Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c249' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/7566958-fedora-39-ppc64le --chroot fedora-39-ppc64le Version: 0.73 PID: 11014 Logging PID: 11015 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 7566958, 'buildroot_pkgs': [], 'chroot': 'fedora-39-ppc64le', 'enable_net': False, 'fedora_review': False, 'git_hash': 'c7d1731010917afef108c5ca35630a34a81d5395', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/pymol', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'pymol', 'package_version': '2.5.0-11', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-39-ppc64le/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/churchyard', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'submitter': 'https://src.fedoraproject.org/user/churchyard', 'tags': [], 'task_id': '7566958-fedora-39-ppc64le', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/pymol /var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/pymol', '/var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol'... Running: git checkout c7d1731010917afef108c5ca35630a34a81d5395 -- cmd: ['git', 'checkout', 'c7d1731010917afef108c5ca35630a34a81d5395', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol rc: 0 stdout: stderr: Note: switching to 'c7d1731010917afef108c5ca35630a34a81d5395'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at c7d1731 automatic import of pymol Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading pymol-open-source-2.5.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o pymol-open-source-2.5.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/pymol/pymol-open-source-2.5.0.tar.gz/md5/1c2d43789dd5580958fd75672ecfd8e7/pymol-open-source-2.5.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 9.9M 100 9.9M 0 0 29.1M 0 --:--:-- --:--:-- --:--:-- 29.1M INFO: Reading stdout from command: md5sum pymol-open-source-2.5.0.tar.gz INFO: Downloading pymol.png INFO: Calling: curl -H Pragma: -o pymol.png --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/pymol/pymol.png/md5/3bbd85dbd40f588f505ad988b6df2933/pymol.png % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 19466 100 19466 0 0 67529 0 --:--:-- --:--:-- --:--:-- 67590 INFO: Reading stdout from command: md5sum pymol.png Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol/pymol.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1717841492.444536 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol/pymol.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1717841492.444536 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol/pymol.spec) Config(fedora-39-ppc64le) Start: clean chroot Finish: clean chroot Mock Version: 5.6 INFO: Mock Version: 5.6 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-ppc64le-bootstrap-1717841492.444536/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-ppc64le-bootstrap-1717841492.444536/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/8e9ba61726183b2dee126981ecba380f5c226452b7831dd8bdffcd5ab0fe592f/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/8e9ba61726183b2dee126981ecba380f5c226452b7831dd8bdffcd5ab0fe592f/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 11 MB/s | 17 MB 00:01 Additional repo http_kojipkgs_fedoraproject_org 7.5 MB/s | 73 MB 00:09 fedora 8.4 MB/s | 83 MB 00:09 updates 13 MB/s | 35 MB 00:02 Last metadata expiration check: 0:00:12 ago on Sat Jun 8 10:14:19 2024. Package python3-dnf-4.19.2-1.fc39.noarch is already installed. Dependencies resolved. ========================================================================================================================== Package Arch Version Repository Size ========================================================================================================================== Installing: dnf5 ppc64le 5.2.3.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 685 k replacing dnf.noarch 4.19.2-1.fc39 replacing yum.noarch 4.19.2-1.fc39 python3-dnf-plugins-core noarch 4.7.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 302 k Upgrading: dnf-data noarch 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k libstdc++ ppc64le 14.1.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M python3-dnf noarch 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 580 k Installing dependencies: dbus-libs ppc64le 1:1.14.10-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 176 k fmt ppc64le 10.2.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 147 k libdnf5 ppc64le 5.2.3.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M libdnf5-cli ppc64le 5.2.3.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 313 k python3-dateutil noarch 1:2.8.2-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 345 k python3-dbus ppc64le 1.3.2-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 149 k python3-distro noarch 1.9.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45 k python3-six noarch 1.16.0-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python3-systemd ppc64le 235-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 101 k sdbus-cpp ppc64le 1.5.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 109 k Transaction Summary ========================================================================================================================== Install 12 Packages Upgrade 3 Packages Total download size: 5.0 M Downloading Packages: (1/15): dbus-libs-1.14.10-3.fc40.ppc64le.rpm 860 kB/s | 176 kB 00:00 (2/15): fmt-10.2.1-4.fc41.ppc64le.rpm 556 kB/s | 147 kB 00:00 (3/15): dnf5-5.2.3.0-1.fc41.ppc64le.rpm 2.3 MB/s | 685 kB 00:00 (4/15): libdnf5-cli-5.2.3.0-1.fc41.ppc64le.rpm 6.3 MB/s | 313 kB 00:00 (5/15): python3-dbus-1.3.2-6.fc40.ppc64le.rpm 6.2 MB/s | 149 kB 00:00 (6/15): python3-dateutil-2.8.2-13.fc40.noarch.r 7.2 MB/s | 345 kB 00:00 (7/15): libdnf5-5.2.3.0-1.fc41.ppc64le.rpm 7.3 MB/s | 1.0 MB 00:00 (8/15): python3-distro-1.9.0-3.fc40.noarch.rpm 1.8 MB/s | 45 kB 00:00 (9/15): python3-six-1.16.0-14.fc40.noarch.rpm 1.1 MB/s | 41 kB 00:00 (10/15): python3-dnf-plugins-core-4.7.0-1.fc41. 5.0 MB/s | 302 kB 00:00 (11/15): python3-systemd-235-9.fc40.ppc64le.rpm 1.7 MB/s | 101 kB 00:00 (12/15): sdbus-cpp-1.5.0-2.fc41.ppc64le.rpm 2.7 MB/s | 109 kB 00:00 (13/15): dnf-data-4.20.0-1.fc41.noarch.rpm 854 kB/s | 39 kB 00:00 (14/15): python3-dnf-4.20.0-1.fc41.noarch.rpm 11 MB/s | 580 kB 00:00 (15/15): libstdc++-14.1.1-4.fc41.ppc64le.rpm 7.5 MB/s | 1.0 MB 00:00 -------------------------------------------------------------------------------- Total 8.8 MB/s | 5.0 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : libstdc++-14.1.1-4.fc41.ppc64le 1/20 Installing : fmt-10.2.1-4.fc41.ppc64le 2/20 Installing : libdnf5-5.2.3.0-1.fc41.ppc64le 3/20 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : libdnf5-cli-5.2.3.0-1.fc41.ppc64le 4/20 Upgrading : dnf-data-4.20.0-1.fc41.noarch 5/20 Upgrading : python3-dnf-4.20.0-1.fc41.noarch 6/20 Installing : sdbus-cpp-1.5.0-2.fc41.ppc64le 7/20 Installing : python3-systemd-235-9.fc40.ppc64le 8/20 Installing : python3-six-1.16.0-14.fc40.noarch 9/20 Installing : python3-dateutil-1:2.8.2-13.fc40.noarch 10/20 Installing : python3-distro-1.9.0-3.fc40.noarch 11/20 Installing : dbus-libs-1:1.14.10-3.fc40.ppc64le 12/20 Installing : python3-dbus-1.3.2-6.fc40.ppc64le 13/20 Installing : python3-dnf-plugins-core-4.7.0-1.fc41.noarch 14/20 Installing : dnf5-5.2.3.0-1.fc41.ppc64le 15/20 Obsoleting : yum-4.19.2-1.fc39.noarch 16/20 Running scriptlet: dnf-4.19.2-1.fc39.noarch 17/20 Obsoleting : dnf-4.19.2-1.fc39.noarch 17/20 warning: directory /var/cache/dnf: remove failed: Device or resource busy Running scriptlet: dnf-4.19.2-1.fc39.noarch 17/20 Cleanup : python3-dnf-4.19.2-1.fc39.noarch 18/20 Cleanup : dnf-data-4.19.2-1.fc39.noarch 19/20 Cleanup : libstdc++-13.3.1-1.fc39.ppc64le 20/20 Running scriptlet: libstdc++-13.3.1-1.fc39.ppc64le 20/20 Verifying : dbus-libs-1:1.14.10-3.fc40.ppc64le 1/20 Verifying : dnf5-5.2.3.0-1.fc41.ppc64le 2/20 Verifying : dnf-4.19.2-1.fc39.noarch 3/20 Verifying : yum-4.19.2-1.fc39.noarch 4/20 Verifying : fmt-10.2.1-4.fc41.ppc64le 5/20 Verifying : libdnf5-5.2.3.0-1.fc41.ppc64le 6/20 Verifying : libdnf5-cli-5.2.3.0-1.fc41.ppc64le 7/20 Verifying : python3-dateutil-1:2.8.2-13.fc40.noarch 8/20 Verifying : python3-dbus-1.3.2-6.fc40.ppc64le 9/20 Verifying : python3-distro-1.9.0-3.fc40.noarch 10/20 Verifying : python3-dnf-plugins-core-4.7.0-1.fc41.noarch 11/20 Verifying : python3-six-1.16.0-14.fc40.noarch 12/20 Verifying : python3-systemd-235-9.fc40.ppc64le 13/20 Verifying : sdbus-cpp-1.5.0-2.fc41.ppc64le 14/20 Verifying : dnf-data-4.20.0-1.fc41.noarch 15/20 Verifying : dnf-data-4.19.2-1.fc39.noarch 16/20 Verifying : libstdc++-14.1.1-4.fc41.ppc64le 17/20 Verifying : libstdc++-13.3.1-1.fc39.ppc64le 18/20 Verifying : python3-dnf-4.20.0-1.fc41.noarch 19/20 Verifying : python3-dnf-4.19.2-1.fc39.noarch 20/20 Upgraded: dnf-data-4.20.0-1.fc41.noarch libstdc++-14.1.1-4.fc41.ppc64le python3-dnf-4.20.0-1.fc41.noarch Installed: dbus-libs-1:1.14.10-3.fc40.ppc64le dnf5-5.2.3.0-1.fc41.ppc64le fmt-10.2.1-4.fc41.ppc64le libdnf5-5.2.3.0-1.fc41.ppc64le libdnf5-cli-5.2.3.0-1.fc41.ppc64le python3-dateutil-1:2.8.2-13.fc40.noarch python3-dbus-1.3.2-6.fc40.ppc64le python3-distro-1.9.0-3.fc40.noarch python3-dnf-plugins-core-4.7.0-1.fc41.noarch python3-six-1.16.0-14.fc40.noarch python3-systemd-235-9.fc40.ppc64le sdbus-cpp-1.5.0-2.fc41.ppc64le Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-ppc64le-1717841492.444536/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.ppc64le rpm-sequoia-1.6.0-3.fc39.ppc64le python3-dnf-4.20.0-1.fc41.noarch python3-dnf-plugins-core-4.7.0-1.fc41.noarch dnf5-5.2.3.0-1.fc41.ppc64le Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 27 MB/s | 17 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 18 MB/s | 73 MB 00:04 fedora 13 MB/s | 83 MB 00:06 updates 10 MB/s | 35 MB 00:03 Last metadata expiration check: 0:00:08 ago on Sat Jun 8 10:17:05 2024. Dependencies resolved. ============================================================================================================================================= Package Arch Version Repository Size ============================================================================================================================================= Installing group/module packages: bash ppc64le 5.2.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 M bzip2 ppc64le 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 53 k coreutils ppc64le 9.5-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 M cpio ppc64le 2.15-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 293 k diffutils ppc64le 3.10-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 410 k fedora-release-common noarch 41-0.13 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k findutils ppc64le 1:4.10.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 579 k gawk ppc64le 5.3.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M glibc-minimal-langpack ppc64le 2.39.9000-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112 k grep ppc64le 3.11-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 299 k gzip ppc64le 1.13-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 168 k info ppc64le 7.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 201 k patch ppc64le 2.7.6-24.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 142 k redhat-rpm-config noarch 292-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 75 k rpm-build ppc64le 4.19.91-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78 k sed ppc64le 4.9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 314 k shadow-utils ppc64le 2:4.15.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 M tar ppc64le 2:1.35-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 874 k unzip ppc64le 6.0-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 191 k util-linux ppc64le 2.40.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 M which ppc64le 2.21-41.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43 k xz ppc64le 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 535 k Installing dependencies: add-determinism-nopython ppc64le 0.2.0-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 894 k alternatives ppc64le 1.27-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43 k ansible-srpm-macros noarch 1-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k audit-libs ppc64le 4.0.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 142 k authselect 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79 k zstd ppc64le 1.5.6-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 502 k Installing Groups: Buildsystem building group Transaction Summary ============================================================================================================================================= Install 155 Packages Total download size: 56 M Installed size: 325 M Downloading Packages: (1/155): alternatives-1.27-1.fc41.ppc64le.rpm 94 kB/s | 43 kB 00:00 (2/155): ansible-srpm-macros-1-15.fc41.noarch.r 216 kB/s | 21 kB 00:00 (3/155): audit-libs-4.0.1-2.fc41.ppc64le.rpm 952 kB/s | 142 kB 00:00 (4/155): authselect-1.5.0-5.fc41.ppc64le.rpm 1.0 MB/s | 142 kB 00:00 (5/155): add-determinism-nopython-0.2.0-9.fc41. 1.0 MB/s | 894 kB 00:00 (6/155): gdb-minimal-14.2-10.fc41.ppc64le.rpm 4.5 MB/s | 4.3 MB 00:00 (7/155): basesystem-11-20.fc40.noarch.rpm 45 kB/s | 7.2 kB 00:00 (8/155): authselect-libs-1.5.0-5.fc41.ppc64le.r 933 kB/s | 210 kB 00:00 (9/155): build-reproducibility-srpm-macros-0.2. 45 kB/s | 9.1 kB 00:00 (10/155): bzip2-1.0.8-18.fc40.ppc64le.rpm 427 kB/s | 53 kB 00:00 (11/155): bzip2-libs-1.0.8-18.fc40.ppc64le.rpm 336 kB/s | 47 kB 00:00 (12/155): bash-5.2.26-3.fc40.ppc64le.rpm 2.4 MB/s | 1.9 MB 00:00 (13/155): ca-certificates-2023.2.62_v7.0.401-6. 2.3 MB/s | 862 kB 00:00 (14/155): coreutils-9.5-2.fc41.ppc64le.rpm 3.3 MB/s | 1.3 MB 00:00 (15/155): binutils-2.42.50-14.fc41.ppc64le.rpm 5.3 MB/s | 6.4 MB 00:01 (16/155): cpio-2.15-1.fc40.ppc64le.rpm 2.0 MB/s | 293 kB 00:00 (17/155): cracklib-2.9.11-5.fc40.ppc64le.rpm 900 kB/s | 84 kB 00:00 (18/155): crypto-policies-20240521-1.gitf71d135 620 kB/s | 65 kB 00:00 (19/155): coreutils-common-9.5-2.fc41.ppc64le.r 4.1 MB/s | 2.1 MB 00:00 (20/155): curl-8.8.0-1.fc41.ppc64le.rpm 2.9 MB/s | 307 kB 00:00 (21/155): debugedit-5.0-16.fc41.ppc64le.rpm 830 kB/s | 82 kB 00:00 (22/155): cyrus-sasl-lib-2.1.28-22.fc41.ppc64le 5.0 MB/s | 883 kB 00:00 (23/155): diffutils-3.10-5.fc40.ppc64le.rpm 3.7 MB/s | 410 kB 00:00 (24/155): dwz-0.15-6.fc40.ppc64le.rpm 2.2 MB/s | 144 kB 00:00 (25/155): efi-srpm-macros-5-11.fc40.noarch.rpm 400 kB/s | 22 kB 00:00 (26/155): ed-1.20.2-1.fc41.ppc64le.rpm 746 kB/s | 85 kB 00:00 (27/155): elfutils-0.191-7.fc41.ppc64le.rpm 7.4 MB/s | 557 kB 00:00 (28/155): elfutils-debuginfod-client-0.191-7.fc 770 kB/s | 40 kB 00:00 (29/155): elfutils-default-yama-scope-0.191-7.f 333 kB/s | 13 kB 00:00 (30/155): elfutils-libelf-0.191-7.fc41.ppc64le. 4.7 MB/s | 218 kB 00:00 (31/155): elfutils-libs-0.191-7.fc41.ppc64le.rp 5.2 MB/s | 296 kB 00:00 (32/155): fedora-gpg-keys-41-0.2.noarch.rpm 3.2 MB/s | 122 kB 00:00 (33/155): fedora-release-41-0.13.noarch.rpm 281 kB/s | 11 kB 00:00 (34/155): fedora-release-common-41-0.13.noarch. 718 kB/s | 22 kB 00:00 (35/155): fedora-release-identity-basic-41-0.13 307 kB/s | 12 kB 00:00 (36/155): fedora-repos-41-0.2.noarch.rpm 341 kB/s | 9.3 kB 00:00 (37/155): fedora-repos-rawhide-41-0.2.noarch.rp 314 kB/s | 8.9 kB 00:00 (38/155): file-5.45-5.fc41.ppc64le.rpm 1.6 MB/s | 50 kB 00:00 (39/155): file-libs-5.45-5.fc41.ppc64le.rpm 12 MB/s | 775 kB 00:00 (40/155): filesystem-3.18-9.fc41.ppc64le.rpm 7.4 MB/s | 1.1 MB 00:00 (41/155): fonts-srpm-macros-2.0.5-15.fc41.noarc 333 kB/s | 27 kB 00:00 (42/155): findutils-4.10.0-2.fc41.ppc64le.rpm 3.2 MB/s | 579 kB 00:00 (43/155): forge-srpm-macros-0.3.1-1.fc41.noarch 175 kB/s | 19 kB 00:00 (44/155): fpc-srpm-macros-1.3-12.fc40.noarch.rp 70 kB/s | 7.8 kB 00:00 (45/155): gdbm-1.23-6.fc40.ppc64le.rpm 1.4 MB/s | 154 kB 00:00 (46/155): gdbm-libs-1.23-6.fc40.ppc64le.rpm 550 kB/s | 62 kB 00:00 (47/155): gawk-5.3.0-3.fc40.ppc64le.rpm 4.9 MB/s | 1.1 MB 00:00 (48/155): ghc-srpm-macros-1.9.1-1.fc41.noarch.r 111 kB/s | 9.0 kB 00:00 (49/155): glibc-common-2.39.9000-18.fc41.ppc64l 4.2 MB/s | 407 kB 00:00 (50/155): glibc-minimal-langpack-2.39.9000-18.f 1.1 MB/s | 112 kB 00:00 (51/155): glibc-gconv-extra-2.39.9000-18.fc41.p 7.2 MB/s | 2.0 MB 00:00 (52/155): gmp-6.3.0-1.fc41.ppc64le.rpm 1.8 MB/s 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00:00 (82/155): libpkgconf-2.1.1-1.fc41.ppc64le.rpm 567 kB/s | 43 kB 00:00 (83/155): libpsl-0.21.5-3.fc40.ppc64le.rpm 863 kB/s | 66 kB 00:00 (84/155): libpwquality-1.4.5-9.fc40.ppc64le.rpm 861 kB/s | 112 kB 00:00 (85/155): librtas-2.0.6-1.fc41.ppc64le.rpm 771 kB/s | 81 kB 00:00 (86/155): libselinux-3.6-4.fc40.ppc64le.rpm 811 kB/s | 100 kB 00:00 (87/155): libsemanage-3.6-3.fc40.ppc64le.rpm 1.2 MB/s | 128 kB 00:00 (88/155): libsepol-3.6-3.fc40.ppc64le.rpm 4.7 MB/s | 372 kB 00:00 (89/155): libsmartcols-2.40.1-1.fc41.ppc64le.rp 1.1 MB/s | 110 kB 00:00 (90/155): libssh-config-0.10.6-6.fc41.noarch.rp 123 kB/s | 9.1 kB 00:00 (91/155): libssh-0.10.6-6.fc41.ppc64le.rpm 2.5 MB/s | 240 kB 00:00 (92/155): libtasn1-4.19.0-6.fc40.ppc64le.rpm 493 kB/s | 79 kB 00:00 (93/155): libtool-ltdl-2.4.7-11.fc41.ppc64le.rp 285 kB/s | 39 kB 00:00 (94/155): libstdc++-14.1.1-4.fc41.ppc64le.rpm 2.5 MB/s | 1.0 MB 00:00 (95/155): libtirpc-1.3.4-1.rc3.fc41.ppc64le.rpm 322 kB/s | 107 kB 00:00 (96/155): 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openblas-srpm-macros-2-17.fc41.noarc 69 kB/s | 7.7 kB 00:00 (111/155): openldap-2.6.8-1.fc41.ppc64le.rpm 2.4 MB/s | 287 kB 00:00 (112/155): p11-kit-trust-0.25.3-4.fc40.ppc64le. 1.5 MB/s | 148 kB 00:00 (113/155): openssl-libs-3.2.2-1.fc41.ppc64le.rp 8.1 MB/s | 2.5 MB 00:00 (114/155): p11-kit-0.25.3-4.fc40.ppc64le.rpm 1.5 MB/s | 479 kB 00:00 (115/155): package-notes-srpm-macros-0.5-11.fc4 113 kB/s | 9.9 kB 00:00 (116/155): pam-libs-1.6.1-3.fc41.ppc64le.rpm 849 kB/s | 63 kB 00:00 (117/155): pam-1.6.1-3.fc41.ppc64le.rpm 4.8 MB/s | 562 kB 00:00 (118/155): patch-2.7.6-24.fc40.ppc64le.rpm 1.2 MB/s | 142 kB 00:00 (119/155): pcre2-10.43-2.fc41.1.ppc64le.rpm 2.5 MB/s | 252 kB 00:00 (120/155): pcre2-syntax-10.43-2.fc41.1.noarch.r 2.5 MB/s | 149 kB 00:00 (121/155): perl-srpm-macros-1-53.fc40.noarch.rp 146 kB/s | 8.4 kB 00:00 (122/155): pkgconf-2.1.1-1.fc41.ppc64le.rpm 535 kB/s | 44 kB 00:00 (123/155): pkgconf-m4-2.1.1-1.fc41.noarch.rpm 124 kB/s | 14 kB 00:00 (124/155): 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rpm-sequoia-1.6.0-3.fc41.ppc64le.rpm 6.8 MB/s | 930 kB 00:00 (139/155): sed-4.9-1.fc40.ppc64le.rpm 3.8 MB/s | 314 kB 00:00 (140/155): setup-2.15.0-4.fc41.noarch.rpm 1.6 MB/s | 148 kB 00:00 (141/155): sqlite-libs-3.46.0-1.fc41.ppc64le.rp 7.2 MB/s | 824 kB 00:00 (142/155): shadow-utils-4.15.1-5.fc41.ppc64le.r 5.4 MB/s | 1.3 MB 00:00 (143/155): unzip-6.0-63.fc40.ppc64le.rpm 1.8 MB/s | 191 kB 00:00 (144/155): tar-1.35-3.fc40.ppc64le.rpm 2.2 MB/s | 874 kB 00:00 (145/155): util-linux-2.40.1-1.fc41.ppc64le.rpm 3.4 MB/s | 1.3 MB 00:00 (146/155): util-linux-core-2.40.1-1.fc41.ppc64l 2.6 MB/s | 564 kB 00:00 (147/155): which-2.21-41.fc40.ppc64le.rpm 324 kB/s | 43 kB 00:00 (148/155): xxhash-libs-0.8.2-2.fc40.ppc64le.rpm 287 kB/s | 37 kB 00:00 (149/155): systemd-libs-256~rc4-2.fc41.ppc64le. 901 kB/s | 776 kB 00:00 (150/155): xz-libs-5.4.6-3.fc41.ppc64le.rpm 1.0 MB/s | 122 kB 00:00 (151/155): xz-5.4.6-3.fc41.ppc64le.rpm 3.1 MB/s | 535 kB 00:00 (152/155): zig-srpm-macros-1-2.fc40.noarch.rpm 67 kB/s | 8.0 kB 00:00 (153/155): zlib-ng-compat-2.1.6-6.fc41.ppc64le. 1.2 MB/s | 79 kB 00:00 (154/155): zip-3.0-40.fc40.ppc64le.rpm 2.5 MB/s | 274 kB 00:00 (155/155): zstd-1.5.6-1.fc41.ppc64le.rpm 1.1 MB/s | 502 kB 00:00 -------------------------------------------------------------------------------- Total 6.4 MB/s | 56 MB 00:08 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-9.fc41.ppc64le 1/1 Preparing : 1/1 Installing : libgcc-14.1.1-4.fc41.ppc64le 1/155 Running scriptlet: libgcc-14.1.1-4.fc41.ppc64le 1/155 Installing : crypto-policies-20240521-1.gitf71d135.fc41.noarc 2/155 Running scriptlet: crypto-policies-20240521-1.gitf71d135.fc41.noarc 2/155 Installing : fedora-release-identity-basic-41-0.13.noarch 3/155 Installing : fedora-repos-rawhide-41-0.2.noarch 4/155 Installing : fedora-gpg-keys-41-0.2.noarch 5/155 Installing : fedora-repos-41-0.2.noarch 6/155 Installing : fedora-release-common-41-0.13.noarch 7/155 Installing : fedora-release-41-0.13.noarch 8/155 Installing : setup-2.15.0-4.fc41.noarch 9/155 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.15.0-4.fc41.noarch 9/155 Installing : filesystem-3.18-9.fc41.ppc64le 10/155 Installing : basesystem-11-20.fc40.noarch 11/155 Installing : rust-srpm-macros-26.3-1.fc41.noarch 12/155 Installing : 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pcre2-10.43-2.fc41.1.ppc64le 65/155 Installing : libselinux-3.6-4.fc40.ppc64le 66/155 Installing : sed-4.9-1.fc40.ppc64le 67/155 Installing : grep-3.11-8.fc41.ppc64le 68/155 Installing : findutils-1:4.10.0-2.fc41.ppc64le 69/155 Installing : xz-1:5.4.6-3.fc41.ppc64le 70/155 Installing : libmount-2.40.1-1.fc41.ppc64le 71/155 Installing : util-linux-core-2.40.1-1.fc41.ppc64le 72/155 Installing : libsemanage-3.6-3.fc40.ppc64le 73/155 Installing : shadow-utils-2:4.15.1-5.fc41.ppc64le 74/155 Running scriptlet: libutempter-1.2.1-13.fc40.ppc64le 75/155 Installing : libutempter-1.2.1-13.fc40.ppc64le 75/155 Installing : tar-2:1.35-3.fc40.ppc64le 76/155 Installing : zstd-1.5.6-1.fc41.ppc64le 77/155 Installing : libpsl-0.21.5-3.fc40.ppc64le 78/155 Installing : zip-3.0-40.fc40.ppc64le 79/155 Installing : cyrus-sasl-lib-2.1.28-22.fc41.ppc64le 80/155 Installing : gdbm-1:1.23-6.fc40.ppc64le 81/155 Installing : libfdisk-2.40.1-1.fc41.ppc64le 82/155 Installing : add-determinism-nopython-0.2.0-9.fc41.ppc64le 83/155 Installing : build-reproducibility-srpm-macros-0.2.0-9.fc41.n 84/155 Installing : libxml2-2.12.7-1.fc41.ppc64le 85/155 Installing : bzip2-1.0.8-18.fc40.ppc64le 86/155 Installing : sqlite-libs-3.46.0-1.fc41.ppc64le 87/155 Installing : ed-1.20.2-1.fc41.ppc64le 88/155 Installing : patch-2.7.6-24.fc40.ppc64le 89/155 Installing : elfutils-default-yama-scope-0.191-7.fc41.noarch 90/155 Running scriptlet: elfutils-default-yama-scope-0.191-7.fc41.noarch 90/155 Installing : cpio-2.15-1.fc40.ppc64le 91/155 Installing : diffutils-3.10-5.fc40.ppc64le 92/155 Installing : jansson-2.13.1-9.fc40.ppc64le 93/155 Installing : keyutils-libs-1.6.3-3.fc40.ppc64le 94/155 Installing : libbrotli-1.1.0-3.fc40.ppc64le 95/155 Installing : libffi-3.4.6-1.fc41.ppc64le 96/155 Installing : p11-kit-0.25.3-4.fc40.ppc64le 97/155 Installing : p11-kit-trust-0.25.3-4.fc40.ppc64le 98/155 Running scriptlet: p11-kit-trust-0.25.3-4.fc40.ppc64le 98/155 Installing : libgomp-14.1.1-4.fc41.ppc64le 99/155 Installing : libnghttp2-1.62.0-1.fc41.ppc64le 100/155 Installing : libpkgconf-2.1.1-1.fc41.ppc64le 101/155 Installing : pkgconf-2.1.1-1.fc41.ppc64le 102/155 Installing : pkgconf-pkg-config-2.1.1-1.fc41.ppc64le 103/155 Installing : librtas-2.0.6-1.fc41.ppc64le 104/155 Running scriptlet: librtas-2.0.6-1.fc41.ppc64le 104/155 Installing : libtool-ltdl-2.4.7-11.fc41.ppc64le 105/155 Installing : libverto-0.3.2-8.fc40.ppc64le 106/155 Installing : xxhash-libs-0.8.2-2.fc40.ppc64le 107/155 Installing : libssh-config-0.10.6-6.fc41.noarch 108/155 Installing : kernel-srpm-macros-1.0-23.fc41.noarch 109/155 Installing : gnat-srpm-macros-6-5.fc40.noarch 110/155 Installing : ghc-srpm-macros-1.9.1-1.fc41.noarch 111/155 Installing : fpc-srpm-macros-1.3-12.fc40.noarch 112/155 Installing : coreutils-common-9.5-2.fc41.ppc64le 113/155 Installing : openssl-libs-1:3.2.2-1.fc41.ppc64le 114/155 Installing : coreutils-9.5-2.fc41.ppc64le 115/155 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 116/155 Installing : ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 116/155 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 116/155 Installing : krb5-libs-1.21.2-5.fc40.ppc64le 117/155 Installing : libarchive-3.7.4-1.fc41.ppc64le 118/155 Installing : libtirpc-1.3.4-1.rc3.fc41.ppc64le 119/155 Installing : authselect-libs-1.5.0-5.fc41.ppc64le 120/155 Installing : gzip-1.13-1.fc40.ppc64le 121/155 Installing : cracklib-2.9.11-5.fc40.ppc64le 122/155 Installing : libpwquality-1.4.5-9.fc40.ppc64le 123/155 Installing : authselect-1.5.0-5.fc41.ppc64le 124/155 Installing : libnsl2-2.0.1-1.fc40.ppc64le 125/155 Installing : pam-1.6.1-3.fc41.ppc64le 126/155 Installing : libssh-0.10.6-6.fc41.ppc64le 127/155 Installing : libevent-2.1.12-13.fc41.ppc64le 128/155 Installing : openldap-2.6.8-1.fc41.ppc64le 129/155 Installing : libcurl-8.8.0-1.fc41.ppc64le 130/155 Installing : elfutils-libs-0.191-7.fc41.ppc64le 131/155 Installing : elfutils-debuginfod-client-0.191-7.fc41.ppc64le 132/155 Installing : gdb-minimal-14.2-10.fc41.ppc64le 133/155 Installing : binutils-2.42.50-14.fc41.ppc64le 134/155 Running scriptlet: binutils-2.42.50-14.fc41.ppc64le 134/155 Installing : elfutils-0.191-7.fc41.ppc64le 135/155 Installing : debugedit-5.0-16.fc41.ppc64le 136/155 Installing : curl-8.8.0-1.fc41.ppc64le 137/155 Installing : rpm-sequoia-1.6.0-3.fc41.ppc64le 138/155 Installing : rpm-libs-4.19.91-8.fc41.ppc64le 139/155 Running scriptlet: rpm-4.19.91-8.fc41.ppc64le 140/155 Installing : rpm-4.19.91-8.fc41.ppc64le 140/155 Installing : efi-srpm-macros-5-11.fc40.noarch 141/155 Installing : lua-srpm-macros-1-13.fc40.noarch 142/155 Installing : zig-srpm-macros-1-2.fc40.noarch 143/155 Installing : rpm-build-libs-4.19.91-8.fc41.ppc64le 144/155 Installing : ansible-srpm-macros-1-15.fc41.noarch 145/155 Installing : fonts-srpm-macros-1:2.0.5-15.fc41.noarch 146/155 Installing : forge-srpm-macros-0.3.1-1.fc41.noarch 147/155 Installing : go-srpm-macros-3.6.0-1.fc41.noarch 148/155 Installing : python-srpm-macros-3.12-9.fc41.noarch 149/155 Installing : redhat-rpm-config-292-1.fc41.noarch 150/155 Installing : rpm-build-4.19.91-8.fc41.ppc64le 151/155 Installing : pyproject-srpm-macros-1.12.1-1.fc41.noarch 152/155 Installing : util-linux-2.40.1-1.fc41.ppc64le 153/155 Running scriptlet: util-linux-2.40.1-1.fc41.ppc64le 153/155 Installing : which-2.21-41.fc40.ppc64le 154/155 Installing : info-7.1-2.fc40.ppc64le 155/155 Running scriptlet: filesystem-3.18-9.fc41.ppc64le 155/155 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 155/155 Running scriptlet: authselect-libs-1.5.0-5.fc41.ppc64le 155/155 Running scriptlet: rpm-4.19.91-8.fc41.ppc64le 155/155 Running scriptlet: info-7.1-2.fc40.ppc64le 155/155 Installed: add-determinism-nopython-0.2.0-9.fc41.ppc64le alternatives-1.27-1.fc41.ppc64le ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-2.fc41.ppc64le authselect-1.5.0-5.fc41.ppc64le authselect-libs-1.5.0-5.fc41.ppc64le basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.ppc64le binutils-2.42.50-14.fc41.ppc64le build-reproducibility-srpm-macros-0.2.0-9.fc41.noarch bzip2-1.0.8-18.fc40.ppc64le bzip2-libs-1.0.8-18.fc40.ppc64le ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-2.fc41.ppc64le coreutils-common-9.5-2.fc41.ppc64le cpio-2.15-1.fc40.ppc64le cracklib-2.9.11-5.fc40.ppc64le crypto-policies-20240521-1.gitf71d135.fc41.noarch curl-8.8.0-1.fc41.ppc64le cyrus-sasl-lib-2.1.28-22.fc41.ppc64le debugedit-5.0-16.fc41.ppc64le diffutils-3.10-5.fc40.ppc64le dwz-0.15-6.fc40.ppc64le ed-1.20.2-1.fc41.ppc64le efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.ppc64le elfutils-debuginfod-client-0.191-7.fc41.ppc64le elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.ppc64le elfutils-libs-0.191-7.fc41.ppc64le fedora-gpg-keys-41-0.2.noarch fedora-release-41-0.13.noarch fedora-release-common-41-0.13.noarch fedora-release-identity-basic-41-0.13.noarch fedora-repos-41-0.2.noarch fedora-repos-rawhide-41-0.2.noarch file-5.45-5.fc41.ppc64le file-libs-5.45-5.fc41.ppc64le filesystem-3.18-9.fc41.ppc64le findutils-1:4.10.0-2.fc41.ppc64le fonts-srpm-macros-1:2.0.5-15.fc41.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.ppc64le gdb-minimal-14.2-10.fc41.ppc64le gdbm-1:1.23-6.fc40.ppc64le gdbm-libs-1:1.23-6.fc40.ppc64le ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-18.fc41.ppc64le glibc-common-2.39.9000-18.fc41.ppc64le glibc-gconv-extra-2.39.9000-18.fc41.ppc64le glibc-minimal-langpack-2.39.9000-18.fc41.ppc64le gmp-1:6.3.0-1.fc41.ppc64le gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-8.fc41.ppc64le gzip-1.13-1.fc40.ppc64le info-7.1-2.fc40.ppc64le jansson-2.13.1-9.fc40.ppc64le kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.ppc64le krb5-libs-1.21.2-5.fc40.ppc64le libacl-2.3.2-1.fc40.ppc64le libarchive-3.7.4-1.fc41.ppc64le libattr-2.5.2-3.fc40.ppc64le libblkid-2.40.1-1.fc41.ppc64le libbrotli-1.1.0-3.fc40.ppc64le libcap-2.70-1.fc41.ppc64le libcap-ng-0.8.5-1.fc41.ppc64le libcom_err-1.47.0-5.fc40.ppc64le libcurl-8.8.0-1.fc41.ppc64le libeconf-0.6.2-2.fc41.ppc64le libevent-2.1.12-13.fc41.ppc64le libfdisk-2.40.1-1.fc41.ppc64le libffi-3.4.6-1.fc41.ppc64le libgcc-14.1.1-4.fc41.ppc64le libgomp-14.1.1-4.fc41.ppc64le libidn2-2.3.7-1.fc40.ppc64le libmount-2.40.1-1.fc41.ppc64le libnghttp2-1.62.0-1.fc41.ppc64le libnsl2-2.0.1-1.fc40.ppc64le libpkgconf-2.1.1-1.fc41.ppc64le libpsl-0.21.5-3.fc40.ppc64le libpwquality-1.4.5-9.fc40.ppc64le librtas-2.0.6-1.fc41.ppc64le libselinux-3.6-4.fc40.ppc64le libsemanage-3.6-3.fc40.ppc64le libsepol-3.6-3.fc40.ppc64le libsmartcols-2.40.1-1.fc41.ppc64le libssh-0.10.6-6.fc41.ppc64le libssh-config-0.10.6-6.fc41.noarch libstdc++-14.1.1-4.fc41.ppc64le libtasn1-4.19.0-6.fc40.ppc64le libtirpc-1.3.4-1.rc3.fc41.ppc64le libtool-ltdl-2.4.7-11.fc41.ppc64le libunistring-1.1-7.fc41.ppc64le libutempter-1.2.1-13.fc40.ppc64le libuuid-2.40.1-1.fc41.ppc64le libverto-0.3.2-8.fc40.ppc64le libxcrypt-4.4.36-5.fc40.ppc64le libxml2-2.12.7-1.fc41.ppc64le libzstd-1.5.6-1.fc41.ppc64le lua-libs-5.4.6-5.fc40.ppc64le lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.ppc64le mpfr-4.2.1-4.fc41.ppc64le ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.ppc64le ocaml-srpm-macros-10-2.fc41.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.8-1.fc41.ppc64le openssl-libs-1:3.2.2-1.fc41.ppc64le p11-kit-0.25.3-4.fc40.ppc64le p11-kit-trust-0.25.3-4.fc40.ppc64le package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-3.fc41.ppc64le pam-libs-1.6.1-3.fc41.ppc64le patch-2.7.6-24.fc40.ppc64le pcre2-10.43-2.fc41.1.ppc64le pcre2-syntax-10.43-2.fc41.1.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.1-1.fc41.ppc64le pkgconf-m4-2.1.1-1.fc41.noarch pkgconf-pkg-config-2.1.1-1.fc41.ppc64le popt-1.19-6.fc40.ppc64le publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.1-1.fc41.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.14-1.fc41.noarch qt6-srpm-macros-6.7.1-1.fc41.noarch readline-8.2-8.fc40.ppc64le redhat-rpm-config-292-1.fc41.noarch rpm-4.19.91-8.fc41.ppc64le rpm-build-4.19.91-8.fc41.ppc64le rpm-build-libs-4.19.91-8.fc41.ppc64le rpm-libs-4.19.91-8.fc41.ppc64le rpm-sequoia-1.6.0-3.fc41.ppc64le rust-srpm-macros-26.3-1.fc41.noarch sed-4.9-1.fc40.ppc64le setup-2.15.0-4.fc41.noarch shadow-utils-2:4.15.1-5.fc41.ppc64le sqlite-libs-3.46.0-1.fc41.ppc64le systemd-libs-256~rc4-2.fc41.ppc64le tar-2:1.35-3.fc40.ppc64le unzip-6.0-63.fc40.ppc64le util-linux-2.40.1-1.fc41.ppc64le util-linux-core-2.40.1-1.fc41.ppc64le which-2.21-41.fc40.ppc64le xxhash-libs-0.8.2-2.fc40.ppc64le xz-1:5.4.6-3.fc41.ppc64le xz-libs-1:5.4.6-3.fc41.ppc64le zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.ppc64le zlib-ng-compat-2.1.6-6.fc41.ppc64le zstd-1.5.6-1.fc41.ppc64le Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-nopython-0.2.0-9.fc41.ppc64le alternatives-1.27-1.fc41.ppc64le ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-2.fc41.ppc64le authselect-1.5.0-5.fc41.ppc64le authselect-libs-1.5.0-5.fc41.ppc64le basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.ppc64le binutils-2.42.50-14.fc41.ppc64le build-reproducibility-srpm-macros-0.2.0-9.fc41.noarch bzip2-1.0.8-18.fc40.ppc64le bzip2-libs-1.0.8-18.fc40.ppc64le ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-2.fc41.ppc64le coreutils-common-9.5-2.fc41.ppc64le cpio-2.15-1.fc40.ppc64le cracklib-2.9.11-5.fc40.ppc64le crypto-policies-20240521-1.gitf71d135.fc41.noarch curl-8.8.0-1.fc41.ppc64le cyrus-sasl-lib-2.1.28-22.fc41.ppc64le debugedit-5.0-16.fc41.ppc64le diffutils-3.10-5.fc40.ppc64le dwz-0.15-6.fc40.ppc64le ed-1.20.2-1.fc41.ppc64le efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.ppc64le elfutils-debuginfod-client-0.191-7.fc41.ppc64le elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.ppc64le elfutils-libs-0.191-7.fc41.ppc64le fedora-gpg-keys-41-0.2.noarch fedora-release-41-0.13.noarch fedora-release-common-41-0.13.noarch fedora-release-identity-basic-41-0.13.noarch fedora-repos-41-0.2.noarch fedora-repos-rawhide-41-0.2.noarch file-5.45-5.fc41.ppc64le file-libs-5.45-5.fc41.ppc64le filesystem-3.18-9.fc41.ppc64le findutils-4.10.0-2.fc41.ppc64le fonts-srpm-macros-2.0.5-15.fc41.