Warning: Permanently added '44.211.170.224' (ED25519) to the list of known hosts. INFO: Calling: curl -H Pragma: -o preprocessCore_1.58.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/R-preprocessCore/preprocessCore_1.58.0.tar.gz/md5/af17fa3ab71e94886d2f25295f7fff7a/preprocessCore_1.58.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 121k 100 121k 0 0 6232k 0 --:--:-- --:--:-- --:--:-- 6373k INFO: Reading stdout from command: md5sum preprocessCore_1.58.0.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-mib7ubqx/R-preprocessCore/R-preprocessCore.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-mib7ubqx/R-preprocessCore --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1717094236.441350 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-mib7ubqx/R-preprocessCore/R-preprocessCore.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-mib7ubqx/R-preprocessCore --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1717094236.441350 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-mib7ubqx/R-preprocessCore/R-preprocessCore.spec) Config(fedora-39-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.6 INFO: Mock Version: 5.6 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-aarch64-bootstrap-1717094236.441350/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-aarch64-bootstrap-1717094236.441350/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/8fa72826efb14b45010ccef79a373180904f41a36d2e60fc3fbc63794fde4263/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/8fa72826efb14b45010ccef79a373180904f41a36d2e60fc3fbc63794fde4263/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 132 MB/s | 18 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 115 MB/s | 74 MB 00:00 fedora 56 MB/s | 86 MB 00:01 updates 12 MB/s | 36 MB 00:03 Last metadata expiration check: 0:00:03 ago on Thu May 30 18:38:02 2024. Package python3-dnf-4.19.2-1.fc39.noarch is already installed. Dependencies resolved. ========================================================================================================================== Package Arch Version Repository Size ========================================================================================================================== Installing: dnf5 aarch64 5.2.2.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 640 k replacing dnf.noarch 4.19.2-1.fc39 replacing yum.noarch 4.19.2-1.fc39 python3-dnf-plugins-core noarch 4.7.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 302 k Upgrading: dnf-data noarch 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k libstdc++ aarch64 14.1.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 828 k python3-dnf noarch 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 580 k Installing dependencies: dbus-libs aarch64 1:1.14.10-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 156 k fmt aarch64 10.2.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 121 k libdnf5 aarch64 5.2.2.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 978 k libdnf5-cli aarch64 5.2.2.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 288 k python3-dateutil noarch 1:2.8.2-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 345 k python3-dbus aarch64 1.3.2-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 146 k python3-distro noarch 1.9.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45 k python3-six noarch 1.16.0-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python3-systemd aarch64 235-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 101 k sdbus-cpp aarch64 1.5.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 103 k Transaction Summary ========================================================================================================================== Install 12 Packages Upgrade 3 Packages Total download size: 4.6 M Downloading Packages: (1/15): dbus-libs-1.14.10-3.fc40.aarch64.rpm 2.3 MB/s | 156 kB 00:00 (2/15): dnf5-5.2.2.0-1.fc41.aarch64.rpm 6.5 MB/s | 640 kB 00:00 (3/15): libdnf5-cli-5.2.2.0-1.fc41.aarch64.rpm 19 MB/s | 288 kB 00:00 (4/15): fmt-10.2.1-4.fc41.aarch64.rpm 1.0 MB/s | 121 kB 00:00 (5/15): libdnf5-5.2.2.0-1.fc41.aarch64.rpm 17 MB/s | 978 kB 00:00 (6/15): python3-dateutil-2.8.2-13.fc40.noarch.r 23 MB/s | 345 kB 00:00 (7/15): python3-dbus-1.3.2-6.fc40.aarch64.rpm 7.3 MB/s | 146 kB 00:00 (8/15): python3-distro-1.9.0-3.fc40.noarch.rpm 3.3 MB/s | 45 kB 00:00 (9/15): python3-six-1.16.0-14.fc40.noarch.rpm 3.1 MB/s | 41 kB 00:00 (10/15): python3-dnf-plugins-core-4.7.0-1.fc41. 12 MB/s | 302 kB 00:00 (11/15): sdbus-cpp-1.5.0-2.fc41.aarch64.rpm 7.5 MB/s | 103 kB 00:00 (12/15): python3-systemd-235-9.fc40.aarch64.rpm 2.9 MB/s | 101 kB 00:00 (13/15): dnf-data-4.20.0-1.fc41.noarch.rpm 2.0 MB/s | 39 kB 00:00 (14/15): libstdc++-14.1.1-4.fc41.aarch64.rpm 41 MB/s | 828 kB 00:00 (15/15): python3-dnf-4.20.0-1.fc41.noarch.rpm 18 MB/s | 580 kB 00:00 -------------------------------------------------------------------------------- Total 23 MB/s | 4.6 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : libstdc++-14.1.1-4.fc41.aarch64 1/20 Installing : fmt-10.2.1-4.fc41.aarch64 2/20 Installing : libdnf5-5.2.2.0-1.fc41.aarch64 3/20 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : libdnf5-cli-5.2.2.0-1.fc41.aarch64 4/20 Upgrading : dnf-data-4.20.0-1.fc41.noarch 5/20 Upgrading : python3-dnf-4.20.0-1.fc41.noarch 6/20 Installing : sdbus-cpp-1.5.0-2.fc41.aarch64 7/20 Installing : python3-systemd-235-9.fc40.aarch64 8/20 Installing : python3-six-1.16.0-14.fc40.noarch 9/20 Installing : python3-dateutil-1:2.8.2-13.fc40.noarch 10/20 Installing : python3-distro-1.9.0-3.fc40.noarch 11/20 Installing : dbus-libs-1:1.14.10-3.fc40.aarch64 12/20 Installing : python3-dbus-1.3.2-6.fc40.aarch64 13/20 Installing : python3-dnf-plugins-core-4.7.0-1.fc41.noarch 14/20 Installing : dnf5-5.2.2.0-1.fc41.aarch64 15/20 Obsoleting : yum-4.19.2-1.fc39.noarch 16/20 Running scriptlet: dnf-4.19.2-1.fc39.noarch 17/20 Obsoleting : dnf-4.19.2-1.fc39.noarch 17/20 warning: directory /var/cache/dnf: remove failed: Device or resource busy Running scriptlet: dnf-4.19.2-1.fc39.noarch 17/20 Cleanup : python3-dnf-4.19.2-1.fc39.noarch 18/20 Cleanup : dnf-data-4.19.2-1.fc39.noarch 19/20 Cleanup : libstdc++-13.3.1-1.fc39.aarch64 20/20 Running scriptlet: libstdc++-13.3.1-1.fc39.aarch64 20/20 Verifying : dbus-libs-1:1.14.10-3.fc40.aarch64 1/20 Verifying : dnf5-5.2.2.0-1.fc41.aarch64 2/20 Verifying : dnf-4.19.2-1.fc39.noarch 3/20 Verifying : yum-4.19.2-1.fc39.noarch 4/20 Verifying : fmt-10.2.1-4.fc41.aarch64 5/20 Verifying : libdnf5-5.2.2.0-1.fc41.aarch64 6/20 Verifying : libdnf5-cli-5.2.2.0-1.fc41.aarch64 7/20 Verifying : python3-dateutil-1:2.8.2-13.fc40.noarch 8/20 Verifying : python3-dbus-1.3.2-6.fc40.aarch64 9/20 Verifying : python3-distro-1.9.0-3.fc40.noarch 10/20 Verifying : python3-dnf-plugins-core-4.7.0-1.fc41.noarch 11/20 Verifying : python3-six-1.16.0-14.fc40.noarch 12/20 Verifying : python3-systemd-235-9.fc40.aarch64 13/20 Verifying : sdbus-cpp-1.5.0-2.fc41.aarch64 14/20 Verifying : dnf-data-4.20.0-1.fc41.noarch 15/20 Verifying : dnf-data-4.19.2-1.fc39.noarch 16/20 Verifying : libstdc++-14.1.1-4.fc41.aarch64 17/20 Verifying : libstdc++-13.3.1-1.fc39.aarch64 18/20 Verifying : python3-dnf-4.20.0-1.fc41.noarch 19/20 Verifying : python3-dnf-4.19.2-1.fc39.noarch 20/20 Upgraded: dnf-data-4.20.0-1.fc41.noarch libstdc++-14.1.1-4.fc41.aarch64 python3-dnf-4.20.0-1.fc41.noarch Installed: dbus-libs-1:1.14.10-3.fc40.aarch64 dnf5-5.2.2.0-1.fc41.aarch64 fmt-10.2.1-4.fc41.aarch64 libdnf5-5.2.2.0-1.fc41.aarch64 libdnf5-cli-5.2.2.0-1.fc41.aarch64 python3-dateutil-1:2.8.2-13.fc40.noarch python3-dbus-1.3.2-6.fc40.aarch64 python3-distro-1.9.0-3.fc40.noarch python3-dnf-plugins-core-4.7.0-1.fc41.noarch python3-six-1.16.0-14.fc40.noarch python3-systemd-235-9.fc40.aarch64 sdbus-cpp-1.5.0-2.fc41.aarch64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-aarch64-1717094236.441350/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.aarch64 rpm-sequoia-1.6.0-1.fc39.aarch64 python3-dnf-4.20.0-1.fc41.noarch python3-dnf-plugins-core-4.7.0-1.fc41.noarch dnf5-5.2.2.0-1.fc41.aarch64 Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 199 MB/s | 18 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 177 MB/s | 74 MB 00:00 fedora 30 MB/s | 86 MB 00:02 updates 12 MB/s | 36 MB 00:02 Last metadata expiration check: 0:00:03 ago on Thu May 30 18:39:00 2024. Dependencies resolved. ============================================================================================================================================= Package Arch Version Repository Size ============================================================================================================================================= Installing group/module packages: bash aarch64 5.2.