policies-20240320-1.git58e3d95.fc41.noarc 2/153 Installing : fedora-release-identity-basic-41-0.9.noarch 3/153 Installing : fedora-repos-rawhide-41-0.1.noarch 4/153 Installing : fedora-gpg-keys-41-0.1.noarch 5/153 Installing : fedora-repos-41-0.1.noarch 6/153 Installing : fedora-release-common-41-0.9.noarch 7/153 Installing : fedora-release-41-0.9.noarch 8/153 Installing : setup-2.14.5-2.fc40.noarch 9/153 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.5-2.fc40.noarch 9/153 Installing : filesystem-3.18-9.fc41.aarch64 10/153 Installing : basesystem-11-20.fc40.noarch 11/153 Installing : rust-srpm-macros-26.2-1.fc41.noarch 12/153 Installing : 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lz4-libs-1.9.4-6.fc40.aarch64 45/153 Installing : mpfr-4.2.1-3.fc40.aarch64 46/153 Installing : gawk-5.3.0-3.fc40.aarch64 47/153 Installing : dwz-0.15-6.fc40.aarch64 48/153 Installing : unzip-6.0-63.fc40.aarch64 49/153 Installing : file-libs-5.45-5.fc41.aarch64 50/153 Installing : file-5.45-5.fc41.aarch64 51/153 Installing : alternatives-1.26-3.fc40.aarch64 52/153 Installing : jansson-2.13.1-9.fc40.aarch64 53/153 Installing : libcap-ng-0.8.5-1.fc41.aarch64 54/153 Installing : audit-libs-4.0.1-1.fc41.aarch64 55/153 Installing : pam-libs-1.6.1-1.fc41.aarch64 56/153 Installing : libcap-2.69-8.fc41.aarch64 57/153 Installing : systemd-libs-255.5-1.fc41.aarch64 58/153 Installing : libcom_err-1.47.0-5.fc40.aarch64 59/153 Installing : libsepol-3.6-3.fc40.aarch64 60/153 Installing : libsmartcols-2.40-13.fc41.aarch64 61/153 Installing : libtasn1-4.19.0-6.fc40.aarch64 62/153 Installing : libunistring-1.1-7.fc41.aarch64 63/153 Installing : libidn2-2.3.7-1.fc40.aarch64 64/153 Installing : lua-libs-5.4.6-5.fc40.aarch64 65/153 Installing : pcre2-10.43-2.fc41.aarch64 66/153 Installing : libselinux-3.6-4.fc40.aarch64 67/153 Installing : sed-4.9-1.fc40.aarch64 68/153 Installing : grep-3.11-8.fc41.aarch64 69/153 Installing : findutils-1:4.9.0-8.fc40.aarch64 70/153 Installing : xz-1:5.4.6-3.fc41.aarch64 71/153 Installing : libmount-2.40-13.fc41.aarch64 72/153 Installing : util-linux-core-2.40-13.fc41.aarch64 73/153 Installing : libsemanage-3.6-3.fc40.aarch64 74/153 Installing : shadow-utils-2:4.15.1-2.fc41.aarch64 75/153 Running scriptlet: libutempter-1.2.1-13.fc40.aarch64 76/153 Installing : libutempter-1.2.1-13.fc40.aarch64 76/153 Installing : tar-2:1.35-3.fc40.aarch64 77/153 Installing : libpsl-0.21.5-3.fc40.aarch64 78/153 Installing : zip-3.0-40.fc40.aarch64 79/153 Installing : zstd-1.5.6-1.fc41.aarch64 80/153 Installing : cyrus-sasl-lib-2.1.28-19.fc40.aarch64 81/153 Installing : gdbm-1:1.23-6.fc40.aarch64 82/153 Installing : libfdisk-2.40-13.fc41.aarch64 83/153 Installing 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Installing : authselect-libs-1.5.0-5.fc41.aarch64 116/153 Installing : gzip-1.13-1.fc40.aarch64 117/153 Installing : libarchive-3.7.4-1.fc41.aarch64 118/153 Installing : cracklib-2.9.11-5.fc40.aarch64 119/153 Installing : libpwquality-1.4.5-9.fc40.aarch64 120/153 Installing : authselect-1.5.0-5.fc41.aarch64 121/153 Installing : libnsl2-2.0.1-1.fc40.aarch64 122/153 Installing : pam-1.6.1-1.fc41.aarch64 123/153 Installing : libssh-0.10.6-6.fc41.aarch64 124/153 Installing : libevent-2.1.12-12.fc40.aarch64 125/153 Installing : openldap-2.6.7-1.fc40.aarch64 126/153 Installing : libcurl-8.7.1-1.fc41.aarch64 127/153 Installing : elfutils-libs-0.191-7.fc41.aarch64 128/153 Installing : elfutils-debuginfod-client-0.191-7.fc41.aarch64 129/153 Installing : binutils-gold-2.42.50-6.fc41.aarch64 130/153 Running scriptlet: binutils-gold-2.42.50-6.fc41.aarch64 130/153 Installing : binutils-2.42.50-6.fc41.aarch64 131/153 Running scriptlet: binutils-2.42.50-6.fc41.aarch64 131/153 Installing : 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rpm-build-4.19.1.1-1.fc40.aarch64 149/153 Installing : pyproject-srpm-macros-1.12.0-1.fc40.noarch 150/153 Installing : util-linux-2.40-13.fc41.aarch64 151/153 Running scriptlet: util-linux-2.40-13.fc41.aarch64 151/153 Installing : which-2.21-41.fc40.aarch64 152/153 Installing : info-7.1-2.fc40.aarch64 153/153 Running scriptlet: filesystem-3.18-9.fc41.aarch64 153/153 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 153/153 Running scriptlet: authselect-libs-1.5.0-5.fc41.aarch64 153/153 Running scriptlet: rpm-4.19.1.1-1.fc40.aarch64 153/153 Running scriptlet: info-7.1-2.fc40.aarch64 153/153 Installed: alternatives-1.26-3.fc40.aarch64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-1.fc41.aarch64 authselect-1.5.0-5.fc41.aarch64 authselect-libs-1.5.0-5.fc41.aarch64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.aarch64 binutils-2.42.50-6.fc41.aarch64 binutils-gold-2.42.50-6.fc41.aarch64 bzip2-1.0.8-18.fc40.aarch64 bzip2-libs-1.0.8-18.fc40.aarch64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.aarch64 coreutils-common-9.5-1.fc41.aarch64 cpio-2.15-1.fc40.aarch64 cracklib-2.9.11-5.fc40.aarch64 crypto-policies-20240320-1.git58e3d95.fc41.noarch curl-8.7.1-1.fc41.aarch64 cyrus-sasl-lib-2.1.28-19.fc40.aarch64 debugedit-5.0-15.fc41.aarch64 diffutils-3.10-5.fc40.aarch64 dwz-0.15-6.fc40.aarch64 ed-1.20.2-1.fc41.aarch64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.aarch64 elfutils-debuginfod-client-0.191-7.fc41.aarch64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.aarch64 elfutils-libs-0.191-7.fc41.aarch64 fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.9.noarch fedora-release-common-41-0.9.noarch fedora-release-identity-basic-41-0.9.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.aarch64 file-libs-5.45-5.fc41.aarch64 filesystem-3.18-9.fc41.aarch64 findutils-1:4.9.0-8.fc40.aarch64 fonts-srpm-macros-1:2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.aarch64 gdb-minimal-14.2-6.fc41.aarch64 gdbm-1:1.23-6.fc40.aarch64 gdbm-libs-1:1.23-6.fc40.aarch64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-17.fc41.aarch64 glibc-common-2.39.9000-17.fc41.aarch64 glibc-gconv-extra-2.39.9000-17.fc41.aarch64 glibc-minimal-langpack-2.39.9000-17.fc41.aarch64 gmp-1:6.3.0-1.fc41.aarch64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-8.fc41.aarch64 gzip-1.13-1.fc40.aarch64 info-7.1-2.fc40.aarch64 jansson-2.13.1-9.fc40.aarch64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.aarch64 krb5-libs-1.21.2-5.fc40.aarch64 libacl-2.3.2-1.fc40.aarch64 libarchive-3.7.4-1.fc41.aarch64 libattr-2.5.2-3.fc40.aarch64 libblkid-2.40-13.fc41.aarch64 libbrotli-1.1.0-3.fc40.aarch64 libcap-2.69-8.fc41.aarch64 libcap-ng-0.8.5-1.fc41.aarch64 libcom_err-1.47.0-5.fc40.aarch64 libcurl-8.7.1-1.fc41.aarch64 libeconf-0.6.2-1.fc41.aarch64 libevent-2.1.12-12.fc40.aarch64 libfdisk-2.40-13.fc41.aarch64 libffi-3.4.6-1.fc41.aarch64 libgcc-14.0.1-0.16.fc41.aarch64 libgomp-14.0.1-0.16.fc41.aarch64 libidn2-2.3.7-1.fc40.aarch64 libmount-2.40-13.fc41.aarch64 libnghttp2-1.61.0-1.fc41.aarch64 libnsl2-2.0.1-1.fc40.aarch64 libpkgconf-2.1.0-1.fc40.aarch64 libpsl-0.21.5-3.fc40.aarch64 libpwquality-1.4.5-9.fc40.aarch64 libselinux-3.6-4.fc40.aarch64 libsemanage-3.6-3.fc40.aarch64 libsepol-3.6-3.fc40.aarch64 libsmartcols-2.40-13.fc41.aarch64 libssh-0.10.6-6.fc41.aarch64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.16.fc41.aarch64 libtasn1-4.19.0-6.fc40.aarch64 libtirpc-1.3.4-1.rc3.fc41.aarch64 libtool-ltdl-2.4.7-10.fc40.aarch64 libunistring-1.1-7.fc41.aarch64 libutempter-1.2.1-13.fc40.aarch64 libuuid-2.40-13.fc41.aarch64 libverto-0.3.2-8.fc40.aarch64 libxcrypt-4.4.36-5.fc40.aarch64 libxml2-2.12.6-1.fc41.aarch64 libzstd-1.5.6-1.fc41.aarch64 lua-libs-5.4.6-5.fc40.aarch64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.aarch64 mpfr-4.2.1-3.fc40.aarch64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.aarch64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.aarch64 openssl-libs-1:3.2.1-6.fc41.aarch64 p11-kit-0.25.3-4.fc40.aarch64 p11-kit-trust-0.25.3-4.fc40.aarch64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-1.fc41.aarch64 pam-libs-1.6.1-1.fc41.aarch64 patch-2.7.6-24.fc40.aarch64 pcre2-10.43-2.fc41.aarch64 pcre2-syntax-10.43-2.fc41.