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.ppc64le gdb-minimal-14.2-10.fc41.ppc64le gdbm-1.23-6.fc40.ppc64le gdbm-libs-1.23-6.fc40.ppc64le ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-18.fc41.ppc64le glibc-common-2.39.9000-18.fc41.ppc64le glibc-gconv-extra-2.39.9000-18.fc41.ppc64le glibc-minimal-langpack-2.39.9000-18.fc41.ppc64le gmp-6.3.0-1.fc41.ppc64le gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-8.fc41.ppc64le gzip-1.13-1.fc40.ppc64le info-7.1-2.fc40.ppc64le jansson-2.13.1-9.fc40.ppc64le kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.ppc64le krb5-libs-1.21.2-5.fc40.ppc64le libacl-2.3.2-1.fc40.ppc64le libarchive-3.7.4-1.fc41.ppc64le libattr-2.5.2-3.fc40.ppc64le libblkid-2.40.1-1.fc41.ppc64le libbrotli-1.1.0-3.fc40.ppc64le libcap-2.70-1.fc41.ppc64le libcap-ng-0.8.5-1.fc41.ppc64le libcom_err-1.47.0-5.fc40.ppc64le libcurl-8.8.0-1.fc41.ppc64le libeconf-0.6.2-2.fc41.ppc64le libevent-2.1.12-13.fc41.ppc64le libfdisk-2.40.1-1.fc41.ppc64le libffi-3.4.6-1.fc41.ppc64le libgcc-14.1.1-4.fc41.ppc64le libgomp-14.1.1-4.fc41.ppc64le libidn2-2.3.7-1.fc40.ppc64le libmount-2.40.1-1.fc41.ppc64le libnghttp2-1.62.0-1.fc41.ppc64le libnsl2-2.0.1-1.fc40.ppc64le libpkgconf-2.1.1-1.fc41.ppc64le libpsl-0.21.5-3.fc40.ppc64le libpwquality-1.4.5-9.fc40.ppc64le librtas-2.0.6-1.fc41.ppc64le libselinux-3.6-4.fc40.ppc64le libsemanage-3.6-3.fc40.ppc64le libsepol-3.6-3.fc40.ppc64le libsmartcols-2.40.1-1.fc41.ppc64le libssh-0.10.6-6.fc41.ppc64le libssh-config-0.10.6-6.fc41.noarch libstdc++-14.1.1-4.fc41.ppc64le libtasn1-4.19.0-6.fc40.ppc64le libtirpc-1.3.4-1.rc3.fc41.ppc64le libtool-ltdl-2.4.7-11.fc41.ppc64le libunistring-1.1-7.fc41.ppc64le libutempter-1.2.1-13.fc40.ppc64le libuuid-2.40.1-1.fc41.ppc64le libverto-0.3.2-8.fc40.ppc64le libxcrypt-4.4.36-5.fc40.ppc64le libxml2-2.12.7-1.fc41.ppc64le libzstd-1.5.6-1.fc41.ppc64le lua-libs-5.4.6-5.fc40.ppc64le lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.ppc64le mpfr-4.2.1-4.fc41.ppc64le ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.ppc64le ocaml-srpm-macros-10-2.fc41.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.8-1.fc41.ppc64le openssl-libs-3.2.2-1.fc41.ppc64le p11-kit-0.25.3-4.fc40.ppc64le p11-kit-trust-0.25.3-4.fc40.ppc64le package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-3.fc41.ppc64le pam-libs-1.6.1-3.fc41.ppc64le patch-2.7.6-24.fc40.ppc64le pcre2-10.43-2.fc41.1.ppc64le pcre2-syntax-10.43-2.fc41.1.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.1-1.fc41.ppc64le pkgconf-m4-2.1.1-1.fc41.noarch pkgconf-pkg-config-2.1.1-1.fc41.ppc64le popt-1.19-6.fc40.ppc64le publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.1-1.fc41.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.14-1.fc41.noarch qt6-srpm-macros-6.7.1-1.fc41.noarch readline-8.2-8.fc40.ppc64le redhat-rpm-config-292-1.fc41.noarch rpm-4.19.91-8.fc41.ppc64le rpm-build-4.19.91-8.fc41.ppc64le rpm-build-libs-4.19.91-8.fc41.ppc64le rpm-libs-4.19.91-8.fc41.ppc64le rpm-sequoia-1.6.0-3.fc41.ppc64le rust-srpm-macros-26.3-1.fc41.noarch sed-4.9-1.fc40.ppc64le setup-2.15.0-4.fc41.noarch shadow-utils-4.15.1-5.fc41.ppc64le sqlite-libs-3.46.0-1.fc41.ppc64le systemd-libs-256~rc4-2.fc41.ppc64le tar-1.35-3.fc40.ppc64le unzip-6.0-63.fc40.ppc64le util-linux-2.40.1-1.fc41.ppc64le util-linux-core-2.40.1-1.fc41.ppc64le which-2.21-41.fc40.ppc64le xxhash-libs-0.8.2-2.fc40.ppc64le xz-5.4.6-3.fc41.ppc64le xz-libs-5.4.6-3.fc41.ppc64le zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.ppc64le zlib-ng-compat-2.1.6-6.fc41.ppc64le zstd-1.5.6-1.fc41.ppc64le Start: buildsrpm Start: rpmbuild -bs Building target platforms: ppc64le Building for target ppc64le setting SOURCE_DATE_EPOCH=1717804800 Wrote: /builddir/build/SRPMS/pymol-2.5.0-11.fc41.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-39-ppc64le-1717841492.444536/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-ppc64le-1717841492.444536/root/var/log/dnf.log /var/lib/mock/fedora-39-ppc64le-1717841492.444536/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-ppc64le-1717841492.444536/root/var/log/dnf.rpm.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-fcxwcdfq/pymol/pymol.spec) Config(child) 6 minutes 46 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/pymol-2.5.0-11.fc41.src.rpm) Config(fedora-39-ppc64le) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-ppc64le-bootstrap-1717841492.444536/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-ppc64le-bootstrap-1717841492.444536/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-ppc64le-1717841492.444536/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.ppc64le rpm-sequoia-1.6.0-3.fc39.ppc64le python3-dnf-4.20.0-1.fc41.noarch python3-dnf-plugins-core-4.7.0-1.fc41.noarch dnf5-5.2.3.0-1.fc41.ppc64le Finish: chroot init Start: build phase for pymol-2.5.0-11.fc41.src.rpm Start: build setup for pymol-2.5.0-11.fc41.src.rpm Building target platforms: ppc64le Building for target ppc64le setting SOURCE_DATE_EPOCH=1717804800 Wrote: /builddir/build/SRPMS/pymol-2.5.0-11.fc41.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 2.7 kB/s | 1.5 kB 00:00 Copr repository 15 MB/s | 17 MB 00:01 Additional repo 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k Transaction Summary ====================================================================================================================================== Install 318 Packages Total download size: 230 M Installed size: 1.0 G Downloading Packages: (1/318): flexiblas-3.4.4-1.fc41.ppc64le.rpm 136 kB/s | 26 kB 00:00 (2/318): flexiblas-openblas-openmp-3.4.4-1.fc41 77 kB/s | 17 kB 00:00 (3/318): gstreamer1-plugins-bad-free-libs-1.24. 3.8 MB/s | 949 kB 00:00 (4/318): python-qt5-rpm-macros-5.15.10-8.fc41.n 45 kB/s | 9.5 kB 00:00 (5/318): flexiblas-netlib-3.4.4-1.fc41.ppc64le. 4.2 MB/s | 2.9 MB 00:00 (6/318): python3-qt5-5.15.10-8.fc41.ppc64le.rpm 1.8 MB/s | 1.1 MB 00:00 (7/318): python3-numpy-1.26.4-7.fc41.ppc64le.rp 10 MB/s | 6.8 MB 00:00 (8/318): python3-qt5-base-5.15.10-8.fc41.ppc64l 6.1 MB/s | 2.9 MB 00:00 (9/318): python3-qt5-devel-5.15.10-8.fc41.ppc64 2.8 MB/s | 393 kB 00:00 (10/318): abattis-cantarell-vf-fonts-0.301-12.f 250 kB/s | 120 kB 00:00 (11/318): annobin-docs-12.54-2.fc41.noarch.rpm 647 kB/s | 90 kB 00:00 (12/318): alsa-lib-1.2.11-2.fc40.ppc64le.rpm 976 kB/s | 569 kB 00:00 (13/318): add-determinism-0.2.0-9.fc41.ppc64le. 1.3 MB/s | 912 kB 00:00 (14/318): avahi-libs-0.8-26.fc40.ppc64le.rpm 812 kB/s | 72 kB 00:00 (15/318): blosc-1.21.5-4.fc40.ppc64le.rpm 966 kB/s | 52 kB 00:00 (16/318): bluez-libs-5.76-1.fc41.ppc64le.rpm 1.0 MB/s | 89 kB 00:00 (17/318): brotli-1.1.0-3.fc40.ppc64le.rpm 250 kB/s | 21 kB 00:00 (18/318): brotli-devel-1.1.0-3.fc40.ppc64le.rpm 320 kB/s | 34 kB 00:00 (19/318): bzip2-devel-1.0.8-18.fc40.ppc64le.rpm 1.3 MB/s | 213 kB 00:00 (20/318): annobin-plugin-gcc-12.54-2.fc41.ppc64 2.1 MB/s | 966 kB 00:00 (21/318): cairo-devel-1.18.0-3.fc40.ppc64le.rpm 1.5 MB/s | 176 kB 00:00 (22/318): cairo-1.18.0-3.fc40.ppc64le.rpm 3.2 MB/s | 799 kB 00:00 (23/318): catch-3.6.0-1.fc41.ppc64le.rpm 2.4 MB/s | 353 kB 00:00 (24/318): cdparanoia-libs-10.2-44.fc40.ppc64le. 1.1 MB/s | 60 kB 00:00 (25/318): 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xcb-util-0.4.1-5.fc40.ppc64le.rpm 182 kB/s | 18 kB 00:00 (309/318): vulkan-loader-1.3.283.0-2.fc41.ppc64 574 kB/s | 184 kB 00:00 (310/318): xcb-util-keysyms-0.4.1-5.fc40.ppc64l 150 kB/s | 15 kB 00:00 (311/318): xcb-util-image-0.4.1-5.fc40.ppc64le. 169 kB/s | 20 kB 00:00 (312/318): xcb-util-renderutil-0.3.10-5.fc40.pp 196 kB/s | 18 kB 00:00 (313/318): xcb-util-wm-0.4.2-5.fc40.ppc64le.rpm 335 kB/s | 32 kB 00:00 (314/318): xml-common-0.6.3-63.fc40.noarch.rpm 364 kB/s | 31 kB 00:00 (315/318): xkeyboard-config-2.41-1.fc40.noarch. 6.1 MB/s | 921 kB 00:00 (316/318): xz-devel-5.4.6-3.fc41.ppc64le.rpm 567 kB/s | 62 kB 00:00 (317/318): xorg-x11-proto-devel-2024.1-2.fc41.n 1.5 MB/s | 266 kB 00:00 (318/318): zlib-ng-compat-devel-2.1.6-6.fc41.pp 341 kB/s | 37 kB 00:00 -------------------------------------------------------------------------------- Total 15 MB/s | 230 MB 00:15 Running transaction check Transaction check succeeded. 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gnutls-3.8.5-2.fc41.ppc64le google-noto-fonts-common-20240401-1.fc41.noarch google-noto-sans-vf-fonts-20240401-1.fc41.noarch graphene-1.10.6-8.fc40.ppc64le graphite2-1.3.14-15.fc40.ppc64le graphite2-devel-1.3.14-15.fc40.ppc64le groff-base-1.23.0-6.fc40.ppc64le gsm-1.0.22-6.fc40.ppc64le gssdp-1.6.3-2.fc40.ppc64le gstreamer1-1.24.4-1.fc41.ppc64le gstreamer1-plugins-bad-free-libs-1.24.4-2.fc41.ppc64le gstreamer1-plugins-base-1.24.4-1.fc41.ppc64le guile30-3.0.9-1.fc41.ppc64le gupnp-1.6.6-2.fc40.ppc64le gupnp-igd-1.6.0-4.fc40.ppc64le harfbuzz-8.4.0-1.fc41.ppc64le harfbuzz-devel-8.4.0-1.fc41.ppc64le harfbuzz-icu-8.4.0-1.fc41.ppc64le hdf-libs-4.2.16.2-1.fc40.ppc64le hdf5-1.12.1-15.fc40.ppc64le hdf5-devel-1.12.1-15.fc40.ppc64le iso-codes-4.16.0-3.fc40.noarch json-glib-1.8.0-3.fc40.ppc64le jsoncpp-1.9.5-7.fc40.ppc64le kernel-headers-6.10.0-0.rc2.24.fc41.ppc64le lame-libs-3.100-17.fc40.ppc64le libGLEW-2.2.0-7.fc40.ppc64le libICE-1.1.1-3.fc40.ppc64le libSM-1.2.4-3.fc40.ppc64le 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mmtf-cpp-devel-1.1.0-5.fc40.ppc64le mpdecimal-2.5.1-9.fc40.ppc64le mpg123-libs-1.31.3-4.fc40.ppc64le msgpack-3.1.0-14.fc40.ppc64le msgpack-devel-3.1.0-14.fc40.ppc64le mtdev-1.1.6-8.fc40.ppc64le ncurses-6.4-12.20240127.fc40.ppc64le netcdf-4.9.2-5.fc40.ppc64le netcdf-devel-4.9.2-5.fc40.ppc64le nettle-3.9.1-6.fc40.ppc64le openal-soft-1.23.1-5.fc40.ppc64le openblas-0.3.26-4.fc40.ppc64le openblas-openmp-0.3.26-4.fc40.ppc64le opus-1.5.1-1.fc41.ppc64le orc-0.4.38-2.fc41.ppc64le pango-1.52.2-1.fc41.ppc64le pcre2-devel-10.43-2.fc41.1.ppc64le pcre2-utf16-10.43-2.fc41.1.ppc64le pcre2-utf32-10.43-2.fc41.1.ppc64le perl-AutoLoader-5.74-507.fc41.noarch perl-B-1.88-507.fc41.ppc64le perl-Carp-1.54-502.fc40.noarch perl-Class-Struct-0.68-507.fc41.noarch perl-Data-Dumper-2.189-504.fc41.ppc64le perl-Digest-1.20-502.fc40.noarch perl-Digest-MD5-2.59-3.fc40.ppc64le perl-DynaLoader-1.54-507.fc41.ppc64le perl-Encode-4:3.21-505.fc41.ppc64le perl-English-1.11-507.fc41.noarch perl-Errno-1.37-507.fc41.ppc64le perl-Exporter-5.78-3.fc40.noarch perl-Fcntl-1.15-507.fc41.ppc64le perl-File-Basename-2.86-507.fc41.noarch perl-File-Find-1.43-507.fc41.noarch perl-File-Path-2.18-503.fc40.noarch perl-File-Temp-1:0.231.100-503.fc40.noarch perl-File-stat-1.13-507.fc41.noarch perl-FileHandle-2.05-507.fc41.noarch perl-Getopt-Long-1:2.57-4.fc41.noarch perl-Getopt-Std-1.13-507.fc41.noarch perl-HTTP-Tiny-0.088-5.fc40.noarch perl-IO-1.52-507.fc41.ppc64le perl-IO-Socket-IP-0.42-2.fc40.noarch perl-IO-Socket-SSL-2.085-1.fc40.noarch perl-IPC-Open3-1.22-507.fc41.noarch perl-MIME-Base64-3.16-503.fc40.ppc64le perl-Mozilla-CA-20240313-1.fc41.noarch perl-Net-SSLeay-1.94-3.fc40.ppc64le perl-POSIX-2.13-507.fc41.ppc64le perl-PathTools-3.91-503.fc41.ppc64le perl-Pod-Escapes-1:1.07-503.fc40.noarch perl-Pod-Perldoc-3.28.01-503.fc40.noarch perl-Pod-Simple-1:3.45-6.fc40.noarch perl-Pod-Usage-4:2.03-504.fc41.noarch perl-Scalar-List-Utils-5:1.63-503.fc40.ppc64le perl-SelectSaver-1.02-507.fc41.noarch perl-Socket-4:2.038-1.fc41.ppc64le perl-Storable-1:3.32-502.fc40.ppc64le perl-Symbol-1.09-507.fc41.noarch perl-Term-ANSIColor-5.01-504.fc40.noarch perl-Term-Cap-1.18-503.fc40.noarch perl-Text-ParseWords-3.31-502.fc40.noarch perl-Text-Tabs+Wrap-2024.001-1.fc41.noarch perl-Time-Local-2:1.350-5.fc40.noarch perl-URI-5.28-1.fc41.noarch perl-base-2.27-507.fc41.noarch perl-constant-1.33-503.fc40.noarch perl-if-0.61.000-507.fc41.noarch perl-interpreter-4:5.38.2-507.fc41.ppc64le perl-libnet-3.15-503.fc40.noarch perl-libs-4:5.38.2-507.fc41.ppc64le perl-locale-1.10-507.fc41.noarch perl-mro-1.28-507.fc41.ppc64le perl-overload-1.37-507.fc41.noarch perl-overloading-0.02-507.fc41.noarch perl-parent-1:0.241-502.fc40.noarch perl-podlators-1:5.01-502.fc40.noarch perl-vars-1.05-507.fc41.noarch pixman-0.43.4-1.fc41.ppc64le pixman-devel-0.43.4-1.fc41.ppc64le pulseaudio-libs-17.0-1.fc41.ppc64le pyproject-rpm-macros-1.12.1-1.fc41.noarch python-pip-wheel-24.0-2.fc41.noarch python-qt5-rpm-macros-5.15.10-8.fc41.noarch python-rpm-macros-3.12-9.fc41.noarch python3-3.12.3-2.fc41.ppc64le python3-dbus-1.3.2-6.fc40.ppc64le python3-devel-3.12.3-2.fc41.ppc64le python3-libs-3.12.3-2.fc41.ppc64le python3-mmtf-1.1.3-4.fc41.noarch python3-msgpack-1.0.7-3.fc40.ppc64le python3-numpy-1:1.26.4-7.fc41.ppc64le python3-packaging-24.0-1.fc41.noarch python3-pyqt5-sip-12.13.0-3.fc40.ppc64le python3-qt5-5.15.10-8.fc41.ppc64le python3-qt5-base-5.15.10-8.fc41.ppc64le python3-qt5-devel-5.15.10-8.fc41.ppc64le python3-rpm-generators-14-10.fc40.noarch python3-rpm-macros-3.12-9.fc41.noarch python3-setuptools-69.2.0-3.fc41.noarch python3-simplejson-3.19.2-3.fc40.ppc64le qt-settings-40.0-1.fc41.noarch qt5-qtbase-5.15.14-1.fc41.ppc64le qt5-qtbase-common-5.15.14-1.fc41.noarch qt5-qtbase-devel-5.15.14-1.fc41.ppc64le qt5-qtbase-gui-5.15.14-1.fc41.ppc64le qt5-qtconnectivity-5.15.14-1.fc41.ppc64le qt5-qtdeclarative-5.15.14-1.fc41.ppc64le qt5-qtlocation-5.15.14-1.fc41.ppc64le qt5-qtmultimedia-5.15.14-1.fc41.ppc64le qt5-qtsensors-5.15.14-1.fc41.ppc64le qt5-qtserialport-5.15.14-1.fc41.ppc64le qt5-qtsvg-5.15.14-1.fc41.ppc64le qt5-qttools-common-5.15.14-1.fc41.noarch qt5-qttools-libs-designer-5.15.14-1.fc41.ppc64le qt5-qttools-libs-help-5.15.14-1.fc41.ppc64le qt5-qtwebchannel-5.15.14-1.fc41.ppc64le qt5-qtwebsockets-5.15.14-1.fc41.ppc64le qt5-qtx11extras-5.15.14-1.fc41.ppc64le qt5-qtxmlpatterns-5.15.14-1.fc41.ppc64le qt5-rpm-macros-5.15.14-1.fc41.noarch rhash-1.4.4-1.fc41.ppc64le shared-mime-info-2.3-5.fc41.ppc64le snappy-1.2.1-1.fc41.ppc64le sysprof-capture-devel-46.0-1.fc41.ppc64le tzdata-2024a-8.fc41.noarch vim-filesystem-2:9.1.452-1.fc41.noarch vulkan-headers-1.3.283.0-1.fc41.noarch vulkan-loader-1.3.283.0-2.fc41.ppc64le vulkan-loader-devel-1.3.283.0-2.fc41.ppc64le xcb-util-0.4.1-5.fc40.ppc64le xcb-util-image-0.4.1-5.fc40.ppc64le xcb-util-keysyms-0.4.1-5.fc40.ppc64le xcb-util-renderutil-0.3.10-5.fc40.ppc64le xcb-util-wm-0.4.2-5.fc40.ppc64le xkeyboard-config-2.41-1.fc40.noarch xml-common-0.6.3-63.fc40.noarch xorg-x11-proto-devel-2024.1-2.fc41.noarch xz-devel-1:5.4.6-3.fc41.ppc64le zlib-ng-compat-devel-2.1.6-6.fc41.ppc64le Complete! Finish: build setup for pymol-2.5.0-11.fc41.src.rpm Start: rpmbuild pymol-2.5.0-11.fc41.src.rpm Building target platforms: ppc64le Building for target ppc64le setting SOURCE_DATE_EPOCH=1717804800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.ep8Gqn + umask 022 + cd /builddir/build/BUILD/pymol-2.5.0-build + test -d /builddir/build/BUILD/pymol-2.5.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/pymol-2.5.0-build + /usr/bin/rm -rf /builddir/build/BUILD/pymol-2.5.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/pymol-2.5.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.acY5kW + umask 022 + cd /builddir/build/BUILD/pymol-2.5.0-build + cd /builddir/build/BUILD/pymol-2.5.0-build + rm -rf pymol-open-source-2.5.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/pymol-open-source-2.5.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd pymol-open-source-2.5.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pymol-setup.py.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pymol-wmclass-main.patch + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pymol-wmclass-pmgapp.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pymol-mmtf.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pymol-2.5.0-bug186.patch + ln -sr modules/web modules/pymol_web + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.JMrqPd + umask 022 + cd /builddir/build/BUILD/pymol-2.5.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pymol-open-source-2.5.0 + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' ++ /usr/bin/getconf _NPROCESSORS_ONLN + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' --use-msgpackc=c++11 --use-openmp=yes --jobs 2 In file included from contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:79: contrib/uiuc/plugins/molfile_plugin/src/fastio.h: In function ‘fio_readv’: contrib/uiuc/plugins/molfile_plugin/src/fastio.h:519:14: warning: comparison of integer expressions of different signedness: ‘fio_size_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 519 | if (rc != iov[i].iov_len) | ^~ In file included from contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:89: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘swap8_unaligned’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘swap4_unaligned’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘swap2_unaligned’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/fastio.h:459:19: warning: ‘fio_readv’ defined but not used [-Wunused-function] 459 | static fio_size_t fio_readv(fio_fd fd, const fio_iovec * iov, int iovcnt) { | ^~~~~~~~~ contrib/mmtf-c/mmtf_parser.cpp: In function ‘bool MMTF_unpack_from_file(const char*, MMTF_container*)’: contrib/mmtf-c/mmtf_parser.cpp:1075:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1075 | fread(buffer, fileLen, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In function ‘int {anonymous}::write_structure(void*, int, const molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1904:9: warning: unused variable ‘last_ctnumber’ [-Wunused-variable] 1904 | int last_ctnumber = -1; | ^~~~~~~~~~~~~ contrib/mmtf-c/mmtf_parser.cpp: In function ‘MMTF_parser_fetch_typed_array(msgpack::v2::object const*, unsigned long*, int)’: contrib/mmtf-c/mmtf_parser.cpp:869:5: warning: ‘typecheck’ may be used uninitialized [-Wmaybe-uninitialized] 869 | if (typecode != typecheck) { | ^~ contrib/mmtf-c/mmtf_parser.cpp:864:9: note: ‘typecheck’ was declared here 864 | int typecheck; | ^~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function ‘PlugIOManagerInitAll’: contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:271:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 271 | if(ok) ok = ok && (molfile_xyzplugin_init() == VMDPLUGIN_SUCCESS); | ^~ contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:273:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 273 | if(ok) { | ^~ contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function ‘PlugIOManagerFreeAll’: contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:411:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 411 | if(ok) ok = ok && (molfile_xyzplugin_fini() == VMDPLUGIN_SUCCESS); | ^~ contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:413:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 413 | return ok; | ^~~~~~ contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In function ‘(anonymous namespace)::read_structure(void*, int*, molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1786:22: warning: ‘strncpy’ specified bound 16 equals destination size [-Wstringop-truncation] 1786 | strncpy( ct.particles[to].type, v->second.funct.c_str(), | ^ contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function ‘abinit_readline’: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:279:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 279 | for (i = 0; i < strlen(line); ++i) { | ^ contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function ‘DEN_read_volumetric_data’: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:970:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 970 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:971:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 971 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function ‘POT_read_volumetric_data’: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1113:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1113 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1114:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1114 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function ‘abinit_header’: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1511:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1511 | fread(skip, 1, 8, fp); | ^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function ‘GEO_read_next_timestep’: contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:619:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 619 | fscanf(data->file, "%*s %f %f %f", &x, &y, &z); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:70: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In member function ‘(anonymous namespace)::AtomArray::insert_row(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)’: contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:886:16: warning: ‘strncpy’ specified bound 16 equals destination size [-Wstringop-truncation] 886 | strncpy( a.name, | ^ In file included from contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c:42: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘angular_momentum_expon’: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:545:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 545 | for (i=0; ifile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:252:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 252 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘int read_bgf_bonds_aux(void*, int*, int**, int**, float**)’: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:328:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 328 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:346:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 346 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:355:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 355 | fgets(nextline, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:419:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 419 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘int read_bgf_structure(void*, int*, molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:194:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 194 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:203:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 203 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘void* open_bgf_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:59:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 59 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘read_bgf_timestep(void*, int, molfile_timestep_t*)’: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:120:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 224 [-Wstringop-truncation] 120 | strncpy(numstr, record + 31, 10); | ^ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:125:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 214 [-Wstringop-truncation] 125 | strncpy(numstr+10, record + 41, 10); | ^ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:130:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 204 [-Wstringop-truncation] 130 | strncpy(numstr+20, record + 51, 10); | ^ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function ‘read_bgf_structure(void*, int*, molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:144:10: warning: ‘strncpy’ output may be truncated copying 5 bytes from a string of length 242 [-Wstringop-truncation] 144 | strncpy(name, record + 13, 5); | ^ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:149:10: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 236 [-Wstringop-truncation] 149 | strncpy(resname, record + 19, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:167:10: warning: ‘strncpy’ output may be truncated copying 5 bytes from a string of length 194 [-Wstringop-truncation] 167 | strncpy(type, record+61, 5); | ^ contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c: In function ‘open_binpos_read’: contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c:64:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 64 | fread(magicchar,sizeof(char),4,fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c:72:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 72 | fread(&igarb,sizeof(int),1,fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp: In function ‘int read_mdf_bonds(void*, int*, int**, int**, float**, int**, int*, char***)’: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:278:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 278 | fgets(line, LINESIZE, mdf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:297:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 297 | fgets(line, LINESIZE, mdf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:319:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 319 | fgets(line, LINESIZE, mdf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:357:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 357 | fgets(line, LINESIZE, mdf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp: In function ‘int read_mdf_structure(void*, int*, molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:223:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 223 | fgets(line, LINESIZE, mdf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:241:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 241 | fgets(line, LINESIZE, mdf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp: In function ‘void* open_mdf_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:164:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 164 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:176:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 176 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:183:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 183 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp: In function ‘int read_brix_data(void*, int, float*, float*)’: contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:247:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 247 | fread(brick, sizeof(char), 512, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp: In function ‘void* open_brix_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:79:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 79 | fscanf(fd, "%3s", keyWord); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:86:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 86 | fscanf(fd, " %s %d %d %d", keyWord, &org_x, &org_y, &org_z); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:93:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 93 | fscanf(fd, " %s %d %d %d", keyWord, &ext_x, &ext_y, &ext_z); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:100:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 100 | fscanf(fd, " %s %f %f %f", keyWord, &grid_x, &grid_y, &grid_z); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:109:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 109 | fscanf(fd, " %s %f %f %f %f %f %f", keyWord, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 | &cell_x, &cell_y, &cell_z, &cell_alpha, &cell_beta, &cell_gamma); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:123:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 123 | fscanf(fd, " %s %f", keyWord, &prod); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:128:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 128 | fscanf(fd, " %s %f", keyWord, &plus); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:135:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 135 | fscanf(fd, " %s %f", keyWord, &sigma); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function ‘int read_mol2_timestep(void*, int, molfile_timestep_t*)’: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:275:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 275 | fgets(line, LINESIZE, mol2->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:289:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 289 | fgets(line, LINESIZE, mol2->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function ‘int read_mol2_bonds_aux(void*, int*, int**, int**, float**)’: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:199:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fgets(line, LINESIZE, mol2->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:209:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 209 | fgets(line, LINESIZE, mol2->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function ‘int read_mol2(void*, int*, molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:127:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 127 | fgets(line, LINESIZE, mol2->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:138:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fgets(line, LINESIZE, mol2->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function ‘void* open_mol2_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:74:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 74 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:81:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 81 | fgets(line, LINESIZE, fd); // Read and ignore the mol_name | ~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:82:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 82 | fgets(line, LINESIZE, fd); // Read the molecule info | ~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:91:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 91 | fgets(line, LINESIZE, fd); // Read and ignore the mol_type | ~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:92:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 92 | fgets(line, LINESIZE, fd); // Read the charge_type | ~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function ‘read_car_timestep’: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:326:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 326 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:339:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 339 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:344:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 344 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:349:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 349 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:363:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 363 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:373:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 373 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function ‘read_car_structure’: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:266:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 266 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:268:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 268 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:272:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 272 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:295:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 295 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:305:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 305 | fgets(line, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function ‘open_car_read’: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:169:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 169 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:179:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 179 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:182:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 182 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:210:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 210 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:213:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 213 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:224:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 224 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:226:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 226 