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 M bzip2 aarch64 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 52 k coreutils aarch64 9.5-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M cpio aarch64 2.15-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 285 k diffutils aarch64 3.10-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 395 k fedora-release-common noarch 41-0.13 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k findutils aarch64 1:4.9.0-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 489 k gawk aarch64 5.3.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M glibc-minimal-langpack aarch64 2.39.9000-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112 k grep aarch64 3.11-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 288 k gzip aarch64 1.13-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 163 k info aarch64 7.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 183 k patch aarch64 2.7.6-24.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 130 k redhat-rpm-config noarch 291-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 76 k rpm-build aarch64 4.19.91-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 76 k sed aarch64 4.9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 307 k shadow-utils aarch64 2:4.15.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 M tar aarch64 2:1.35-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 848 k unzip aarch64 6.0-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 185 k util-linux aarch64 2.40.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M which aarch64 2.21-41.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 42 k xz aarch64 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 533 k Installing dependencies: add-determinism-nopython aarch64 0.2.0-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 818 k alternatives aarch64 1.27-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40 k ansible-srpm-macros noarch 1-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k audit-libs aarch64 4.0.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 126 k authselect aarch64 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 141 k authselect-libs aarch64 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 205 k basesystem noarch 11-20.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.2 k binutils aarch64 2.42.50-11.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.9 M binutils-gold aarch64 2.42.50-11.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 967 k build-reproducibility-srpm-macros noarch 0.2.0-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.1 k bzip2-libs aarch64 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43 k ca-certificates noarch 2023.2.62_v7.0.401-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 862 k coreutils-common aarch64 9.5-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 M cracklib aarch64 2.9.11-5.fc40 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elfutils-default-yama-scope noarch 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 k elfutils-libelf aarch64 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 209 k elfutils-libs aarch64 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 264 k fedora-gpg-keys noarch 41-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 122 k fedora-release noarch 41-0.13 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11 k fedora-release-identity-basic noarch 41-0.13 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12 k fedora-repos noarch 41-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.3 k fedora-repos-rawhide noarch 41-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.9 k file aarch64 5.45-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 50 k file-libs aarch64 5.45-5.fc41 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00:00 (81/155): libidn2-2.3.7-1.fc40.aarch64.rpm 4.6 MB/s | 113 kB 00:00 (82/155): libpkgconf-2.1.1-1.fc41.aarch64.rpm 2.1 MB/s | 39 kB 00:00 (83/155): libpsl-0.21.5-3.fc40.aarch64.rpm 3.3 MB/s | 64 kB 00:00 (84/155): libnsl2-2.0.1-1.fc40.aarch64.rpm 1.1 MB/s | 30 kB 00:00 (85/155): libselinux-3.6-4.fc40.aarch64.rpm 4.6 MB/s | 88 kB 00:00 (86/155): libpwquality-1.4.5-9.fc40.aarch64.rpm 4.4 MB/s | 109 kB 00:00 (87/155): libsemanage-3.6-3.fc40.aarch64.rpm 5.9 MB/s | 115 kB 00:00 (88/155): libsmartcols-2.40.1-1.fc41.aarch64.rp 4.0 MB/s | 83 kB 00:00 (89/155): libssh-0.10.6-6.fc41.aarch64.rpm 10 MB/s | 214 kB 00:00 (90/155): libsepol-3.6-3.fc40.aarch64.rpm 13 MB/s | 327 kB 00:00 (91/155): libtasn1-4.19.0-6.fc40.aarch64.rpm 3.8 MB/s | 73 kB 00:00 (92/155): libstdc++-14.1.1-4.fc41.aarch64.rpm 34 MB/s | 828 kB 00:00 (93/155): libssh-config-0.10.6-6.fc41.noarch.rp 376 kB/s | 9.1 kB 00:00 (94/155): libtool-ltdl-2.4.7-10.fc40.aarch64.rp 2.0 MB/s | 36 kB 00:00 (95/155): libunistring-1.1-7.fc41.aarch64.rpm 26 MB/s | 544 kB 00:00 (96/155): libtirpc-1.3.4-1.rc3.fc41.aarch64.rpm 3.7 MB/s | 94 kB 00:00 (97/155): libuuid-2.40.1-1.fc41.aarch64.rpm 1.5 MB/s | 29 kB 00:00 (98/155): libverto-0.3.2-8.fc40.aarch64.rpm 1.1 MB/s | 21 kB 00:00 (99/155): libutempter-1.2.1-13.fc40.aarch64.rpm 1.1 MB/s | 27 kB 00:00 (100/155): libxml2-2.12.7-1.fc41.aarch64.rpm 30 MB/s | 686 kB 00:00 (101/155): libzstd-1.5.6-1.fc41.aarch64.rpm 13 MB/s | 287 kB 00:00 (102/155): libxcrypt-4.4.36-5.fc40.aarch64.rpm 4.9 MB/s | 123 kB 00:00 (103/155): lua-srpm-macros-1-13.fc40.noarch.rpm 481 kB/s | 8.7 kB 00:00 (104/155): lz4-libs-1.9.4-6.fc40.aarch64.rpm 3.6 MB/s | 68 kB 00:00 (105/155): lua-libs-5.4.6-5.fc40.aarch64.rpm 5.3 MB/s | 131 kB 00:00 (106/155): ncurses-base-6.4-12.20240127.fc40.no 3.3 MB/s | 64 kB 00:00 (107/155): mpfr-4.2.1-4.fc41.aarch64.rpm 12 MB/s | 325 kB 00:00 (108/155): ncurses-libs-6.4-12.20240127.fc40.aa 16 MB/s | 329 kB 00:00 (109/155): ocaml-srpm-macros-10-1.fc41.noarch.r 389 kB/s | 9.0 kB 00:00 (110/155): openblas-srpm-macros-2-17.fc41.noarc 428 kB/s | 7.7 kB 00:00 (111/155): openldap-2.6.8-1.fc41.aarch64.rpm 13 MB/s | 253 kB 00:00 (112/155): p11-kit-0.25.3-4.fc40.aarch64.rpm 24 MB/s | 486 kB 00:00 (113/155): p11-kit-trust-0.25.3-4.fc40.aarch64. 7.1 MB/s | 142 kB 00:00 (114/155): openssl-libs-3.2.1-6.fc41.aarch64.rp 69 MB/s | 2.2 MB 00:00 (115/155): pam-1.6.1-3.fc41.aarch64.rpm 24 MB/s | 527 kB 00:00 (116/155): package-notes-srpm-macros-0.5-11.fc4 419 kB/s | 9.9 kB 00:00 (117/155): pam-libs-1.6.1-3.fc41.aarch64.rpm 4.3 MB/s | 57 kB 00:00 (118/155): pcre2-10.43-2.fc41.1.aarch64.rpm 11 MB/s | 226 kB 00:00 (119/155): pcre2-syntax-10.43-2.fc41.1.noarch.r 7.5 MB/s | 149 kB 00:00 (120/155): patch-2.7.6-24.fc40.aarch64.rpm 5.3 MB/s | 130 kB 00:00 (121/155): pkgconf-2.1.1-1.fc41.aarch64.rpm 2.3 MB/s | 44 kB 00:00 (122/155): pkgconf-m4-2.1.1-1.fc41.noarch.rpm 756 kB/s | 14 kB 00:00 (123/155): perl-srpm-macros-1-53.fc40.noarch.rp 355 kB/s | 8.4 kB 00:00 (124/155): popt-1.19-6.fc40.aarch64.rpm 3.1 MB/s | 60 kB 00:00 (125/155): publicsuffix-list-dafsa-20240107-3.f 3.0 MB/s | 58 kB 00:00 (126/155): pkgconf-pkg-config-2.1.1-1.fc41.aarc 417 kB/s | 9.9 kB 00:00 (127/155): qt5-srpm-macros-5.15.13-1.fc41.noarc 468 kB/s | 8.5 kB 00:00 (128/155): python-srpm-macros-3.12-9.fc41.noarc 1.2 MB/s | 24 kB 00:00 (129/155): pyproject-srpm-macros-1.12.0-1.fc40. 570 kB/s | 14 kB 00:00 (130/155): readline-8.2-8.fc40.aarch64.rpm 10 MB/s | 213 kB 00:00 (131/155): redhat-rpm-config-291-1.fc41.noarch. 3.7 MB/s | 76 kB 00:00 (132/155): qt6-srpm-macros-6.7.1-1.fc41.noarch. 369 kB/s | 8.9 kB 00:00 (133/155): rpm-build-4.19.91-4.fc41.aarch64.rpm 4.1 MB/s | 76 kB 00:00 (134/155): rpm-build-libs-4.19.91-4.fc41.aarch6 4.9 MB/s | 95 kB 00:00 (135/155): rpm-4.19.91-4.fc41.aarch64.rpm 20 MB/s | 520 kB 00:00 (136/155): rust-srpm-macros-26.3-1.fc41.noarch. 