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.aarch64 pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.aarch64 popt-1.19-6.fc40.aarch64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.0-1.fc41.noarch readline-8.2-8.fc40.aarch64 redhat-rpm-config-288-1.fc41.noarch rpm-4.19.1.1-1.fc40.aarch64 rpm-build-4.19.1.1-1.fc40.aarch64 rpm-build-libs-4.19.1.1-1.fc40.aarch64 rpm-libs-4.19.1.1-1.fc40.aarch64 rpm-sequoia-1.6.0-2.fc40.aarch64 rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.aarch64 setup-2.14.5-2.fc40.noarch shadow-utils-2:4.15.1-2.fc41.aarch64 sqlite-libs-3.45.3-1.fc41.aarch64 systemd-libs-255.5-1.fc41.aarch64 tar-2:1.35-3.fc40.aarch64 unzip-6.0-63.fc40.aarch64 util-linux-2.40-13.fc41.aarch64 util-linux-core-2.40-13.fc41.aarch64 which-2.21-41.fc40.aarch64 xxhash-libs-0.8.2-2.fc40.aarch64 xz-1:5.4.6-3.fc41.aarch64 xz-libs-1:5.4.6-3.fc41.aarch64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.aarch64 zlib-ng-compat-2.1.6-2.fc40.aarch64 zstd-1.5.6-1.fc41.aarch64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-3.fc40.aarch64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-1.fc41.aarch64 authselect-1.5.0-5.fc41.aarch64 authselect-libs-1.5.0-5.fc41.aarch64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.aarch64 binutils-2.42.50-6.fc41.aarch64 binutils-gold-2.42.50-6.fc41.aarch64 bzip2-1.0.8-18.fc40.aarch64 bzip2-libs-1.0.8-18.fc40.aarch64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.aarch64 coreutils-common-9.5-1.fc41.aarch64 cpio-2.15-1.fc40.aarch64 cracklib-2.9.11-5.fc40.aarch64 crypto-policies-20240320-1.git58e3d95.fc41.noarch curl-8.7.1-1.fc41.aarch64 cyrus-sasl-lib-2.1.28-19.fc40.aarch64 debugedit-5.0-15.fc41.aarch64 diffutils-3.10-5.fc40.aarch64 dwz-0.15-6.fc40.aarch64 ed-1.20.2-1.fc41.aarch64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.aarch64 elfutils-debuginfod-client-0.191-7.fc41.aarch64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.aarch64 elfutils-libs-0.191-7.fc41.aarch64 fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.9.noarch fedora-release-common-41-0.9.noarch fedora-release-identity-basic-41-0.9.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.aarch64 file-libs-5.45-5.fc41.aarch64 filesystem-3.18-9.fc41.aarch64 findutils-4.9.0-8.fc40.aarch64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.aarch64 gdb-minimal-14.2-6.fc41.aarch64 gdbm-1.23-6.fc40.aarch64 gdbm-libs-1.23-6.fc40.aarch64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-17.fc41.aarch64 glibc-common-2.39.9000-17.fc41.aarch64 glibc-gconv-extra-2.39.9000-17.fc41.aarch64 glibc-minimal-langpack-2.39.9000-17.fc41.aarch64 gmp-6.3.0-1.fc41.aarch64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-8.fc41.aarch64 gzip-1.13-1.fc40.aarch64 info-7.1-2.fc40.aarch64 jansson-2.13.1-9.fc40.aarch64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.aarch64 krb5-libs-1.21.2-5.fc40.aarch64 libacl-2.3.2-1.fc40.aarch64 libarchive-3.7.4-1.fc41.aarch64 libattr-2.5.2-3.fc40.aarch64 libblkid-2.40-13.fc41.aarch64 libbrotli-1.1.0-3.fc40.aarch64 libcap-2.69-8.fc41.aarch64 libcap-ng-0.8.5-1.fc41.aarch64 libcom_err-1.47.0-5.fc40.aarch64 libcurl-8.7.1-1.fc41.aarch64 libeconf-0.6.2-1.fc41.aarch64 libevent-2.1.12-12.fc40.aarch64 libfdisk-2.40-13.fc41.aarch64 libffi-3.4.6-1.fc41.aarch64 libgcc-14.0.1-0.16.fc41.aarch64 libgomp-14.0.1-0.16.fc41.aarch64 libidn2-2.3.7-1.fc40.aarch64 libmount-2.40-13.fc41.aarch64 libnghttp2-1.61.0-1.fc41.aarch64 libnsl2-2.0.1-1.fc40.aarch64 libpkgconf-2.1.0-1.fc40.aarch64 libpsl-0.21.5-3.fc40.aarch64 libpwquality-1.4.5-9.fc40.aarch64 libselinux-3.6-4.fc40.aarch64 libsemanage-3.6-3.fc40.aarch64 libsepol-3.6-3.fc40.aarch64 libsmartcols-2.40-13.fc41.aarch64 libssh-0.10.6-6.fc41.aarch64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.16.fc41.aarch64 libtasn1-4.19.0-6.fc40.aarch64 libtirpc-1.3.4-1.rc3.fc41.aarch64 libtool-ltdl-2.4.7-10.fc40.aarch64 libunistring-1.1-7.fc41.aarch64 libutempter-1.2.1-13.fc40.aarch64 libuuid-2.40-13.fc41.aarch64 libverto-0.3.2-8.fc40.aarch64 libxcrypt-4.4.36-5.fc40.aarch64 libxml2-2.12.6-1.fc41.aarch64 libzstd-1.5.6-1.fc41.aarch64 lua-libs-5.4.6-5.fc40.aarch64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.aarch64 mpfr-4.2.1-3.fc40.aarch64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.aarch64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.aarch64 openssl-libs-3.2.1-6.fc41.aarch64 p11-kit-0.25.3-4.fc40.aarch64 p11-kit-trust-0.25.3-4.fc40.aarch64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-1.fc41.aarch64 pam-libs-1.6.1-1.fc41.aarch64 patch-2.7.6-24.fc40.aarch64 pcre2-10.43-2.fc41.aarch64 pcre2-syntax-10.43-2.fc41.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.aarch64 pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.aarch64 popt-1.19-6.fc40.aarch64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.0-1.fc41.noarch readline-8.2-8.fc40.aarch64 redhat-rpm-config-288-1.fc41.noarch rpm-4.19.1.1-1.fc40.aarch64 rpm-build-4.19.1.1-1.fc40.aarch64 rpm-build-libs-4.19.1.1-1.fc40.aarch64 rpm-libs-4.19.1.1-1.fc40.aarch64 rpm-sequoia-1.6.0-2.fc40.aarch64 rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.aarch64 setup-2.14.5-2.fc40.noarch shadow-utils-4.15.1-2.fc41.aarch64 sqlite-libs-3.45.3-1.fc41.aarch64 systemd-libs-255.5-1.fc41.aarch64 tar-1.35-3.fc40.aarch64 unzip-6.0-63.fc40.aarch64 util-linux-2.40-13.fc41.aarch64 util-linux-core-2.40-13.fc41.aarch64 which-2.21-41.fc40.aarch64 xxhash-libs-0.8.2-2.fc40.aarch64 xz-5.4.6-3.fc41.aarch64 xz-libs-5.4.6-3.fc41.aarch64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.aarch64 zlib-ng-compat-2.1.6-2.fc40.aarch64 zstd-1.5.6-1.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1713916800 Wrote: /builddir/build/SRPMS/morphio-3.3.9-2.fc41.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-39-aarch64-1714927377.127991/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-aarch64-1714927377.127991/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-aarch64-1714927377.127991/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-aarch64-1714927377.127991/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-xngf6kq4/morphio/morphio.spec) Config(child) 2 minutes 1 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/morphio-3.3.9-2.fc41.src.rpm) Config(fedora-39-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-aarch64-bootstrap-1714927377.127991/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-aarch64-bootstrap-1714927377.127991/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-aarch64-1714927377.127991/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.aarch64 rpm-sequoia-1.6.0-1.fc39.aarch64 python3-dnf-4.19.2-1.fc41.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch yum-4.19.2-1.fc41.noarch Finish: chroot init Start: build phase for morphio-3.3.9-2.fc41.src.rpm Start: build setup for morphio-3.3.9-2.fc41.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1713916800 Wrote: /builddir/build/SRPMS/morphio-3.3.9-2.fc41.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 68 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 83 kB/s | 3.8 kB 00:00 fedora 50 kB/s | 13 kB 00:00 updates 48 kB/s | 12 kB 00:00 Dependencies resolved. =============================================================================================================================================== Package Arch Version Repository Size =============================================================================================================================================== Installing: boost-devel aarch64 1.83.0-3.fc40 copr_base 12 M catch2-devel aarch64 2.13.10-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 197 k cmake aarch64 3.28.3-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.7 M gcc-c++ aarch64 14.0.1-0.16.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 M gsl-lite-devel aarch64 0.41.0-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 62 k gulrak-filesystem-devel aarch64 1.5.14-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 60 k hdf5-devel aarch64 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=============================================================================================================================================== Install 285 Packages Total download size: 186 M Installed size: 834 M Downloading Packages: (1/285): boost-atomic-1.83.0-3.fc40.aarch64.rpm 895 kB/s | 20 kB 00:00 (2/285): boost-1.83.0-3.fc40.aarch64.rpm 621 kB/s | 15 kB 00:00 (3/285): boost-chrono-1.83.0-3.fc40.aarch64.rpm 1.1 MB/s | 26 kB 00:00 (4/285): boost-contract-1.83.0-3.fc40.aarch64.r 13 MB/s | 44 kB 00:00 (5/285): boost-container-1.83.0-3.fc40.aarch64. 5.4 MB/s | 40 kB 00:00 (6/285): boost-context-1.83.0-3.fc40.aarch64.rp 2.5 MB/s | 18 kB 00:00 (7/285): boost-coroutine-1.83.0-3.fc40.aarch64. 3.7 MB/s | 21 kB 00:00 (8/285): boost-date-time-1.83.0-3.fc40.aarch64. 