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:230:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 230 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:234:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 234 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:245:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 245 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function ‘read_car_structure’: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:127:29: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=] 127 | sprintf(atom->resname, "%d", resid); | ^~ In function ‘read_car_structure_line’, inlined from ‘read_car_structure’ at contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:277:12: contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:127:28: note: directive argument in the range [-2147483648, 9999999] 127 | sprintf(atom->resname, "%d", resid); | ^~~~ In file included from /usr/include/stdio.h:980, from contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:85: In function ‘*__sprintfieee128’, inlined from ‘read_car_structure_line’ at contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:127:5, inlined from ‘read_car_structure’ at contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:277:12: /usr/include/bits/stdio2.h:30:10: note: ‘*__sprintf_chkieee128’ output between 2 and 12 bytes into a destination of size 8 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp: In function ‘int read_ccp4_data(void*, int, float*, float*)’: contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:495:58: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 495 | if ( fread(rowdata, sizeof(char), extent[0], fd) != extent[0] ) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:525:67: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 525 | if ( fread(rowdata, sizeof(unsigned char), extent[0], fd) != extent[0] ) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:556:58: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | if (fread(rowdata, sizeof(float), extent[0], fd) != extent[0] ) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:588:58: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 588 | if (fread(rowdata, sizeof(short), extent[0], fd) != extent[0] ) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:623:67: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 623 | if (fread(rowdata, sizeof(unsigned short), extent[0], fd) != extent[0] ) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:655:60: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 655 | if ( fread(rowdata, sizeof(uchar3), extent[0], fd) != extent[0] ) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp: In function ‘void* open_ccp4_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:304:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 304 | fgets(symData, 81, fd); | ~~~~~^~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:42: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:49: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘angular_momentum_expon’: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:545:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 545 | for (i=0; ifile, " Ene= %f\n", &orbenergy); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:1166:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1166 | fscanf(data->file, " Spin= %s\n", spin); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:1167:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1167 | fscanf(data->file, " Occup= %f\n", &occu); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘eatline’: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:840:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 840 | fgets(readbuf, 1024, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c: In function ‘open_molden_read’: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:224:11: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 224 | fscanf(data->file, "%d", &natm); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1097:13: warning: ‘whereami’ defined but not used [-Wunused-function] 1097 | static void whereami(FILE *file) { | ^~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1077:13: warning: ‘thisline’ defined but not used [-Wunused-function] 1077 | static void thisline(FILE *file) { | ^~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:1006:12: warning: ‘have_keyline’ defined but not used [-Wunused-function] 1006 | static int have_keyline(FILE *file, const char *keystring1, | ^~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:711:12: warning: ‘symmetry_expand’ defined but not used [-Wunused-function] 711 | static int symmetry_expand(qm_atom_t **atoms, int numunique, int natoms, | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:585:13: warning: ‘print_matrix4’ defined but not used [-Wunused-function] 585 | static void print_matrix4(const float mat[16]) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:507:13: warning: ‘del_wavefunction’ defined but not used [-Wunused-function] 507 | static void del_wavefunction(qm_timestep_t *ts) { | ^~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:490:13: warning: ‘replace_wavefunction’ defined but not used [-Wunused-function] 490 | static void replace_wavefunction(qm_timestep_t *ts, int n) { | ^~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:48: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: ‘get_pte_idx’ defined but not used [-Wunused-function] 133 | static int get_pte_idx(const char *label) | ^~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:109:14: warning: ‘get_pte_vdw_radius’ defined but not used [-Wunused-function] 109 | static float get_pte_vdw_radius(const int idx) | ^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:102:14: warning: ‘get_pte_mass’ defined but not used [-Wunused-function] 102 | static float get_pte_mass(const int idx) | ^~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: ‘get_pte_label’ defined but not used [-Wunused-function] 95 | static const char *get_pte_label(const int idx) | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp: In function ‘open_ccp4_read(char const*, char const*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:279:3: warning: ‘dataOffset’ may be used uninitialized [-Wmaybe-uninitialized] 279 | if (dataOffset != (CCP4HDSIZE + symBytes)) { | ^~ contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:89:8: note: ‘dataOffset’ was declared here 89 | long dataOffset, filesize; | ^~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c: In function ‘read_molden_structure’: contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:350:7: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation] 350 | strncpy(atom->type, atname, sizeof(atom->type)); | ^ contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:351:7: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation] 351 | strncpy(atom->name, atname, sizeof(atom->name)); | ^ contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:317:7: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation] 317 | strncpy(atom->name, atname, sizeof(atom->name)); | ^ contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:326:7: warning: ‘strncpy’ output may be truncated copying 11 bytes from a string of length 1023 [-Wstringop-truncation] 326 | strncpy(data->atoms[i].type, atname, sizeof(data->atoms[i].type)); | ^ contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: In function ‘void* open_cube_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:175:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 175 | fgets(readbuf, 1023, cube->fd); // go on to next line | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:181:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 181 | fgets(readbuf, 1023, cube->fd); // skip second header line | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:326:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 326 | fgets(readbuf, 1023, cube->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:337:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 337 | fgets(readbuf, 1023, cube->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:339:11: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 339 | fscanf(cube->fd, "%d", &cube->nsets); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:344:13: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 344 | fscanf(cube->fd, "%d", &orb); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:349:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 349 | fgets(readbuf, 1023, cube->fd); // gobble up rest of line | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: At global scope: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:107:13: warning: ‘void cube_buildrotmat(cube_t*, float*, float*, float*)’ defined but not used [-Wunused-function] 107 | static void cube_buildrotmat(cube_t *cube, float *o, float *a, float *b) | ^~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:42: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘int get_pte_idx_from_string(const char*)’ defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: ‘int get_pte_idx(const char*)’ defined but not used [-Wunused-function] 133 | static int get_pte_idx(const char *label) | ^~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: In function ‘open_cube_read(char const*, char const*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:179:10: warning: ‘__strncat_chk’ output may be truncated copying 240 bytes from a string of length 1023 [-Wstringop-truncation] 179 | strncat(voltmpl.dataname, readbuf, 240); // 240 is max space left after | ^ contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp: In function ‘int read_rawgraphics(void*, int*, const molfile_graphics_t**)’: contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:91:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 91 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:116:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 116 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:132:9: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 132 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:149:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 149 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:155:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 155 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:161:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 161 | fgets(line, 80, infile); //one more read to keep us in sync | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:170:27: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 170 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:217:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 217 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:237:23: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 237 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:256:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 256 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:51: contrib/uiuc/plugins/molfile_plugin/src/fastio.h: In function ‘fio_readv’: contrib/uiuc/plugins/molfile_plugin/src/fastio.h:519:14: warning: comparison of integer expressions of different signedness: ‘fio_size_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 519 | if (rc != iov[i].iov_len) | ^~ contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c: In function ‘read_dcdheader’: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:191:57: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 191 | } else if (input_integer[0] == 84 && input_integer[1] == dcdcordmagic) { | ^~ contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:204:54: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 204 | if (input_integer[0] == 84 && input_integer[1] == dcdcordmagic) { | ^~ contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:222:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 222 | if (input_integer[0] != dcdcordmagic) { | ^~ contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:399:45: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 399 | if ((input_integer[0]+input_integer[1]) != ((*N)-(*NAMNF))*4) { | ^~ contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:416:45: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 416 | if ((input_integer[0]+input_integer[1]) != ((*N)-(*NAMNF))*4) { | ^~ contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c: In function ‘read_dcdstep’: contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:621:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 621 | if (tmpbuf[i] != sizeof(float)*N) return DCD_BADFORMAT; | ^~ contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:625:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 625 | if ((tmpbuf[2*i]+tmpbuf[2*i+1]) != sizeof(float)*N) return DCD_BADFORMAT; | ^~ contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:546:16: warning: variable ‘readlen’ set but not used [-Wunused-but-set-variable] 546 | fio_size_t readlen; /* number of bytes actually read */ | ^~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:60: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘swap2_aligned’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘swap2_unaligned’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/fastio.h:609:12: warning: ‘fio_write_str’ defined but not used [-Wunused-function] 609 | static int fio_write_str(fio_fd fd, const char *str) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/fastio.h:605:12: warning: ‘fio_read_int32’ defined but not used [-Wunused-function] 605 | static int fio_read_int32(fio_fd fd, int *i) { | ^~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/fastio.h:459:19: warning: ‘fio_readv’ defined but not used [-Wunused-function] 459 | static fio_size_t fio_readv(fio_fd fd, const fio_iovec * iov, int iovcnt) { | ^~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function ‘read_next_timestep’: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:103:10: warning: variable ‘numatoms’ set but not used [-Wunused-but-set-variable] 103 | int i, numatoms; | ^~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function ‘write_timestep’: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:206:55: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 206 | if (fwrite(tmp, sizeof(double), 3*n, namdbin->fd) != 3*n) { | ^~ contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function ‘open_namdbin_read’: contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:78:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 78 | fread(&filen, sizeof(namdbin_int32), 1, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c: In function ‘read_mmtk_cdf_structure’: contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c:730:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 730 | if (len > sizeof(name)) { | ^ contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c: In function ‘read_mmtk_cdf_timestep’: contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c:1060:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1060 | for (i=0; i<(3 * mmtk->atom_numberdim); i++) { | ^ contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function ‘read_dlpoly_config_structure’: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:292:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 292 | if (NULL == fgets(fbuffer, 1024, data->file)) | ^~ contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:295:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 295 | if (NULL == fgets(fbuffer, 1024, data->file)) | ^~ contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function ‘read_dlpoly_config_timestep’: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:669:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 669 | fgets(fbuffer, 1024, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function ‘read_dlpoly_timestep’: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:554:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 554 | fgets(fbuffer, 1024, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function ‘read_dlpoly_config_structure’: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:362:5: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 4095 [-Wstringop-truncation] 362 | strncpy(atom->name, buf, sizeof(atom->name)); | ^ contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function ‘read_dlpoly_structure’: contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:267:5: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 4095 [-Wstringop-truncation] 267 | strncpy(atom->name, buf, sizeof(atom->name)); | ^ contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp: In function ‘int read_dsn6_data(void*, int, float*, float*)’: contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:233:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 233 | fread(brick, sizeof(char), 512, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp: In function ‘void* open_dsn6_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:91:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 91 | fread(fileHeader, sizeof(short), 19, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:63: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110:13: warning: ‘void swap4_aligned(void*, long int)’ defined but not used [-Wunused-function] 110 | static void swap4_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp: In function ‘int read_parm7_structure(void*, int*, molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:78:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 78 | fgets(buf, 85, file); | ~~~~~^~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:25: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘int parse_parm7_atoms(const char*, int, molfile_atom_t*, FILE*)’: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:204:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 204 | fgets(buf, 85, file); | ~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘int parse_parm7_atype(const char*, int, molfile_atom_t*, FILE*)’: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:257:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 257 | fgets(buf, 85, file); | ~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘int parse_parm7_resnames(const char*, int, char*, FILE*)’: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:275:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 275 | fgets(buf, 85, file); | ~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘int parse_parm7_respointers(const char*, int, molfile_atom_t*, int, const char*, FILE*)’: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:289:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 289 | fscanf(file, " %d", &cur); | ~~~~~~^~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘parmstruct* read_parm7_header(FILE*)’: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:368:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 368 | fgets(sdum, 512, file); | ~~~~~^~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:371:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 371 | fscanf(file, "%s\n", sdum); // "%FLAG" | ~~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:378:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 378 | fscanf(file, "%s\n", sdum); // "TITLE" or "CTITLE" | ~~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:385:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 385 | fscanf(file, "%s\n", sdum); // "FORMAT (20a4)" | ~~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:399:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 399 | fgets(prm->title, sizeof(prm->title), file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:427:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 427 | fgets(sdum, sizeof(sdum), file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:439:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 439 | fscanf(file,parm7, | ~~~~~~^~~~~~~~~~~~ 440 | &prm->Natom, &prm->Ntypes, &prm->Nbonh, &prm->Nbona, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 | &prm->Ntheth, &prm->Ntheta, &prm->Nphih, &prm->Nphia, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 | &prm->Jparm, &prm->Nparm); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:443:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 443 | fscanf(file, parm7, | ~~~~~~^~~~~~~~~~~~~ 444 | &prm->Nnb, &prm->Nres, &prm->Mbona, &prm->Mtheta, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 | &prm->Mphia, &prm->Numbnd, &prm->Numang, &prm->Mptra, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 | &prm->Natyp, &prm->Nphb); | ~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:447:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 447 | fscanf(file, parm7, &prm->Ifpert, &prm->Nbper, &prm->Ngper, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 | &prm->Ndper, &prm->Mbper, &prm->Mgper, &prm->Mdper, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 | &prm->IfBox, &prm->Nmxrs, &prm->IfCap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:451:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 451 | fscanf(file,"%8d",&prm->Numextra); //BB | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘int read_parm7_flag(FILE*, const char*, const char*)’: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:79:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 79 | fscanf(file, "%s\n", buf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:87:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 87 | fscanf(file, "%s\n", buf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:97:9: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fscanf(file, "%s\n", buf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h: In function ‘read_parm7_structure(void*, int*, molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:277:12: warning: ‘__strncpy_chk’ output may be truncated copying 4 bytes from a string of length 84 [-Wstringop-truncation] 277 | strncpy(resnames, buf+4*j, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:259:12: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 84 [-Wstringop-truncation] 259 | strncpy(atom->type, buf+4*j, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:206:12: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 84 [-Wstringop-truncation] 206 | strncpy(atom->name, buf+4*j, 4); | ^ In file included from contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp:24: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h: In member function ‘int {anonymous}::ReadPARM::readparm(FILE*)’: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:435:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 435 | fscanf(file, " " DBLFMT, &prm->Charges[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:444:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 444 | fscanf(file, " " DBLFMT, &prm->Masses[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:510:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 510 | fscanf(file, " " DBLFMT, &prm->Rk[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:517:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(file, " " DBLFMT, &prm->Req[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:524:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 524 | fscanf(file, " " DBLFMT, &prm->Tk[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:531:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 531 | fscanf(file, " " DBLFMT, &prm->Teq[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:538:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 538 | fscanf(file, " " DBLFMT, &prm->Pk[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:545:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 545 | fscanf(file, " " DBLFMT, &prm->Pn[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:552:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 552 | fscanf(file, " " DBLFMT, &prm->Phase[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:559:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 559 | fscanf(file, " " DBLFMT, &prm->Solty[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:567:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 567 | fscanf(file, " " DBLFMT, &prm->Cn1[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:575:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 575 | fscanf(file, " " DBLFMT, &prm->Cn2[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:756:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 756 | fscanf(file, " " DBLFMT, &prm->HB12[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:763:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 763 | fscanf(file, " " DBLFMT, &prm->HB6[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:771:17: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 771 | fscanf(file, " " DBLFMT, &H[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:853:23: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 853 | fscanf(file, " " DBLFMT " " DBLFMT " " DBLFMT, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 | &prm->Box[0], &prm->Box[1], &prm->Box[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:867:23: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 867 | fscanf(file, " %d " DBLFMT " " DBLFMT " " DBLFMT " " DBLFMT, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 868 | &prm->Natcap, &prm->Cutcap, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 | &prm->Xcap, &prm->Ycap, &prm->Zcap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:71: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110:13: warning: ‘void swap4_aligned(void*, long int)’ defined but not used [-Wunused-function] 110 | static void swap4_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:70: contrib/uiuc/plugins/molfile_plugin/src/vmddir.h:145:12: warning: ‘int vmd_file_is_executable(const char*)’ defined but not used [-Wunused-function] 145 | static int vmd_file_is_executable(const char * filename) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp:53: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c:32: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: ‘get_pte_idx’ defined but not used [-Wunused-function] 133 | static int get_pte_idx(const char *label) | ^~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c:31: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h: In function ‘read_next_timestep’: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:119:3: warning: ‘strncpy’ output may be truncated copying 80 bytes from a string of length 82 [-Wstringop-truncation] 119 | strncpy(tmp, record, PDB_RECORD_LENGTH); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:144:5: warning: ‘strncpy’ output may be truncated copying 8 bytes from a string of length 52 [-Wstringop-truncation] 144 | strncpy(numstr, record + 30, 8); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:149:5: warning: ‘strncpy’ output may be truncated copying 8 bytes from a string of length 44 [-Wstringop-truncation] 149 | strncpy(numstr+10, record + 38, 8); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:154:5: warning: ‘strncpy’ output may be truncated copying 8 bytes from a string of length 36 [-Wstringop-truncation] 154 | strncpy(numstr+20, record + 46, 8); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:159:5: warning: ‘strncpy’ output may be truncated copying 6 bytes from a string of length 28 [-Wstringop-truncation] 159 | strncpy(numstr+30, record + 54, 6); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:164:5: warning: ‘strncpy’ output may be truncated copying 6 bytes from a string of length 22 [-Wstringop-truncation] 164 | strncpy(numstr+40, record + 60, 6); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h: In function ‘open_pdb_read’: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:190:5: warning: ‘strncpy’ output may be truncated copying 9 bytes from a string of length 32 [-Wstringop-truncation] 190 | strncpy(date, record + 50, 9); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:200:5: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 20 [-Wstringop-truncation] 200 | strncpy(pdbcode, record + 62, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h: In function ‘read_pdb_structure’: contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:299:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 70 [-Wstringop-truncation] 299 | strncpy(name, record + 12, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:304:3: warning: ‘strncpy’ output may be truncated copying 1 byte from a string of length 66 [-Wstringop-truncation] 304 | strncpy(altloc, record + 16, 1); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:308:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 65 [-Wstringop-truncation] 308 | strncpy(resname, record + 17, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:317:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 60 [-Wstringop-truncation] 317 | strncpy(resid, record + 22, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:159:5: warning: ‘strncpy’ output may be truncated copying 6 bytes from a string of length 28 [-Wstringop-truncation] 159 | strncpy(numstr+30, record + 54, 6); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:164:5: warning: ‘strncpy’ output may be truncated copying 6 bytes from a string of length 22 [-Wstringop-truncation] 164 | strncpy(numstr+40, record + 60, 6); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:330:5: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 10 [-Wstringop-truncation] 330 | strncpy(segname, record + 72, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:339:5: warning: ‘strncpy’ output may be truncated copying 2 bytes from a string of length 6 [-Wstringop-truncation] 339 | strncpy(elementsymbol, record + 76, 2); | ^ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int getUniqueResID(char*, int)’: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:443:7: warning: unused variable ‘i’ [-Wunused-variable] 443 | int i, uid; | ^ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int parseStructureFaster(molfile_atom_t*, int*, pdbxParser*)’: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:484:47: warning: unused variable ‘j’ [-Wunused-variable] 484 | int i, count, atomdata, pos, idx, xyzcount, j; | ^ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:503:8: warning: unused variable ‘oldChain’ [-Wunused-variable] 503 | char oldChain[8]; | ^~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readAngleBonds(molfile_atom_t*, pdbxParser*)’: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:803:7: warning: unused variable ‘bondTable’ [-Wunused-variable] 803 | int bondTable[32]; | ^~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:807:15: warning: unused variable ‘j’ [-Wunused-variable] 807 | int i, pos, j, k; | ^ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:811:8: warning: unused variable ‘modelNum’ [-Wunused-variable] 811 | char modelNum[8]; | ^~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:822:20: warning: unused variable ‘atom’ [-Wunused-variable] 822 | molfile_atom_t * atom; | ^~~~ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:884:7: warning: unused variable ‘test’ [-Wunused-variable] 884 | int test = parser->nbonds + bnum; | ^~~~ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readRMSDBonds(molfile_atom_t*, pdbxParser*)’: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:984:7: warning: unused variable ‘bondTable’ [-Wunused-variable] 984 | int bondTable[32]; | ^~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:988:15: warning: unused variable ‘j’ [-Wunused-variable] 988 | int i, pos, j, k; | ^ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:991:8: warning: unused variable ‘modelNum’ [-Wunused-variable] 991 | char modelNum[8]; | ^~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1002:20: warning: unused variable ‘atom’ [-Wunused-variable] 1002 | molfile_atom_t * atom; | ^~~~ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘void* open_file_write(const char*, const char*, int)’: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1409:9: warning: unused variable ‘fd’ [-Wunused-variable] 1409 | FILE* fd; | ^~ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: At global scope: contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:313:14: warning: ‘float