689 kB/s | 13 kB 00:00 (137/155): rpm-sequoia-1.6.0-3.fc41.aarch64.rpm 34 MB/s | 806 kB 00:00 (138/155): rpm-libs-4.19.91-4.fc41.aarch64.rpm 12 MB/s | 306 kB 00:00 (139/155): setup-2.15.0-3.fc41.noarch.rpm 7.6 MB/s | 148 kB 00:00 (140/155): sed-4.9-1.fc40.aarch64.rpm 12 MB/s | 307 kB 00:00 (141/155): shadow-utils-4.15.1-5.fc41.aarch64.r 48 MB/s | 1.3 MB 00:00 (142/155): sqlite-libs-3.45.3-1.fc41.aarch64.rp 24 MB/s | 705 kB 00:00 (143/155): systemd-libs-256~rc3-3.fc41.aarch64. 28 MB/s | 718 kB 00:00 (144/155): tar-1.35-3.fc40.aarch64.rpm 34 MB/s | 848 kB 00:00 (145/155): util-linux-core-2.40.1-1.fc41.aarch6 22 MB/s | 519 kB 00:00 (146/155): util-linux-2.40.1-1.fc41.aarch64.rpm 48 MB/s | 1.2 MB 00:00 (147/155): unzip-6.0-63.fc40.aarch64.rpm 6.5 MB/s | 185 kB 00:00 (148/155): xxhash-libs-0.8.2-2.fc40.aarch64.rpm 1.8 MB/s | 34 kB 00:00 (149/155): xz-5.4.6-3.fc41.aarch64.rpm 25 MB/s | 533 kB 00:00 (150/155): which-2.21-41.fc40.aarch64.rpm 1.7 MB/s | 42 kB 00:00 (151/155): zig-srpm-macros-1-2.fc40.noarch.rpm 437 kB/s | 8.0 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Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-9.fc41.aarch64 1/1 Preparing : 1/1 Installing : libgcc-14.1.1-4.fc41.aarch64 1/155 Running scriptlet: libgcc-14.1.1-4.fc41.aarch64 1/155 Installing : crypto-policies-20240521-1.gitf71d135.fc41.noarc 2/155 Running scriptlet: crypto-policies-20240521-1.gitf71d135.fc41.noarc 2/155 Installing : fedora-release-identity-basic-41-0.13.noarch 3/155 Installing : fedora-repos-rawhide-41-0.2.noarch 4/155 Installing : fedora-gpg-keys-41-0.2.noarch 5/155 Installing : fedora-repos-41-0.2.noarch 6/155 Installing : fedora-release-common-41-0.13.noarch 7/155 Installing : fedora-release-41-0.13.noarch 8/155 Installing : setup-2.15.0-3.fc41.noarch 9/155 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.15.0-3.fc41.noarch 9/155 Installing : filesystem-3.18-9.fc41.aarch64 10/155 Installing : basesystem-11-20.fc40.noarch 11/155 Installing : rust-srpm-macros-26.3-1.fc41.noarch 12/155 Installing : 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mpfr-4.2.1-4.fc41.aarch64 45/155 Installing : gawk-5.3.0-3.fc40.aarch64 46/155 Installing : dwz-0.15-6.fc40.aarch64 47/155 Installing : unzip-6.0-63.fc40.aarch64 48/155 Installing : file-libs-5.45-5.fc41.aarch64 49/155 Installing : file-5.45-5.fc41.aarch64 50/155 Installing : alternatives-1.27-1.fc41.aarch64 51/155 Installing : jansson-2.13.1-9.fc40.aarch64 52/155 Installing : libcap-ng-0.8.5-1.fc41.aarch64 53/155 Installing : audit-libs-4.0.1-2.fc41.aarch64 54/155 Installing : pam-libs-1.6.1-3.fc41.aarch64 55/155 Installing : libcap-2.70-1.fc41.aarch64 56/155 Installing : systemd-libs-256~rc3-3.fc41.aarch64 57/155 Installing : libcom_err-1.47.0-5.fc40.aarch64 58/155 Installing : libsepol-3.6-3.fc40.aarch64 59/155 Installing : libsmartcols-2.40.1-1.fc41.aarch64 60/155 Installing : libtasn1-4.19.0-6.fc40.aarch64 61/155 Installing : libunistring-1.1-7.fc41.aarch64 62/155 Installing : libidn2-2.3.7-1.fc40.aarch64 63/155 Installing : lua-libs-5.4.6-5.fc40.aarch64 64/155 Installing : lz4-libs-1.9.4-6.fc40.aarch64 65/155 Installing : pcre2-10.43-2.fc41.1.aarch64 66/155 Installing : libselinux-3.6-4.fc40.aarch64 67/155 Installing : sed-4.9-1.fc40.aarch64 68/155 Installing : grep-3.11-8.fc41.aarch64 69/155 Installing : findutils-1:4.9.0-8.fc40.aarch64 70/155 Installing : xz-1:5.4.6-3.fc41.aarch64 71/155 Installing : libmount-2.40.1-1.fc41.aarch64 72/155 Installing : util-linux-core-2.40.1-1.fc41.aarch64 73/155 Installing : libsemanage-3.6-3.fc40.aarch64 74/155 Installing : shadow-utils-2:4.15.1-5.fc41.aarch64 75/155 Running scriptlet: libutempter-1.2.1-13.fc40.aarch64 76/155 Installing : libutempter-1.2.1-13.fc40.aarch64 76/155 Installing : tar-2:1.35-3.fc40.aarch64 77/155 Installing : zstd-1.5.6-1.fc41.aarch64 78/155 Installing : libpsl-0.21.5-3.fc40.aarch64 79/155 Installing : zip-3.0-40.fc40.aarch64 80/155 Installing : cyrus-sasl-lib-2.1.28-22.fc41.aarch64 81/155 Installing : gdbm-1:1.23-6.fc40.aarch64 82/155 Installing : libfdisk-2.40.1-1.fc41.aarch64 83/155 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go-srpm-macros-3.6.0-1.fc41.noarch 148/155 Installing : python-srpm-macros-3.12-9.fc41.noarch 149/155 Installing : redhat-rpm-config-291-1.fc41.noarch 150/155 Installing : rpm-build-4.19.91-4.fc41.aarch64 151/155 Installing : pyproject-srpm-macros-1.12.0-1.fc40.noarch 152/155 Installing : util-linux-2.40.1-1.fc41.aarch64 153/155 Running scriptlet: util-linux-2.40.1-1.fc41.aarch64 153/155 Installing : which-2.21-41.fc40.aarch64 154/155 Installing : info-7.1-2.fc40.aarch64 155/155 Running scriptlet: filesystem-3.18-9.fc41.aarch64 155/155 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 155/155 Running scriptlet: authselect-libs-1.5.0-5.fc41.aarch64 155/155 Running scriptlet: rpm-4.19.91-4.fc41.aarch64 155/155 Running scriptlet: info-7.1-2.fc40.aarch64 155/155 Installed: add-determinism-nopython-0.2.0-9.fc41.aarch64 alternatives-1.27-1.fc41.aarch64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-2.fc41.aarch64 authselect-1.5.0-5.fc41.aarch64 authselect-libs-1.5.0-5.fc41.aarch64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.aarch64 binutils-2.42.50-11.fc41.aarch64 binutils-gold-2.42.50-11.fc41.aarch64 build-reproducibility-srpm-macros-0.2.0-9.fc41.noarch bzip2-1.0.8-18.fc40.aarch64 bzip2-libs-1.0.8-18.fc40.aarch64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.aarch64 coreutils-common-9.5-1.fc41.aarch64 cpio-2.15-1.fc40.aarch64 cracklib-2.9.11-5.fc40.aarch64 crypto-policies-20240521-1.gitf71d135.fc41.noarch curl-8.8.0-1.fc41.aarch64 cyrus-sasl-lib-2.1.28-22.fc41.aarch64 debugedit-5.0-16.fc41.aarch64 diffutils-3.10-5.fc40.aarch64 dwz-0.15-6.fc40.aarch64 ed-1.20.2-1.fc41.aarch64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.aarch64 elfutils-debuginfod-client-0.191-7.fc41.aarch64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.aarch64 elfutils-libs-0.191-7.fc41.aarch64 fedora-gpg-keys-41-0.2.noarch fedora-release-41-0.13.noarch fedora-release-common-41-0.13.noarch fedora-release-identity-basic-41-0.13.noarch fedora-repos-41-0.2.noarch fedora-repos-rawhide-41-0.2.noarch file-5.45-5.fc41.aarch64 file-libs-5.45-5.fc41.aarch64 filesystem-3.18-9.fc41.aarch64 findutils-1:4.9.0-8.fc40.aarch64 fonts-srpm-macros-1:2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.aarch64 gdb-minimal-14.2-9.fc41.aarch64 gdbm-1:1.23-6.fc40.aarch64 gdbm-libs-1:1.23-6.fc40.aarch64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-18.fc41.aarch64 glibc-common-2.39.9000-18.fc41.aarch64 glibc-gconv-extra-2.39.9000-18.fc41.aarch64 glibc-minimal-langpack-2.39.9000-18.fc41.aarch64 gmp-1:6.3.0-1.fc41.aarch64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-8.fc41.aarch64 gzip-1.13-1.fc40.aarch64 info-7.1-2.fc40.aarch64 jansson-2.13.1-9.fc40.aarch64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.aarch64 krb5-libs-1.21.2-5.fc40.aarch64 libacl-2.3.2-1.fc40.aarch64 libarchive-3.7.4-1.fc41.aarch64 libattr-2.5.2-3.fc40.aarch64 libblkid-2.40.1-1.fc41.aarch64 libbrotli-1.1.0-3.fc40.aarch64 libcap-2.70-1.fc41.aarch64 libcap-ng-0.8.5-1.fc41.aarch64 libcom_err-1.47.0-5.fc40.aarch64 libcurl-8.8.0-1.fc41.aarch64 libeconf-0.6.2-2.fc41.aarch64 libevent-2.1.12-13.fc41.aarch64 libfdisk-2.40.1-1.fc41.aarch64 libffi-3.4.6-1.fc41.aarch64 libgcc-14.1.1-4.fc41.aarch64 libgomp-14.1.1-4.fc41.aarch64 libidn2-2.3.7-1.fc40.aarch64 libmount-2.40.1-1.fc41.aarch64 libnghttp2-1.62.0-1.fc41.aarch64 libnsl2-2.0.1-1.fc40.aarch64 libpkgconf-2.1.1-1.fc41.aarch64 libpsl-0.21.5-3.fc40.aarch64 libpwquality-1.4.5-9.fc40.aarch64 libselinux-3.6-4.fc40.aarch64 libsemanage-3.6-3.fc40.aarch64 libsepol-3.6-3.fc40.aarch64 libsmartcols-2.40.1-1.fc41.aarch64 libssh-0.10.6-6.fc41.aarch64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.1.1-4.fc41.aarch64 libtasn1-4.19.0-6.fc40.aarch64 libtirpc-1.3.4-1.rc3.fc41.aarch64 libtool-ltdl-2.4.7-10.fc40.aarch64 libunistring-1.1-7.fc41.aarch64 libutempter-1.2.1-13.fc40.aarch64 libuuid-2.40.1-1.fc41.aarch64 libverto-0.3.2-8.fc40.aarch64 libxcrypt-4.4.36-5.fc40.aarch64 libxml2-2.12.7-1.fc41.aarch64 libzstd-1.5.6-1.fc41.aarch64 lua-libs-5.4.6-5.fc40.aarch64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.aarch64 mpfr-4.2.1-4.fc41.aarch64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.aarch64 ocaml-srpm-macros-10-1.fc41.