2.3 MB/s | 16 kB 00:00 (9/285): boost-fiber-1.83.0-3.fc40.aarch64.rpm 7.0 MB/s | 43 kB 00:00 (10/285): boost-filesystem-1.83.0-3.fc40.aarch6 9.0 MB/s | 65 kB 00:00 (11/285): boost-graph-1.83.0-3.fc40.aarch64.rpm 17 MB/s | 143 kB 00:00 (12/285): boost-iostreams-1.83.0-3.fc40.aarch64 5.8 MB/s | 41 kB 00:00 (13/285): boost-json-1.83.0-3.fc40.aarch64.rpm 20 MB/s | 142 kB 00:00 (14/285): boost-locale-1.83.0-3.fc40.aarch64.rp 45 MB/s | 201 kB 00:00 (15/285): boost-math-1.83.0-3.fc40.aarch64.rpm 32 MB/s | 260 kB 00:00 (16/285): boost-log-1.83.0-3.fc40.aarch64.rpm 41 MB/s | 459 kB 00:00 (17/285): boost-nowide-1.83.0-3.fc40.aarch64.rp 4.1 MB/s | 21 kB 00:00 (18/285): boost-numpy3-1.83.0-3.fc40.aarch64.rp 5.5 MB/s | 29 kB 00:00 (19/285): boost-program-options-1.83.0-3.fc40.a 14 MB/s | 105 kB 00:00 (20/285): boost-python3-1.83.0-3.fc40.aarch64.r 11 MB/s | 90 kB 00:00 (21/285): boost-random-1.83.0-3.fc40.aarch64.rp 3.8 MB/s | 25 kB 00:00 (22/285): boost-regex-1.83.0-3.fc40.aarch64.rpm 9.5 MB/s | 109 kB 00:00 (23/285): boost-serialization-1.83.0-3.fc40.aar 16 MB/s | 131 kB 00:00 (24/285): boost-stacktrace-1.83.0-3.fc40.aarch6 4.7 MB/s | 30 kB 00:00 (25/285): boost-devel-1.83.0-3.fc40.aarch64.rpm 146 MB/s | 12 MB 00:00 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python3-idna-3.7-1.fc41.noarch.rpm 5.5 MB/s | 110 kB 00:00 (267/285): python3-iniconfig-1.1.1-16.fc40.noar 903 kB/s | 18 kB 00:00 (268/285): python3-packaging-24.0-1.fc41.noarch 5.4 MB/s | 116 kB 00:00 (269/285): python3-pluggy-1.3.0-3.fc40.noarch.r 2.4 MB/s | 49 kB 00:00 (270/285): python3-requests-2.31.0-4.fc41.noarc 6.4 MB/s | 141 kB 00:00 (271/285): python3-rpm-generators-14-10.fc40.no 1.4 MB/s | 30 kB 00:00 (272/285): python3-rpm-macros-3.12-9.fc41.noarc 665 kB/s | 13 kB 00:00 (273/285): python3-setuptools-69.2.0-1.fc41.noa 42 MB/s | 1.4 MB 00:00 (274/285): python3-libs-3.12.3-2.fc41.aarch64.r 87 MB/s | 8.8 MB 00:00 (275/285): python3-setuptools_scm-8.0.4-3.fc40. 3.9 MB/s | 98 kB 00:00 (276/285): python3-six-1.16.0-14.fc40.noarch.rp 1.8 MB/s | 41 kB 00:00 (277/285): python3-typing-extensions-4.11.0-1.f 5.1 MB/s | 81 kB 00:00 (278/285): python3-urllib3-1.26.18-3.fc40.noarc 12 MB/s | 254 kB 00:00 (279/285): rav1e-libs-0.7.1-1.fc40.aarch64.rpm 31 MB/s | 798 kB 00:00 (280/285): rhash-1.4.4-1.fc41.aarch64.rpm 6.7 MB/s | 196 kB 00:00 (281/285): svt-av1-libs-1.4.1-5.fc40.aarch64.rp 40 MB/s | 1.1 MB 00:00 (282/285): tzdata-2024a-5.fc41.noarch.rpm 19 MB/s | 431 kB 00:00 (283/285): xml-common-0.6.3-63.fc40.noarch.rpm 2.1 MB/s | 31 kB 00:00 (284/285): vim-filesystem-9.1.354-1.fc41.noarch 891 kB/s | 17 kB 00:00 (285/285): zlib-ng-compat-devel-2.1.6-2.fc40.aa 1.8 MB/s | 36 kB 00:00 -------------------------------------------------------------------------------- Total 75 MB/s | 186 MB 00:02 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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annobin-plugin-gcc-12.52-1.fc41.aarch64 270/285 Installing : hdf5-devel-1.12.1-15.fc40.aarch64 271/285 Installing : pybind11-devel-2.12.0-1.fc41.aarch64 272/285 Installing : gcc-c++-14.0.1-0.16.fc41.aarch64 273/285 Installing : gcc-plugin-annobin-14.0.1-0.16.fc41.aarch64 274/285 Running scriptlet: gcc-plugin-annobin-14.0.1-0.16.fc41.aarch64 274/285 Installing : python3-setuptools_scm-8.0.4-3.fc40.noarch 275/285 Installing : python3-h5py-3.11.0-1.fc41.aarch64 276/285 Installing : python3-pytest-7.4.3-5.fc41.noarch 277/285 Installing : python3-requests-2.31.0-4.fc41.noarch 278/285 Installing : python3-devel-3.12.3-2.fc41.aarch64 279/285 Installing : ninja-build-1.11.1-7.fc40.aarch64 280/285 Installing : catch2-devel-2.13.10-4.fc40.aarch64 281/285 Installing : gsl-lite-devel-0.41.0-2.fc39.aarch64 282/285 Installing : gulrak-filesystem-devel-1.5.14-6.fc40.aarch64 283/285 Installing : highfive-devel-2.9.0-3.fc41.aarch64 284/285 Installing : lexertl14-devel-0.1.0^20240301git3097246-1.fc41. 285/285 Running scriptlet: fontconfig-2.15.0-4.fc40.aarch64 285/285 Running scriptlet: lexertl14-devel-0.1.0^20240301git3097246-1.fc41. 285/285 Installed: abattis-cantarell-vf-fonts-0.301-12.fc40.noarch annobin-docs-12.52-1.fc41.noarch annobin-plugin-gcc-12.52-1.fc41.aarch64 boost-1.83.0-3.fc40.aarch64 boost-atomic-1.83.0-3.fc40.aarch64 boost-chrono-1.83.0-3.fc40.aarch64 boost-container-1.83.0-3.fc40.aarch64 boost-context-1.83.0-3.fc40.aarch64 boost-contract-1.83.0-3.fc40.aarch64 boost-coroutine-1.83.0-3.fc40.aarch64 boost-date-time-1.83.0-3.fc40.aarch64 boost-devel-1.83.0-3.fc40.aarch64 boost-fiber-1.83.0-3.fc40.aarch64 boost-filesystem-1.83.0-3.fc40.aarch64 boost-graph-1.83.0-3.fc40.aarch64 boost-iostreams-1.83.0-3.fc40.aarch64 boost-json-1.83.0-3.fc40.aarch64 boost-locale-1.83.0-3.fc40.aarch64 boost-log-1.83.0-3.fc40.aarch64 boost-math-1.83.0-3.fc40.aarch64 boost-nowide-1.83.0-3.fc40.aarch64 boost-numpy3-1.83.0-3.fc40.aarch64 boost-program-options-1.83.0-3.fc40.aarch64 boost-python3-1.83.0-3.fc40.aarch64 boost-random-1.83.0-3.fc40.aarch64 boost-regex-1.83.0-3.fc40.aarch64 boost-serialization-1.83.0-3.fc40.aarch64 boost-stacktrace-1.83.0-3.fc40.aarch64 boost-system-1.83.0-3.fc40.aarch64 boost-test-1.83.0-3.fc40.aarch64 boost-thread-1.83.0-3.fc40.aarch64 boost-timer-1.83.0-3.fc40.aarch64 boost-type_erasure-1.83.0-3.fc40.aarch64 boost-wave-1.83.0-3.fc40.aarch64 cairo-1.18.0-3.fc40.aarch64 catch2-devel-2.13.10-4.fc40.aarch64 cmake-3.28.3-4.fc41.aarch64 cmake-data-3.28.3-4.fc41.noarch cmake-filesystem-3.28.3-4.fc41.aarch64 cmake-rpm-macros-3.28.3-4.fc41.noarch cpp-14.0.1-0.16.fc41.aarch64 default-fonts-core-sans-4.0-13.fc41.noarch emacs-filesystem-1:30.0-2.fc41.noarch expat-2.6.2-1.fc41.aarch64 flexiblas-3.4.2-1.fc41.aarch64 flexiblas-netlib-3.4.2-1.fc41.aarch64 flexiblas-openblas-openmp-3.4.2-1.fc41.aarch64 fontconfig-2.15.0-4.fc40.aarch64 fonts-filesystem-1:2.0.5-14.fc40.noarch freetype-2.13.2-5.fc40.aarch64 gc-8.2.2-6.fc40.aarch64 gcc-14.0.1-0.16.fc41.aarch64 gcc-c++-14.0.1-0.16.fc41.aarch64 gcc-gfortran-14.0.1-0.16.fc41.aarch64 gcc-plugin-annobin-14.0.1-0.16.fc41.aarch64 gd-2.3.3-16.fc41.aarch64 glib2-2.80.0-1.fc41.aarch64 glibc-devel-2.39.9000-17.fc41.aarch64 gnutls-3.8.5-1.fc41.aarch64 google-noto-fonts-common-20240401-1.fc41.noarch google-noto-sans-vf-fonts-20240401-1.fc41.noarch graphite2-1.3.14-15.fc40.aarch64 groff-base-1.23.0-6.fc40.aarch64 gsl-lite-devel-0.41.0-2.fc39.aarch64 guile30-3.0.7-12.fc40.aarch64 gulrak-filesystem-devel-1.5.14-6.fc40.aarch64 harfbuzz-8.4.0-1.fc41.aarch64 hdf5-1.12.1-15.fc40.aarch64 hdf5-devel-1.12.1-15.fc40.aarch64 highfive-devel-2.9.0-3.fc41.aarch64 jbigkit-libs-2.1-29.fc40.aarch64 jsoncpp-1.9.5-7.fc40.aarch64 kernel-headers-6.9.0-0.rc6.51.fc41.aarch64 lcov-2.0-3.fc40.noarch lexertl14-devel-0.1.0^20240301git3097246-1.fc41.aarch64 libX11-1.8.9-1.fc41.aarch64 libX11-common-1.8.9-1.fc41.noarch libXau-1.0.11-6.fc40.aarch64 libXext-1.3.6-1.fc40.aarch64 libXpm-3.5.17-3.fc40.aarch64 libXrender-0.9.11-6.fc40.aarch64 libaec-1.1.2-1.fc40.aarch64 libaec-devel-1.1.2-1.fc40.aarch64 libaom-3.8.2-2.fc41.aarch64 libasan-14.0.1-0.16.fc41.aarch64 libatomic-14.0.1-0.16.fc41.aarch64 libavif-1.0.4-2.fc41.aarch64 libb2-0.98.1-11.fc40.aarch64 libdav1d-1.4.0-1.fc41.aarch64 libgfortran-14.0.1-0.16.fc41.aarch64 libicu-74.2-1.fc40.aarch64 libicu-devel-74.2-1.fc40.aarch64 libimagequant-4.0.3-3.fc40.aarch64 libjpeg-turbo-3.0.2-2.fc41.aarch64 liblerc-4.0.0-6.fc40.aarch64 liblzf-3.6-28.fc40.aarch64 libmpc-1.3.1-5.fc40.aarch64 libpng-2:1.6.40-3.fc40.aarch64 libstdc++-devel-14.0.1-0.16.fc41.aarch64 libtiff-4.6.0-2.fc40.aarch64 libubsan-14.0.1-0.16.fc41.aarch64 libuv-1:1.48.0-1.fc40.aarch64 libwebp-1.4.0-1.fc41.aarch64 libxcb-1.17.0-1.fc41.aarch64 libxcrypt-devel-4.4.36-5.fc40.aarch64 mailcap-2.1.54-5.fc40.noarch make-1:4.4.1-6.fc40.aarch64 mpdecimal-2.5.1-9.fc40.aarch64 ncurses-6.4-12.20240127.fc40.aarch64 nettle-3.9.1-6.fc40.aarch64 ninja-build-1.11.1-7.fc40.aarch64 openblas-0.3.26-4.fc40.aarch64 openblas-openmp-0.3.26-4.fc40.aarch64 perl-AutoLoader-5.74-507.fc41.noarch perl-B-1.88-507.fc41.aarch64 perl-B-Hooks-EndOfScope-0.28-1.fc41.noarch perl-Capture-Tiny-0.48-20.fc40.noarch perl-Carp-1.54-502.fc40.noarch perl-Class-Data-Inheritable-0.09-8.fc40.noarch perl-Class-Inspector-1.36-16.fc40.noarch perl-Class-Method-Modifiers-2.15-4.fc40.noarch perl-Class-Singleton-1.6-11.fc40.noarch perl-Class-Struct-0.68-507.fc41.noarch perl-Clone-0.46-6.fc40.aarch64 perl-Compress-Raw-Bzip2-2.212-1.fc41.aarch64 perl-Compress-Raw-Zlib-2.212-1.fc41.aarch64 perl-Data-Dumper-2.188-503.fc40.aarch64 perl-Data-OptList-0.114-4.fc40.noarch perl-Date-ISO8601-0.005-20.fc40.noarch perl-DateTime-2:1.65-3.fc40.aarch64 perl-DateTime-Locale-1.42-1.fc41.noarch perl-DateTime-TimeZone-2.62-1.fc40.noarch perl-DateTime-TimeZone-SystemV-0.010-21.fc40.noarch perl-DateTime-TimeZone-Tzfile-0.011-21.fc40.noarch perl-Devel-CallChecker-0.009-5.fc40.aarch64 perl-Devel-Caller-2.07-5.fc40.aarch64 perl-Devel-LexAlias-0.05-36.fc40.aarch64 perl-Devel-StackTrace-1:2.05-3.fc40.noarch perl-Digest-1.20-502.fc40.noarch perl-Digest-MD5-2.59-3.fc40.aarch64 perl-Dist-CheckConflicts-0.11-30.fc40.noarch perl-DynaLoader-1.54-507.fc41.aarch64 perl-DynaLoader-Functions-0.004-4.fc40.noarch perl-Encode-4:3.21-505.fc41.aarch64 perl-Encode-Locale-1.05-29.fc40.noarch perl-English-1.11-507.fc41.noarch perl-Errno-1.37-507.fc41.aarch64 