stringToFloat(char*)’ defined but not used [-Wunused-function] 313 | static float stringToFloat(char * str) { | ^~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:25: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: ‘int get_pte_idx(const char*)’ defined but not used [-Wunused-function] 133 | static int get_pte_idx(const char *label) | ^~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:95:20: warning: ‘const char* get_pte_label(int)’ defined but not used [-Wunused-function] 95 | static const char *get_pte_label(const int idx) | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp: In function ‘read_phi_data(void*, int, float*, float*)’: contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp:216:14: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 84 [-Wstringop-truncation] 216 | strncpy(currNum, currChar, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp: In function ‘int read_plt_data(void*, int, float*, float*)’: contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:143:51: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | if ( fread(datablock, sizeof(float), ndata, fd) != ndata ) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp: In function ‘void* open_plt_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:69:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 69 | fread(intHeader, sizeof(int), 5, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:82:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 82 | fread(floatHeader, sizeof(float), 6, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:42: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:30: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void put_element_ply(PlyFile*, void*)’: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:459:7: warning: unused variable ‘i’ [-Wunused-variable] 459 | int i,j,k; | ^ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void ascii_get_element(PlyFile*, char*)’: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1407:7: warning: unused variable ‘i’ [-Wunused-variable] 1407 | int i,j,k; | ^ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void binary_get_element(PlyFile*, char*)’: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1541:7: warning: unused variable ‘i’ [-Wunused-variable] 1541 | int i,j,k; | ^ contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp: In function ‘int read_rawgraphics(void*, int*, const molfile_graphics_t**)’: contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:107:17: warning: variable ‘vert_other’ set but not used [-Wunused-but-set-variable] 107 | PlyOtherProp *vert_other=NULL; | ^~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:108:17: warning: variable ‘face_other’ set but not used [-Wunused-but-set-variable] 108 | PlyOtherProp *face_other=NULL; | ^~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void binary_get_element(PlyFile*, char*)’: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1629:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1629 | fread (&len, sizeof(int), 1, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1631:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1631 | fread (str, len, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void get_binary_item(FILE*, int, int*, unsigned int*, double*)’: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2057:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2057 | fread (ptr, 1, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2063:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2063 | fread (ptr, 1, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2069:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2069 | fread (ptr, 2, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2075:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2075 | fread (ptr, 2, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2081:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2081 | fread (ptr, 4, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2087:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2087 | fread (ptr, 4, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2093:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2093 | fread (ptr, 4, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2099:13: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2099 | fread (ptr, 8, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:27: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:110:13: warning: ‘void swap4_aligned(void*, long int)’ defined but not used [-Wunused-function] 110 | static void swap4_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘recreate_command_line’: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1334 | line[0] = '\0'; | ~~~~~~~~^~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by ‘malloc’ 1333 | line = (char *) malloc (sizeof(char) * len); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘DDmkdir(std::__cxx11::basic_string, std::allocator > const&, unsigned int, int, int)’: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:23: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 714 | sprintf(sub, "%03x/", i); | ^~~~ contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:22: note: directive argument in the range [0, 2147483646] 714 | sprintf(sub, "%03x/", i); | ^~~~~~~ In file included from /usr/include/stdio.h:980, from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.hxx:56, from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:47: In function ‘*__sprintfieee128’, inlined from ‘DDmkdir(std::__cxx11::basic_string, std::allocator > const&, unsigned int, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:9: /usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chkieee128’ output between 5 and 10 bytes into a destination of size 6 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘DDmkdir(std::__cxx11::basic_string, std::allocator > const&, unsigned int, int, int)’: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:30: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 722 | sprintf(subsub, "%03x", j); | ^~~~ contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:29: note: directive argument in the range [0, 2147483646] 722 | sprintf(subsub, "%03x", j); | ^~~~~~ In function ‘*__sprintfieee128’, inlined from ‘DDmkdir(std::__cxx11::basic_string, std::allocator > const&, unsigned int, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:13: /usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chkieee128’ output between 4 and 9 bytes into a destination of size 6 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘ascii_get_element(PlyFile*, char*)’: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1520:14: warning: ‘other_data’ may be used uninitialized [-Wmaybe-uninitialized] 1520 | item = elem_data + prop->offset; | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1423:9: note: ‘other_data’ was declared here 1423 | char *other_data; | ^~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1497:18: warning: ‘item’ may be used uninitialized [-Wmaybe-uninitialized] 1497 | item += item_size; | ~~~~~^~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1413:20: note: ‘item’ was declared here 1413 | char *elem_data,*item; | ^~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘binary_get_element(PlyFile*, char*)’: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1643:14: warning: ‘other_data’ may be used uninitialized [-Wmaybe-uninitialized] 1643 | item = elem_data + prop->offset; | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1555:9: note: ‘other_data’ was declared here 1555 | char *other_data; | ^~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1620:18: warning: ‘item’ may be used uninitialized [-Wmaybe-uninitialized] 1620 | item += item_size; | ~~~~~^~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1546:9: note: ‘item’ was declared here 1546 | char *item; | ^~~~ contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c: In function ‘get_atom_radius’: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:166:16: warning: variable ‘type’ set but not used [-Wunused-but-set-variable] 166 | char *name, *type; | ^~~~ contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:166:9: warning: variable ‘name’ set but not used [-Wunused-but-set-variable] 166 | char *name, *type; | ^~~~ contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c: In function ‘read_pqr_timestep’: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:109:3: warning: ‘strncpy’ output may be truncated copying 80 bytes from a string of length 81 [-Wstringop-truncation] 109 | strncpy(tmp, record, PQR_RECORD_LENGTH); | ^ contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c: In function ‘read_pqr_structure’: contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:137:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 68 [-Wstringop-truncation] 137 | strncpy(name, record+12, 4); name[4] = 0; | ^ contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:138:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 63 [-Wstringop-truncation] 138 | strncpy(resname, record+17, 4); resname[4] = 0; | ^ contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:139:3: warning: ‘strncpy’ output may be truncated copying 1 byte from a string of length 59 [-Wstringop-truncation] 139 | strncpy(chain, record+21, 1); chain[1] = 0; | ^ contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:140:3: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 58 [-Wstringop-truncation] 140 | strncpy(resid, record+22, 4); resid[4] = 0; | ^ contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c: In function ‘write_psf_structure’: contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c:782:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 782 | if (strlen(atoms[i].type) > fw) { | ^ In file included from contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c:30: contrib/uiuc/plugins/molfile_plugin/src/fortread.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/fortread.h:103:12: warning: ‘fortread_4’ defined but not used [-Wunused-function] 103 | static int fortread_4(void *dest, int n, int swap, FILE *fd) { | ^~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: ‘fort_get_endian_reclen’ defined but not used [-Wunused-function] 55 | static int fort_get_endian_reclen(int reclen, int word0, int word1, | ^~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: ‘fort_eat_recmark’ defined but not used [-Wunused-function] 36 | static int fort_eat_recmark(FILE *ifp, int recmarklen) { | ^~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/fortread.h:28: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘swap8_aligned’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘swap2_aligned’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘swap8_unaligned’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘swap4_unaligned’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘swap2_unaligned’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘framefile(std::__cxx11::basic_string, std::allocator > const&, unsigned long, unsigned long, int, int)’: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:35: warning: ‘__sprintf_chkieee128’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 675 | sprintf(answer, "%03x/", d1); | ^ In function ‘*__sprintfieee128’, inlined from ‘DDreldir(std::__cxx11::basic_string, std::allocator > const&, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:13, inlined from ‘framefile(std::__cxx11::basic_string, std::allocator > const&, unsigned long, unsigned long, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: /usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chkieee128’ output between 5 and 10 bytes into a destination of size 9 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘framefile(std::__cxx11::basic_string, std::allocator > const&, unsigned long, unsigned long, int, int)’: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:35: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size between 0 and 5 [-Wformat-overflow=] 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ^~~~ In function ‘DDreldir(std::__cxx11::basic_string, std::allocator > const&, int, int)’, inlined from ‘framefile(std::__cxx11::basic_string, std::allocator > const&, unsigned long, unsigned long, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:29: note: directive argument in the range [0, 2147483646] 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ^~~~~~~~~~~~ In function ‘*__sprintfieee128’, inlined from ‘DDreldir(std::__cxx11::basic_string, std::allocator > const&, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:13, inlined from ‘framefile(std::__cxx11::basic_string, std::allocator > const&, unsigned long, unsigned long, int, int)’ at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: /usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chkieee128’ output between 9 and 19 bytes into a destination of size 9 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c: In function ‘open_rst_read’: contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:48:11: warning: variable ‘timesteprst’ set but not used [-Wunused-but-set-variable] 48 | double timesteprst; | ^~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:67:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 67 | fgets(title, 82, fd); | ^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:70:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 70 | fgets(line, 82, fd); | ^~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp: In function ‘int read_spider_data(void*, int, float*, float*)’: contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:286:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 286 | fread(datablock, total * sizeof(float), 1, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:36: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function ‘int read_edm_data(void*, int, float*, float*)’: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:240:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 240 | fgets(readbuf, 13, edm->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function ‘void eatline(FILE*)’: contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:44:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 44 | fgets(readbuf, 1024, fd); // go on to next line | ~~~~~^~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp: In function ‘int read_rawgraphics(void*, int*, const molfile_graphics_t**)’: contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:96:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 96 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:104:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 104 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:119:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 119 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:131:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:153:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 153 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:162:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 162 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:171:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 171 | fgets(line, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c: In function ‘read_tinker_structure’: contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c:103:5: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation] 103 | strncpy(atom->name, buffer, sizeof(atom->name)); | ^ contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp: In function ‘void* open_fs4_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:79:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 79 | fread(&dataBegin, sizeof(int), 1, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:48: contrib/uiuc/plugins/molfile_plugin/src/fortread.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/fortread.h:133:13: warning: ‘void strnwscpy(char*, const char*, int)’ defined but not used [-Wunused-function] 133 | static void strnwscpy(char *target, const char *source, const int len) { | ^~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: ‘int fort_get_endian_reclen(int, int, int, int*, int*)’ defined but not used [-Wunused-function] 55 | static int fort_get_endian_reclen(int reclen, int word0, int word1, | ^~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: ‘int fort_eat_recmark(FILE*, int)’ defined but not used [-Wunused-function] 36 | static int fort_eat_recmark(FILE *ifp, int recmarklen) { | ^~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:47: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘angular_momentum_expon’: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:545:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 545 | for (i=0; ifile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c: In function ‘read_vasp5xdatcar_structure’: contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:174:27: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 174 | for (i = 0; i < 2; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:180:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 180 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:189:26: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 189 | for (i = 0; i < 3; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:194:4: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 194 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:204:26: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 204 | for (i = 0; i < 8; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c: In function ‘open_vasp5xdatcar_read’: contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:69:27: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 69 | for (i = 0; i < 5; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:72:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 72 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:77:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 77 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:40: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘read_gamess_rundata’: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:615:3: warning: ‘strncpy’ output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation] 615 | strncpy(sys_data->basis_string, data->basis_string, | ^ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:620:3: warning: ‘strncpy’ output may be truncated copying 4096 bytes from a string of length 8191 [-Wstringop-truncation] 620 | strncpy(sys_data->runtitle, data->runtitle, sizeof(sys_data->runtitle)); | ^ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:621:3: warning: ‘strncpy’ output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation] 621 | strncpy(sys_data->geometry, data->geometry, sizeof(sys_data->geometry)); | ^ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:622:3: warning: ‘strncpy’ output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation] 622 | strncpy(sys_data->version_string, data->version_string, | ^ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_coordinates’: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1618:5: warning: ‘strncpy’ output may be truncated copying 11 bytes from a string of length 8191 [-Wstringop-truncation] 1618 | strncpy(atm->type, atname, sizeof(atm->type)); | ^ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_runtitle’: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1459:3: warning: ‘strncpy’ specified bound 8192 equals destination size [-Wstringop-truncation] 1459 | strncpy(data->runtitle,trimright(buffer),sizeof(data->runtitle)); | ^ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_contrl’: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1981:3: warning: ‘strncpy’ specified bound 8192 equals destination size [-Wstringop-truncation] 1981 | strncpy(data->geometry, trimright(temp+7), sizeof(data->geometry)); | ^ contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c: In function ‘read_vaspchgcar_data’: contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:237:60: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 237 | for (n = 0; n < data->numatoms + data->version + 5; ++n) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:282:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 282 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c: In function ‘read_vaspchgcar_metadata’: contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:150:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 150 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c: In function ‘open_vaspchgcar_read’: contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:71:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 71 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:75:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 75 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:81:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 81 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:92:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 92 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:103:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 103 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:131:44: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | for (i = 0; i < data->numatoms + 2; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:41: contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:111:13: warning: ‘vasp_timestep_unitcell’ defined but not used [-Wunused-function] 111 | static void vasp_timestep_unitcell(molfile_timestep_t *ts, vasp_plugindata_t *data) | ^~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_contrl_firefly’: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1818:3: warning: ‘strncpy’ specified bound 8192 equals destination size [-Wstringop-truncation] 1818 | strncpy(data->geometry, trimright(temp+7), sizeof(data->geometry)); | ^ contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function ‘read_vaspoutcar_timestep’: contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:239:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 239 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:242:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 242 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function ‘read_vaspoutcar_structure’: contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:204:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 204 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function ‘open_vaspoutcar_read’: contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:87:10: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 87 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:40: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_basis_options’: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1422:5: warning: ‘__strncat_chk’ output may be truncated copying 1 byte from a string of length 9 [-Wstringop-truncation] 1422 | strncat(data->basis_string, &data->gbasis[3], 1); | ^ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1411:5: warning: ‘__strncat_chk’ output may be truncated copying 1 byte from a string of length 9 [-Wstringop-truncation] 1411 | strncat(data->basis_string, &data->gbasis[2], 1); | ^ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_proc_mem.isra.0’: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1279:5: warning: ‘strncpy’ output may be truncated copying 256 bytes from a string of length 8191 [-Wstringop-truncation] 1279 | strncpy(data->memory,&word[2][0],sizeof(data->memory)); | ^ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1272:5: warning: ‘strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 1272 | strncpy(data->memory,trimright(temp),sizeof(data->memory)); | ^ contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c: In function ‘read_vaspparchg_data’: contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:238:60: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 238 | for (n = 0; n < data->numatoms + data->version + 5; ++n) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c: In function ‘read_vaspparchg_metadata’: contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:150:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 150 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c: In function ‘open_vaspparchg_read’: contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:71:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 71 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:75:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 75 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:81:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 81 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:92:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 92 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:103:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 103 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:131:44: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | for (i = 0; i < data->numatoms + 2; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:41: contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:111:13: warning: ‘vasp_timestep_unitcell’ defined but not used [-Wunused-function] 111 | static void vasp_timestep_unitcell(molfile_timestep_t *ts, vasp_plugindata_t *data) | ^~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function ‘write_vaspposcar_timestep’: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:360:40: warning: argument to ‘sizeof’ in ‘strncpy’ call is the same expression as the source; did you mean to use the size of the destination? [-Wsizeof-pointer-memaccess] 360 | strncpy(tmptype, atom->type, sizeof(atom->type)); | ^ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function ‘read_vaspposcar_timestep’: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:232:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 232 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:237:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 237 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:246:43: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 246 | for (i = 0; i < data->version - 2; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:249:35: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 249 | if (tolower(lineptr[0]) == 's') fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:256:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 256 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function ‘read_vaspposcar_structure’: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:195:42: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 195 | for (i = 0; i < data->version + 3; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:198:34: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 198 | if (tolower(lineptr[0]) == 's') fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:203:4: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 203 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c: In function ‘open_vaspposcar_read’: contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:69:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 69 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:73:27: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 73 | for (i = 0; i < 5; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:87:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 87 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c:40: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function ‘get_input_structure’: contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1682:5: warning: ‘strncpy’ output may be truncated copying 11 bytes from a string of length 8191 [-Wstringop-truncation] 1682 | strncpy(atm->type, atname, sizeof(atm->type)); | ^ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function ‘get_traj_frame.isra.0’: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:819:5: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 10 [-Wstringop-truncation] 819 | strncpy((*atoms)[i].type, (*atoms)[indexmap[i]].type, 10); | ^ contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c: In function ‘read_vaspxdatcar_timestep’: contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:283:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 283 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c: In function ‘read_vaspxdatcar_structure’: contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:228:27: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 228 | for (i = 0; i < 4; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:233:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 233 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:237:32: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 237 | for (i = 0; i < 2; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:252:44: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 252 | for (i = 0; i < 10 - data->version; ++i) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c: In function ‘open_vaspxdatcar_read’: contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:89:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 89 | fgets(lineptr, LINESIZE, poscar); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:92:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 92 | fgets(lineptr, LINESIZE, poscar); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:97:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fgets(lineptr, LINESIZE, poscar); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:111:3: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 111 | fgets(lineptr, LINESIZE, poscar); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:121:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 121 | fgets(lineptr, LINESIZE, poscar); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:40: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c: In function ‘read_vaspxml_structure’: contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:139:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 139 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:144:9: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 144 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c: In function ‘open_vaspxml_read’: contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:86:8: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 86 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:92:8: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 92 | fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:47: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp: In function ‘void line3(FILE*, GRASSP*)’: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:186:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 186 | fread(line3, 1, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp: In function ‘int read_rawgraphics(void*, int*, const molfile_graphics_t**)’: contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:284:3: note: in expansion of macro ‘TRASH’ 284 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:285:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 285 | fread(line, 1, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:291:3: note: in expansion of macro ‘TRASH’ 291 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:305:3: note: in expansion of macro ‘TRASH’ 305 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:306:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 306 | fread(line, 1, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:307:3: note: in expansion of macro ‘TRASH’ 307 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:311:3: note: in expansion of macro ‘TRASH’ 311 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:313:3: note: in expansion of macro ‘TRASH’ 313 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:318:3: note: in expansion of macro ‘TRASH’ 318 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:319:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 319 | fread(line, 1, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:320:3: note: in expansion of macro ‘TRASH’ 320 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:328:3: note: in expansion of macro ‘TRASH’ 328 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:329:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 329 | fread(line, 1, 80, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:330:3: note: in expansion of macro ‘TRASH’ 330 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:354:3: note: in expansion of macro ‘TRASH’ 354 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:355:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 355 | fread(vertex, 3 * sizeof(float), nvert, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:356:3: note: in expansion of macro ‘TRASH’ 356 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:357:3: note: in expansion of macro ‘TRASH’ 357 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:358:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 358 | fread(access, 3 * sizeof(float), nvert, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:359:3: note: in expansion of macro ‘TRASH’ 359 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:360:3: note: in expansion of macro ‘TRASH’ 360 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:361:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 361 | fread(normal, 3 * sizeof(float), nvert, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:362:3: note: in expansion of macro ‘TRASH’ 362 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:371:5: note: in expansion of macro ‘TRASH’ 371 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:372:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 372 | fread(triangle, 3 * sizeof(int), ntriangles, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:373:5: note: in expansion of macro ‘TRASH’ 373 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:374:5: note: in expansion of macro ‘TRASH’ 374 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:375:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 375 | fread(properties, 3 * sizeof(float), nvert, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:394:5: note: in expansion of macro ‘TRASH’ 394 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:395:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 395 | fread(striangle, sizeof(short), 3 * ntriangles, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:396:5: note: in expansion of macro ‘TRASH’ 396 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:280:20: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 280 | #define TRASH fread(trash, 4, 1, infile) | ~~~~~^~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:397:5: note: in expansion of macro ‘TRASH’ 397 | TRASH; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:398:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 398 | fread(properties, sizeof(float), 3 * nvert, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:40: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp:51: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp: In function ‘void* open_grid_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:84:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 84 | fread(&dataBegin, sizeof(int), 1, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:60: contrib/uiuc/plugins/molfile_plugin/src/fortread.