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.8-1.fc41.aarch64 openssl-libs-1:3.2.1-6.fc41.aarch64 p11-kit-0.25.3-4.fc40.aarch64 p11-kit-trust-0.25.3-4.fc40.aarch64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-3.fc41.aarch64 pam-libs-1.6.1-3.fc41.aarch64 patch-2.7.6-24.fc40.aarch64 pcre2-10.43-2.fc41.1.aarch64 pcre2-syntax-10.43-2.fc41.1.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.1-1.fc41.aarch64 pkgconf-m4-2.1.1-1.fc41.noarch pkgconf-pkg-config-2.1.1-1.fc41.aarch64 popt-1.19-6.fc40.aarch64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.1-1.fc41.noarch readline-8.2-8.fc40.aarch64 redhat-rpm-config-291-1.fc41.noarch rpm-4.19.91-4.fc41.aarch64 rpm-build-4.19.91-4.fc41.aarch64 rpm-build-libs-4.19.91-4.fc41.aarch64 rpm-libs-4.19.91-4.fc41.aarch64 rpm-sequoia-1.6.0-3.fc41.aarch64 rust-srpm-macros-26.3-1.fc41.noarch sed-4.9-1.fc40.aarch64 setup-2.15.0-3.fc41.noarch shadow-utils-2:4.15.1-5.fc41.aarch64 sqlite-libs-3.45.3-1.fc41.aarch64 systemd-libs-256~rc3-3.fc41.aarch64 tar-2:1.35-3.fc40.aarch64 unzip-6.0-63.fc40.aarch64 util-linux-2.40.1-1.fc41.aarch64 util-linux-core-2.40.1-1.fc41.aarch64 which-2.21-41.fc40.aarch64 xxhash-libs-0.8.2-2.fc40.aarch64 xz-1:5.4.6-3.fc41.aarch64 xz-libs-1:5.4.6-3.fc41.aarch64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.aarch64 zlib-ng-compat-2.1.6-4.fc41.aarch64 zstd-1.5.6-1.fc41.aarch64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-nopython-0.2.0-9.fc41.aarch64 alternatives-1.27-1.fc41.aarch64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-2.fc41.aarch64 authselect-1.5.0-5.fc41.aarch64 authselect-libs-1.5.0-5.fc41.aarch64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.aarch64 binutils-2.42.50-11.fc41.aarch64 binutils-gold-2.42.50-11.fc41.aarch64 build-reproducibility-srpm-macros-0.2.0-9.fc41.noarch bzip2-1.0.8-18.fc40.aarch64 bzip2-libs-1.0.8-18.fc40.aarch64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.aarch64 coreutils-common-9.5-1.fc41.aarch64 cpio-2.15-1.fc40.aarch64 cracklib-2.9.11-5.fc40.aarch64 crypto-policies-20240521-1.gitf71d135.fc41.noarch curl-8.8.0-1.fc41.aarch64 cyrus-sasl-lib-2.1.28-22.fc41.aarch64 debugedit-5.0-16.fc41.aarch64 diffutils-3.10-5.fc40.aarch64 dwz-0.15-6.fc40.aarch64 ed-1.20.2-1.fc41.aarch64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.aarch64 elfutils-debuginfod-client-0.191-7.fc41.aarch64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.aarch64 elfutils-libs-0.191-7.fc41.aarch64 fedora-gpg-keys-41-0.2.noarch fedora-release-41-0.13.noarch fedora-release-common-41-0.13.noarch fedora-release-identity-basic-41-0.13.noarch fedora-repos-41-0.2.noarch fedora-repos-rawhide-41-0.2.noarch file-5.45-5.fc41.aarch64 file-libs-5.45-5.fc41.aarch64 filesystem-3.18-9.fc41.aarch64 findutils-4.9.0-8.fc40.aarch64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.aarch64 gdb-minimal-14.2-9.fc41.aarch64 gdbm-1.23-6.fc40.aarch64 gdbm-libs-1.23-6.fc40.aarch64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-18.fc41.aarch64 glibc-common-2.39.9000-18.fc41.aarch64 glibc-gconv-extra-2.39.9000-18.fc41.aarch64 glibc-minimal-langpack-2.39.9000-18.fc41.aarch64 gmp-6.3.0-1.fc41.aarch64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-8.fc41.aarch64 gzip-1.13-1.fc40.aarch64 info-7.1-2.fc40.aarch64 jansson-2.13.1-9.fc40.aarch64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.aarch64 krb5-libs-1.21.2-5.fc40.aarch64 libacl-2.3.2-1.fc40.aarch64 libarchive-3.7.4-1.fc41.aarch64 libattr-2.5.2-3.fc40.aarch64 libblkid-2.40.1-1.fc41.aarch64 libbrotli-1.1.0-3.fc40.aarch64 libcap-2.70-1.fc41.aarch64 libcap-ng-0.8.5-1.fc41.aarch64 libcom_err-1.47.0-5.fc40.aarch64 libcurl-8.8.0-1.fc41.aarch64 libeconf-0.6.2-2.fc41.aarch64 libevent-2.1.12-13.fc41.aarch64 libfdisk-2.40.1-1.fc41.aarch64 libffi-3.4.6-1.fc41.aarch64 libgcc-14.1.1-4.fc41.aarch64 libgomp-14.1.1-4.fc41.aarch64 libidn2-2.3.7-1.fc40.aarch64 libmount-2.40.1-1.fc41.aarch64 libnghttp2-1.62.0-1.fc41.aarch64 libnsl2-2.0.1-1.fc40.aarch64 libpkgconf-2.1.1-1.fc41.aarch64 libpsl-0.21.5-3.fc40.aarch64 libpwquality-1.4.5-9.fc40.aarch64 libselinux-3.6-4.fc40.aarch64 libsemanage-3.6-3.fc40.aarch64 libsepol-3.6-3.fc40.aarch64 libsmartcols-2.40.1-1.fc41.aarch64 libssh-0.10.6-6.fc41.aarch64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.1.1-4.fc41.aarch64 libtasn1-4.19.0-6.fc40.aarch64 libtirpc-1.3.4-1.rc3.fc41.aarch64 libtool-ltdl-2.4.7-10.fc40.aarch64 libunistring-1.1-7.fc41.aarch64 libutempter-1.2.1-13.fc40.aarch64 libuuid-2.40.1-1.fc41.aarch64 libverto-0.3.2-8.fc40.aarch64 libxcrypt-4.4.36-5.fc40.aarch64 libxml2-2.12.7-1.fc41.aarch64 libzstd-1.5.6-1.fc41.aarch64 lua-libs-5.4.6-5.fc40.aarch64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.aarch64 mpfr-4.2.1-4.fc41.aarch64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.aarch64 ocaml-srpm-macros-10-1.fc41.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.8-1.fc41.aarch64 openssl-libs-3.2.1-6.fc41.aarch64 p11-kit-0.25.3-4.fc40.aarch64 p11-kit-trust-0.25.3-4.fc40.aarch64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-3.fc41.aarch64 pam-libs-1.6.1-3.fc41.aarch64 patch-2.7.6-24.fc40.aarch64 pcre2-10.43-2.fc41.1.aarch64 pcre2-syntax-10.43-2.fc41.1.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.1-1.fc41.aarch64 pkgconf-m4-2.1.1-1.fc41.noarch pkgconf-pkg-config-2.1.1-1.fc41.aarch64 popt-1.19-6.fc40.aarch64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.1-1.fc41.noarch readline-8.2-8.fc40.aarch64 redhat-rpm-config-291-1.fc41.noarch rpm-4.19.91-4.fc41.aarch64 rpm-build-4.19.91-4.fc41.aarch64 rpm-build-libs-4.19.91-4.fc41.aarch64 rpm-libs-4.19.91-4.fc41.aarch64 rpm-sequoia-1.6.0-3.fc41.aarch64 rust-srpm-macros-26.3-1.fc41.noarch sed-4.9-1.fc40.aarch64 setup-2.15.0-3.fc41.noarch shadow-utils-4.15.1-5.fc41.aarch64 sqlite-libs-3.45.3-1.fc41.aarch64 systemd-libs-256~rc3-3.fc41.aarch64 tar-1.35-3.fc40.aarch64 unzip-6.0-63.fc40.aarch64 util-linux-2.40.1-1.fc41.aarch64 util-linux-core-2.40.1-1.fc41.aarch64 which-2.21-41.fc40.aarch64 xxhash-libs-0.8.2-2.fc40.aarch64 xz-5.4.6-3.fc41.aarch64 xz-libs-5.4.6-3.fc41.aarch64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.aarch64 zlib-ng-compat-2.1.6-4.fc41.aarch64 zstd-1.5.6-1.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1714003200 Wrote: /builddir/build/SRPMS/R-preprocessCore-1.58.0-7.fc41.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-39-aarch64-1717094236.441350/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-aarch64-1717094236.441350/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-aarch64-1717094236.441350/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-aarch64-1717094236.441350/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-mib7ubqx/R-preprocessCore/R-preprocessCore.spec) Config(child) 2 minutes 5 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-preprocessCore-1.58.0-7.fc41.src.rpm) Config(fedora-39-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-aarch64-bootstrap-1717094236.441350/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-aarch64-bootstrap-1717094236.441350/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-aarch64-1717094236.441350/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.aarch64 rpm-sequoia-1.6.0-1.fc39.aarch64 python3-dnf-4.20.0-1.fc41.noarch python3-dnf-plugins-core-4.7.0-1.fc41.noarch dnf5-5.2.2.0-1.fc41.aarch64 Finish: chroot init Start: build phase for R-preprocessCore-1.58.0-7.fc41.src.rpm Start: build setup for R-preprocessCore-1.58.0-7.fc41.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1714003200 Wrote: /builddir/build/SRPMS/R-preprocessCore-1.58.0-7.fc41.