perl-Eval-Closure-0.14-23.fc40.noarch perl-Exception-Class-1.45-10.fc40.noarch perl-Exporter-5.78-3.fc40.noarch perl-Fcntl-1.15-507.fc41.aarch64 perl-File-Basename-2.86-507.fc41.noarch perl-File-Compare-1.100.700-507.fc41.noarch perl-File-Copy-2.41-507.fc41.noarch perl-File-Find-1.43-507.fc41.noarch perl-File-Path-2.18-503.fc40.noarch perl-File-ShareDir-1.118-11.fc40.noarch perl-File-Temp-1:0.231.100-503.fc40.noarch perl-File-stat-1.13-507.fc41.noarch perl-FileHandle-2.05-507.fc41.noarch perl-GD-2.80-1.fc41.aarch64 perl-Getopt-Long-1:2.57-3.fc40.noarch perl-Getopt-Std-1.13-507.fc41.noarch perl-HTML-Parser-3.82-1.fc41.aarch64 perl-HTML-Tagset-3.24-1.fc41.noarch perl-HTTP-Date-6.06-4.fc40.noarch perl-HTTP-Message-6.45-3.fc40.noarch perl-HTTP-Tiny-0.088-5.fc40.noarch perl-Hash-Util-FieldHash-1.26-507.fc41.aarch64 perl-I18N-LangTags-0.45-507.fc41.noarch perl-I18N-Langinfo-0.22-507.fc41.aarch64 perl-IO-1.52-507.fc41.aarch64 perl-IO-Compress-2.212-1.fc41.noarch perl-IO-HTML-1.004-12.fc40.noarch perl-IO-Socket-IP-0.42-2.fc40.noarch perl-IO-Socket-SSL-2.085-1.fc40.noarch perl-IPC-Open3-1.22-507.fc41.noarch perl-JSON-4.10-5.fc40.noarch perl-JSON-XS-1:4.03-13.fc40.aarch64 perl-LWP-MediaTypes-6.04-18.fc41.noarch perl-Locale-Maketext-1.33-503.fc40.noarch perl-Locale-Maketext-Simple-1:0.21-507.fc41.noarch perl-MIME-Base64-3.16-503.fc40.aarch64 perl-MRO-Compat-0.15-9.fc40.noarch perl-Math-BigInt-1:2.0030.02-3.fc40.noarch perl-Math-Complex-1.62-507.fc41.noarch perl-Module-CoreList-1:5.20240420-1.fc41.noarch perl-Module-Implementation-0.09-39.fc40.noarch perl-Module-Load-1:0.36-503.fc40.noarch perl-Module-Load-Conditional-0.74-503.fc40.noarch perl-Module-Metadata-1.000038-5.fc40.noarch perl-Module-Runtime-0.016-22.fc40.noarch perl-Mozilla-CA-20240313-1.fc41.noarch perl-Net-SSLeay-1.94-3.fc40.aarch64 perl-POSIX-2.13-507.fc41.aarch64 perl-Package-Generator-1.106-31.fc40.noarch perl-Package-Stash-0.40-7.fc40.noarch perl-Package-Stash-XS-0.30-7.fc40.aarch64 perl-PadWalker-2.5-13.fc40.aarch64 perl-Params-Check-1:0.38-502.fc40.noarch perl-Params-Classify-0.015-22.fc40.aarch64 perl-Params-Util-1.102-14.fc40.aarch64 perl-Params-ValidationCompiler-0.31-5.fc40.noarch perl-PathTools-3.89-502.fc40.aarch64 perl-Pod-Escapes-1:1.07-503.fc40.noarch perl-Pod-Html-1.34-507.fc41.noarch perl-Pod-Perldoc-3.28.01-503.fc40.noarch perl-Pod-Simple-1:3.45-6.fc40.noarch perl-Pod-Usage-4:2.03-503.fc40.noarch perl-Ref-Util-0.204-20.fc40.noarch perl-Ref-Util-XS-0.117-22.fc40.aarch64 perl-Role-Tiny-2.002004-11.fc40.noarch perl-Scalar-List-Utils-5:1.63-503.fc40.aarch64 perl-SelectSaver-1.02-507.fc41.noarch perl-Socket-4:2.038-1.fc41.aarch64 perl-Specio-0.48-6.fc40.noarch perl-Storable-1:3.32-502.fc40.aarch64 perl-Sub-Exporter-0.991-3.fc40.noarch perl-Sub-Exporter-Progressive-0.001013-24.fc40.noarch perl-Sub-Identify-0.14-26.fc40.aarch64 perl-Sub-Install-0.929-5.fc40.noarch perl-Symbol-1.09-507.fc41.noarch perl-Term-ANSIColor-5.01-504.fc40.noarch perl-Term-Cap-1.18-503.fc40.noarch perl-Text-ParseWords-3.31-502.fc40.noarch perl-Text-Tabs+Wrap-2024.001-1.fc41.noarch perl-Time-HiRes-4:1.9775-502.fc40.aarch64 perl-Time-Local-2:1.350-5.fc40.noarch perl-TimeDate-1:2.33-14.fc40.noarch perl-Try-Tiny-0.31-9.fc40.noarch perl-Types-Serialiser-1.01-11.fc40.noarch perl-URI-5.28-1.fc41.noarch perl-Variable-Magic-0.64-1.fc41.aarch64 perl-XString-0.005-12.fc40.aarch64 perl-base-2.27-507.fc41.noarch perl-common-sense-3.7.5-17.fc40.aarch64 perl-constant-1.33-503.fc40.noarch perl-if-0.61.000-507.fc41.noarch perl-interpreter-4:5.38.2-507.fc41.aarch64 perl-lib-0.65-507.fc41.aarch64 perl-libnet-3.15-503.fc40.noarch perl-libs-4:5.38.2-507.fc41.aarch64 perl-locale-1.10-507.fc41.noarch perl-mro-1.28-507.fc41.aarch64 perl-namespace-autoclean-0.29-18.fc40.noarch perl-namespace-clean-0.27-26.fc40.noarch perl-overload-1.37-507.fc41.noarch perl-overloading-0.02-507.fc41.noarch perl-parent-1:0.241-502.fc40.noarch perl-podlators-1:5.01-502.fc40.noarch perl-vars-1.05-507.fc41.noarch perl-version-8:0.99.32-1.fc41.aarch64 perltidy-20240202-1.fc40.noarch pixman-0.43.4-1.fc41.aarch64 pybind11-devel-2.12.0-1.fc41.aarch64 pyproject-rpm-macros-1.12.0-1.fc40.noarch python-pip-wheel-24.0-2.fc41.noarch python-rpm-macros-3.12-9.fc41.noarch python3-3.12.3-2.fc41.aarch64 python3-cached_property-1.5.2-13.fc40.noarch python3-charset-normalizer-3.3.2-3.fc40.noarch python3-devel-3.12.3-2.fc41.aarch64 python3-h5py-3.11.0-1.fc41.aarch64 python3-idna-3.7-1.fc41.noarch python3-iniconfig-1.1.1-16.fc40.noarch python3-libs-3.12.3-2.fc41.aarch64 python3-numpy-1:1.26.4-3.fc41.aarch64 python3-packaging-24.0-1.fc41.noarch python3-pluggy-1.3.0-3.fc40.noarch python3-pytest-7.4.3-5.fc41.noarch python3-requests-2.31.0-4.fc41.noarch python3-rpm-generators-14-10.fc40.noarch python3-rpm-macros-3.12-9.fc41.noarch python3-setuptools-69.2.0-1.fc41.noarch python3-setuptools_scm-8.0.4-3.fc40.noarch python3-six-1.16.0-14.fc40.noarch python3-typing-extensions-4.11.0-1.fc41.noarch python3-urllib3-1.26.18-3.fc40.noarch rav1e-libs-0.7.1-1.fc40.aarch64 rhash-1.4.4-1.fc41.aarch64 svt-av1-libs-1.4.1-5.fc40.aarch64 tzdata-2024a-5.fc41.noarch vim-filesystem-2:9.1.354-1.fc41.noarch xml-common-0.6.3-63.fc40.noarch zlib-ng-compat-devel-2.1.6-2.fc40.aarch64 Complete! Finish: build setup for morphio-3.3.9-2.fc41.src.rpm Start: rpmbuild morphio-3.3.9-2.fc41.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1713916800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.5s2vLY + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf MorphIO-3.3.9 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/MorphIO-3.3.9.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd MorphIO-3.3.9 + rm -rf /builddir/build/BUILD/MorphIO-3.3.9-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/MorphIO-3.3.9-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/stop-them-using-a-random-env-var.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/remove-upstreams-flags.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/install-python-shared-object.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/stop-setup.py-from-cmake-build.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pytest-float32.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/use-lib_install_dir.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/allow_use_of_external_ghc_filesystem.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/dont_use_cmake_for_finding_ghc_filesystem.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + rm -rvf 3rdparty/GSL_LITE removed directory '3rdparty/GSL_LITE' + sed -r -i /GSL_LITE/d MANIFEST.in + sed -r -i '/director.*\(.*(gsl-lite|GSL_LITE).*\)/d' 3rdparty/CMakeLists.txt + sed -r -i -e /TARGET_PROPERTY:gsl-lite,INTERFACE_INCLUDE_DIRECTORIES/d -e 's/PUBLIC[[:blank:]]+gsl-lite[[:blank:]]+(PRIVATE)/\1/' src/CMakeLists.txt + grep -ErIl '#[[:blank:]]*include[[:blank:]]+["<]gsl/gsl[">]' . + xargs -r sed -r -i 's@(#[[:blank:]]*include[[:blank:]]+["<]gsl/gsl)([">])@\1-lite\.hpp\2@' + rm -rvf 3rdparty/lexertl + ln -s /usr/include/lexertl 3rdparty/ + find . -type f -name .gitignore -print -delete ./doc/source/doxygen/.gitignore ./.gitignore + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.aeVYhJ + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.3.9 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DEXTERNAL_PYBIND11:BOOL=TRUE -DEXTERNAL_HIGHFIVE:BOOL=TRUE -DEXTERNAL_GHC_FILESYSTEM:BOOL=TRUE -DMORPHIO_USE_DOUBLE:BOOL=TRUE -DBUILD_BINDINGS:BOOL=TRUE -DMorphIO_CXX_WARNINGS:BOOL=FALSE -DMORPHIO_TESTS:BOOL=TRUE -DEXTERNAL_CATCH2:BOOL=TRUE -DMORPHIO_ENABLE_COVERAGE:BOOL=TRUE -DMORPHIO_USE_DOUBLE:BOOL=TRUE -DMORPHIO_VERSION_STRING:STRING=3.3.9 -GNinja -Wno-dev -- The C compiler identification is GNU 14.0.1 -- The CXX compiler identification is GNU 14.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done Floating Point Type: double -- HIGHFIVE 2.9.0: (Re)Detecting Highfive dependencies (HIGHFIVE_USE_INSTALL_DEPS=NO) -- Found HDF5: /usr/lib64/libhdf5.so (found version "1.12.1") -- Found Boost: /usr/include (found version "1.83.0") found components: system serialization -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.12.3", minimum required is "3.6") -- Found PythonLibs: /usr/lib64/libpython3.12.so -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.12.0") -- Performing Test HAVE_fprofile_abs_path -- Performing Test HAVE_fprofile_abs_path - Success CMake Warning at CMake/CodeCoverage.cmake:206 (message): Code coverage results with an optimised (non-Debug) build may be misleading Call Stack (most recent call first): src/CMakeLists.txt:84 (include) -- Warning: this does not have an effect - use NO_SYSTEM_FROM_IMPORTED if using imported targets -- Found Python3: /usr/bin/python3.12 (found version "3.12.3") found components: Interpreter CMake Warning at CMake/CodeCoverage.cmake:206 (message): Code coverage results with an optimised (non-Debug) build may be misleading Call Stack (most recent call first): tests/CMakeLists.txt:42 (include) -- Configuring done (1.