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/fortread.h:133:13: warning: ‘void strnwscpy(char*, const char*, int)’ defined but not used [-Wunused-function] 133 | static void strnwscpy(char *target, const char *source, const int len) { | ^~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/fortread.h:55:12: warning: ‘int fort_get_endian_reclen(int, int, int, int*, int*)’ defined but not used [-Wunused-function] 55 | static int fort_get_endian_reclen(int reclen, int word0, int word1, | ^~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/fortread.h:36:12: warning: ‘int fort_eat_recmark(FILE*, int)’ defined but not used [-Wunused-function] 36 | static int fort_eat_recmark(FILE *ifp, int recmarklen) { | ^~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp:59: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:124:13: warning: ‘void swap8_aligned(void*, long int)’ defined but not used [-Wunused-function] 124 | static void swap8_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c: In function ‘vtf_open_file_read’: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:538:9: warning: ‘__strncat_chk’ output may be truncated copying 200 bytes from a string of length 254 [-Wstringop-truncation] 538 | strncat(msg, keyword, 200); | ^ contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:629:7: warning: ‘__strncat_chk’ output may be truncated copying 200 bytes from a string of length 254 [-Wstringop-truncation] 629 | strncat(msg, keyword, 200); | ^ contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c: In function ‘vtf_read_bonds’: contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:147:48: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 147 | sprintf(message, "vtfplugin:%d: error: %s: \"%s\"\n", | ^~ In file included from contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp:30: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h: In function ‘int mdio_readline(md_file*, char*, int, int)’: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:426:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 426 | fgets(buf, n, mf->f); | ~~~~~^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function ‘int read_vtk_data(void*, int, float*, float*)’: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:276:45: warning: variable ‘total’ set but not used [-Wunused-but-set-variable] 276 | int x, y, z, xsize, ysize, zsize, xysize, total; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function ‘int read_vtk_data_ex(void*, molfile_volumetric_readwrite_t*)’: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:338:45: warning: variable ‘total’ set but not used [-Wunused-but-set-variable] 338 | int x, y, z, xsize, ysize, zsize, xysize, total; | ^~~~~ contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:371:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 371 | fscanf(fd, "%lf %lf %lf", &vx, &vy, &vz); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function ‘int read_vtk_data(void*, int, float*, float*)’: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:306:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 306 | fscanf(fd, "%lf %lf %lf", &vx, &vy, &vz); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:72: contrib/uiuc/plugins/include/vmdconio.h: At global scope: contrib/uiuc/plugins/include/vmdconio.h:56:12: warning: ‘int vmdcon_printf(int, const char*, ...)’ defined but not used [-Wunused-function] 56 | static int vmdcon_printf(int lvl, const char *fmt, ...) { | ^~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:48: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: ‘void swap2_aligned(void*, long int)’ defined but not used [-Wunused-function] 96 | static void swap2_aligned(void *v, long ndata) { | ^~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:65:13: warning: ‘void swap8_unaligned(void*, long int)’ defined but not used [-Wunused-function] 65 | static void swap8_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:46:13: warning: ‘void swap4_unaligned(void*, long int)’ defined but not used [-Wunused-function] 46 | static void swap4_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:32:13: warning: ‘void swap2_unaligned(void*, long int)’ defined but not used [-Wunused-function] 32 | static void swap2_unaligned(void *v, long ndata) { | ^~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function ‘open_vtk_read(char const*, char const*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:152:10: warning: ‘strncpy’ output may be truncated copying 256 bytes from a string of length 2039 [-Wstringop-truncation] 152 | strncpy(vtk->title, inbuf, sizeof(vtk->title) - 1); | ^ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘int read_xbgf_timestep(void*, int, molfile_timestep_t*)’: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:288:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 288 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:297:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 297 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘int read_xbgf_bonds_aux(void*, int*, int**, int**, float**)’: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:365:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 365 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:387:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 387 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:395:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 395 | fgets(nextline, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:455:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 455 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘int read_xbgf_structure(void*, int*, molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:241:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 241 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:250:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 250 | fgets(line, LINESIZE, bgf->file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘void* open_xbgf_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:72:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 72 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h: In function ‘g96_header(md_file*, char*, int, float*) [clone .constprop.0]’: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:650:39: warning: ‘strncpy’ output may be truncated copying 80 bytes from a string of length 500 [-Wstringop-truncation] 650 | if (title && titlelen) strncpy(title, buf, titlelen); | ^ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘read_xbgf_timestep(void*, int, molfile_timestep_t*)’: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:143:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 223 [-Wstringop-truncation] 143 | strncpy(numstr, record + 32, 10); | ^ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:148:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 213 [-Wstringop-truncation] 148 | strncpy(numstr+10, record + 42, 10); | ^ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:153:12: warning: ‘strncpy’ output may be truncated copying 10 bytes from a string of length 203 [-Wstringop-truncation] 153 | strncpy(numstr+20, record + 52, 10); | ^ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function ‘read_xbgf_structure(void*, int*, molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:172:10: warning: ‘strncpy’ output may be truncated copying 5 bytes from a string of length 241 [-Wstringop-truncation] 172 | strncpy(name, record + 14, 5); | ^ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:177:10: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 235 [-Wstringop-truncation] 177 | strncpy(resname, record + 20, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:182:10: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 154 [-Wstringop-truncation] 182 | strncpy(segname, record + 101, 4); | ^ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:197:10: warning: ‘strncpy’ output may be truncated copying 5 bytes from a string of length 192 [-Wstringop-truncation] 197 | strncpy(type, record+63, 5); | ^ contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h: In function ‘gro_header(md_file*, char*, int, float*, int*, int)’: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:1018:33: warning: ‘strncpy’ output may be truncated copying 80 bytes from a string of length 500 [-Wstringop-truncation] 1018 | if (title && titlelen) strncpy(title, buf, titlelen); | ^ contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp: In function ‘open_gro_read(char const*, char const*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp:103:12: warning: ‘strncpy’ output may be truncated copying 80 bytes from a string of length 80 [-Wstringop-truncation] 103 | strncpy(gmx->meta->title, mdh.title, 80); | ^ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function ‘void eatline(FILE*)’: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:238:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 238 | fgets(readbuf, 1024, fd); // go on to next line | ~~~~~^~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function ‘void* open_xsf_read(const char*, const char*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:408:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 408 | fgets(readbuf, 256, xsf->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:442:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 442 | fgets(readbuf, 256, xsf->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:444:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 444 | fgets(readbuf, 256, xsf->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:446:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 446 | fgets(readbuf, 256, xsf->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:448:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 448 | fgets(readbuf, 256, xsf->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:450:20: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 450 | fgets(readbuf, 256, xsf->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:473:22: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 473 | fgets(readbuf, 256, xsf->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:508:16: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 508 | fgets(readbuf, 256, xsf->fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:37: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At global scope: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘int get_pte_idx_from_string(const char*)’ defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function ‘read_xsf_structure(void*, int*, molfile_atom_t*)’: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:597:20: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation] 597 | strncpy(atom->name, buffer, sizeof(atom->name)); | ^ contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function ‘open_xsf_read(char const*, char const*, int*)’: contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:438:22: warning: ‘strncpy’ output may be truncated copying 255 bytes from a string of length 255 [-Wstringop-truncation] 438 | strncpy(set->dataname, readbuf, 255); | ^ In file included from contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:57: contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: ‘get_pte_idx_from_string’ defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c: In function ‘read_xyz_structure’: contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:133:7: warning: ‘strncpy’ output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation] 133 | strncpy(atom->name, buffer, sizeof(atom->name)); | ^ In file included from layer0/CarveHelper.cpp:8: layer0/CarveHelper.h: In constructor ‘CarveHelper::CarveHelper(PyMOLGlobals*, float, const float*, std::size_t)’: layer0/CarveHelper.h:23:9: warning: ‘CarveHelper::m_cutoff’ will be initialized after [-Wreorder] 23 | float m_cutoff; | ^~~~~~~~ layer0/CarveHelper.h:22:16: warning: ‘const float* CarveHelper::m_vertices’ [-Wreorder] 22 | const float* m_vertices; | ^~~~~~~~~~ layer0/CarveHelper.cpp:20:1: warning: when initialized here [-Wreorder] 20 | CarveHelper::CarveHelper(PyMOLGlobals* G, float cutoff, const float* vertices, | ^~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from layer0/Field.h:24, from layer0/Isosurf.h:24, from layer0/ContourSurf.cpp:11: layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {long unsigned int, long unsigned int, long unsigned int}]’: layer0/Field.h:114:19: required from ‘T& CField::get(SizeTs ...) [with T = float; SizeTs = {long unsigned int, long unsigned int, long unsigned int}]’ 114 | return *ptr(pos...); | ~~~~~~^~~~~~~~ layer0/ContourSurf.cpp:409:37: required from here 409 | return m_field->data->get( | ~~~~~~~~~~~~~~~~~~~~~~~~~^ 410 | x + m_offset[0], y + m_offset[1], z + m_offset[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {long unsigned int, long unsigned int, long unsigned int, int}]’: layer0/Field.h:114:19: required from ‘T& CField::get(SizeTs ...) [with T = float; SizeTs = {long unsigned int, long unsigned int, long unsigned int, int}]’ 114 | return *ptr(pos...); | ~~~~~~^~~~~~~~ layer0/ContourSurf.cpp:419:36: required from here 419 | m_field->points->get(x, y, z, 0), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.cpp: In function ‘PyObject* FieldAsNumPyArray(CField*, short int)’: layer0/Field.cpp:83:1: warning: label ‘ok_except1’ defined but not used [-Wunused-label] 83 | ok_except1: | ^~~~~~~~~~ layer0/Field.cpp: In function ‘CField* FieldNewFromPyList(PyMOLGlobals*, PyObject*)’: layer0/Field.cpp:179:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 179 | ok = ok && I->size() == size; | ~~~~~~~~~~^~~~~~~ In file included from /usr/include/c++/14/cassert:44, from layer0/Field.h:24, from layer0/Field.cpp:26: layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’: layer0/Field.h:114:19: required from ‘T& CField::get(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’ 114 | return *ptr(pos...); | ~~~~~~^~~~~~~~ layer0/Field.cpp:343:17: required from here 156 | #define Ffloat3(f, a, b, c) ((f)->get(a, b, c)) | ~~~~~~~~~~~~~~~^~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from layer0/Field.h:24, from layer0/Isosurf.h:24, from layer0/Tetsurf.cpp:24: layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int, int}]’: layer0/Tetsurf.cpp:802:18: required from here 37 | #define O4Ptr(field,P1,P2,P3,P4,offs) ((field)->ptr(P1+offs[0],P2+offs[1],P3+offs[2],P4)) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = PointType; SizeTs = {int, int, int, int}]’: layer0/Tetsurf.cpp:831:27: required from here 59 | #define EdgePtPtr(field,P2,P3,P4,P5) ((field)->ptr(P2,P3,P4,P5)) | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’: layer0/Field.h:114:19: required from ‘T& CField::get(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’ 114 | return *ptr(pos...); | ~~~~~~^~~~~~~~ layer0/Tetsurf.cpp:791:16: required from here 39 | #define I3(field,P1,P2,P3) ((field)->get(P1,P2,P3)) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’: layer0/Field.h:114:19: required from ‘T& CField::get(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’ 114 | return *ptr(pos...); | ~~~~~~^~~~~~~~ layer0/Tetsurf.cpp:822:18: required from here 35 | #define O3(field,P1,P2,P3,offs) ((field)->get(P1+offs[0],P2+offs[1],P3+offs[2])) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from layer0/Field.h:24, from layer0/Isosurf.h:24, from layer0/Isosurf.cpp:25: layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int, int}]’: layer0/Isosurf.cpp:552:24: required from here 158 | #define Ffloat4p(f, a, b, c, d) ((f)->ptr(a, b, c, d)) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’: layer0/Isosurf.cpp:1459:32: required from here 39 | #define O3Ptr(field,P1,P2,P3,offs) ((field)->ptr((P1)+offs[0],(P2)+offs[1],(P3)+offs[2])) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = PointType; SizeTs = {int, int, int, int}]’: layer0/Field.h:134:26: required from ‘T* CFieldTyped::ptr(SizeTs ...) [with SizeTs = {int, int, int, int}; T = PointType]’ 134 | return CField::ptr(pos...); | ~~~~~~~~~~~~~~^~~~~~~~ layer0/Isosurf.cpp:1617:19: required from here 53 | #define EdgePtPtr(field,P2,P3,P4,P5) ((field)->ptr(P2,P3,P4,P5)) | ~~~~~~~~~~~~^~~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’: layer0/Field.h:114:19: required from ‘T& CField::get(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’ 114 | return *ptr(pos...); | ~~~~~~^~~~~~~~ layer0/Field.h:144:26: required from ‘T& CFieldTyped::get(SizeTs ...) [with SizeTs = {int, int, int}; T = int]’ 144 | return CField::get(pos...); | ~~~~~~~~~~~~~~^~~~~~~~ layer0/Isosurf.cpp:1456:15: required from here 43 | #define I3(field,P1,P2,P3) ((field)->get(P1,P2,P3)) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = int; SizeTs = {int, int, int, int}]’: layer0/Field.h:114:19: required from ‘T& CField::get(SizeTs ...) [with T = int; SizeTs = {int, int, int, int}]’ 114 | return *ptr(pos...); | ~~~~~~^~~~~~~~ layer0/Field.h:144:26: required from ‘T& CFieldTyped::get(SizeTs ...) [with SizeTs = {int, int, int, int}; T = int]’ 144 | return CField::get(pos...); | ~~~~~~~~~~~~~~^~~~~~~~ layer0/Isosurf.cpp:1487:13: required from here 45 | #define I4(field,P1,P2,P3,P4) ((field)->get(P1,P2,P3,P4)) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/MemoryDebug.cpp: In function ‘void* VLADeleteRaw(void*, int, unsigned int)’: layer0/MemoryDebug.cpp:223:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare] 223 | if(index < -old_size) | ~~~~~~^~~~~~~~~~~ layer0/MemoryDebug.cpp:235:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare] 235 | (index < vla->size) && ((count + index) <= vla->size)) { | ~~~~~~^~~~~~~~~~~ layer0/MemoryDebug.cpp: In function ‘void* VLAInsertRaw(void*, int, unsigned int)’: layer0/MemoryDebug.cpp:256:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare] 256 | if(index < -old_size) | ~~~~~~^~~~~~~~~~~ layer0/MemoryDebug.cpp:263:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare] 263 | if(index > old_size) | ~~~~~~^~~~~~~~~~ layer0/MemoryDebug.cpp:266:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare] 266 | if((index >= 0) && (count > 0) && (index <= old_size)) { | ~~~~~~^~~~~~~~~~~ layer0/MemoryUsage.cpp: In function ‘size_t pymol::memory_usage()’: layer0/MemoryUsage.cpp:38:21: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=] 38 | std::fscanf(fp, "%*zu%zu", &vmRSS); | ^~~~~~~~~ layer0/MemoryUsage.cpp:38:16: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 38 | std::fscanf(fp, "%*zu%zu", &vmRSS); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ layer0/MyPNG.cpp: In function ‘int MyPNGWrite(const char*, const pymol::Image&, float, int, int, float, float, png_outbuf_t*)’: layer0/MyPNG.cpp:299:20: warning: comparison of integer expressions of different signedness: ‘png_uint_32’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 299 | for(k = 0; k < height; k++) | ~~^~~~~~~~ layer0/MyPNG.cpp:340:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 340 | for(b = 0; b < height; b++) { | ~~^~~~~~~~ layer0/MyPNG.cpp:341:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 341 | for(a = 0; a < width; a++) { | ~~^~~~~~~ In file included from include/tnt/tnt.h:49, from layer0/ccealignmodule.cpp:39: include/tnt/tnt_array2d_utils.h: In function ‘std::istream& TNT::operator>>(std::istream&, Array2D&)’: include/tnt/tnt_array2d_utils.h:62:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 62 | for (int i=0; i>(std::istream&, Array3D&)’: include/tnt/tnt_array3d_utils.h:47:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 47 | for (int i=0; i>(std::istream&, Fortran_Array2D&)’: include/tnt/tnt_fortran_array2d_utils.h:61:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 61 | for (int i=1; i<=M; i++) | ^~~ include/tnt/tnt_fortran_array2d_utils.h:67:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 67 | A = B; | ^ In file included from include/tnt/tnt.h:57: include/tnt/tnt_fortran_array3d_utils.h: In function ‘std::istream& TNT::operator>>(std::istream&, Fortran_Array3D&)’: include/tnt/tnt_fortran_array3d_utils.h:65:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 65 | for (int i=1; i<=M; i++) | ^~~ include/tnt/tnt_fortran_array3d_utils.h:70:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 70 | A = B; | ^ In file included from include/tnt/tnt.h:45: In member function ‘TNT::Array1D::set_(double*, double*, double const&)’, inlined from ‘TNT::Array1D::Array1D(int, double const&)’ at include/tnt/tnt_array1d.h:119:6, inlined from ‘findBest(cePoint*, cePoint*, afp**, int, int, int)’ at layer0/ccealignmodule.cpp:506:28: include/tnt/tnt_array1d.h:283:20: warning: ‘memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 283 | *p = a; | ~~~^~~ layer0/marching_cubes.cpp: In function ‘mc::Mesh mc::march(const Field&, float, bool)’: layer0/marching_cubes.cpp:517:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 517 | for (int z = 0; z < zDim; ++z) { | ~~^~~~~~ layer0/marching_cubes.cpp:550:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 550 | for (int z = 0; z < zEnd; ++z) { | ~~^~~~~~ layer0/marching_cubes.cpp:603:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 603 | if (z == zEnd - 1) { | ~~^~~~~~~~~~~ layer0/marching_cubes.cpp:608:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 608 | if (z == zEnd - 1) { | ~~^~~~~~~~~~~ layer0/marching_cubes.cpp: In function ‘void mc::calculateNormals(Mesh&)’: layer0/marching_cubes.cpp:681:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 681 | for (int i = 0; i < vertexCount; ++i) { | ~~^~~~~~~~~~~~~ layer0/marching_cubes.cpp:686:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 686 | for (int i = 0; i < triangleCount; ++i) { | ~~^~~~~~~~~~~~~~~ layer0/marching_cubes.cpp:720:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 720 | for (int i = 0; i < vertexCount; ++i) { | ~~^~~~~~~~~~~~~ In file included from layer1/ButMode.cpp:22: layer1/ButMode.cpp: In function ‘void ButModeFree(PyMOLGlobals*)’: layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CButMode’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}} layer1/ButMode.cpp:144:3: note: in expansion of macro ‘DeleteP’ 144 | DeleteP(G->ButMode); | ^~~~~~~ layer1/CGO.cpp: In function ‘void CheckAttributesForUsage(const CGO*, AttribDataDesc&, AttribDataDesc&, CGO*, bool&)’: layer1/CGO.cpp:10842:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 10842 | for (auto idx = 0; idx < attrIdx; ++idx){ | ~~~~^~~~~~~~~ layer1/CGO.cpp: In function ‘void PopulateOpsIntoStructuresForConversion(std::map&, std::map >&, AttribDataDesc&, AttribDataDesc&, int&, bool)’: layer1/CGO.cpp:10920:37: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 10920 | if (attrOp->incr_vertices != vertsperpickinfo){ | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ layer1/CGO.cpp: In function ‘CGO* CGOConvertToShader(const CGO*, AttribDataDesc&, AttribDataDesc&, int, GenericBuffer<34962>::buffer_layout, bool, int*, int, int)’: layer1/CGO.cpp:11222:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 11222 | for (auto idx = 0; idx < attrData.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~ layer1/CGO.cpp:11234:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 11234 | for (auto idx = 0; idx < attrData.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~ layer1/CGO.cpp:11243:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 11243 | for (int nxt = 0; nxt < attribOp->incr_vertices; ++nxt){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ layer1/Ortho.cpp:783:6: warning: ‘void OrthoKeyCmmd(PyMOLGlobals*, unsigned char)’ defined but not used [-Wunused-function] 783 | void OrthoKeyCmmd(PyMOLGlobals * G, unsigned char k) | ^~~~~~~~~~~~ In file included from /usr/include/string.h:548, from /usr/include/python3.12/Python.h:26, from layer0/os_python.h:34, from layer1/Ortho.cpp:24: In function ‘strcat’, inlined from ‘OrthoSpecial(PyMOLGlobals*, int, int, int, int)’ at layer1/Ortho.cpp:332:13: /usr/include/bits/string_fortified.h:140:33: warning: ‘__strcat_chk’ accessing 4611686018427387985 or more bytes at offsets [80, 261200] and [-4611686018427387904, 4611686018427387903] may overlap 1 byte at offset [80, 9223372036854775807] [-Wrestrict] 140 | return __builtin___strcat_chk (__dest, __src, __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘strcat’, inlined from ‘OrthoSpecial(PyMOLGlobals*, int, int, int, int)’ at layer1/Ortho.cpp:349:13: /usr/include/bits/string_fortified.h:140:33: warning: ‘__strcat_chk’ accessing 4611686018427387985 or more bytes at offsets [80, 261200] and [-4611686018427387904, 4611686018427387903] may overlap 1 byte at offset [80, 9223372036854775807] [-Wrestrict] 140 | return __builtin___strcat_chk (__dest, __src, __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer1/P.cpp: In function ‘int WrapperObjectAssignSubScript(PyObject*, PyObject*, PyObject*)’: layer1/P.cpp:825:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 825 | if (strlen(valstr) > ap->maxlen) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ layer1/P.cpp:849:18: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 849 | if (valint == -1 && PyErr_Occurred()) | ~~~~~~~^~~~~ layer1/P.cpp: In function ‘int PAutoBlock(PyMOLGlobals*)’: layer1/P.cpp:2288:27: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare] 2288 | if (SavedThread[a].id == id) { | ~~~~~~~~~~~~~~~~~~^~~~~ layer1/P.cpp: In function ‘int PIsGlutThread()’: layer1/P.cpp:2314:39: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 2314 | return (PyThread_get_thread_ident() == P_glut_thread_id); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ layer1/P.cpp: At global scope: layer1/P.cpp:2422:13: warning: ‘void PLockAPIWhileBlocked(PyMOLGlobals*)’ defined but not used [-Wunused-function] 2422 | static void PLockAPIWhileBlocked(PyMOLGlobals * G) | ^~~~~~~~~~~~~~~~~~~~ layer1/P.cpp:2411:13: warning: ‘void PUnlockAPIWhileBlocked(PyMOLGlobals*)’ defined but not used [-Wunused-function] 2411 | static void PUnlockAPIWhileBlocked(PyMOLGlobals * G) | ^~~~~~~~~~~~~~~~~~~~~~ layer1/P.cpp: In function ‘PLabelAtomAlt(PyMOLGlobals*, AtomInfoType*, char const*, char const*, int)’: layer1/P.cpp:322:12: warning: ‘strncpy’ specified bound 1024 equals destination size [-Wstringop-truncation] 322 | strncpy(label, origexpr, OrthoLineLength); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer1/PConv.cpp: In function ‘int PConvPyListToBitmask(PyObject*, int*, ov_size)’: layer1/PConv.cpp:83:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare] 83 | for(int i = 0; i < ll; i++) | ~~^~~~ layer1/PConv.cpp: In function ‘PyObject* PConvLabPosVecToPyList(const std::vector&)’: layer1/PConv.cpp:1194:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1194 | for (int a = 0; a < vec.size(); a++) { | ~~^~~~~~~~~~~~ In file included from layer1/Pop.cpp:22: layer1/Pop.cpp: In function ‘void PopFree(PyMOLGlobals*)’: layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CPop’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}} layer1/Pop.cpp:54:3: note: in expansion of macro ‘DeleteP’ 54 | DeleteP(G->Pop); | ^~~~~~~ layer1/Ray.cpp: In function ‘void RayRender(CRay*, unsigned int*, double, float, int, unsigned int*)’: layer1/Ray.cpp:6065:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6065 | if(x_stop > width) | ~~~~~~~^~~~~~~ layer1/Ray.cpp:6067:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6067 | if(y_stop > height) | ~~~~~~~^~~~~~~~ layer1/Ray.cpp:6148:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6148 | for(y = 0; y < height; y++) | ~~^~~~~~~~ layer1/Ray.cpp:6149:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6149 | for(x = 0; x < width; x++) { | ~~^~~~~~~ layer1/Ray.cpp:6160:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6160 | if(x < (width - 1)) { | ~~^~~~~~~~~~~~~ layer1/Ray.cpp:6171:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6171 | if(y < (height - 1)) { | ~~^~~~~~~~~~~~~~ layer1/Ray.cpp:6232:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6232 | for(y = 0; y < height; y++) | ~~^~~~~~~~ layer1/Ray.cpp:6233:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6233 | for(x = 0; x < width; x++) { | ~~^~~~~~~ layer1/Ray.cpp:6243:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6243 | if(x < (width - 1)) { | ~~^~~~~~~~~~~~~ layer1/Ray.cpp:6255:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6255 | if(y < (height - 1)) { | ~~^~~~~~~~~~~~~~ layer1/Ray.cpp:6306:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6306 | for(y = 0; y < height; y++){ | ~~^~~~~~~~ layer1/Ray.cpp:6326:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6326 | for(x = 0; x < width; x++) { | ~~^~~~~~~ layer1/Ray.cpp:6345:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6345 | if(x < (width - 1)) { | ~~^~~~~~~~~~~~~ layer1/Ray.cpp:6359:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6359 | if(y < (height - 1)) { | ~~^~~~~~~~~~~~~~ layer1/Ray.cpp:6373:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6373 | if(x && (y < (height - 1))) { | ~~^~~~~~~~~~~~~~ layer1/Ray.cpp:6380:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6380 | if(y && (x < (width - 1))) { | ~~^~~~~~~~~~~~~ layer1/Ray.cpp:6387:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6387 | if((y < (height - 1)) && (x < (width - 1))) { | ~~^~~~~~~~~~~~~~ layer1/Ray.cpp:6387:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6387 | if((y < (height - 1)) && (x < (width - 1))) { | ~~^~~~~~~~~~~~~ layer1/Ray.cpp:6543:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6543 | for(y = 0; y < height; y++) { | ~~^~~~~~~~ layer1/Ray.cpp:6544:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6544 | for(x = 0; x < width; x++) { | ~~^~~~~~~ layer1/Ray.cpp: In function ‘RayTraceThread(_CRayThreadInfo*)’: layer1/Ray.cpp:3606:39: warning: ‘hl’ may be used uninitialized [-Wmaybe-uninitialized] 3606 | compute_background_for_pixel(bkrd_uc, isOutsideInY, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ 3607 | bg_image_mode, bg_image_tilesize, bg_rgb, bg_image_linear, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3608 | (unsigned char*) T->bkrd_data, T->bgWidth, T->bgHeight, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3609 | x, wr, hl, hpixelx, orig_opaque_back ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer1/Ray.cpp:3269:9: note: ‘hl’ was declared here 3269 | float hl; | ^~ layer1/Ray.cpp: In function ‘RayRenderVRML2(_CRay*, int, int, char**, float, float, float, float, float)’: layer1/Ray.cpp:1535:20: warning: ‘%s’ directive writing up to 1023 bytes into a region of size between 0 and 914 [-Wformat-overflow=] 1535 | "%s" | ^~ ...... 