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 75 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 92 kB/s | 3.8 kB 00:00 fedora 212 kB/s | 15 kB 00:00 updates 75 kB/s | 12 kB 00:00 Dependencies resolved. ====================================================================================================================================================== Package Arch Version Repository Size ====================================================================================================================================================== Installing: R-core aarch64 4.4.0-1.fc41 copr_base 62 M R-devel aarch64 4.4.0-1.fc41 copr_base 11 k autoconf noarch 2.72-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 817 k automake noarch 1.16.5-16.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 676 k gcc aarch64 14.1.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 34 M libtool aarch64 2.4.7-10.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 595 k texlive-collection-latexrecommended noarch 11:svn65512-71.fc40 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Running transaction test Transaction test succeeded. 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fribidi-1.0.14-1.fc41.aarch64 652/692 Installing : pango-1.52.2-1.fc41.aarch64 653/692 Installing : R-core-4.4.0-1.fc41.aarch64 654/692 Installing : R-rpm-macros-1.2.1-10.fc41.noarch 655/692 Installing : dbus-libs-1:1.14.10-3.fc40.aarch64 656/692 Installing : avahi-libs-0.8-26.fc40.aarch64 657/692 Installing : cups-libs-1:2.4.8-4.fc41.aarch64 658/692 Installing : cmake-filesystem-3.28.3-4.fc41.aarch64 659/692 Installing : libxml2-devel-2.12.7-1.fc41.aarch64 660/692 Installing : brotli-1.1.0-3.fc40.aarch64 661/692 Installing : brotli-devel-1.1.0-3.fc40.aarch64 662/692 Installing : cairo-devel-1.18.0-3.fc40.aarch64 663/692 Installing : fontconfig-devel-2.15.0-5.fc41.aarch64 664/692 Installing : freetype-devel-2.13.2-5.fc40.aarch64 665/692 Installing : harfbuzz-devel-8.4.0-1.fc41.aarch64 666/692 Installing : libXft-devel-2.3.8-6.fc40.aarch64 667/692 Installing : tk-devel-1:8.6.14-1.fc41.aarch64 668/692 Installing : annobin-docs-12.54-2.fc41.noarch 669/692 Installing : 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Running scriptlet: java-21-openjdk-devel-1:21.0.3.0.9-1.fc41.aarch6 692/692 Running scriptlet: add-determinism-0.2.0-9.fc41.aarch64 692/692 Installed: R-core-4.4.0-1.fc41.aarch64 R-core-devel-4.4.0-1.fc41.aarch64 R-devel-4.4.0-1.fc41.aarch64 R-java-4.4.0-1.fc41.aarch64 R-java-devel-4.4.0-1.fc41.aarch64 R-rpm-macros-1.2.1-10.fc41.noarch abattis-cantarell-vf-fonts-0.301-12.fc40.noarch add-determinism-0.2.0-9.fc41.aarch64 adobe-mappings-cmap-20230622-3.fc40.noarch adobe-mappings-cmap-deprecated-20230622-3.fc40.noarch adobe-mappings-pdf-20190401-7.fc40.noarch alsa-lib-1.2.11-2.fc40.aarch64 annobin-docs-12.54-2.fc41.noarch annobin-plugin-gcc-12.54-2.fc41.aarch64 autoconf-2.72-2.fc41.noarch automake-1.16.5-16.fc40.noarch avahi-libs-0.8-26.fc40.aarch64 biber-2.19-5.fc40.noarch brotli-1.1.0-3.fc40.aarch64 brotli-devel-1.1.0-3.fc40.aarch64 bzip2-devel-1.0.8-18.fc40.aarch64 cairo-1.18.0-3.fc40.aarch64 cairo-devel-1.18.0-3.fc40.aarch64 cmake-filesystem-3.28.3-4.fc41.aarch64 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texlive-euenc-11:svn19795.0.1h-71.fc40.noarch texlive-euler-11:svn42428-71.fc40.noarch texlive-everysel-11:svn57489-71.fc40.noarch texlive-everyshi-11:svn57001-71.fc40.noarch texlive-extsizes-11:svn17263.1.4a-71.fc40.noarch texlive-fancybox-11:svn18304.1.4-71.fc40.noarch texlive-fancyhdr-11:svn64977-71.fc40.noarch texlive-fancyref-11:svn15878.0.9c-71.fc40.noarch texlive-fancyvrb-11:svn65585-71.fc40.noarch texlive-filecontents-11:svn52142-71.fc40.noarch texlive-filehook-11:svn64822-71.fc40.noarch texlive-finstrut-11:svn21719.0.5-71.fc40.noarch texlive-firstaid-11:svn64892-71.fc40.noarch texlive-fix2col-11:svn38770-71.fc40.noarch texlive-float-11:svn15878.1.3d-71.fc40.noarch texlive-fontspec-11:svn63386-71.fc40.noarch texlive-footmisc-11:svn62524-71.fc40.noarch texlive-footnotehyper-11:svn60374-71.fc40.noarch texlive-fp-11:svn49719-71.fc40.noarch texlive-fpl-11:svn54512-71.fc40.noarch texlive-geometry-11:svn61719-71.fc40.noarch texlive-gettitlestring-11:svn53170-71.fc40.noarch texlive-glyphlist-11:svn54074-84.fc41.noarch texlive-graphics-11:svn66204-71.fc40.noarch texlive-graphics-cfg-11:svn41448-71.fc40.noarch texlive-graphics-def-11:svn64487-71.fc40.noarch texlive-grfext-11:svn53024-71.fc40.noarch texlive-grffile-11:svn52756-71.fc40.noarch texlive-gsftopk-11:svn52851-84.fc41.aarch64 texlive-helvetic-11:svn61719-71.fc40.noarch texlive-hobsub-11:svn52810-71.fc40.noarch texlive-hologo-11:svn61719-71.fc40.noarch texlive-hopatch-11:svn65491-71.fc40.noarch texlive-hycolor-11:svn53584-71.fc40.noarch texlive-hypdoc-11:svn65678-71.fc40.noarch texlive-hyperref-11:svn65758-71.fc40.noarch texlive-hyph-utf8-11:svn61719-71.fc40.noarch texlive-hyphen-base-11:svn66413-71.fc40.noarch texlive-hyphenex-11:svn57387-71.fc40.noarch texlive-ifmtarg-11:svn47544-71.fc40.noarch texlive-ifplatform-11:svn45533-71.fc40.noarch texlive-iftex-11:svn61910-71.fc40.noarch texlive-index-11:svn24099.4.1beta-71.fc40.noarch texlive-infwarerr-11:svn53023-71.fc40.noarch texlive-intcalc-11:svn53168-71.fc40.noarch texlive-jknapltx-11:svn19440.0-71.fc40.noarch texlive-kastrup-11:svn15878.0-71.fc40.noarch texlive-knuth-lib-11:svn57963-71.fc40.noarch texlive-knuth-local-11:svn57963-71.fc40.noarch texlive-koma-script-11:svn64685-71.fc40.noarch texlive-kpathsea-11:svn66209-84.fc41.aarch64 texlive-kvdefinekeys-11:svn53193-71.fc40.noarch texlive-kvoptions-11:svn63622-71.fc40.noarch texlive-kvsetkeys-11:svn64632-71.fc40.noarch texlive-l3backend-11:svn65573-71.fc40.noarch texlive-l3experimental-11:svn65621-71.fc40.noarch texlive-l3kernel-11:svn66094-71.fc40.noarch texlive-l3packages-11:svn65722-71.fc40.noarch texlive-latex-11:svn65161-84.fc41.noarch texlive-latex-fonts-11:svn28888.0-71.fc40.noarch texlive-latex-lab-11:svn64892-71.fc40.noarch texlive-latexbug-11:svn63596-71.fc40.noarch texlive-latexconfig-11:svn53525-71.fc40.noarch texlive-letltxmacro-11:svn53022-71.fc40.noarch texlive-lib-11:20230311-84.fc41.aarch64 texlive-lineno-11:svn65586-71.fc40.noarch texlive-listings-11:svn66222-71.fc40.noarch texlive-lm-11:svn65956-71.fc40.noarch texlive-lm-math-11:svn36915.1.959-71.fc40.noarch texlive-logreq-11:svn53003-71.fc40.noarch texlive-ltabptch-11:svn17533.1.74d-71.fc40.noarch texlive-ltxcmds-11:svn56421-71.fc40.noarch texlive-ltxmisc-11:svn21927.0-71.fc40.noarch texlive-lua-alt-getopt-11:svn56414-71.fc40.noarch texlive-lua-uni-algos-11:svn62204-71.fc40.noarch texlive-luabidi-11:svn54512-71.fc40.noarch texlive-luahbtex-11:svn66186-84.fc41.aarch64 texlive-lualatex-math-11:svn61464-71.fc40.noarch texlive-lualibs-11:svn64615-71.fc40.noarch texlive-luaotfload-11:svn64616-84.fc41.noarch texlive-luatex-11:svn66967-84.fc41.aarch64 texlive-luatexbase-11:svn52663-71.fc40.noarch texlive-lwarp-11:svn66259-84.fc41.noarch texlive-makecmds-11:svn15878.0-71.fc40.noarch texlive-makeindex-11:svn62517-84.fc41.aarch64 texlive-marginnote-11:svn48383-71.fc40.noarch texlive-marvosym-11:svn29349.2.2a-71.fc40.noarch texlive-mathpazo-11:svn52663-71.fc40.noarch texlive-mathspec-11:svn42773-71.fc40.noarch texlive-mathtools-11:svn63767-71.fc40.noarch texlive-mdwtools-11:svn15878.1.05.4-71.fc40.noarch texlive-memoir-11:svn65040-71.fc40.noarch texlive-metafont-11:svn66186-84.fc41.aarch64 texlive-metalogo-11:svn18611.0.12-71.fc40.noarch texlive-mflogo-11:svn42428-71.fc40.noarch texlive-mfnfss-11:svn46036-71.fc40.noarch texlive-mfware-11:svn66186-84.fc41.aarch64 texlive-microtype-11:svn66587-71.fc40.noarch texlive-minitoc-11:svn61719-71.fc40.noarch texlive-mnsymbol-11:svn18651.1.4-71.fc40.noarch texlive-modes-11:svn61719-71.fc40.noarch texlive-mparhack-11:svn59066-71.fc40.noarch texlive-mptopdf-11:svn65952-84.fc41.noarch texlive-ms-11:svn57473-71.fc40.noarch texlive-multido-11:svn18302.1.42-71.fc40.noarch texlive-natbib-11:svn20668.8.31b-71.fc40.noarch texlive-newfloat-11:svn52906-71.fc40.noarch texlive-notoccite-11:svn18129.0-71.fc40.noarch texlive-ntgclass-11:svn65522-71.fc40.noarch texlive-oberdiek-11:svn65521-84.fc41.noarch texlive-pagesel-11:svn56105-71.fc40.noarch texlive-palatino-11:svn61719-71.fc40.noarch texlive-paralist-11:svn43021-71.fc40.noarch texlive-parallel-11:svn15878.0-71.fc40.noarch texlive-parskip-11:svn58358-71.fc40.noarch texlive-pdfcol-11:svn64469-71.fc40.noarch texlive-pdfcolfoot-11:svn65512-71.fc40.noarch texlive-pdfcolmk-11:svn52912-71.fc40.noarch