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build' Run Build Command(s): /usr/bin/ninja-build -v -j 4 [1/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/enums.cpp.o -MF src/CMakeFiles/morphio_obj.dir/enums.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/enums.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/enums.cpp [2/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -MF src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/endoplasmic_reticulum.cpp [3/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o -MF src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/errorMessages.cpp [4/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o -MF src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/dendritic_spine.cpp [5/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o -MF src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/glial_cell.cpp [6/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o -MF src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/mito_section.cpp [7/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -g --coverage -fprofile-abs-path -MD -MT src/CMakeFiles/morphio_obj.dir/error_message_generation.cpp.o -MF src/CMakeFiles/morphio_obj.dir/error_message_generation.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/error_message_generation.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/src/error_message_generation.cpp [8/62] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/MorphIO-3.3.9 -I/builddir/build/BUILD/MorphIO-3.3.9/src/../include -isystem /builddir/build/BUILD/MorphIO-3.3.9/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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tests/CMakeFiles/unittests.dir/test_soma.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/tests/test_soma.cpp [57/62] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMORPHIO_USE_DOUBLE -DMPI_NO_CPPBIND -isystem /builddir/build/BUILD/MorphIO-3.3.9/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -MD -MT tests/CMakeFiles/unittests.dir/test_swc_reader.cpp.o -MF tests/CMakeFiles/unittests.dir/test_swc_reader.cpp.o.d -o tests/CMakeFiles/unittests.dir/test_swc_reader.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/tests/test_swc_reader.cpp [58/62] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMORPHIO_USE_DOUBLE -DMPI_NO_CPPBIND -isystem /builddir/build/BUILD/MorphIO-3.3.9/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -MD -MT tests/CMakeFiles/unittests.dir/test_utilities.cpp.o -MF tests/CMakeFiles/unittests.dir/test_utilities.cpp.o.d -o tests/CMakeFiles/unittests.dir/test_utilities.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/tests/test_utilities.cpp [59/62] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -flto -shared -o binds/python/_morphio.cpython-312-aarch64-linux-gnu.so binds/python/CMakeFiles/_morphio.dir/morphio.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_enums.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_immutable.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_misc.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_mutable.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_vasculature.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_warnings_exceptions.cpp.o binds/python/CMakeFiles/_morphio.dir/bindings_utils.cpp.o src/libmorphio_static.a -lgcov -lhdf5 && cd /builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build/binds/python && /usr/bin/strip /builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build/binds/python/_morphio.cpython-312-aarch64-linux-gnu.so [60/62] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMORPHIO_USE_DOUBLE -DMPI_NO_CPPBIND -isystem /builddir/build/BUILD/MorphIO-3.3.9/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -MD -MT tests/CMakeFiles/unittests.dir/test_vasculature_morphology.cpp.o -MF tests/CMakeFiles/unittests.dir/test_vasculature_morphology.cpp.o.d -o tests/CMakeFiles/unittests.dir/test_vasculature_morphology.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/tests/test_vasculature_morphology.cpp [61/62] /usr/bin/g++ -DBOOST_ALL_NO_LIB -DH5_USE_BOOST -DHIGHFIVE_HAS_CONCEPTS=0 -DMORPHIO_USE_DOUBLE -DMPI_NO_CPPBIND -isystem /builddir/build/BUILD/MorphIO-3.3.9/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -MD -MT tests/CMakeFiles/unittests.dir/main.cpp.o -MF tests/CMakeFiles/unittests.dir/main.cpp.o.d -o tests/CMakeFiles/unittests.dir/main.cpp.o -c /builddir/build/BUILD/MorphIO-3.3.9/tests/main.cpp [62/62] : && /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic tests/CMakeFiles/unittests.dir/main.cpp.o tests/CMakeFiles/unittests.dir/test_collection.cpp.o tests/CMakeFiles/unittests.dir/test_immutable_morphology.cpp.o tests/CMakeFiles/unittests.dir/test_mitochondria.cpp.o tests/CMakeFiles/unittests.dir/test_morphology_readers.cpp.o tests/CMakeFiles/unittests.dir/test_mutable_morphology.cpp.o tests/CMakeFiles/unittests.dir/test_point_utils.cpp.o tests/CMakeFiles/unittests.dir/test_properties.cpp.o tests/CMakeFiles/unittests.dir/test_soma.cpp.o tests/CMakeFiles/unittests.dir/test_swc_reader.cpp.o tests/CMakeFiles/unittests.dir/test_utilities.cpp.o tests/CMakeFiles/unittests.dir/test_vasculature_morphology.cpp.o -o /builddir/build/BUILD/MorphIO-3.3.9/bin/unittests src/libmorphio_static.a -lstdc++fs -lhdf5 -lgcov && : + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' /usr/lib/python3.12/site-packages/setuptools/__init__.py:81: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING: The wheel package is not available. WARNING setuptools_scm._integration.setuptools pyproject.toml does not contain a tool.setuptools_scm section WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' running build running build_py creating build creating build/lib creating build/lib/morphio copying morphio/__init__.py -> build/lib/morphio creating build/lib/morphio/mut copying morphio/mut/__init__.py -> build/lib/morphio/mut creating build/lib/morphio/vasculature copying morphio/vasculature/__init__.py -> build/lib/morphio/vasculature + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.XT4p4h + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 ++ dirname /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.3.9 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + DESTDIR=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "" -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/warning_handling.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/version.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vector_types.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vasc -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vasc/vasculature.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vasc/section.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vasc/properties.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/vasc/iterators.hpp -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/types.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/tools.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/soma.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/section_iterators.hpp -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/section_base.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/section.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/properties.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/writers.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/soma.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/section.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/morphology.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/modifiers.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/mitochondria.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/mito_section.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/glial_cell.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/endoplasmic_reticulum.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mut/dendritic_spine.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/morphology.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mitochondria.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/mito_section.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/glial_cell.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/exceptions.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/errorMessages.