1540 | vert2[2] - mid[2], axis[0], axis[1], axis[2], angle, geometry); | ~~~~~~~~ layer1/Ray.cpp:1530:18: note: ‘*__sprintfieee128’ output between 116 and 2993 bytes into a destination of size 1024 1530 | sprintf(buffer, | ~~~~~~~^~~~~~~~ 1531 | "Transform {\n" | ~~~~~~~~~~~~~~~ 1532 | " translation %8.6f %8.6f %8.6f\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1533 | " rotation %8.6f %8.6f %8.6f %8.6f\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1534 | " children [\n" | ~~~~~~~~~~~~~~~ 1535 | "%s" | ~~~~ 1536 | " ]\n" | ~~~~~~ 1537 | "}\n", | ~~~~~~ 1538 | vert2[0] - mid[0], | ~~~~~~~~~~~~~~~~~~ 1539 | vert2[1] - mid[1], | ~~~~~~~~~~~~~~~~~~ 1540 | vert2[2] - mid[2], axis[0], axis[1], axis[2], angle, geometry); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer1/Scene.cpp: In function ‘int SceneViewEqual(float*, float*)’: layer1/Scene.cpp:127:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const std::size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 127 | for(i = 0; i < cSceneViewSize; i++) { | ~~^~~~~~~~~~~~~~~~ layer1/Scene.cpp: In function ‘void SceneFree(PyMOLGlobals*)’: layer1/Scene.cpp:4071:3: warning: deleting object of polymorphic class type ‘CScene’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 4071 | delete G->Scene; | ^~~~~~~~~~~~~~~ layer1/Color.cpp: In function ‘ObjectGadgetRamp* ColorGetRamp(PyMOLGlobals*, int)’: layer1/Color.cpp:180:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 180 | if (index < I->Ext.size()) { | ~~~~~~^~~~~~~~~~~~~~~ layer1/Color.cpp: In function ‘int ColorExtFromPyList(PyMOLGlobals*, PyObject*, int)’: layer1/Color.cpp:501:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 501 | for (int a = 0; a < n_ext; ++a) { | ~~^~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/glm/detail/setup.hpp:3, from /usr/include/glm/detail/qualifier.hpp:3, from /usr/include/glm/detail/type_vec2.hpp:6, from /usr/include/glm/ext/vector_bool2.hpp:5, from /usr/include/glm/vec2.hpp:5, from layer0/GenericBuffer.h:12, from layer0/ShaderMgr.h:24, from layer1/Scene.h:29, from layer3/Executive.h:35, from layer1/Color.cpp:31: layer1/Color.cpp:515:18: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 515 | assert(a_new <= I->Ext.size()); | ~~~~~~^~~~~~~~~~~~~~~~ layer1/Color.cpp:518:15: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 518 | if (a_new == I->Ext.size()) { | ~~~~~~^~~~~~~~~~~~~~~~ layer1/Color.cpp: In function ‘int ColorFromPyList(PyMOLGlobals*, PyObject*, int)’: layer1/Color.cpp:569:44: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 569 | if (partial_restore && I->Color.size() > index) { | ~~~~~~~~~~~~~~~~^~~~~~~ layer1/Color.cpp:575:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 575 | if (index >= I->Color.size()) { | ~~~~~~^~~~~~~~~~~~~~~~~~ layer1/Color.cpp:576:30: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 576 | assert(I->Color.size() == index); | ~~~~~~~~~~~~~~~~^~~~~~~~ layer1/Color.cpp: In function ‘int ColorGetIndex(PyMOLGlobals*, const char*)’: layer1/Color.cpp:683:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 683 | if((i < I->Color.size()) && (i >= 0)) | ~~^~~~~~~~~~~~~~~~~ layer1/Color.cpp: In function ‘const char* ColorGetName(PyMOLGlobals*, int)’: layer1/Color.cpp:764:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 764 | if((index >= 0) && (index < I->Color.size())) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer1/Color.cpp:776:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 776 | if (a < I->Ext.size()) { | ~~^~~~~~~~~~~~~~~ layer1/Color.cpp: In function ‘int ColorGetStatus(PyMOLGlobals*, int)’: layer1/Color.cpp:792:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 792 | if((index >= 0) && (index < I->Color.size())) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer1/Color.cpp: In function ‘void ColorReset(PyMOLGlobals*)’: layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1026:3: note: in expansion of macro ‘reg_named_color’ 1026 | reg_named_color("white", 1.F, 1.F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1027:3: note: in expansion of macro ‘reg_named_color’ 1027 | reg_named_color("black", 0.F, 0.F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1028:3: note: in expansion of macro ‘reg_named_color’ 1028 | reg_named_color("blue", 0.F, 0.F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1029:3: note: in expansion of macro ‘reg_named_color’ 1029 | reg_named_color("green", 0.F, 1.F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1030:3: note: in expansion of macro ‘reg_named_color’ 1030 | reg_named_color("red", 1.F, 0.F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1031:3: note: in expansion of macro ‘reg_named_color’ 1031 | reg_named_color("cyan", 0.F, 1.F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1032:3: note: in expansion of macro ‘reg_named_color’ 1032 | reg_named_color("yellow", 1.F, 1.F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1033:3: note: in expansion of macro ‘reg_named_color’ 1033 | reg_named_color("dash", 1.F, 1.F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1034:3: note: in expansion of macro ‘reg_named_color’ 1034 | reg_named_color("magenta", 1.F, 0.F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1035:3: note: in expansion of macro ‘reg_named_color’ 1035 | reg_named_color("salmon", 1.F, 0.6F, 0.6F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1036:3: note: in expansion of macro ‘reg_named_color’ 1036 | reg_named_color("lime", 0.5F, 1.F, 0.5F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1037:3: note: in expansion of macro ‘reg_named_color’ 1037 | reg_named_color("slate", 0.5F, 0.5F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1038:3: note: in expansion of macro ‘reg_named_color’ 1038 | reg_named_color("hotpink", 1.F, 0.F, 0.5F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1039:3: note: in expansion of macro ‘reg_named_color’ 1039 | reg_named_color("orange", 1.F, 0.5F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1040:3: note: in expansion of macro ‘reg_named_color’ 1040 | reg_named_color("chartreuse", 0.5F, 1.F, 0.F); /* AKA puke green */ | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1041:3: note: in expansion of macro ‘reg_named_color’ 1041 | reg_named_color("limegreen", 0.F, 1.F, 0.5F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1042:3: note: in expansion of macro ‘reg_named_color’ 1042 | reg_named_color("purpleblue", 0.5F, 0.F, 1.F); /* legacy name */ | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1043:3: note: in expansion of macro ‘reg_named_color’ 1043 | reg_named_color("marine", 0.F, 0.5F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1044:3: note: in expansion of macro ‘reg_named_color’ 1044 | reg_named_color("olive", 0.77F, 0.7F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1045:3: note: in expansion of macro ‘reg_named_color’ 1045 | reg_named_color("purple", 0.75F, 0.F, 0.75F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1046:3: note: in expansion of macro ‘reg_named_color’ 1046 | reg_named_color("teal", 0.F, 0.75F, 0.75F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1047:3: note: in expansion of macro ‘reg_named_color’ 1047 | reg_named_color("ruby", 0.6F, 0.2F, 0.2F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1048:3: note: in expansion of macro ‘reg_named_color’ 1048 | reg_named_color("forest", 0.2F, 0.6F, 0.2F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1049:3: note: in expansion of macro ‘reg_named_color’ 1049 | reg_named_color("deepblue", 0.25F, 0.25F, 0.65F); /* was "deep" */ | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1050:3: note: in expansion of macro ‘reg_named_color’ 1050 | reg_named_color("grey", 0.5F, 0.5F, 0.5F); /* english spelling */ | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1051:3: note: in expansion of macro ‘reg_named_color’ 1051 | reg_named_color("gray", 0.5F, 0.5F, 0.5F); /* american spelling */ | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1052:3: note: in expansion of macro ‘reg_named_color’ 1052 | reg_named_color("carbon", 0.2F, 1.F, 0.2F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1053:3: note: in expansion of macro ‘reg_named_color’ 1053 | reg_named_color("nitrogen", 0.2F, 0.2F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1054:3: note: in expansion of macro ‘reg_named_color’ 1054 | reg_named_color("oxygen", 1.F, 0.3F, 0.3F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1055:3: note: in expansion of macro ‘reg_named_color’ 1055 | reg_named_color("hydrogen", 0.9F, 0.9F, 0.9F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1056:3: note: in expansion of macro ‘reg_named_color’ 1056 | reg_named_color("brightorange", 1.F, 0.7F, 0.2F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1057:3: note: in expansion of macro ‘reg_named_color’ 1057 | reg_named_color("sulfur", 0.9F, 0.775F, 0.25F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1058:3: note: in expansion of macro ‘reg_named_color’ 1058 | reg_named_color("tv_red", 1.F, 0.2F, 0.2F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1059:3: note: in expansion of macro ‘reg_named_color’ 1059 | reg_named_color("tv_green", 0.2F, 1.F, 0.2F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1060:3: note: in expansion of macro ‘reg_named_color’ 1060 | reg_named_color("tv_blue", 0.3F, 0.3F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1061:3: note: in expansion of macro ‘reg_named_color’ 1061 | reg_named_color("tv_yellow", 1.F, 1.F, 0.2F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1062:3: note: in expansion of macro ‘reg_named_color’ 1062 | reg_named_color("yelloworange", 1.F, 0.87F, 0.37F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1063:3: note: in expansion of macro ‘reg_named_color’ 1063 | reg_named_color("tv_orange", 1.F, 0.55F, 0.15F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1064:3: note: in expansion of macro ‘reg_named_color’ 1064 | reg_named_color("br0", 0.1F, 0.1F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1065:3: note: in expansion of macro ‘reg_named_color’ 1065 | reg_named_color("br1", 0.2F, 0.1F, 0.9F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1066:3: note: in expansion of macro ‘reg_named_color’ 1066 | reg_named_color("br2", 0.3F, 0.1F, 0.8F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1067:3: note: in expansion of macro ‘reg_named_color’ 1067 | reg_named_color("br3", 0.4F, 0.1F, 0.7F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1068:3: note: in expansion of macro ‘reg_named_color’ 1068 | reg_named_color("br4", 0.5F, 0.1F, 0.6F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1069:3: note: in expansion of macro ‘reg_named_color’ 1069 | reg_named_color("br5", 0.6F, 0.1F, 0.5F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1070:3: note: in expansion of macro ‘reg_named_color’ 1070 | reg_named_color("br6", 0.7F, 0.1F, 0.4F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1071:3: note: in expansion of macro ‘reg_named_color’ 1071 | reg_named_color("br7", 0.8F, 0.1F, 0.3F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1072:3: note: in expansion of macro ‘reg_named_color’ 1072 | reg_named_color("br8", 0.9F, 0.1F, 0.2F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1073:3: note: in expansion of macro ‘reg_named_color’ 1073 | reg_named_color("br9", 1.F, 0.1F, 0.1F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1074:3: note: in expansion of macro ‘reg_named_color’ 1074 | reg_named_color("pink", 1.F, 0.65F, 0.85F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1075:3: note: in expansion of macro ‘reg_named_color’ 1075 | reg_named_color("firebrick", 0.698F, 0.13F, 0.13F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1076:3: note: in expansion of macro ‘reg_named_color’ 1076 | reg_named_color("chocolate", 0.555F, 0.222F, 0.111F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1077:3: note: in expansion of macro ‘reg_named_color’ 1077 | reg_named_color("brown", 0.65F, 0.32F, 0.17F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1078:3: note: in expansion of macro ‘reg_named_color’ 1078 | reg_named_color("wheat", 0.99F, 0.82F, 0.65F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1079:3: note: in expansion of macro ‘reg_named_color’ 1079 | reg_named_color("violet", 1.F, 0.5F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1088:5: note: in expansion of macro ‘reg_named_color’ 1088 | reg_named_color(name, a / 99.F, a / 99.F, a / 99.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1091:3: note: in expansion of macro ‘reg_named_color’ 1091 | reg_named_color("lightmagenta", 1.F, 0.2F, 0.8F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1105:5: note: in expansion of macro ‘reg_named_color’ 1105 | reg_named_color(name, | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1121:5: note: in expansion of macro ‘reg_named_color’ 1121 | reg_named_color(name, | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1137:5: note: in expansion of macro ‘reg_named_color’ 1137 | reg_named_color(name, | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1155:5: note: in expansion of macro ‘reg_named_color’ 1155 | reg_named_color(name, | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1161:3: note: in expansion of macro ‘reg_named_color’ 1161 | reg_named_color("density", 0.1F, 0.1F, 0.6F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1168:5: note: in expansion of macro ‘reg_named_color’ 1168 | reg_named_color(name, a / 99.F, a / 99.F, a / 99.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1183:5: note: in expansion of macro ‘reg_named_color’ 1183 | reg_named_color(name, | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1189:3: note: in expansion of macro ‘reg_named_color’ 1189 | reg_named_color("paleyellow", 1.F, 1.F, 0.5F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1190:3: note: in expansion of macro ‘reg_named_color’ 1190 | reg_named_color("aquamarine", 0.5F, 1.F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1191:3: note: in expansion of macro ‘reg_named_color’ 1191 | reg_named_color("deepsalmon", 1.F, 0.5F, 0.5F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1192:3: note: in expansion of macro ‘reg_named_color’ 1192 | reg_named_color("palegreen", 0.65F, 0.9F, 0.65F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1193:3: note: in expansion of macro ‘reg_named_color’ 1193 | reg_named_color("deepolive", 0.6F, 0.6F, 0.1F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1194:3: note: in expansion of macro ‘reg_named_color’ 1194 | reg_named_color("deeppurple", 0.6F, 0.1F, 0.6F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1195:3: note: in expansion of macro ‘reg_named_color’ 1195 | reg_named_color("deepteal", 0.1F, 0.6F, 0.6F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1196:3: note: in expansion of macro ‘reg_named_color’ 1196 | reg_named_color("lightblue", 0.75F, 0.75F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1197:3: note: in expansion of macro ‘reg_named_color’ 1197 | reg_named_color("lightorange", 1.F, 0.8F, 0.5F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1198:3: note: in expansion of macro ‘reg_named_color’ 1198 | reg_named_color("palecyan", 0.8F, 1.F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1199:3: note: in expansion of macro ‘reg_named_color’ 1199 | reg_named_color("lightteal", 0.4F, 0.7F, 0.7F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1200:3: note: in expansion of macro ‘reg_named_color’ 1200 | reg_named_color("splitpea", 0.52F, 0.75F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1201:3: note: in expansion of macro ‘reg_named_color’ 1201 | reg_named_color("raspberry", 0.7F, 0.3F, 0.4F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1202:3: note: in expansion of macro ‘reg_named_color’ 1202 | reg_named_color("sand", 0.72F, 0.55F, 0.3F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1203:3: note: in expansion of macro ‘reg_named_color’ 1203 | reg_named_color("smudge", 0.55F, 0.7F, 0.4F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1204:3: note: in expansion of macro ‘reg_named_color’ 1204 | reg_named_color("violetpurple", 0.55F, 0.25F, 0.6F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1205:3: note: in expansion of macro ‘reg_named_color’ 1205 | reg_named_color("dirtyviolet", 0.7F, 0.5F, 0.5F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1208:3: note: in expansion of macro ‘reg_named_color’ 1208 | reg_named_color("_deepsalmon", 1.F, 0.42F, 0.42F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1210:3: note: in expansion of macro ‘reg_named_color’ 1210 | reg_named_color("lightpink", 1.F, 0.75F, 0.87F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1211:3: note: in expansion of macro ‘reg_named_color’ 1211 | reg_named_color("greencyan", 0.25F, 1.F, 0.75F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1212:3: note: in expansion of macro ‘reg_named_color’ 1212 | reg_named_color("limon", 0.75F, 1.F, 0.25F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1213:3: note: in expansion of macro ‘reg_named_color’ 1213 | reg_named_color("skyblue", 0.2F, 0.5F, 0.8F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1214:3: note: in expansion of macro ‘reg_named_color’ 1214 | reg_named_color("bluewhite", 0.85F, 0.85F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1215:3: note: in expansion of macro ‘reg_named_color’ 1215 | reg_named_color("warmpink", 0.85F, 0.2F, 0.5F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1216:3: note: in expansion of macro ‘reg_named_color’ 1216 | reg_named_color("darksalmon", 0.73F, 0.55F, 0.52F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1217:3: note: in expansion of macro ‘reg_named_color’ 1217 | reg_named_color("helium", 0.850980392F, 1.F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1218:3: note: in expansion of macro ‘reg_named_color’ 1218 | reg_named_color("lithium", 0.8F, 0.501960784F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1219:3: note: in expansion of macro ‘reg_named_color’ 1219 | reg_named_color("beryllium", 0.760784314F, 1.F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1220:3: note: in expansion of macro ‘reg_named_color’ 1220 | reg_named_color("boron", 1.F, 0.709803922F, 0.709803922F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1221:3: note: in expansion of macro ‘reg_named_color’ 1221 | reg_named_color("fluorine", 0.701960784F, 1.F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1222:3: note: in expansion of macro ‘reg_named_color’ 1222 | reg_named_color("neon", 0.701960784F, 0.890196078F, 0.960784314F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1223:3: note: in expansion of macro ‘reg_named_color’ 1223 | reg_named_color("sodium", 0.670588235F, 0.360784314F, 0.949019608F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1224:3: note: in expansion of macro ‘reg_named_color’ 1224 | reg_named_color("magnesium", 0.541176471F, 1.F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1225:3: note: in expansion of macro ‘reg_named_color’ 1225 | reg_named_color("aluminum", 0.749019608F, 0.650980392F, 0.650980392F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1226:3: note: in expansion of macro ‘reg_named_color’ 1226 | reg_named_color("silicon", 0.941176471F, 0.784313725F, 0.62745098F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1227:3: note: in expansion of macro ‘reg_named_color’ 1227 | reg_named_color("phosphorus", 1.F, 0.501960784F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1228:3: note: in expansion of macro ‘reg_named_color’ 1228 | reg_named_color("chlorine", 0.121568627F, 0.941176471F, 0.121568627F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1229:3: note: in expansion of macro ‘reg_named_color’ 1229 | reg_named_color("argon", 0.501960784F, 0.819607843F, 0.890196078F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1230:3: note: in expansion of macro ‘reg_named_color’ 1230 | reg_named_color("potassium", 0.560784314F, 0.250980392F, 0.831372549F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1231:3: note: in expansion of macro ‘reg_named_color’ 1231 | reg_named_color("calcium", 0.239215686F, 1.F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1232:3: note: in expansion of macro ‘reg_named_color’ 1232 | reg_named_color("scandium", 0.901960784F, 0.901960784F, 0.901960784F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1233:3: note: in expansion of macro ‘reg_named_color’ 1233 | reg_named_color("titanium", 0.749019608F, 0.760784314F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1234:3: note: in expansion of macro ‘reg_named_color’ 1234 | reg_named_color("vanadium", 0.650980392F, 0.650980392F, 0.670588235F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1235:3: note: in expansion of macro ‘reg_named_color’ 1235 | reg_named_color("chromium", 0.541176471F, 0.6F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1236:3: note: in expansion of macro ‘reg_named_color’ 1236 | reg_named_color("manganese", 0.611764706F, 0.478431373F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1237:3: note: in expansion of macro ‘reg_named_color’ 1237 | reg_named_color("iron", 0.878431373F, 0.4F, 0.2F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1238:3: note: in expansion of macro ‘reg_named_color’ 1238 | reg_named_color("cobalt", 0.941176471F, 0.564705882F, 0.62745098F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1239:3: note: in expansion of macro ‘reg_named_color’ 1239 | reg_named_color("nickel", 0.31372549F, 0.815686275F, 0.31372549F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1240:3: note: in expansion of macro ‘reg_named_color’ 1240 | reg_named_color("copper", 0.784313725F, 0.501960784F, 0.2F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1241:3: note: in expansion of macro ‘reg_named_color’ 1241 | reg_named_color("zinc", 0.490196078F, 0.501960784F, 0.690196078F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1242:3: note: in expansion of macro ‘reg_named_color’ 1242 | reg_named_color("gallium", 0.760784314F, 0.560784314F, 0.560784314F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1243:3: note: in expansion of macro ‘reg_named_color’ 1243 | reg_named_color("germanium", 0.4F, 0.560784314F, 0.560784314F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1244:3: note: in expansion of macro ‘reg_named_color’ 1244 | reg_named_color("arsenic", 0.741176471F, 0.501960784F, 0.890196078F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1245:3: note: in expansion of macro ‘reg_named_color’ 1245 | reg_named_color("selenium", 1.F, 0.631372549F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1246:3: note: in expansion of macro ‘reg_named_color’ 1246 | reg_named_color("bromine", 0.650980392F, 0.160784314F, 0.160784314F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1247:3: note: in expansion of macro ‘reg_named_color’ 1247 | reg_named_color("krypton", 0.360784314F, 0.721568627F, 0.819607843F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1248:3: note: in expansion of macro ‘reg_named_color’ 1248 | reg_named_color("rubidium", 0.439215686F, 0.180392157F, 0.690196078F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1249:3: note: in expansion of macro ‘reg_named_color’ 1249 | reg_named_color("strontium", 0.F, 1.F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1250:3: note: in expansion of macro ‘reg_named_color’ 1250 | reg_named_color("yttrium", 0.580392157F, 1.F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1251:3: note: in expansion of macro ‘reg_named_color’ 1251 | reg_named_color("zirconium", 0.580392157F, 0.878431373F, 0.878431373F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1252:3: note: in expansion of macro ‘reg_named_color’ 1252 | reg_named_color("niobium", 0.450980392F, 0.760784314F, 0.788235294F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1253:3: note: in expansion of macro ‘reg_named_color’ 1253 | reg_named_color("molybdenum", 0.329411765F, 0.709803922F, 0.709803922F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1254:3: note: in expansion of macro ‘reg_named_color’ 1254 | reg_named_color("technetium", 0.231372549F, 0.619607843F, 0.619607843F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1255:3: note: in expansion of macro ‘reg_named_color’ 1255 | reg_named_color("ruthenium", 0.141176471F, 0.560784314F, 0.560784314F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1256:3: note: in expansion of macro ‘reg_named_color’ 1256 | reg_named_color("rhodium", 0.039215686F, 0.490196078F, 0.549019608F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1257:3: note: in expansion of macro ‘reg_named_color’ 1257 | reg_named_color("palladium", 0.F, 0.411764706F, 0.521568627F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1258:3: note: in expansion of macro ‘reg_named_color’ 1258 | reg_named_color("silver", 0.752941176F, 0.752941176F, 0.752941176F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1259:3: note: in expansion of macro ‘reg_named_color’ 1259 | reg_named_color("cadmium", 1.F, 0.850980392F, 0.560784314F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1260:3: note: in expansion of macro ‘reg_named_color’ 1260 | reg_named_color("indium", 0.650980392F, 0.458823529F, 0.450980392F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1261:3: note: in expansion of macro ‘reg_named_color’ 1261 | reg_named_color("tin", 0.4F, 0.501960784F, 0.501960784F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1262:3: note: in expansion of macro ‘reg_named_color’ 1262 | reg_named_color("antimony", 0.619607843F, 0.388235294F, 0.709803922F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1263:3: note: in expansion of macro ‘reg_named_color’ 1263 | reg_named_color("tellurium", 0.831372549F, 0.478431373F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1264:3: note: in expansion of macro ‘reg_named_color’ 1264 | reg_named_color("iodine", 0.580392157F, 0.F, 0.580392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1265:3: note: in expansion of macro ‘reg_named_color’ 1265 | reg_named_color("xenon", 0.258823529F, 0.619607843F, 0.690196078F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1266:3: note: in expansion of macro ‘reg_named_color’ 1266 | reg_named_color("cesium", 0.341176471F, 0.090196078F, 0.560784314F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1267:3: note: in expansion of macro ‘reg_named_color’ 1267 | reg_named_color("barium", 0.F, 0.788235294F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1268:3: note: in expansion of macro ‘reg_named_color’ 1268 | reg_named_color("lanthanum", 0.439215686F, 0.831372549F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1269:3: note: in expansion of macro ‘reg_named_color’ 1269 | reg_named_color("cerium", 1.F, 1.F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1270:3: note: in expansion of macro ‘reg_named_color’ 1270 | reg_named_color("praseodymium", 0.850980392F, 1.F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1271:3: note: in expansion of macro ‘reg_named_color’ 1271 | reg_named_color("neodymium", 0.780392157F, 1.F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1272:3: note: in expansion of macro ‘reg_named_color’ 1272 | reg_named_color("promethium", 0.639215686F, 1.F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1273:3: note: in expansion of macro ‘reg_named_color’ 1273 | reg_named_color("samarium", 0.560784314F, 1.F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1274:3: note: in expansion of macro ‘reg_named_color’ 1274 | reg_named_color("europium", 0.380392157F, 1.F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1275:3: note: in expansion of macro ‘reg_named_color’ 1275 | reg_named_color("gadolinium", 0.270588235F, 1.F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1276:3: note: in expansion of macro ‘reg_named_color’ 1276 | reg_named_color("terbium", 0.188235294F, 1.F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1277:3: note: in expansion of macro ‘reg_named_color’ 1277 | reg_named_color("dysprosium", 0.121568627F, 1.F, 0.780392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1278:3: note: in expansion of macro ‘reg_named_color’ 1278 | reg_named_color("holmium", 0.F, 1.F, 0.611764706F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1279:3: note: in expansion of macro ‘reg_named_color’ 1279 | reg_named_color("erbium", 0.F, 0.901960784F, 0.458823529F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1280:3: note: in expansion of macro ‘reg_named_color’ 1280 | reg_named_color("thulium", 0.F, 0.831372549F, 0.321568627F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1281:3: note: in expansion of macro ‘reg_named_color’ 1281 | reg_named_color("ytterbium", 0.F, 0.749019608F, 0.219607843F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1282:3: note: in expansion of macro ‘reg_named_color’ 1282 | reg_named_color("lutetium", 0.F, 0.670588235F, 0.141176471F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1283:3: note: in expansion of macro ‘reg_named_color’ 1283 | reg_named_color("hafnium", 0.301960784F, 0.760784314F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1284:3: note: in expansion of macro ‘reg_named_color’ 1284 | reg_named_color("tantalum", 0.301960784F, 0.650980392F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1285:3: note: in expansion of macro ‘reg_named_color’ 1285 | reg_named_color("tungsten", 0.129411765F, 0.580392157F, 0.839215686F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1286:3: note: in expansion of macro ‘reg_named_color’ 1286 | reg_named_color("rhenium", 0.149019608F, 0.490196078F, 0.670588235F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1287:3: note: in expansion of macro ‘reg_named_color’ 1287 | reg_named_color("osmium", 0.149019608F, 0.4F, 0.588235294F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1288:3: note: in expansion of macro ‘reg_named_color’ 1288 | reg_named_color("iridium", 0.090196078F, 0.329411765F, 0.529411765F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1289:3: note: in expansion of macro ‘reg_named_color’ 1289 | reg_named_color("platinum", 0.815686275F, 0.815686275F, 0.878431373F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1290:3: note: in expansion of macro ‘reg_named_color’ 1290 | reg_named_color("gold", 1.F, 0.819607843F, 0.137254902F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1291:3: note: in expansion of macro ‘reg_named_color’ 1291 | reg_named_color("mercury", 0.721568627F, 0.721568627F, 0.815686275F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1292:3: note: in expansion of macro ‘reg_named_color’ 1292 | reg_named_color("thallium", 0.650980392F, 0.329411765F, 0.301960784F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1293:3: note: in expansion of macro ‘reg_named_color’ 1293 | reg_named_color("lead", 0.341176471F, 0.349019608F, 0.380392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1294:3: note: in expansion of macro ‘reg_named_color’ 1294 | reg_named_color("bismuth", 0.619607843F, 0.309803922F, 0.709803922F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1295:3: note: in expansion of macro ‘reg_named_color’ 1295 | reg_named_color("polonium", 0.670588235F, 0.360784314F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1296:3: note: in expansion of macro ‘reg_named_color’ 1296 | reg_named_color("astatine", 0.458823529F, 0.309803922F, 0.270588235F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1297:3: note: in expansion of macro ‘reg_named_color’ 1297 | reg_named_color("radon", 0.258823529F, 0.509803922F, 0.588235294F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1298:3: note: in expansion of macro ‘reg_named_color’ 1298 | reg_named_color("francium", 0.258823529F, 0.F, 0.4F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1299:3: note: in expansion of macro ‘reg_named_color’ 1299 | reg_named_color("radium", 0.F, 0.490196078F, 0.