texlive-pdfescape-11:svn53082-71.fc40.noarch texlive-pdflscape-11:svn64851-71.fc40.noarch texlive-pdfmanagement-testphase-11:svn66532-71.fc40.noarch texlive-pdfpages-11:svn65319-71.fc40.noarch texlive-pdftex-11:svn66243-84.fc41.aarch64 texlive-pdftexcmds-11:svn55777-71.fc40.noarch texlive-pgf-11:svn65553-71.fc40.noarch texlive-picture-11:svn54867-71.fc40.noarch texlive-placeins-11:svn19848.2.2-71.fc40.noarch texlive-plain-11:svn57963-71.fc40.noarch texlive-polyglossia-11:svn65792-71.fc40.noarch texlive-psfrag-11:svn15878.3.04-71.fc40.noarch texlive-pslatex-11:svn57434-71.fc40.noarch texlive-psnfss-11:svn54694-71.fc40.noarch texlive-pspicture-11:svn15878.0-71.fc40.noarch texlive-pst-3d-11:svn17257.1.10-71.fc40.noarch texlive-pst-coil-11:svn62977-71.fc40.noarch texlive-pst-eps-11:svn15878.1.0-71.fc40.noarch texlive-pst-fill-11:svn60671-71.fc40.noarch texlive-pst-grad-11:svn15878.1.06-71.fc40.noarch texlive-pst-math-11:svn64732-71.fc40.noarch texlive-pst-node-11:svn61838-71.fc40.noarch texlive-pst-ovl-11:svn54963-71.fc40.noarch texlive-pst-plot-11:svn65346-71.fc40.noarch texlive-pst-text-11:svn49542-71.fc40.noarch texlive-pst-tools-11:svn60621-71.fc40.noarch texlive-pst-tree-11:svn60421-71.fc40.noarch texlive-pstricks-11:svn65346-71.fc40.noarch texlive-pstricks-add-11:svn65067-71.fc40.noarch texlive-ragged2e-11:svn66152-71.fc40.noarch texlive-rcs-11:svn15878.0-71.fc40.noarch texlive-realscripts-11:svn56594-71.fc40.noarch texlive-refcount-11:svn53164-71.fc40.noarch texlive-rerunfilecheck-11:svn63869-71.fc40.noarch texlive-rsfs-11:svn15878.0-71.fc40.noarch texlive-sansmath-11:svn17997.1.1-71.fc40.noarch texlive-sansmathaccent-11:svn53628-71.fc40.noarch texlive-sauerj-11:svn15878.0-71.fc40.noarch texlive-section-11:svn20180.0-71.fc40.noarch texlive-seminar-11:svn59801-71.fc40.noarch texlive-sepnum-11:svn20186.2.0-71.fc40.noarch texlive-setspace-11:svn65206-71.fc40.noarch texlive-showexpl-11:svn57414-71.fc40.noarch texlive-stringenc-11:svn52982-71.fc40.noarch texlive-subfig-11:svn15878.1.3-71.fc40.noarch texlive-symbol-11:svn61719-71.fc40.noarch texlive-tex-11:svn66186-84.fc41.aarch64 texlive-tex-ini-files-11:svn40533-71.fc40.noarch texlive-texlive-common-doc-11:svn54176-71.fc40.noarch texlive-texlive-en-11:svn66572-84.fc41.noarch texlive-texlive-msg-translations-11:svn66593-71.fc40.noarch texlive-texlive-scripts-11:svn66584-84.fc41.noarch texlive-texlive.infra-11:svn66512-84.fc41.noarch texlive-textcase-11:svn63868-71.fc40.noarch texlive-thumbpdf-11:svn62518-84.fc41.noarch texlive-times-11:svn61719-71.fc40.noarch texlive-tipa-11:svn29349.1.3-71.fc40.noarch texlive-titlesec-11:svn59845-71.fc40.noarch texlive-tools-11:svn64892-71.fc40.noarch texlive-translator-11:svn59412-71.fc40.noarch texlive-transparent-11:svn64852-71.fc40.noarch texlive-typehtml-11:svn17134.0-71.fc40.noarch texlive-ucharcat-11:svn38907-71.fc40.noarch texlive-ucs-11:svn64114-71.fc40.noarch texlive-underscore-11:svn18261.0-71.fc40.noarch texlive-unicode-data-11:svn64423-71.fc40.noarch texlive-unicode-math-11:svn61719-71.fc40.noarch texlive-uniquecounter-11:svn53162-71.fc40.noarch texlive-url-11:svn32528.3.4-71.fc40.noarch texlive-utopia-11:svn15878.0-71.fc40.noarch texlive-varwidth-11:svn24104.0.92-71.fc40.noarch texlive-xcolor-11:svn63563-71.fc40.noarch texlive-xdvi-11:svn62387-84.fc41.aarch64 texlive-xetex-11:svn66203-84.fc41.aarch64 texlive-xetexconfig-11:svn45845-71.fc40.noarch texlive-xifthen-11:svn38929-71.fc40.noarch texlive-xkeyval-11:svn63616-71.fc40.noarch texlive-xltxtra-11:svn56594-71.fc40.noarch texlive-xpatch-11:svn54563-71.fc40.noarch texlive-xstring-11:svn65551-71.fc40.noarch texlive-xunicode-11:svn30466.0.981-71.fc40.noarch texlive-zapfding-11:svn61719-71.fc40.noarch texlive-zref-11:svn62977-71.fc40.noarch tk-1:8.6.14-1.fc41.aarch64 tk-devel-1:8.6.14-1.fc41.aarch64 tre-0.8.0-43.20140228gitc2f5d13.fc40.aarch64 tre-common-0.8.0-43.20140228gitc2f5d13.fc40.noarch tre-devel-0.8.0-43.20140228gitc2f5d13.fc40.aarch64 ttmkfdir-3.0.9-70.fc40.aarch64 tzdata-2024a-8.fc41.noarch tzdata-java-2024a-8.fc41.noarch urw-base35-bookman-fonts-20200910-22.fc41.noarch urw-base35-c059-fonts-20200910-22.fc41.noarch urw-base35-d050000l-fonts-20200910-22.fc41.noarch urw-base35-fonts-20200910-22.fc41.noarch urw-base35-fonts-common-20200910-22.fc41.noarch urw-base35-gothic-fonts-20200910-22.fc41.noarch urw-base35-nimbus-mono-ps-fonts-20200910-22.fc41.noarch urw-base35-nimbus-roman-fonts-20200910-22.fc41.noarch urw-base35-nimbus-sans-fonts-20200910-22.fc41.noarch urw-base35-p052-fonts-20200910-22.fc41.noarch urw-base35-standard-symbols-ps-fonts-20200910-22.fc41.noarch urw-base35-z003-fonts-20200910-22.fc41.noarch xdg-utils-1.2.1-1.fc41.noarch xml-common-0.6.3-63.fc40.noarch xorg-x11-fonts-Type1-7.5-38.fc40.noarch xorg-x11-proto-devel-2024.1-2.fc41.noarch xpdf-libs-1:4.05-4.fc41.aarch64 xz-devel-1:5.4.6-3.fc41.aarch64 zlib-ng-compat-devel-2.1.6-4.fc41.aarch64 zziplib-0.13.72-6.fc40.aarch64 Complete! Finish: build setup for R-preprocessCore-1.58.0-7.fc41.src.rpm Start: rpmbuild R-preprocessCore-1.58.0-7.fc41.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1714003200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.Y7hukU + umask 022 + cd /builddir/build/BUILD/R-preprocessCore-1.58.0-build + test -d /builddir/build/BUILD/R-preprocessCore-1.58.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-preprocessCore-1.58.0-build + /usr/bin/rm -rf /builddir/build/BUILD/R-preprocessCore-1.58.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-preprocessCore-1.58.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-preprocessCore-1.58.0-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.mQAOE8 + umask 022 + cd /builddir/build/BUILD/R-preprocessCore-1.58.0-build + cd /builddir/build/BUILD/R-preprocessCore-1.58.0-build + rm -rf preprocessCore + /usr/bin/mkdir -p preprocessCore + cd preprocessCore + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/preprocessCore_1.58.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (R-preprocessCore-dlsym-pthread_get_minstack-fix.patch):' Patch #0 (R-preprocessCore-dlsym-pthread_get_minstack-fix.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .dlsym --fuzz=0 patching file preprocessCore/configure.in patching file preprocessCore/src/qnorm.c Hunk #1 succeeded at 100 (offset 2 lines). Hunk #2 succeeded at 512 (offset 2 lines). Hunk #3 succeeded at 1634 (offset 2 lines). Hunk #4 succeeded at 1937 (offset 2 lines). Hunk #5 succeeded at 2542 (offset 2 lines). Hunk #6 succeeded at 3057 (offset 2 lines). patching file preprocessCore/src/rma_background4.c patching file preprocessCore/src/R_subColSummarize.c patching file preprocessCore/src/R_subrcModel_interfaces.c + pushd preprocessCore ~/build/BUILD/R-preprocessCore-1.58.0-build/preprocessCore/preprocessCore ~/build/BUILD/R-preprocessCore-1.58.0-build/preprocessCore + autoreconf -ifv . autoreconf: export WARNINGS= autoreconf: warning: autoconf input should be named 'configure.ac', not 'configure.in' autoreconf: Entering directory '.' autoreconf: configure.in: not using Gettext autoreconf: running: aclocal --force aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' autoreconf: configure.in: tracing autoreconf: configure.in: not using Libtool autoreconf: configure.in: not using Intltool autoreconf: configure.in: not using Gtkdoc autoreconf: running: /usr/bin/autoconf --force configure.in:34: warning: The macro 'AC_HEADER_STDC' is obsolete. configure.in:34: You should run autoupdate. ./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from... configure.in:34: the top level configure.in:97: warning: AC_OUTPUT should be used without arguments. configure.in:97: You should run autoupdate. autoreconf: configure.in: not using Autoheader autoreconf: configure.in: not using Automake autoreconf: Leaving directory '.' + popd ~/build/BUILD/R-preprocessCore-1.58.0-build/preprocessCore + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.F3mo3X + umask 022 + cd /builddir/build/BUILD/R-preprocessCore-1.58.