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/enums.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/endoplasmic_reticulum.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/dendritic_spine.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/include/morphio/collection.h -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/cmake/MorphIO/MorphIOTargets.cmake -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/cmake/MorphIO/MorphIOTargets-noconfig.cmake -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/cmake/MorphIO/MorphIOConfig.cmake -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/libmorphio.so.0.0.0 -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/libmorphio.so -- Installing: /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio/_morphio.cpython-312-aarch64-linux-gnu.so + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 --prefix /usr /usr/lib/python3.12/site-packages/setuptools/__init__.py:81: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING: The wheel package is not available. WARNING setuptools_scm._integration.setuptools pyproject.toml does not contain a tool.setuptools_scm section WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' running install /usr/lib/python3.12/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() running install_lib creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12 creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/vasculature copying build/lib/morphio/vasculature/__init__.py -> /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/vasculature creating /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/mut copying build/lib/morphio/mut/__init__.py -> /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/mut copying build/lib/morphio/__init__.py -> /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio byte-compiling /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/vasculature/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/mut/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/__init__.py to __init__.cpython-312.pyc writing byte-compilation script '/tmp/tmpboivhqio.py' /usr/bin/python3 /tmp/tmpboivhqio.py removing /tmp/tmpboivhqio.py running install_egg_info running egg_info creating morphio.egg-info writing morphio.egg-info/PKG-INFO writing dependency_links to morphio.egg-info/dependency_links.txt writing requirements to morphio.egg-info/requires.txt writing top-level names to morphio.egg-info/top_level.txt writing manifest file 'morphio.egg-info/SOURCES.txt' reading manifest file 'morphio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '3rdparty/HighFive/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/HighFive/include' warning: no files found matching '*' under directory '3rdparty/HighFive/CMake' warning: no files found matching '*' under directory '3rdparty/HighFive/doc' warning: no files found matching '3rdparty/lexertl14/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/lexertl14/include/lexertl' warning: no files found matching '*' under directory 'binds/python/pybind11/include' warning: no files found matching '*.cmake' under directory 'binds/python/pybind11/tools' warning: no files found matching 'binds/python/pybind11/CMakeLists.txt' warning: no files found matching 'binds/python/pybind11/LICENSE' no previously-included directories found matching 'ci' no previously-included directories found matching 'doc' no previously-included directories found matching 'scripts' no previously-included directories found matching 'examples' adding license file 'LICENSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'morphio.egg-info/SOURCES.txt' Copying morphio.egg-info to /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio-3.3.9-py3.12.egg-info running install_scripts + rm -rfv /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/bin/__pycache__ + '[' /usr/lib/python3.12/site-packages '!=' /usr/lib64/python3.12/site-packages ']' + mv -v /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/__init__.py /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/__pycache__ /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/mut /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/vasculature /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio renamed '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/__init__.py' -> '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio/__init__.py' renamed '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/__pycache__' -> '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio/__pycache__' renamed '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/mut' -> '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio/mut' renamed '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio/vasculature' -> '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio/vasculature' + mv -v /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio-3.3.9-py3.12.egg-info /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/ renamed '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages/morphio-3.3.9-py3.12.egg-info' -> '/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages/morphio-3.3.9-py3.12.egg-info' + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 3.3.9-2.fc41 --unique-debug-suffix -3.3.9-2.fc41.aarch64 --unique-debug-src-base morphio-3.3.9-2.fc41.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/MorphIO-3.3.9 find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/morphio-3.3.9-2.fc41.aarch64 628 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12 using python3.12 Bytecompiling .py files below /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.jqiJVE + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.3.9 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + SETUPTOOLS_SCM_PRETEND_VERSION=3.3.9 + /usr/bin/ctest --test-dir redhat-linux-build --output-on-failure --force-new-ctest-process -j4 -VV Internal ctest changing into directory: /builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build UpdateCTestConfiguration from :/builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build/DartConfiguration.tcl Test project /builddir/build/BUILD/MorphIO-3.3.9/redhat-linux-build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: unittests 1: Test command: /builddir/build/BUILD/MorphIO-3.3.9/bin/unittests 1: Working Directory: /builddir/build/BUILD/MorphIO-3.3.9/tests 1: Test timeout computed to be: 10000000 1: 1: data/single_point_root.asc:0:warning 1: Warning: no soma found in file 1: 1: Warning: section 1 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: section 2 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: section 3 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: Skipping an attempt to write an empty morphology. 1: 1: Warning: writing file without a soma 1: 1: Warning: writing soma set to SOMA_UNDEFINED 1: 1: Soma must be stacked cylinders or a point: see https://github.com/BlueBrain/MorphIO/issues/457 1: 1: Three Point Soma: Only one column has the same coordinates. 1: 1: data/h5/v1/Neuron-no-soma.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/single-neurite.h5:0:warning 1: Warning: no soma found in file 1: 1: data/markers.asc:0:warning 1: Warning: no soma found in file 1: 1: data/annotations.asc:0:warning 1: Warning: no soma found in file 1: 1: Warning: section 1 is the only child of section: 0 1: It will be merged with the parent section 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: =============================================================================== 1: All tests passed (444 assertions in 57 test cases) 1: 1/1 Test #1: unittests ........................ Passed 0.07 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.07 sec ++ basename /builddir/build/BUILD/MorphIO-3.3.9 + xdir=MorphIO-3.3.9 + cd .. + k='not test_v2' + k='not test_v2 and not test_neurolucida_markers' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read and not test_dendritic_spine_round_trip_empty_postsynaptic_density' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib64/python3.12/site-packages:/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/lib/python3.12/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest MorphIO-3.3.9/tests -k 'not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read and not test_dendritic_spine_round_trip_empty_postsynaptic_density' -v ============================= test session starts ============================== platform linux -- Python 3.12.3, pytest-7.4.3, pluggy-1.3.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/MorphIO-3.3.9 configfile: pyproject.toml collecting ... collected 160 items / 8 deselected / 152 selected MorphIO-3.3.9/tests/test_0_API.py::test_doc_exists PASSED [ 0%] MorphIO-3.3.9/tests/test_0_API.py::test_mut_immut_have_same_methods PASSED [ 1%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_empty_vasculature PASSED [ 1%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_components_vasculature PASSED [ 2%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_section_types PASSED [ 3%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_section_offsets PASSED [ 3%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_section_connectivity PASSED [ 4%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_iterators_vasculature PASSED [ 5%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_from_pathlib PASSED [ 5%] MorphIO-3.3.9/tests/test_10_vasculature.py::test_section___str__ PASSED [ 6%] MorphIO-3.3.9/tests/test_11_collection.py::test_load_from_collection_with_context[collection_path0] PASSED [ 7%] MorphIO-3.3.9/tests/test_11_collection.py::test_load_from_collection_with_context[collection_path1] PASSED [ 7%] MorphIO-3.3.9/tests/test_11_collection.py::test_load_from_collection_without_context[collection_path0] PASSED [ 8%] MorphIO-3.3.9/tests/test_11_collection.py::test_load_from_collection_without_context[collection_path1] PASSED [ 9%] MorphIO-3.3.9/tests/test_11_collection.py::test_container_unordered[collection_path0] PASSED [ 9%] MorphIO-3.3.9/tests/test_11_collection.py::test_container_unordered[collection_path1] PASSED [ 10%] MorphIO-3.3.9/tests/test_11_collection.py::test_container_unordered1[collection_path0] PASSED [ 11%] MorphIO-3.3.9/tests/test_11_collection.py::test_container_unordered1[collection_path1] PASSED [ 11%] MorphIO-3.3.9/tests/test_11_collection.py::test_container_with_warning_handler PASSED [ 12%] MorphIO-3.3.9/tests/test_1_swc.py::test_build_from_string PASSED [ 13%] MorphIO-3.3.9/tests/test_1_swc.py::test_read_single_neurite PASSED [ 13%] MorphIO-3.3.9/tests/test_1_swc.py::test_skip_comments PASSED [ 14%] MorphIO-3.3.9/tests/test_1_swc.py::test_read_simple PASSED [ 15%] MorphIO-3.3.9/tests/test_1_swc.py::test_set_raise_warnings PASSED [ 15%] MorphIO-3.3.9/tests/test_1_swc.py::test_repeated_id PASSED [ 16%] MorphIO-3.3.9/tests/test_1_swc.py::test_neurite_followed_by_soma PASSED [ 17%] MorphIO-3.3.9/tests/test_1_swc.py::test_read_split_soma PASSED [ 17%] MorphIO-3.3.9/tests/test_1_swc.py::test_weird_indent PASSED [ 18%] MorphIO-3.3.9/tests/test_1_swc.py::test_cyclic PASSED [ 19%] MorphIO-3.3.9/tests/test_1_swc.py::test_simple_reversed PASSED [ 19%] MorphIO-3.3.9/tests/test_1_swc.py::test_soma_type_1_point PASSED [ 20%] MorphIO-3.3.9/tests/test_1_swc.py::test_soma_type_2_point PASSED [ 21%] MorphIO-3.3.9/tests/test_1_swc.py::test_soma_type_many_point PASSED [ 21%] MorphIO-3.3.9/tests/test_1_swc.py::test_soma_type_3_point PASSED [ 22%] MorphIO-3.3.9/tests/test_1_swc.py::test_swc_threepoint_soma_tolerance PASSED [ 23%] MorphIO-3.3.9/tests/test_1_swc.py::test_read_weird_ids PASSED [ 23%] MorphIO-3.3.9/tests/test_1_swc.py::test_multiple_soma PASSED [ 24%] MorphIO-3.3.9/tests/test_1_swc.py::test_disconnected_neurite PASSED [ 25%] MorphIO-3.3.9/tests/test_1_swc.py::test_neurite_wrong_root_point PASSED [ 25%] MorphIO-3.3.9/tests/test_1_swc.py::test_read_duplicate PASSED [ 26%] MorphIO-3.3.9/tests/test_1_swc.py::test_unsupported_section_type PASSED [ 26%] MorphIO-3.3.9/tests/test_1_swc.py::test_root_node_split PASSED [ 27%] MorphIO-3.3.9/tests/test_1_swc.py::test_three_point_soma PASSED [ 28%] MorphIO-3.3.9/tests/test_1_swc.py::test_zero_diameter PASSED [ 28%] MorphIO-3.3.9/tests/test_1_swc.py::test_version PASSED [ 29%] MorphIO-3.3.9/tests/test_1_swc.py::test_no_soma PASSED [ 30%] MorphIO-3.3.9/tests/test_1_swc.py::test_WarningHandlerCollector PASSED [ 30%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_soma PASSED [ 31%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_parse_number_with_plus_symbol PASSED [ 32%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_unknown_token PASSED [ 32%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_unfinished_point PASSED [ 33%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_multiple_soma PASSED [ 34%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_single_neurite_no_soma PASSED [ 34%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_skip_header PASSED [ 35%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_read_with_duplicates PASSED [ 36%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_read_without_duplicates PASSED [ 36%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_explicit_duplicates_with_arbitrary_diameter PASSED [ 37%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_unfinished_file PASSED [ 38%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_section_single_point PASSED [ 38%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_single_children PASSED [ 39%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_spine PASSED [ 40%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_single_point_section_duplicate_parent PASSED [ 40%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_single_point_section_duplicate_parent_complex PASSED [ 41%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_spine1 PASSED [ 42%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_markers PASSED [ 42%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_string_markers PASSED [ 43%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_invalid_incomplete PASSED [ 44%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_skip_font PASSED [ 44%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_skip_imagecoord PASSED [ 45%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_Sections_block PASSED [ 46%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_version PASSED [ 46%] MorphIO-3.3.9/tests/test_2_neurolucida.py::test_load_from_string PASSED [ 47%] MorphIO-3.3.9/tests/test_3_h5.py::test_v1 PASSED [ 48%] MorphIO-3.3.9/tests/test_3_h5.py::test_wrong_section_type PASSED [ 48%] MorphIO-3.3.9/tests/test_3_h5.py::test_soma_no_neurite PASSED [ 49%] MorphIO-3.3.9/tests/test_3_h5.py::test_single_children PASSED [ 50%] MorphIO-3.3.9/tests/test_4_immut.py::test_heterogeneous_sections PASSED [ 50%] MorphIO-3.3.9/tests/test_4_immut.py::test_components PASSED [ 51%] MorphIO-3.3.9/tests/test_4_immut.py::test_is_root PASSED [ 51%] MorphIO-3.3.9/tests/test_4_immut.py::test_distance PASSED [ 52%] MorphIO-3.3.9/tests/test_4_immut.py::test_iter PASSED [ 53%] MorphIO-3.3.9/tests/test_4_immut.py::test_section_offsets PASSED [ 53%] MorphIO-3.3.9/tests/test_4_immut.py::test_connectivity PASSED [ 54%] MorphIO-3.3.9/tests/test_4_immut.py::test_endoplasmic_reticulum PASSED [ 55%] MorphIO-3.3.9/tests/test_4_immut.py::test_section___str__ PASSED [ 55%] MorphIO-3.3.9/tests/test_4_immut.py::test_section_has_same_shape PASSED [ 56%] MorphIO-3.3.9/tests/test_4_immut.py::test_from_pathlib PASSED [ 57%] MorphIO-3.3.9/tests/test_4_immut.py::test_more_iter PASSED [ 57%] MorphIO-3.3.9/tests/test_4_immut.py::test_glia PASSED [ 58%] MorphIO-3.3.9/tests/test_4_immut.py::test_dendritic_spine PASSED [ 59%] MorphIO-3.3.9/tests/test_4_immut.py::test_dendritic_spine_add_root_section PASSED [ 59%] MorphIO-3.3.9/tests/test_5_mut.py::test_heterogeneous_sections PASSED [ 60%] MorphIO-3.3.9/tests/test_5_mut.py::test_point_level PASSED [ 61%] MorphIO-3.3.9/tests/test_5_mut.py::test_connectivity PASSED [ 61%] MorphIO-3.3.9/tests/test_5_mut.py::test_empty_neurite PASSED [ 62%] MorphIO-3.3.9/tests/test_5_mut.py::test_single_neurite PASSED [ 63%] MorphIO-3.3.9/tests/test_5_mut.py::test_child_section PASSED [ 63%] MorphIO-3.3.9/tests/test_5_mut.py::test_append_no_duplicate PASSED [ 64%] MorphIO-3.3.9/tests/test_5_mut.py::test_mut_copy_ctor PASSED [ 65%] MorphIO-3.3.9/tests/test_5_mut.py::test_build_read_only PASSED [ 65%] MorphIO-3.3.9/tests/test_5_mut.py::test_mutable_immutable_equivalence PASSED [ 66%] MorphIO-3.3.9/tests/test_5_mut.py::test_sections_are_not_dereferenced PASSED [ 67%] MorphIO-3.3.9/tests/test_5_mut.py::test_append_mutable_section PASSED [ 67%] MorphIO-3.3.9/tests/test_5_mut.py::test_iterators PASSED [ 68%] MorphIO-3.3.9/tests/test_5_mut.py::test_non_C_nparray PASSED [ 69%] MorphIO-3.3.9/tests/test_5_mut.py::test_annotation PASSED [ 69%] MorphIO-3.3.9/tests/test_5_mut.py::test_empty_sibling PASSED [ 70%] MorphIO-3.3.9/tests/test_5_mut.py::test_nested_single_child PASSED [ 71%] MorphIO-3.3.9/tests/test_5_mut.py::test_section___str__ PASSED [ 71%] MorphIO-3.3.9/tests/test_5_mut.py::test_from_pathlib PASSED [ 72%] MorphIO-3.3.9/tests/test_5_mut.py::test_endoplasmic_reticulum PASSED [ 73%] MorphIO-3.3.9/tests/test_5_mut.py::test_remove_unifurcations PASSED [ 73%] MorphIO-3.3.9/tests/test_5_mut.py::test_remove_rootsection