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd preprocessCore + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.0h5VGp + umask 022 + cd /builddir/build/BUILD/R-preprocessCore-1.58.0-build + '[' /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/R-preprocessCore-1.58.0-build + mkdir /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd preprocessCore + mkdir -p /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT/usr/lib64/R/library + R CMD INSTALL preprocessCore -l /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT/usr/lib64/R/library * installing *source* package ‘preprocessCore’ ... ** using staged installation 'config' variable 'CPP' is defunct checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking how to run the C preprocessor... gcc -E checking for library containing pthread_create... none required checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for stdlib.h... (cached) yes checking if PTHREAD_STACK_MIN is defined... yes checking for dlfcn.h... yes checking for library containing dlsym... none required checking if R is using flexiblas... flexiblas found. preprocessCore specific threading will be disabled configure: ------------------------------------------ configure: Unable to find pthreads on this system. configure: Building a single-threaded version. configure: ------------------------------------------ configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc (GCC) 14.1.1 20240522 (Red Hat 14.1.1-4)’ gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c R_colSummarize.c -o R_colSummarize.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c R_plmd_interfaces.c -o R_plmd_interfaces.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c R_plmr_interfaces.c -o R_plmr_interfaces.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c R_rlm_interfaces.c -o R_rlm_interfaces.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c R_subColSummarize.c -o R_subColSummarize.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c R_subrcModel_interfaces.c -o R_subrcModel_interfaces.o R_subrcModel_interfaces.c: In function ‘R_sub_rcModelSummarize_medianpolish’: R_subrcModel_interfaces.c:217:11: warning: unused variable ‘se’ [-Wunused-variable] 217 | double *se; | ^~ R_subrcModel_interfaces.c:216:11: warning: unused variable ‘weights’ [-Wunused-variable] 216 | double *weights; | ^~~~~~~ R_subrcModel_interfaces.c:169:30: warning: unused variable ‘buffer2’ [-Wunused-variable] 169 | double *results, *buffer, *buffer2; | ^~~~~~~ R_subrcModel_interfaces.c:169:21: warning: unused variable ‘buffer’ [-Wunused-variable] 169 | double *results, *buffer, *buffer2; | ^~~~~~ R_subrcModel_interfaces.c:169:11: warning: unused variable ‘results’ [-Wunused-variable] 169 | double *results, *buffer, *buffer2; | ^~~~~~~ R_subrcModel_interfaces.c: In function ‘R_sub_rcModelSummarize_plm’: R_subrcModel_interfaces.c:548:10: warning: unused variable ‘scale’ [-Wunused-variable] 548 | double scale=-1.0; | ^~~~~ R_subrcModel_interfaces.c:495:30: warning: unused variable ‘buffer2’ [-Wunused-variable] 495 | double *results, *buffer, *buffer2; | ^~~~~~~ R_subrcModel_interfaces.c:495:21: warning: unused variable ‘buffer’ [-Wunused-variable] 495 | double *results, *buffer, *buffer2; | ^~~~~~ R_subrcModel_interfaces.c:495:11: warning: unused variable ‘results’ [-Wunused-variable] 495 | double *results, *buffer, *buffer2; | ^~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c avg.c -o avg.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c avg_log.c -o avg_log.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c biweight.c -o biweight.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init_package.c -o init_package.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lm.c -o lm.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c log_avg.c -o log_avg.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c log_median.c -o log_median.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c matrix_functions.c -o matrix_functions.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c median.c -o median.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c median_log.c -o median_log.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c medianpolish.c -o medianpolish.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plmd.c -o plmd.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plmr.c -o plmr.o plmr.c:279:13: warning: ‘XTWX_R_inv’ defined but not used [-Wunused-function] 279 | static void XTWX_R_inv(int *rows, int *cols, double *xtwx){ | ^~~~~~~~~~ plmr.c:152:13: warning: ‘XTWX_R’ defined but not used [-Wunused-function] 152 | static void XTWX_R(int *rows, int *cols, double *out_weights, double *xtwx){ | ^~~~~~ plmr.c:82:13: warning: ‘XTWY_R’ defined but not used [-Wunused-function] 82 | static void XTWY_R(int *rows, int *cols, double *out_weights, double *y,double *xtwy){ | ^~~~~~ gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c psi_fns.c -o psi_fns.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnorm.c -o qnorm.o qnorm.c: In function ‘qnorm_c_determine_target_l’: qnorm.c:1927:7: warning: unused variable ‘non_na’ [-Wunused-variable] 1927 | int non_na; | ^~~~~~ qnorm.c:1922:12: warning: unused variable ‘j’ [-Wunused-variable] 1922 | size_t i,j,row_mean_ind; | ^ qnorm.c: In function ‘qnorm_c_determine_target_via_subset_l’: qnorm.c:2532:7: warning: unused variable ‘non_na’ [-Wunused-variable] 2532 | int non_na; | ^~~~~~ qnorm.c:2527:12: warning: unused variable ‘j’ [-Wunused-variable] 2527 | size_t i,j,row_mean_ind; | ^ qnorm.c: In function ‘using_target_via_subset_part1’: qnorm.c:2754:14: warning: variable ‘ind’ set but not used [-Wunused-but-set-variable] 2754 | size_t i,j,ind,target_ind; | ^~~ qnorm.c: In function ‘using_target_via_subset_part2’: qnorm.c:2853:11: warning: unused variable ‘datvec’ [-Wunused-variable] 2853 | double *datvec; | ^~~~~~ qnorm.c:2852:11: warning: unused variable ‘sample_percentiles’ [-Wunused-variable] 2852 | double *sample_percentiles; | ^~~~~~~~~~~~~~~~~~ qnorm.c: In function ‘using_target_via_subset’: qnorm.c:3002:11: warning: unused variable ‘datvec’ [-Wunused-variable] 3002 | double *datvec; | ^~~~~~ qnorm.c:3001:11: warning: unused variable ‘sample_percentiles’ [-Wunused-variable] 3001 | double *sample_percentiles; | ^~~~~~~~~~~~~~~~~~ qnorm.c:2997:7: warning: unused variable ‘non_na’ [-Wunused-variable] 2997 | int non_na = 0; | ^~~~~~ qnorm.c:2996:7: warning: unused variable ‘targetnon_na’ [-Wunused-variable] 2996 | int targetnon_na = targetrows; | ^~~~~~~~~~~~ qnorm.c:2994:28: warning: unused variable ‘target_ind_double_floor’ [-Wunused-variable] 2994 | double target_ind_double,target_ind_double_floor; | ^~~~~~~~~~~~~~~~~~~~~~~ qnorm.c:2994:10: warning: unused variable ‘target_ind_double’ [-Wunused-variable] 2994 | double target_ind_double,target_ind_double_floor; | ^~~~~~~~~~~~~~~~~ qnorm.c:2993:10: warning: unused variable ‘samplepercentile’ [-Wunused-variable] 2993 | double samplepercentile; | ^~~~~~~~~~~~~~~~ qnorm.c:2992:11: warning: unused variable ‘ranks’ [-Wunused-variable] 2992 | double *ranks = (double *)Calloc((rows),double); | ^~~~~ qnorm.c:2990:11: warning: unused variable ‘row_mean’ [-Wunused-variable] 2990 | double *row_mean = target; | ^~~~~~~~ qnorm.c:2988:14: warning: unused variable ‘dimat’ [-Wunused-variable] 2988 | dataitem **dimat; | ^~~~~ qnorm.c:2986:18: warning: unused variable ‘target_ind’ [-Wunused-variable] 2986 | size_t i,j,ind,target_ind; | ^~~~~~~~~~ qnorm.c:2986:14: warning: unused variable ‘ind’ [-Wunused-variable] 2986 | size_t i,j,ind,target_ind; | ^~~ qnorm.c:2986:12: warning: unused variable ‘j’ [-Wunused-variable] 2986 | size_t i,j,ind,target_ind; | ^ qnorm.c: In function ‘R_qnorm_using_target’: qnorm.c:2138:3: warning: ‘target_rows’ may be used uninitialized [-Wmaybe-uninitialized] 2138 | qnorm_c_using_target_l(Xptr, rows, cols ,targetptr, target_rows); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qnorm.c:2106:10: note: ‘target_rows’ was declared here 2106 | size_t target_rows, target_cols; | ^~~~~~~~~~~ qnorm.c: In function ‘R_qnorm_using_target_via_subset’: qnorm.c:3277:3: warning: ‘target_rows’ may be used uninitialized [-Wmaybe-uninitialized] 3277 | qnorm_c_using_target_via_subset_l(Xptr, rows, cols, subsetptr, targetptr, target_rows); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qnorm.c:3244:10: note: ‘target_rows’ was declared here 3244 | size_t target_rows, target_cols; | ^~~~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rlm.c -o rlm.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rlm_anova.c -o rlm_anova.o rlm_anova.c: In function ‘rlm_fit_anova_given_probe_effects_engine’: rlm_anova.c:1235:10: warning: unused variable ‘endprobe’ [-Wunused-variable] 1235 | double endprobe; | ^~~~~~~~ rlm_anova.c: In function ‘rlm_compute_se_anova_given_probe_effects’: rlm_anova.c:1426:19: warning: unused variable ‘varderivpsi’ [-Wunused-variable] 1426 | double vs=0.0,m,varderivpsi=0.0; | ^~~~~~~~~~~ rlm_anova.c:1426:17: warning: unused variable ‘m’ [-Wunused-variable] 1426 | double vs=0.0,m,varderivpsi=0.0; | ^ rlm_anova.c:1426:10: warning: unused variable ‘vs’ [-Wunused-variable] 1426 | double vs=0.0,m,varderivpsi=0.0; | ^~ rlm_anova.c:1419:10: warning: unused variable ‘scale’ [-Wunused-variable] 1419 | double scale=0.0; | ^~~~~ rlm_anova.c:1418:10: warning: unused variable ‘Kappa’ [-Wunused-variable] 1418 | double Kappa=0.0; /* A correction factor */ | ^~~~~ rlm_anova.c:1417:10: warning: unused variable ‘sumderivpsi’ [-Wunused-variable] 1417 | double sumderivpsi=0.0; /* sum of psi'(r_i) */ | ^~~~~~~~~~~ rlm_anova.c:1415:10: warning: unused variable ‘sumpsi2’ [-Wunused-variable] 1415 | double sumpsi2=0.0; /* sum of psi(r_i)^2 */ | ^~~~~~~ rlm_anova.c:1414:10: warning: unused variable ‘k1’ [-Wunused-variable] 1414 | double k1 = psi_k; /* was 1.345; */ | ^~ rlm_anova.c: In function ‘rlm_wfit_anova_given_probe_effects_engine’: rlm_anova.c:1505:10: warning: unused variable ‘endprobe’ [-Wunused-variable] 1505 | double endprobe; | ^~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rlm_se.c -o rlm_se.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rma_background4.c -o rma_background4.o rma_background4.c: In function ‘R_rma_bg_correct’: rma_background4.c:519:12: warning: ‘PMcopy’ may be used uninitialized [-Wmaybe-uninitialized] 519 | return PMcopy; | ^~~~~~ rma_background4.c:492:13: note: ‘PMcopy’ was declared here 492 | SEXP dim1,PMcopy; | ^~~~~~ gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rma_common.c -o rma_common.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDLIB_H=1 -DHAVE_DLFCN_H=1 -DHAS_DLSYM=1 -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c weightedkerneldensity.c -o weightedkerneldensity.o gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o preprocessCore.so R_colSummarize.o R_plmd_interfaces.o R_plmr_interfaces.o R_rlm_interfaces.o R_subColSummarize.o R_subrcModel_interfaces.o avg.o avg_log.o biweight.o init_package.o lm.o log_avg.o log_median.o matrix_functions.o median.o median_log.o medianpolish.o plmd.o plmr.o psi_fns.o qnorm.o rlm.o rlm_anova.o rlm_se.o rma_background4.o rma_common.o weightedkerneldensity.o -lflexiblas -lgfortran -lm -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT/usr/lib64/R/library/00LOCK-preprocessCore/00new/preprocessCore/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘preprocessCore’ finding HTML links ... done colSummarize html normalize.quantiles html normalize.quantiles.in.blocks html normalize.quantiles.robust html normalize.quantiles.target html rcModelPLMd html rcModelPLMr html rcModels html rma.background.correct html subColSummarize html subrcModels html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (preprocessCore) + test -d preprocessCore/src + cd preprocessCore/src + rm -f R_colSummarize.o R_plmd_interfaces.o R_plmr_interfaces.o R_rlm_interfaces.o R_subColSummarize.o R_subrcModel_interfaces.o avg.o avg_log.o biweight.o init_package.o lm.o log_avg.o log_median.o matrix_functions.o median.o median_log.o medianpolish.o plmd.o plmr.o psi_fns.o qnorm.o rlm.o rlm_anova.o rlm_se.o rma_background4.o rma_common.o weightedkerneldensity.o preprocessCore.so + rm -rf /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT/usr/lib64/R/library/R.css + install -m 664 -p /builddir/build/SOURCES/preprocessCore_license /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT/usr/lib64/R/library/preprocessCore + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 1.58.0-7.fc41 --unique-debug-suffix -1.58.0-7.fc41.aarch64 --unique-debug-src-base R-preprocessCore-1.58.0-7.fc41.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/R-preprocessCore-1.58.0-build/preprocessCore find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-preprocessCore-1.58.0-7.fc41.aarch64 958 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT Cannot initialize handler pyc: ModuleNotFoundError: No module named 'marshalparser' [src/multiprocess.rs:66:9] &cmd = Command { program: "/usr/bin/add-determinism", args: [ "/usr/bin/add-determinism", "--socket", "3", "--brp", "--handler", "ar,jar,javadoc", ], env: CommandEnv { clear: false, vars: { "SOURCE_DATE_EPOCH": Some( "1714003200", ), }, }, create_pidfd: false, } Bye! Bye! Bye! Bye! Reading /builddir/build/BUILD/R-preprocessCore-1.58.0-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.YQqxwW + umask 022 + cd /builddir/build/BUILD/R-preprocessCore-1.58.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd preprocessCore + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-preprocessCore-1.58.0-7.fc41.aarch64 Provides: R(preprocessCore) = 1.58.0 R-preprocessCore = 1.58.0-7.fc41 R-preprocessCore(aarch-64) = 1.58.0-7.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(ABI) = 4.4 R(stats) R-core ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libflexiblas.so.3()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) rtld(GNU_HASH) Processing files: R-preprocessCore-devel-1.58.0-7.fc41.aarch64 Provides: R-preprocessCore-devel = 1.58.0-7.fc41 R-preprocessCore-devel(aarch-64) = 1.58.0-7.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-preprocessCore-debugsource-1.58.0-7.fc41.aarch64 Provides: R-preprocessCore-debugsource = 1.58.0-7.fc41 R-preprocessCore-debugsource(aarch-64) = 1.58.0-7.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-preprocessCore-debuginfo-1.58.0-7.fc41.aarch64 Provides: R-preprocessCore-debuginfo = 1.58.0-7.fc41 R-preprocessCore-debuginfo(aarch-64) = 1.58.0-7.fc41 debuginfo(build-id) = a83921333c9e27aab3115f518233db2989f7e0cd Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-preprocessCore-debugsource(aarch-64) = 1.58.0-7.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/R-preprocessCore-1.58.0-build/BUILDROOT Wrote: /builddir/build/RPMS/R-preprocessCore-devel-1.58.0-7.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/R-preprocessCore-1.58.0-7.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/R-preprocessCore-debuginfo-1.58.0-7.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/R-preprocessCore-debugsource-1.58.0-7.fc41.aarch64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.XF9Yhk + umask 022 + cd /builddir/build/BUILD/R-preprocessCore-1.58.0-build + test -d /builddir/build/BUILD/R-preprocessCore-1.58.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-preprocessCore-1.58.0-build + rm -rf /builddir/build/BUILD/R-preprocessCore-1.58.0-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild R-preprocessCore-1.58.0-7.fc41.src.rpm Finish: build phase for R-preprocessCore-1.58.0-7.fc41.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-aarch64-1717094236.441350/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-aarch64-1717094236.441350/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-aarch64-1717094236.441350/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/R-preprocessCore-1.58.0-7.fc41.src.rpm) Config(child) 1 minutes 34 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-preprocessCore", "epoch": null, "version": "1.58.0", "release": "7.fc41", "arch": "aarch64" }, { "name": "R-preprocessCore-debuginfo", "epoch": null, "version": "1.58.0", "release": "7.fc41", "arch": "aarch64" }, { "name": "R-preprocessCore", "epoch": null, "version": "1.58.0", "release": "7.fc41", "arch": "src" }, { "name": "R-preprocessCore-devel", "epoch": null, "version": "1.58.0", "release": "7.fc41", "arch": "aarch64" }, { "name": "R-preprocessCore-debugsource", "epoch": null, "version": "1.58.0", "release": "7.fc41", "arch": "aarch64" } ] } RPMResults finished