PASSED [ 74%] MorphIO-3.3.9/tests/test_5_mut.py::test_remove_rootsection_in_loop PASSED [ 75%] MorphIO-3.3.9/tests/test_5_mut.py::test_glia PASSED [ 75%] MorphIO-3.3.9/tests/test_5_mut.py::test_glia_round_trip PASSED [ 76%] MorphIO-3.3.9/tests/test_5_mut.py::test_dendritic_spine PASSED [ 76%] MorphIO-3.3.9/tests/test_5_mut.py::test_dendritic_spine_round_trip PASSED [ 77%] MorphIO-3.3.9/tests/test_5_mut.py::test_lifetime_destroyed_morphology PASSED [ 78%] MorphIO-3.3.9/tests/test_5_mut.py::test_lifetime_access_properties_no_morphology PASSED [ 78%] MorphIO-3.3.9/tests/test_5_mut.py::test_lifetime_copy_single_section PASSED [ 79%] MorphIO-3.3.9/tests/test_5_mut.py::test_lifetime_iteration_fails_with_orphan_section PASSED [ 80%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__maintain_children_order_non_root_section PASSED [ 80%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__maintain_children_order_non_root_section_multiple PASSED [ 81%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__maintain_children_order_root_section PASSED [ 82%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__unifurcation_bridge PASSED [ 82%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__remove_all_children PASSED [ 83%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__append_delete PASSED [ 84%] MorphIO-3.3.9/tests/test_5_mut.py::test_delete_section__traversals PASSED [ 84%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_empty_file PASSED [ 85%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_undefined_soma PASSED [ 86%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_soma_basic PASSED [ 86%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_basic PASSED [ 87%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_merge_only_child_asc_h5 PASSED [ 88%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_merge_only_child_swc PASSED [ 88%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_perimeter PASSED [ 89%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_no_soma PASSED [ 90%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_soma__points_no_diameters PASSED [ 90%] MorphIO-3.3.9/tests/test_6_writers.py::test_duplicate_different_diameter PASSED [ 91%] MorphIO-3.3.9/tests/test_6_writers.py::test_single_point_root_section PASSED [ 92%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_custom_property__throws PASSED [ 92%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_soma_types PASSED [ 93%] MorphIO-3.3.9/tests/test_6_writers.py::test_write_soma_invariants PASSED [ 94%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_no_modifier PASSED [ 94%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_nrn_order PASSED [ 95%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_nrn_order_stability PASSED [ 96%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_two_point_section PASSED [ 96%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_soma_sphere PASSED [ 97%] MorphIO-3.3.9/tests/test_7_modifiers.py::test_no_duplicate PASSED [ 98%] MorphIO-3.3.9/tests/test_8_all_morphologies.py::test_all SKIPPED (ba...) [ 98%] MorphIO-3.3.9/tests/test_9_surfaces.py::test_stacked_cylinder PASSED [ 99%] MorphIO-3.3.9/tests/test_9_surfaces.py::test_contour PASSED [100%] ================= 151 passed, 1 skipped, 8 deselected in 0.70s ================= + RPM_EC=0 ++ jobs -p + exit 0 Processing files: morphio-3.3.9-2.fc41.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.WDTAtw + umask 022 + cd /builddir/build/BUILD + cd MorphIO-3.3.9 + LICENSEDIR=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/LICENSE.txt /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio + RPM_EC=0 ++ jobs -p + exit 0 Provides: libmorphio.so.0.0.0()(64bit) morphio = 3.3.9-2.fc41 morphio(aarch-64) = 3.3.9-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.200()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: morphio-devel-3.3.9-2.fc41.aarch64 Provides: cmake(MorphIO) cmake(morphio) morphio-devel = 3.3.9-2.fc41 morphio-devel(aarch-64) = 3.3.9-2.fc41 morphio-static = 3.3.9-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: cmake-filesystem(aarch-64) libmorphio.so.0.0.0()(64bit) Processing files: python3-morphio-3.3.9-2.fc41.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.oobpCN + umask 022 + cd /builddir/build/BUILD + cd MorphIO-3.3.9 + LICENSEDIR=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/python3-morphio + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/python3-morphio + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/LICENSE.txt /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/python3-morphio + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-morphio = 3.3.9-2.fc41 python3-morphio = 3.3.9-2.fc41 python3-morphio(aarch-64) = 3.3.9-2.fc41 python3.12-morphio = 3.3.9-2.fc41 python3.12dist(morphio) = 3.3.9 python3dist(morphio) = 3.3.9 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.200()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 python3.12dist(numpy) >= 1.14.1 rtld(GNU_HASH) Processing files: morphio-doc-3.3.9-2.fc41.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.y0aogB + umask 022 + cd /builddir/build/BUILD + cd MorphIO-3.3.9 + DOCDIR=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/AUTHORS.txt /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/CHANGELOG.md /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/CONTRIBUTING.md /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/README.rst /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/examples /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/doc/morphio-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.W1l8WL + umask 022 + cd /builddir/build/BUILD + cd MorphIO-3.3.9 + LICENSEDIR=/builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio-doc + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio-doc + cp -pr /builddir/build/BUILD/MorphIO-3.3.9/LICENSE.txt /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64/usr/share/licenses/morphio-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: morphio-doc = 3.3.9-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: morphio-debugsource-3.3.9-2.fc41.aarch64 Provides: morphio-debugsource = 3.3.9-2.fc41 morphio-debugsource(aarch-64) = 3.3.9-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: morphio-debuginfo-3.3.9-2.fc41.aarch64 Provides: debuginfo(build-id) = 7fbeb636467083fa2a22ed2b6ec36377ef866171 libmorphio.so.0.0.0-3.3.9-2.fc41.aarch64.debug()(64bit) morphio-debuginfo = 3.3.9-2.fc41 morphio-debuginfo(aarch-64) = 3.3.9-2.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: morphio-debugsource(aarch-64) = 3.3.9-2.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 Wrote: /builddir/build/RPMS/morphio-debugsource-3.3.9-2.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/morphio-devel-3.3.9-2.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/morphio-doc-3.3.9-2.fc41.noarch.rpm Wrote: /builddir/build/RPMS/morphio-3.3.9-2.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/python3-morphio-3.3.9-2.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/morphio-debuginfo-3.3.9-2.fc41.aarch64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.7bfHCi + umask 022 + cd /builddir/build/BUILD + cd MorphIO-3.3.9 + /usr/bin/rm -rf /builddir/build/BUILDROOT/morphio-3.3.9-2.fc41.aarch64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.hy9CYv + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/MorphIO-3.3.9-SPECPARTS + rm -rf MorphIO-3.3.9 MorphIO-3.3.9.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild morphio-3.3.9-2.fc41.src.rpm Finish: build phase for morphio-3.3.9-2.fc41.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-aarch64-1714927377.127991/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-aarch64-1714927377.127991/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-aarch64-1714927377.127991/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/morphio-3.3.9-2.fc41.src.rpm) Config(child) 2 minutes 26 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "morphio-debugsource", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "aarch64" }, { "name": "morphio", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "aarch64" }, { "name": "python3-morphio", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "aarch64" }, { "name": "morphio-doc", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "noarch" }, { "name": "morphio", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "src" }, { "name": "morphio-debuginfo", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "aarch64" }, { "name": "morphio-devel", "epoch": null, "version": "3.3.9", "release": "2.fc41", "arch": "aarch64" } ] } RPMResults finished