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1300:3: note: in expansion of macro ‘reg_named_color’ 1300 | reg_named_color("actinium", 0.439215686F, 0.670588235F, 0.980392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1301:3: note: in expansion of macro ‘reg_named_color’ 1301 | reg_named_color("thorium", 0.F, 0.729411765F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1302:3: note: in expansion of macro ‘reg_named_color’ 1302 | reg_named_color("protactinium", 0.F, 0.631372549F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1303:3: note: in expansion of macro ‘reg_named_color’ 1303 | reg_named_color("uranium", 0.F, 0.560784314F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1304:3: note: in expansion of macro ‘reg_named_color’ 1304 | reg_named_color("neptunium", 0.F, 0.501960784F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1305:3: note: in expansion of macro ‘reg_named_color’ 1305 | reg_named_color("plutonium", 0.F, 0.419607843F, 1.F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1306:3: note: in expansion of macro ‘reg_named_color’ 1306 | reg_named_color("americium", 0.329411765F, 0.360784314F, 0.949019608F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1307:3: note: in expansion of macro ‘reg_named_color’ 1307 | reg_named_color("curium", 0.470588235F, 0.360784314F, 0.890196078F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1308:3: note: in expansion of macro ‘reg_named_color’ 1308 | reg_named_color("berkelium", 0.541176471F, 0.309803922F, 0.890196078F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1309:3: note: in expansion of macro ‘reg_named_color’ 1309 | reg_named_color("californium", 0.631372549F, 0.211764706F, 0.831372549F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1310:3: note: in expansion of macro ‘reg_named_color’ 1310 | reg_named_color("einsteinium", 0.701960784F, 0.121568627F, 0.831372549F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1311:3: note: in expansion of macro ‘reg_named_color’ 1311 | reg_named_color("fermium", 0.701960784F, 0.121568627F, 0.729411765F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1312:3: note: in expansion of macro ‘reg_named_color’ 1312 | reg_named_color("mendelevium", 0.701960784F, 0.050980392F, 0.650980392F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1313:3: note: in expansion of macro ‘reg_named_color’ 1313 | reg_named_color("nobelium", 0.741176471F, 0.050980392F, 0.529411765F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1314:3: note: in expansion of macro ‘reg_named_color’ 1314 | reg_named_color("lawrencium", 0.780392157F, 0.F, 0.4F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1315:3: note: in expansion of macro ‘reg_named_color’ 1315 | reg_named_color("rutherfordium", 0.8F, 0.F, 0.349019608F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1316:3: note: in expansion of macro ‘reg_named_color’ 1316 | reg_named_color("dubnium", 0.819607843F, 0.F, 0.309803922F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1317:3: note: in expansion of macro ‘reg_named_color’ 1317 | reg_named_color("seaborgium", 0.850980392F, 0.F, 0.270588235F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1318:3: note: in expansion of macro ‘reg_named_color’ 1318 | reg_named_color("bohrium", 0.878431373F, 0.F, 0.219607843F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1319:3: note: in expansion of macro ‘reg_named_color’ 1319 | reg_named_color("hassium", 0.901960784F, 0.F, 0.180392157F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1320:3: note: in expansion of macro ‘reg_named_color’ 1320 | reg_named_color("meitnerium", 0.921568627F, 0.F, 0.149019608F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1321:3: note: in expansion of macro ‘reg_named_color’ 1321 | reg_named_color("deuterium", 0.9F, 0.9F, 0.9F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1322:3: note: in expansion of macro ‘reg_named_color’ 1322 | reg_named_color("lonepair", 0.5F, 0.5F, 0.5F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp:1023:25: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, int>::mapped_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1023 | assert(I->Idx[name] == Color.size() - 1); \ layer1/Color.cpp:1323:3: note: in expansion of macro ‘reg_named_color’ 1323 | reg_named_color("pseudoatom", 0.9F, 0.9F, 0.9F); | ^~~~~~~~~~~~~~~ layer1/Color.cpp: In function ‘void ColorUpdateFromLut(PyMOLGlobals*, int)’: layer1/Color.cpp:1695:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1695 | for(i = 0; i < I->Color.size(); i++) { | ~~^~~~~~~~~~~~~~~~~ layer1/Color.cpp:1699:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1699 | if(index < I->Color.size()) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer1/Color.cpp: In function ‘const float* ColorGet(PyMOLGlobals*, int)’: layer1/Color.cpp:1808:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1808 | if((index >= 0) && (index < I->Color.size())) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer1/Color.cpp: In function ‘const float* ColorGetRaw(PyMOLGlobals*, int)’: layer1/Color.cpp:1835:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1835 | if((index >= 0) && (index < I->Color.size())) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer1/Color.cpp: In function ‘int ColorGetEncoded(PyMOLGlobals*, int, float*)’: layer1/Color.cpp:1853:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1853 | if((index >= 0) && (index < I->Color.size())) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer1/Color.cpp: In instantiation of ‘int findByCaseInsensitiveName(PyMOLGlobals*, const Sequence&, const char*) [with Sequence = std::vector]’: layer1/Color.cpp:304:35: required from here 304 | return findByCaseInsensitiveName(G, G->Color->Ext, name); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ layer1/Color.cpp:245:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | for (int a = 0; a < seq.size(); ++a) { | ~~^~~~~~~~~~~~ layer1/Color.cpp: In instantiation of ‘int findByCaseInsensitiveName(PyMOLGlobals*, const Sequence&, const char*) [with Sequence = std::vector]’: layer1/Color.cpp:626:38: required from here 626 | color = findByCaseInsensitiveName(G, I->Color, name); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ layer1/Color.cpp:245:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | for (int a = 0; a < seq.size(); ++a) { | ~~^~~~~~~~~~~~ layer1/Color.cpp: In instantiation of ‘int findByCaseInsensitivePrefix(PyMOLGlobals*, const Sequence&, const char*, int&) [with Sequence = std::vector]’: layer1/Color.cpp:741:42: required from here 741 | int color = findByCaseInsensitivePrefix(G, I->Color, name, best); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ layer1/Color.cpp:275:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 275 | for (int a = 0; a < seq.size(); ++a) { | ~~^~~~~~~~~~~~ layer1/Color.cpp: In instantiation of ‘int findByCaseInsensitivePrefix(PyMOLGlobals*, const Sequence&, const char*, int&) [with Sequence = std::vector]’: layer1/Color.cpp:743:54: required from here 743 | int const ext_color = findByCaseInsensitivePrefix(G, I->Ext, name, best); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ layer1/Color.cpp:275:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 275 | for (int a = 0; a < seq.size(); ++a) { | ~~^~~~~~~~~~~~ layer1/SceneMouse.cpp: In function ‘void SceneClickPickBond(PyMOLGlobals*, int, int, int, const NamedPicking&)’: layer1/SceneMouse.cpp:513:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 513 | if (atIndex == LastPicked.src.index) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ layer1/SceneMouse.cpp: In function ‘SceneClickTransformObject(PyMOLGlobals*, pymol::CObject*, NamedPicking const&, int, bool)’: layer1/SceneMouse.cpp:455:32: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 237 [-Wformat-truncation=] 455 | " You clicked %s -> (%s)\n", buffer.c_str(), name ENDFB(G); | ^~ ~~~~ In file included from /usr/include/stdio.h:980, from /usr/include/c++/14/cstdio:42, from /usr/include/c++/14/ext/string_conversions.h:45, from /usr/include/c++/14/bits/basic_string.h:4154, from /usr/include/c++/14/string:54, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from include/pymol/zstring_view.h:12, from layer1/SceneMouse.h:4, from layer1/SceneMouse.cpp:1: In function ‘*__snprintfieee128’, inlined from ‘SceneClickTransformObject(PyMOLGlobals*, pymol::CObject*, NamedPicking const&, int, bool)’ at layer1/SceneMouse.cpp:454:11: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output 21 or more bytes (assuming 276) into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In function ‘SceneRenderPickingMultiPick(PyMOLGlobals*, SceneUnitContext*, Multipick*, unsigned int)’, inlined from ‘SceneRenderPicking(PyMOLGlobals*, int, int*, int, Picking*, int, int, Multipick*, SceneUnitContext*, unsigned int)’ at layer1/ScenePicking.cpp:314:32: layer1/ScenePicking.cpp:249:7: warning: ‘previous.src.index’ may be used uninitialized [-Wmaybe-uninitialized] 249 | if (pik->src.index != previous.src.index || | ^~ layer1/ScenePicking.cpp: In function ‘SceneRenderPicking(PyMOLGlobals*, int, int*, int, Picking*, int, int, Multipick*, SceneUnitContext*, unsigned int)’: layer1/ScenePicking.cpp:238:11: note: ‘previous.src.index’ was declared here 238 | Picking previous; | ^~~~~~~~ In file included from layer0/vla.h:7, from layer1/Symmetry.h:26, from layer1/PyMOLObject.h:27, from layer1/Scene.h:22, from layer1/Control.cpp:25: layer1/Control.cpp: In function ‘void ControlFree(PyMOLGlobals*)’: layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CControl’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}} layer1/Control.cpp:410:3: note: in expansion of macro ‘DeleteP’ 410 | DeleteP(G->Control); | ^~~~~~~ layer1/Extrude.cpp: In function ‘ExtrudeComputeTangents(CExtrude*)’: layer1/Extrude.cpp:741:13: warning: ‘*_62’ may be used uninitialized [-Wmaybe-uninitialized] 741 | *(v1++) = *(v++); /* first segment */ | ^~~~~~ layer1/Extrude.cpp:742:13: warning: ‘MEM[(float *)_62 + 4B]’ may be used uninitialized [-Wmaybe-uninitialized] 742 | *(v1++) = *(v++); | ^~~~~~ layer1/Extrude.cpp:743:13: warning: ‘MEM[(float *)_62 + 8B]’ may be used uninitialized [-Wmaybe-uninitialized] 743 | *(v1++) = *(v++); | ^~~~~~ layer1/Extrude.cpp: In function ‘ExtrudeCGOSurfaceTube(CExtrude const*, CGO*, cCylCap, float const*, bool, int)’: layer1/Extrude.cpp:948:31: warning: ‘start’ may be used uninitialized [-Wmaybe-uninitialized] 948 | if(color_override && (b > start) && (b < stop)) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ layer1/Extrude.cpp:875:7: note: ‘start’ was declared here 875 | int start, stop; | ^~~~~ layer1/Extrude.cpp:948:46: warning: ‘stop’ may be used uninitialized [-Wmaybe-uninitialized] 948 | if(color_override && (b > start) && (b < stop)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ layer1/Extrude.cpp:875:14: note: ‘stop’ was declared here 875 | int start, stop; | ^~~~ layer1/Seq.cpp: In function ‘int SeqFindRowCol(PyMOLGlobals*, int, int, int*, int*, int)’: layer1/Seq.cpp:61:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | if((char_num >= 0) && (char_num < row->ext_len) && (row->char2col)) { | ~~~~~~~~~^~~~~~~~~~~~~~ layer1/Seq.cpp: In member function ‘virtual void CSeq::reshape(int, int)’: layer1/Seq.cpp:114:28: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 114 | if(I->Row[a].ext_len > I->Size) layer1/Seq.cpp: In member function ‘virtual void CSeq::draw(CGO*)’: layer1/Seq.cpp:392:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare] 392 | if(max_len < row->ext_len) | ~~~~~~~~^~~~~~~~~~~~~~ In file included from layer0/vla.h:7, from layer1/Symmetry.h:26, from layer1/PyMOLObject.h:27, from layer1/Seq.h:21, from layer1/Seq.cpp:22: layer1/Seq.cpp: In function ‘void SeqFree(PyMOLGlobals*)’: layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CSeq’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}} layer1/Seq.cpp:731:3: note: in expansion of macro ‘DeleteP’ 731 | DeleteP(G->Seq); | ^~~~~~~ layer1/Seq.cpp: At global scope: layer1/Seq.cpp:717:13: warning: ‘void SeqPurgeRowVLA(PyMOLGlobals*)’ defined but not used [-Wunused-function] 717 | static void SeqPurgeRowVLA(PyMOLGlobals * G) | ^~~~~~~~~~~~~~ layer1/Wizard.cpp: In member function ‘virtual int CWizard::release(int, int, int, int)’: layer1/Wizard.cpp:571:18: warning: unused variable ‘wiz’ [-Wunused-variable] 571 | if (auto wiz = WizardGet(G)) { | ^~~ layer1/Wizard.cpp: In member function ‘virtual void CWizard::draw(CGO*)’: layer1/Wizard.cpp:727:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 727 | else | ^~~~ layer1/Wizard.cpp:729:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 729 | drawTopEdge(); | ^~~~~~~~~~~ In file included from layer1/Wizard.cpp:27: layer1/Wizard.cpp: In function ‘void WizardFree(PyMOLGlobals*)’: layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CWizard’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}} layer1/Wizard.cpp:845:3: note: in expansion of macro ‘DeleteP’ 845 | DeleteP(G->Wizard); | ^~~~~~~ layer1/Setting.cpp: In function ‘void SettingGenerateSideEffects(PyMOLGlobals*, int, const char*, int, int)’: layer1/Setting.cpp:2070:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2070 | if (SettingGetGlobal_b(G, cSetting_precomputed_lighting)) | ^~ layer1/Setting.cpp:2072:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2072 | SceneInvalidate(G); | ^~~~~~~~~~~~~~~ layer2/AtomInfo.cpp: In function ‘bool AtomResiFromResv(char*, size_t, int, char)’: layer2/AtomInfo.cpp:817:56: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 817 | return snprintf(resi, size, "%d%c", resv, inscode) < size; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ layer2/AtomInfo.cpp:818:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 818 | return snprintf(resi, size, "%d", resv) < size; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ layer2/CifMoleculeReader.cpp: In member function ‘void seqvec_t::set(int, const char*)’: layer2/CifMoleculeReader.cpp:108:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 108 | if (i > size()) | ~~^~~~~~~~ layer2/CifMoleculeReader.cpp: In member function ‘const char* seqvec_t::get(int) const’: layer2/CifMoleculeReader.cpp:114:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | if (i < 1 || i > size()) | ~~^~~~~~~~ layer2/CifMoleculeReader.cpp: In function ‘CoordSet** read_pdbx_struct_assembly(PyMOLGlobals*, const pymol::cif_data*, const AtomInfoType*, const CoordSet*, const char*)’: layer2/CifMoleculeReader.cpp:827:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 827 | while (j < c_src_len * c_it->size()) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ layer1/SymOp.cpp: In member function ‘pymol::SymOp::to_string[abi:cxx11]() const’: layer1/SymOp.cpp:37:32: warning: ‘%d’ directive output may be truncated writing between 1 and 4 bytes into a region of size between 0 and 5 [-Wformat-truncation=] 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ^~ layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132] 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ^~~~~~~~~~~ layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132] In file included from /usr/include/stdio.h:980, from /usr/include/c++/14/cstdio:42, from /usr/include/c++/14/ext/string_conversions.h:45, from /usr/include/c++/14/bits/basic_string.h:4154, from /usr/include/c++/14/string:54, from layer1/SymOp.h:9, from layer1/SymOp.cpp:7: In function ‘*__snprintfieee128’, inlined from ‘pymol::SymOp::to_string[abi:cxx11]() const’ at layer1/SymOp.cpp:37:16: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 6 and 17 bytes into a destination of size 8 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from layer2/CifMoleculeReader.cpp:31: layer2/CifBondDict.h: In member function ‘res_bond_dict_t::add_alt_name(char const*, char const*)’: layer2/CifBondDict.h:41:12: warning: ‘strncpy’ specified bound 4 equals destination size [-Wstringop-truncation] 41 | strncpy(s, name, sizeof(halfkey_t)); | ^ layer2/CifBondDict.h: In function ‘read_chem_comp_bond_dict(pymol::cif_data const*, bond_dict_t&)’: layer2/CifBondDict.h:93:12: warning: ‘strncpy’ specified bound 8 equals destination size [-Wstringop-truncation] 93 | strncpy(s, s_, sizeof(s)); | ^ layer2/CifBondDict.h: In member function ‘bond_dict_t::get(PyMOLGlobals*, char const*, bool)’: layer2/CifBondDict.h:93:12: warning: ‘strncpy’ specified bound 8 equals destination size [-Wstringop-truncation] In file included from /usr/include/c++/14/cassert:44, from layer0/Field.h:24, from layer3/Executive.h:27, from layer2/CoordSet.cpp:54: layer2/CoordSet.cpp: In member function ‘int CoordSet::atmToIdx(int) const’: layer2/CoordSet.cpp:134:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 134 | assert(atm < AtmToIdx.size()); | ~~~~^~~~~~~~~~~~~~~~~ layer2/CoordSet.cpp: In member function ‘void CoordSet::updateNonDiscreteAtmToIdx(unsigned int)’: layer2/CoordSet.cpp:140:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 140 | assert(!Obj || natom == Obj->NAtom); | ~~~~~~^~~~~~~~~~~~~ layer2/CoordSet.cpp:145:16: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘unsigned int’ [-Wsign-compare] 145 | assert(atm < natom); | ~~~~^~~~~~~ layer2/CoordSet.cpp: In member function ‘int CoordSet::extendIndices(int)’: layer2/CoordSet.cpp:1572:21: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 1572 | assert(NAtIndex <= nAtom); | ~~~~~~~~~^~~~~~~~ layer2/CoordSet.cpp:1573:18: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 1573 | if (NAtIndex < nAtom) { | ~~~~~~~~~^~~~~~~ layer2/CoordSet.cpp: In function ‘void CoordSetAtomToPDBStrVLA(PyMOLGlobals*, char**, int*, const AtomInfoType*, const float*, int, const PDBInfoRec*, const double*)’: layer2/CoordSet.cpp:1014:14: warning: ‘char* strncpy(char*, const char*, size_t)’ output truncated before terminating nul copying 6 bytes from a string of the same length [-Wstringop-truncation] 1014 | strncpy(anisoline, "ANISOU", 6); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ layer2/DistSet.cpp: In function ‘int DistSetGetLabelVertex(DistSet*, int, float*)’: layer2/DistSet.cpp:43:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | if (at >= 0 && at < I->LabCoord.size()) { | ~~~^~~~~~~~~~~~~~~~~~~~ layer2/DistSet.cpp: In member function ‘pymol::Result > DistSet::getLabelOffset(int) const’: layer2/DistSet.cpp:59:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 59 | if (atm < 0 || atm >= this->LabPos.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~ layer2/HydrogenAdder.cpp: In function ‘int ObjectMoleculeAddSeleHydrogensRefactored(ObjectMolecule*, int, int)’: layer2/HydrogenAdder.cpp:283:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘const int’ [-Wsign-compare] 283 | for (unsigned atm = 0; atm < n_atom_old; atm++) { | ~~~~^~~~~~~~~~~~ layer2/HydrogenAdder.cpp:301:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘const int’ [-Wsign-compare] 301 | for (unsigned atm = 0; atm < n_atom_old; ++atm) { | ~~~~^~~~~~~~~~~~ layer2/HydrogenAdder.cpp:349:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 349 | for (unsigned idx = 0; idx < cs->NIndex; ++idx) { | ~~~~^~~~~~~~~~~~ layer2/MmtfMoleculeReader.cpp: In function ‘ObjectMolecule* ObjectMoleculeReadMmtfStr(PyMOLGlobals*, ObjectMolecule*, const char*, int, int, int, int, int, int)’: layer2/MmtfMoleculeReader.cpp:171:18: warning: the address of ‘MMTF_container::unitCell’ will never be NULL [-Waddress] 171 | if (container->unitCell && | ~~~~~~~~~~~^~~~~~~~ In file included from layer2/MmtfMoleculeReader.cpp:14: contrib/mmtf-c/mmtf_parser.h:104:11: note: ‘MMTF_container::unitCell’ declared here 104 | float unitCell[6]; | ^~~~~~~~ layer2/MmtfMoleculeReader.cpp:223:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 223 | for (int l = 0, offset = atomIndex; l < group->bondAtomListCount / 2; ++l) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from layer0/vla.h:10, from layer1/Symmetry.h:26, from layer1/PyMOLObject.h:27, from layer2/ObjectMolecule.h:24, from layer2/MmtfMoleculeReader.cpp:9: layer2/MmtfMoleculeReader.cpp:276:34: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 276 | assert(cset->IdxToAtm.size() == cset->getNIndex()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ layer2/MmtfMoleculeReader.cpp:287:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 287 | for (int l = 0; l < container->bondAtomListCount / 2; ++l) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer2/ObjectVolume.cpp: In function ‘PyObject* ObjectVolumeAllStatesAsPyList(ObjectVolume*)’: layer2/ObjectVolume.cpp:127:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 127 | for(int a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectVolume.cpp: In function ‘int ObjectVolumeAllStatesFromPyList(ObjectVolume*, PyObject*)’: layer2/ObjectVolume.cpp:248:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 248 | for(int a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectVolume.cpp: In function ‘int ObjectVolumeInvalidateMapName(ObjectVolume*, const char*, const char*)’: layer2/ObjectVolume.cpp:313:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 313 | for(int a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectVolume.cpp: In member function ‘virtual void ObjectVolume::invalidate(cRep_t, cRepInv_t, int)’: layer2/ObjectVolume.cpp:341:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 341 | for(a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectVolume.cpp: In member function ‘virtual void ObjectVolume::update()’: layer2/ObjectVolume.cpp:402:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 402 | for(int a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectVolume.cpp:440:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | for (i = 0; i < vs->Ramp.size(); i += 5) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectVolume.cpp: In member function ‘virtual void ObjectVolume::render(RenderInfo*)’: layer2/ObjectVolume.cpp:759:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 759 | for(a = 0; a < I->State.size(); ++a) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectVolume.cpp: In function ‘ObjectVolume* ObjectVolumeFromXtalSym(PyMOLGlobals*, ObjectVolume*, ObjectMap*, CSymmetry*, int, int, float*, float*, float, int, float, float*, int)’: layer2/ObjectVolume.cpp:1131:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1131 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectVolume.cpp: In function ‘void ObjectVolumeRecomputeExtent(ObjectVolume*)’: layer2/ObjectVolume.cpp:1232:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1232 | for(int a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from layer0/Field.h:24, from layer0/Isosurf.h:24, from layer2/ObjectMap.h:25, from layer2/ObjectVolume.h:20, from layer2/ObjectVolume.cpp:29: layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = unsigned char; SizeTs = {int, int, int}]’: layer0/Field.h:114:19: required from ‘T& CField::get(SizeTs ...) [with T = unsigned char; SizeTs = {int, int, int}]’ 114 | return *ptr(pos...); | ~~~~~~^~~~~~~~ layer2/ObjectVolume.cpp:534:44: required from here 534 | vs->carvemask->get(x, y, z) = flag ? 0x0 : 0xFF; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer2/ObjectVolume.cpp: At global scope: layer2/ObjectVolume.cpp:657:15: warning: ‘size_t createPreintegrationTexture(PyMOLGlobals*, const float*, int)’ defined but not used [-Wunused-function] 657 | static size_t createPreintegrationTexture(PyMOLGlobals * G, const float *Table, const int count) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ layer2/ObjectCGO.cpp: In function ‘PyObject* ObjectCGOAllStatesAsPyList(ObjectCGO*)’: layer2/ObjectCGO.cpp:53:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 53 | for(a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectCGO.cpp: In function ‘int ObjectCGOAllStatesFromPyList(ObjectCGO*, PyObject*, int)’: layer2/ObjectCGO.cpp:104:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 104 | for(a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectCGO.cpp: In member function ‘virtual void ObjectCGO::invalidate(cRep_t, cRepInv_t, int)’: layer2/ObjectCGO.cpp:205:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 205 | if((state >= 0) && (state < I->State.size())) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectCGO.cpp: In member function ‘virtual void ObjectCGO::render(RenderInfo*)’: layer2/ObjectCGO.cpp:488:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 488 | if (!ray) | ^~ layer2/ObjectCGO.cpp:490:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 490 | ObjectCGORenderState(G, pass, ray, I, info, sobj, color, ramp, use_shader, cgo_lighting); | ^~~~~~~~~~~~~~~~~~~~ In file included from layer2/ObjectCGO.cpp:24: layer2/ObjectCGO.h: In copy constructor ‘ObjectCGOState::ObjectCGOState(const ObjectCGOState&)’: layer2/ObjectCGO.h:28:17: warning: ‘ObjectCGOState::G’ will be initialized after [-Wreorder] 28 | PyMOLGlobals* G; | ^ layer2/ObjectCGO.h:27:25: warning: ‘pymol::cache_ptr ObjectCGOState::renderCGO’ [-Wreorder] 27 | pymol::cache_ptr renderCGO; | ^~~~~~~~~ layer2/ObjectCGO.cpp:517:1: warning: when initialized here [-Wreorder] 517 | ObjectCGOState::ObjectCGOState(const ObjectCGOState& other) | ^~~~~~~~~~~~~~ layer2/ObjectCGO.h:29:58: warning: ‘ObjectCGOState::hasOpaque’ will be initialized after [-Wreorder] 29 | bool renderWithShaders, hasTransparency, cgo_lighting, hasOpaque; | ^~~~~~~~~ layer2/ObjectCGO.h:29:44: warning: ‘bool ObjectCGOState::cgo_lighting’ [-Wreorder] 29 | bool renderWithShaders, hasTransparency, cgo_lighting, hasOpaque; | ^~~~~~~~~~~~ layer2/ObjectCGO.cpp:517:1: warning: when initialized here [-Wreorder] 517 | ObjectCGOState::ObjectCGOState(const ObjectCGOState& other) | ^~~~~~~~~~~~~~ layer2/ObjectCGO.cpp: In function ‘ObjectCGO* ObjectCGOFromCGO(PyMOLGlobals*, ObjectCGO*, CGO*, int)’: layer2/ObjectCGO.cpp:602:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 602 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectCGO.cpp: In function ‘ObjectCGO* ObjectCGODefine(PyMOLGlobals*, ObjectCGO*, PyObject*, int)’: layer2/ObjectCGO.cpp:667:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 667 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectCGO.cpp: In function ‘ObjectCGO* ObjectCGOFromFloatArray(PyMOLGlobals*, ObjectCGO*, float*, int, int, int)’: layer2/ObjectCGO.cpp:725:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 725 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectVolume.cpp: In function ‘ObjectVolumeStateGetMapState(ObjectVolumeState*)’: layer2/ObjectVolume.cpp:74:33: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 74 | "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName | ^~ In file included from /usr/include/stdio.h:980, from /usr/include/python3.12/Python.h:24, from layer0/os_python.h:34, from layer2/ObjectVolume.cpp:20: In function ‘*__snprintfieee128’, inlined from ‘ObjectVolumeStateGetMapState(ObjectVolumeState*)’ at layer2/ObjectVolume.cpp:73:5: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 46 and 301 bytes into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ layer2/ObjectDist.cpp: In function ‘int ObjectDistMoveWithObject(ObjectDist*, ObjectMolecule*)’: layer2/ObjectDist.cpp:111:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 111 | for (int i=0; iDSet.size(); i++) { | ~^~~~~~~~~~~~~~~ layer2/ObjectDist.cpp: In function ‘void ObjectDistUpdateExtents(ObjectDist*)’: layer2/ObjectDist.cpp:136:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 136 | for(int a = 0; a < I->DSet.size(); a++) { | ~~^~~~~~~~~~~~~~~~ layer2/ObjectDist.cpp: In function ‘PyObject* ObjectDistDSetAsPyList(ObjectDist*)’: layer2/ObjectDist.cpp:148:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | for(int a = 0; a < I->DSet.size(); a++) { | ~~^~~~~~~~~~~~~~~~ layer2/ObjectDist.cpp: In function ‘int ObjectDistDSetFromPyList(ObjectDist*, PyObject*)’: layer2/ObjectDist.cpp:165:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 165 | for(int a = 0; a < I->DSet.size(); a++) { | ~~^~~~~~~~~~~~~~~~ layer2/ObjectDist.cpp: In member function ‘virtual void ObjectDist::update()’: layer2/ObjectDist.cpp:241:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 241 | for(int a = 0; a < I->DSet.size(); a++) | ~~^~~~~~~~~~~~~~~~ layer2/ObjectDist.cpp: In function ‘void ObjectDistInvalidateRep(ObjectDist*, cRep_t)’: layer2/ObjectDist.cpp:257:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 257 | for(a = 0; a < I->DSet.size(); a++) | ~~^~~~~~~~~~~~~~~~ layer2/RepCartoon.cpp: In function ‘Rep* RepCartoonNew(CoordSet*, int)’: layer2/RepCartoon.cpp:3731:11: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class CCInOut’; use assignment or value-initialization instead [-Wclass-memaccess] 3731 | memset(car, 0, sizeof(*car) * nAtIndex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer2/RepCartoon.cpp:44:7: note: ‘class CCInOut’ declared here 44 | class CCInOut { | ^~~~~~~ In file included from layer2/CoordSet.h:24, from layer2/RepCartoon.h:21, from layer2/RepCartoon.cpp:27: In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’, inlined from ‘SettingUniqueGetIfDefined(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39, inlined from ‘AtomSettingGetIfDefined(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33, inlined from ‘AtomSettingGetWD(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36, inlined from ‘ring_connector_visible(PyMOLGlobals*, AtomInfoType const*, AtomInfoType const*, bool)’ at layer2/RepCartoon.cpp:337:23: layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized] 436 | int i = *out; | ^~~~ In file included from layer2/ObjectMolecule.h:25, from layer2/CoordSet.h:25: layer2/AtomInfo.h: In function ‘ring_connector_visible(PyMOLGlobals*, AtomInfoType const*, AtomInfoType const*, bool)’: layer2/AtomInfo.h:505:5: note: ‘out’ was declared here 505 | V out; | ^~~ In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’, inlined from ‘SettingUniqueGetIfDefined(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39, inlined from ‘AtomSettingGetIfDefined(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33, inlined from ‘AtomSettingGetWD(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36, inlined from ‘ring_connector_visible(PyMOLGlobals*, AtomInfoType const*, AtomInfoType const*, bool)’ at layer2/RepCartoon.cpp:338:23: layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized] 436 | int i = *out; | ^~~~ layer2/AtomInfo.h: In function ‘ring_connector_visible(PyMOLGlobals*, AtomInfoType const*, AtomInfoType const*, bool)’: layer2/AtomInfo.h:505:5: note: ‘out’ was declared here 505 | V out; | ^~~ layer2/RepCartoon.cpp: In function ‘do_ring(PyMOLGlobals*, nuc_acid_data*, int, int*, ObjectMolecule*, CoordSet*, float, CGO*, int, float, int, int, int, float, float, int*, float*, float)’: layer2/RepCartoon.cpp:1007:65: warning: ‘i’ may be used uninitialized [-Wmaybe-uninitialized] 1007 | float ladder_alpha = 1.0f - AtomSettingGetWD(G, ai_i[i], cSetting_cartoon_transparency, 1.0f - alpha); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer2/RepCartoon.cpp:461:11: note: ‘i’ was declared here 461 | int i; | ^ In file included from layer1/Symmetry.h:26, from layer2/CoordSet.h:22: In member function ‘pymol::vla::operator+(int)AtomInfoType*’, inlined from ‘GenerateRepCartoonProcessCylindricalHelices(PyMOLGlobals*, ObjectMolecule*, CoordSet*, CGO*, CExtrude*, int, int*, float*, float*, float*, CCInOut const*, int*, float*, int, int, float, float)’ at layer2/RepCartoon.cpp:1739:34, inlined from ‘GenerateRepCartoonCGO(CoordSet*, ObjectMolecule*, nuc_acid_data*, short, float*, int, float*, float*, float*, CCInOut const*, int*, int*, int*, float*, float)’ at layer2/RepCartoon.cpp:2553:53: layer0/vla.h:118:60: warning: ‘atom_index2’ may be used uninitialized [-Wmaybe-uninitialized] 118 | template T* operator+(S i) { return m_vla + i; } | ^ layer2/RepCartoon.cpp: In function ‘GenerateRepCartoonCGO(CoordSet*, ObjectMolecule*, nuc_acid_data*, short, float*, int, float*, float*, float*, CCInOut const*, int*, int*, int*, float*, float)’: layer2/RepCartoon.cpp:1593:20: note: ‘atom_index2’ was declared here 1593 | int atom_index1, atom_index2, *s, | ^~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘int ObjectMapValidXtal(ObjectMap*, int)’: layer2/ObjectMap.cpp:133:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 133 | if((state >= 0) && (state < I->State.size())) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘pymol::Result<> ObjectMapTrim(ObjectMap*, int, float*, float*, int)’: layer2/ObjectMap.cpp:914:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 914 | } else if((state >= 0) && (state < I->State.size()) && (I->State[state].Active)) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘pymol::Result<> ObjectMapDouble(ObjectMap*, int)’: layer2/ObjectMap.cpp:931:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 931 | } else if((state >= 0) && (state < I->State.size()) && (I->State[state].Active)) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘pymol::Result<> ObjectMapHalve(ObjectMap*, int, int)’: layer2/ObjectMap.cpp:946:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 946 | } else if((state >= 0) && (state < I->State.size()) && (I->State[state].Active)) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘void ObjectMapRegeneratePoints(ObjectMap*)’: layer2/ObjectMap.cpp:1189:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1189 | for (i=0; iState.size();i++){ | ~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘PyObject* ObjectMapAllStatesAsPyList(ObjectMap*)’: layer2/ObjectMap.cpp:1279:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1279 | for(a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘int ObjectMapAllStatesFromPyList(ObjectMap*, PyObject*)’: layer2/ObjectMap.cpp:1437:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1437 | for(a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘int ObjectMapNewCopy(PyMOLGlobals*, const ObjectMap*, ObjectMap**, int, int)’: layer2/ObjectMap.cpp:1509:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1509 | for(state = 0; state < src->State.size(); state++) { | ~~~~~~^~~~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp:1518:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1518 | if(source_state < src->State.size()) { | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMapState* ObjectMapStatePrime(ObjectMap*, int)’: layer2/ObjectMap.cpp:1535:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1535 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectMap.cpp: In function ‘void ObjectMapUpdateExtents(ObjectMap*)’: layer2/ObjectMap.cpp:1548:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1548 | for(a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In member function ‘virtual void ObjectMap::invalidate(cRep_t, cRepInv_t, int)’: layer2/ObjectMap.cpp:1674:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1674 | for(a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘int ObjectMapCCP4StrToMap(ObjectMap*, char*, int, int, int, int)’: layer2/ObjectMap.cpp:2297:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 2297 | if(bytes < 256 * sizeof(int)) { | ~~~~~~^~~~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp:2307:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2307 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectMap.cpp: In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’: layer2/ObjectMap.cpp:2942:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2942 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectMap.cpp: In function ‘int ObjectMapXPLORStrToMap(ObjectMap*, char*, int, int)’: layer2/ObjectMap.cpp:3216:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 3216 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectMap.cpp: In function ‘int ObjectMapFLDStrToMap(ObjectMap*, char*, int, int, int)’: layer2/ObjectMap.cpp:3437:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 3437 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectMap.cpp: In function ‘int ObjectMapBRIXStrToMap(ObjectMap*, char*, int, int, int)’: layer2/ObjectMap.cpp:3766:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 3766 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectMap.cpp: In function ‘int ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int)’: layer2/ObjectMap.cpp:4172:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 4172 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadCCP4(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int, int)’: layer2/ObjectMap.cpp:4694:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 4694 | if(state < I->State.size()) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘int ObjectMapACNTStrToMap(ObjectMap*, char*, int, int, int)’: layer2/ObjectMap.cpp:5245:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 5245 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadXPLOR(PyMOLGlobals*, ObjectMap*, const char*, int, int, int)’: layer2/ObjectMap.cpp:5557:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 5557 | if(state < I->State.size()) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadChemPyBrick(PyMOLGlobals*, ObjectMap*, PyObject*, int, int, int)’: layer2/ObjectMap.cpp:5711:24: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 5711 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadChemPyMap(PyMOLGlobals*, ObjectMap*, PyObject*, int, int, int)’: layer2/ObjectMap.cpp:5809:24: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 5809 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from layer0/Field.h:24, from layer0/Isosurf.h:24, from layer2/ObjectMap.h:25, from layer2/ObjectMap.cpp:27: layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int, int}]’: layer2/ObjectMap.cpp:198:30: required from here 158 | #define Ffloat4p(f, a, b, c, d) ((f)->ptr(a, b, c, d)) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’: layer2/ObjectMap.cpp:1605:14: required from here 155 | #define Ffloat3p(f, a, b, c) ((f)->ptr(a, b, c)) | ~~~~~~~~~~~~~~~^~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’: layer0/Field.h:114:19: required from ‘T& CField::get(SizeTs ...) [with T = int; SizeTs = {int, int, int}]’ 114 | return *ptr(pos...); | ~~~~~~^~~~~~~~ layer2/ObjectMap.cpp:5967:46: required from here 5967 | int value = field->data->get(xi, yi, zi); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /usr/lib64/python3.12/site-packages/numpy/core/include/numpy/ndarrayobject.h:21, from /usr/lib64/python3.12/site-packages/numpy/core/include/numpy/arrayobject.h:5, from layer0/os_numpy.h:8, from layer2/ObjectMap.cpp:22: /usr/lib64/python3.12/site-packages/numpy/core/include/numpy/__multiarray_api.h: At global scope: /usr/lib64/python3.12/site-packages/numpy/core/include/numpy/__multiarray_api.h:1483:1: warning: ‘int _import_array()’ defined but not used [-Wunused-function] 1483 | _import_array(void) | ^~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMapDump(ObjectMap const*, char const*, int, int)’: layer2/ObjectMap.cpp:5982:24: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 239 [-Wformat-truncation=] 5982 | " ObjectMapDump: %s written to %s\n", om->Name, fname ENDFB(om->G); | ^~ In file included from /usr/include/stdio.h:980, from /usr/include/python3.12/Python.h:24, from layer0/os_python.h:34, from layer2/ObjectMap.cpp:21: In function ‘*__snprintfieee128’, inlined from ‘ObjectMapDump(ObjectMap const*, char const*, int, int)’ at layer2/ObjectMap.cpp:5981:5: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output 30 or more bytes (assuming 285) into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int) [clone .isra.0]’: layer2/ObjectMap.cpp:4290:18: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=] 4290 | " ObjectMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘*__snprintfieee128’, inlined from ‘ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int) [clone .isra.0]’ at layer2/ObjectMap.cpp:4289:3: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 14 and 1037 bytes into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int) [clone .isra.0]’: layer2/ObjectMap.cpp:4290:18: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=] 4290 | " ObjectMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘*__snprintfieee128’, inlined from ‘ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int) [clone .isra.0]’ at layer2/ObjectMap.cpp:4289:3: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 14 and 1037 bytes into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’: layer2/ObjectMap.cpp:2961:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2961 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘*__snprintfieee128’, inlined from ‘ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:2960:5, inlined from ‘ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:4803:25, inlined from ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’ at layer2/ObjectMap.cpp:4835:28: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 16 and 1039 bytes into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’: layer2/ObjectMap.cpp:2970:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2970 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘*__snprintfieee128’, inlined from ‘ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:2969:5, inlined from ‘ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:4803:25, inlined from ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’ at layer2/ObjectMap.cpp:4835:28: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 16 and 1039 bytes into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’: layer2/ObjectMap.cpp:2976:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2976 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘*__snprintfieee128’, inlined from ‘ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:2975:5, inlined from ‘ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:4803:25, inlined from ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’ at layer2/ObjectMap.cpp:4835:28: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 16 and 1039 bytes into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ layer2/ObjectMap.cpp: In function ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’: layer2/ObjectMap.cpp:3058:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 3058 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘*__snprintfieee128’, inlined from ‘ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:3057:5, inlined from ‘ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at layer2/ObjectMap.cpp:4803:25, inlined from ‘ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, char const*, int, int, int, int)’ at layer2/ObjectMap.cpp:4835:28: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 16 and 1039 bytes into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from layer0/OOMac.h:22, from layer2/RepDot.cpp:24: layer2/RepDot.cpp: In function ‘RepDotDoNew(CoordSet*, cRepDot_t, int)’: layer2/RepDot.cpp:463:46: warning: ‘vn’ may be used uninitialized [-Wmaybe-uninitialized] 463 | I->VN = ReallocForSure(I->VN, float, (vn - I->VN)); | ~~~^~~~~~~ layer2/RepDot.cpp:263:14: note: ‘vn’ was declared here 263 | float *v, *vn; | ^~ layer2/ObjectMesh.cpp: In member function ‘ObjectMesh::update()’: layer2/ObjectMesh.cpp:502:41: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 226 [-Wformat-truncation=] 502 | "ObjectMeshUpdate-Error: map '%s' has been deleted.\n", ms->MapName | ^~ In file included from layer1/Ortho.h:32, from layer1/Scene.h:23, from layer2/ObjectMesh.cpp:33: layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 50 and 305 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer2/ObjectMesh.cpp:535:40: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 232 [-Wformat-truncation=] 535 | " ObjectMesh: updating \"%s\".\n", I->Name ENDFB(G); | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 27 and 282 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer2/ObjectMesh.cpp: In function ‘ObjectMeshDump(ObjectMesh*, char const*, int, int)’: layer2/ObjectMesh.cpp:329:27: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 329 | " ObjectMeshDump: %s written to %s\n", I->Name, fname ENDFB(I->G); | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output 31 or more bytes (assuming 286) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer2/ObjectMolecule.cpp: In function ‘int ObjectMoleculeFillOpenValences(ObjectMolecule*, int)’: layer2/ObjectMolecule.cpp:3531:14: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘signed char’ [-Wsign-compare] 3531 | if((nn >= ai->valence) || (!flag)) | ~~~^~~~~~~~~~~~~~ layer2/ObjectMolecule.cpp: In function ‘pymol::Result<> ObjectMoleculeAddBondByIndices(ObjectMolecule*, unsigned int, unsigned int, int)’: layer2/ObjectMolecule.cpp:4328:12: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 4328 | if (atm1 >= I->NAtom || atm2 >= I->NAtom) { | ~~~~~^~~~~~~~~~~ layer2/ObjectMolecule.cpp:4328:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 4328 | if (atm1 >= I->NAtom || atm2 >= I->NAtom) { | ~~~~~^~~~~~~~~~~ layer2/ObjectMolecule.cpp: In member function ‘bool ObjectMolecule::atomHasAnyCoordinates(size_t) const’: layer2/ObjectMolecule.cpp:11713:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 11713 | for (size_t i = 0; i < NCSet; ++i) { | ~~^~~~~~~ In file included from /usr/include/c++/14/cassert:44, from layer0/Field.h:24, from layer0/Isosurf.h:24, from layer2/RepMesh.cpp:28: layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’: layer2/RepMesh.cpp:970:27: required from here 155 | #define Ffloat3p(f, a, b, c) ((f)->ptr(a, b, c)) | ~~~~~~~~~~~~~~~^~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /usr/include/c++/14/memory:78, from layer0/os_python.h:23, from layer2/RepMesh.cpp:17: In member function ‘std::unique_ptr >::~unique_ptr()’, inlined from ‘pymol::cache_ptr >::~cache_ptr()’ at include/pymol/memory.h:89:7, inlined from ‘Isofield::~Isofield()’ at layer0/Isosurf.h:30:8, inlined from ‘RepMeshNew(CoordSet*, int)’ at layer2/RepMesh.cpp:1053:5: /usr/include/c++/14/bits/unique_ptr.h:397:19: warning: ‘field’ may be used uninitialized [-Wmaybe-uninitialized] 397 | if (__ptr != nullptr) | ~~~~~~^~~~~~~~~~ layer2/RepMesh.cpp: In function ‘RepMeshNew(CoordSet*, int)’: layer2/RepMesh.cpp:715:13: note: ‘field’ was declared here 715 | Isofield *field; | ^~~~~ layer2/ObjectMolecule.cpp: In function ‘ObjectMoleculeMOLStr2CoordSet(PyMOLGlobals*, char const*, AtomInfoType**, char const**) [clone .constprop.0]’: layer2/ObjectMolecule.cpp:7579:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 224 [-Wformat-truncation=] 7579 | " ObjMolMOLStr2CoordSet: title '%s'\n", nameTmp ENDFB(G) | ^~ ~~~~~~~ In file included from layer1/Ortho.h:32, from layer2/ObjectMolecule.cpp:31: layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 34 and 289 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer2/ObjectMolecule.cpp:7627:16: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 1023 [-Wstringop-truncation] 7627 | strncpy(atInfo[a].elem, cc, cElemNameLen); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer2/ObjectMolecule.cpp: In function ‘ObjectMoleculeLoadRSTFile(PyMOLGlobals*, ObjectMolecule*, char const*, int, int, char)’: layer2/ObjectMolecule.cpp:1382:10: warning: ‘buffer’ may be used uninitialized [-Wmaybe-uninitialized] 1382 | mfree(buffer); layer2/ObjectMolecule.cpp:1279:9: note: ‘buffer’ was declared here 1279 | char *buffer, *p; | ^~~~~~ layer2/ObjectMolecule.cpp: In member function ‘ObjectMolecule::update()’: layer2/ObjectMolecule.cpp:10605:82: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 181 and 191 [-Wformat-truncation=] 10605 | " ObjectMolecule-DEBUG: updating representations for state %d of \"%s\".\n", | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 68 and 333 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer2/ObjectMolecule.cpp: In function ‘ObjectMoleculeMoveAtom(ObjectMolecule*, int, int, float const*, int, int)’: layer2/ObjectMolecule.cpp:10731:43: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1004 [-Wformat-overflow=] 10731 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ^~ 10732 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~ layer2/ObjectMolecule.cpp:10731:21: note: directive argument in the range [-2147483647, 2147483647] 10731 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer2/ObjectMolecule.cpp:10731:14: note: ‘*__sprintfieee128’ output between 78 and 2036 bytes into a destination of size 1024 10731 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 10732 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer2/RepRibbon.cpp: In function ‘RepRibbonNew(CoordSet*, int)’: layer2/RepRibbon.cpp:378:15: warning: ‘*_690’ may be used uninitialized [-Wmaybe-uninitialized] 378 | *(v1++) = *(v++); /* first segment */ | ^~~~~~ layer2/RepRibbon.cpp:379:15: warning: ‘MEM[(float *)_690 + 4B]’ may be used uninitialized [-Wmaybe-uninitialized] 379 | *(v1++) = *(v++); | ^~~~~~ layer2/RepRibbon.cpp:380:15: warning: ‘MEM[(float *)_690 + 8B]’ may be used uninitialized [-Wmaybe-uninitialized] 380 | *(v1++) = *(v++); | ^~~~~~ In function ‘ObjectMoleculeXYZStr2CoordSet(PyMOLGlobals*, char const*, AtomInfoType**, char const**)’, inlined from ‘ObjectMoleculeReadStr(PyMOLGlobals*, ObjectMolecule*, char const**, cLoadType_t, int, int, int, int, char*, short, _OVLexicon*)’ at layer2/ObjectMolecule.cpp:8551:43: layer2/ObjectMolecule.cpp:2898:16: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 1023 [-Wstringop-truncation] 2898 | strncpy(ai->elem, cc, cElemNameLen); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer2/ObjectMolecule2.cpp: In function ‘bool ObjectMoleculeConnect(ObjectMolecule*, int&, pymol::vla&, CoordSet*, int, int, bool)’: layer2/ObjectMolecule2.cpp:3750:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 3750 | for (unsigned i = 0; i < cs->NIndex; ++i) { | ~~^~~~~~~~~~~~ layer2/ObjectMolecule2.cpp: In lambda function: layer2/ObjectMolecule2.cpp:3779:15: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘const int’ [-Wsign-compare] 3779 | if (i <= j && !symop) | ~~^~~~ layer2/ObjectMolecule2.cpp: In function ‘bool ObjectMoleculeConnect(ObjectMolecule*, int&, pymol::vla&, CoordSet*, int, int, bool)’: layer2/ObjectMolecule2.cpp:3884:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 3884 | for (unsigned i = 0; i < cs->NIndex; ++i) { | ~~^~~~~~~~~~~~ layer2/ObjectMolecule2.cpp:3900:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 3900 | for (unsigned a = 0; a < cs->NTmpBond; ++a) { | ~~^~~~~~~~~~~~~~ layer2/ObjectMolecule2.cpp:3950:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 3950 | for (unsigned a = 0; a < cs->NTmpLinkBond; ++a) { | ~~^~~~~~~~~~~~~~~~~~ layer2/RepSurface.cpp: In function ‘void RepSurfaceSmoothEdges(RepSurface*)’: layer2/RepSurface.cpp:4403:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 4403 | for (auto j = 0; j < edges[i].size(); j += 3) { | ~~^~~~~~~~~~~~~~~~~ layer2/RepSurface.cpp:4415:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 4415 | for (auto j = 0; j < edges[i].size(); j += 3) { | ~~^~~~~~~~~~~~~~~~~ layer2/RepSurface.cpp:4426:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 4426 | for (auto i = 0; i < unique_edges.size(); i += 2) { | ~~^~~~~~~~~~~~~~~~~~~~~ layer2/ObjectMolecule2.cpp: In function ‘ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, char const*, char const*, char const*, char const*, char const*, char const*, float, int, float, float, char const*, float const*, int, int, int, int)’: layer2/ObjectMolecule2.cpp:335:27: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 335 | " ObjMol: created %s/%s/%s/%s`%d%c/%s\n", | ^~ In file included from /usr/include/stdio.h:980, from /usr/include/python3.12/Python.h:24, from layer0/os_python.h:34, from layer2/ObjectMolecule2.cpp:24: In function ‘*__snprintfieee128’, inlined from ‘ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, char const*, char const*, char const*, char const*, char const*, char const*, float, int, float, float, char const*, float const*, int, int, int, int)’ at layer2/ObjectMolecule2.cpp:334:7: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 26 and 291 bytes into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ layer2/ObjectMolecule3.cpp: In function ‘std::vector ObjectMoleculeGetMolMappingVec(const ObjectMolecule&)’: layer2/ObjectMolecule3.cpp:42:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 42 | for (size_t b = 0; b < objmol.NBond; ++b) { | ~~^~~~~~~~~~~~~~ layer2/ObjectMolecule3.cpp: In function ‘void ObjectMoleculePBCUnwrap(ObjectMolecule&, bool)’: layer2/ObjectMolecule3.cpp:151:34: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 151 | for (unsigned atm = 0; atm != objmol.NAtom; ++atm) { | ~~~~^~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp: In function ‘PyObject* ObjectSliceAllStatesAsPyList(ObjectSlice*)’: layer2/ObjectSlice.cpp:78:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 78 | for(a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp: In member function ‘virtual void ObjectSlice::invalidate(cRep_t, cRepInv_t, int)’: layer2/ObjectSlice.cpp:210:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 210 | for(a = 0; a < State.size(); a++) { | ~~^~~~~~~~~~~~~~ layer2/ObjectSlice.cpp: In member function ‘virtual void ObjectSlice::update()’: layer2/ObjectSlice.cpp:633:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 633 | for(a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp: In function ‘void ObjectSliceDrag(ObjectSlice*, int, int, float*, float*, float*)’: layer2/ObjectSlice.cpp:679:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 679 | if(state < I->State.size()) | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp: In function ‘int ObjectSliceGetVertex(ObjectSlice*, int, int, float*)’: layer2/ObjectSlice.cpp:750:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 750 | if(state < I->State.size()) | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp: In member function ‘virtual void ObjectSlice::render(RenderInfo*)’: layer2/ObjectSlice.cpp:925:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 925 | if(state < I->State.size()) | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp:967:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 967 | if(cur_state >= I->State.size()) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp:981:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 981 | if(state < I->State.size()) | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp:1226:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1226 | if(cur_state >= I->State.size()) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp: In function ‘ObjectSliceState* ObjectSliceStateGetActive(ObjectSlice*, int)’: layer2/ObjectSlice.cpp:1244:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1244 | if(state < I->State.size()) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp: In function ‘ObjectSlice* ObjectSliceFromMap(PyMOLGlobals*, ObjectSlice*, ObjectMap*, int, int)’: layer2/ObjectSlice.cpp:1285:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1285 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectSlice.cpp: In function ‘void ObjectSliceRecomputeExtent(ObjectSlice*)’: layer2/ObjectSlice.cpp:1362:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1362 | for(a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectSlice.cpp: In member function ‘ObjectSlice::update()’: layer2/ObjectSlice.cpp:639:42: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 225 [-Wformat-truncation=] 639 | "ObjectSliceUpdate-Error: map '%s' has been deleted.\n", oss->MapName | ^~ In file included from layer1/Ortho.h:32, from layer1/Scene.h:23, from layer2/ObjectSlice.cpp:34: layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 51 and 306 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer2/ObjectSlice.cpp:650:39: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 231 [-Wformat-truncation=] 650 | " ObjectSlice: updating \"%s\".\n", I->Name ENDFB(I->G); | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 28 and 283 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer2/ObjectSurface.cpp: In function ‘PyObject* ObjectSurfaceAllStatesAsPyList(ObjectSurface*)’: layer2/ObjectSurface.cpp:83:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 83 | for(int a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectSurface.cpp: In function ‘void ObjectSurfaceDump(ObjectSurface*, const char*, int, int)’: layer2/ObjectSurface.cpp:236:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 236 | if(state < I->State.size()) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer2/ObjectSurface.cpp: In member function ‘virtual void ObjectSurface::invalidate(cRep_t, cRepInv_t, int)’: layer2/ObjectSurface.cpp:281:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 281 | for(int a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectSurface.cpp: In function ‘int ObjectSurfaceInvalidateMapName(ObjectSurface*, const char*, const char*)’: layer2/ObjectSurface.cpp:311:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 311 | for(int a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectSurface.cpp: In function ‘ObjectSurface* ObjectSurfaceFromBox(PyMOLGlobals*, ObjectSurface*, ObjectMap*, int, int, float*, float*, float, cIsosurfaceMode, float, pymol::vla&&, cIsosurfaceSide, int)’: layer2/ObjectSurface.cpp:1029:22: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1029 | if(I->State.size() <= state) { | ~~~~~~~~~~~~~~~~^~~~~~~~ layer2/ObjectSurface.cpp: In function ‘int ObjectSurfaceSetLevel(ObjectSurface*, float, int, int)’: layer2/ObjectSurface.cpp:1125:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1125 | for(int a = 0; a < I->State.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer2/ObjectSurface.cpp: In function ‘ObjectSurfaceDump(ObjectSurface*, char const*, int, int)’: layer2/ObjectSurface.cpp:268:30: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 268 | " ObjectSurfaceDump: %s written to %s\n", I->Name, fname ENDFB(I->G); | ^~ In file included from layer1/Ortho.h:32, from layer1/Scene.h:23, from layer2/ObjectSurface.cpp:35: layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output 34 or more bytes (assuming 289) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer2/ObjectSurface.cpp: In member function ‘ObjectSurface::update()’: layer2/ObjectSurface.cpp:493:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 493 | " ObjectSurface: updating \"%s\".\n", I->Name ENDFB(I->G); | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 30 and 285 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ In file included from layer1/PyMOLObject.h:26, from layer2/ObjectMolecule.h:24, from layer2/SideChainHelper.h:9, from layer2/SideChainHelper.cpp:10: In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’, inlined from ‘SettingUniqueGetIfDefined(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39, inlined from ‘AtomSettingGetIfDefined(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33, inlined from ‘AtomSettingGetWD(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36, inlined from ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’ at layer2/SideChainHelper.cpp:47:26: layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized] 436 | int i = *out; | ^~~~ In file included from layer2/ObjectMolecule.h:25: layer2/AtomInfo.h: In function ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’: layer2/AtomInfo.h:505:5: note: ‘out’ was declared here 505 | V out; | ^~~ In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’, inlined from ‘SettingUniqueGetIfDefined(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39, inlined from ‘AtomSettingGetIfDefined(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33, inlined from ‘AtomSettingGetWD(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36, inlined from ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’ at layer2/SideChainHelper.cpp:49:26: layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized] 436 | int i = *out; | ^~~~ layer2/AtomInfo.h: In function ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’: layer2/AtomInfo.h:505:5: note: ‘out’ was declared here 505 | V out; | ^~~ In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’, inlined from ‘SettingUniqueGetIfDefined(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39, inlined from ‘AtomSettingGetIfDefined(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33, inlined from ‘AtomSettingGetWD(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36, inlined from ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’ at layer2/SideChainHelper.cpp:55:26: layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized] 436 | int i = *out; | ^~~~ layer2/AtomInfo.h: In function ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’: layer2/AtomInfo.h:505:5: note: ‘out’ was declared here 505 | V out; | ^~~ In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’, inlined from ‘SettingUniqueGetIfDefined(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39, inlined from ‘AtomSettingGetIfDefined(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33, inlined from ‘AtomSettingGetWD(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36, inlined from ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’ at layer2/SideChainHelper.cpp:57:26: layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized] 436 | int i = *out; | ^~~~ layer2/AtomInfo.h: In function ‘SideChainHelperMarkNonCartoonBonded(bool*, ObjectMolecule const*, CoordSet const*, bool, bool)’: layer2/AtomInfo.h:505:5: note: ‘out’ was declared here 505 | V out; | ^~~ layer3/AtomIterators.cpp: In member function ‘virtual bool SeleAtomIterator::next()’: layer3/AtomIterators.cpp:61:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | while ((++a) < I->Table.size()) { | ~~~~~~^~~~~~~~~~~~~~~~~ layer3/AtomIterators.cpp: In member function ‘virtual bool SeleCoordIterator::next()’: layer3/AtomIterators.cpp:129:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 129 | for (a++; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Editor.cpp: In function ‘pymol::Result<> EditorSelect(PyMOLGlobals*, const char*, const char*, const char*, const char*, int, int, int)’: layer3/Editor.cpp:776:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 776 | int result = false; | ^~~~~~ layer3/Editor.cpp: In function ‘EditorDefineExtraPks(PyMOLGlobals*)’: layer3/Editor.cpp:335:29: warning: ‘%s’ directive writing up to 255 bytes into a region of size 249 [-Wformat-overflow=] 335 | sprintf(buffer, "(byres %s)", name); | ^~ ~~~~ layer3/Editor.cpp:335:12: note: ‘*__sprintfieee128’ output between 9 and 264 bytes into a destination of size 256 335 | sprintf(buffer, "(byres %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Editor.cpp:337:31: warning: ‘%s’ directive writing up to 255 bytes into a region of size 247 [-Wformat-overflow=] 337 | sprintf(buffer, "(bychain %s)", name); | ^~ ~~~~ layer3/Editor.cpp:337:12: note: ‘*__sprintfieee128’ output between 11 and 266 bytes into a destination of size 256 337 | sprintf(buffer, "(bychain %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Editor.cpp:339:32: warning: ‘%s’ directive writing up to 255 bytes into a region of size 246 [-Wformat-overflow=] 339 | sprintf(buffer, "(byobject %s)", name); | ^~ ~~~~ layer3/Editor.cpp:339:12: note: ‘*__sprintfieee128’ output between 12 and 267 bytes into a destination of size 256 339 | sprintf(buffer, "(byobject %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Editor.cpp: In function ‘EditorPrepareDrag(PyMOLGlobals*, pymol::CObject*, int, int, int, int)’: layer3/Editor.cpp:1933:29: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=] 1933 | " Editor: grabbing (%s).", name ENDFB(G); | ^~ ~~~~ In file included from layer1/Ortho.h:32, from layer1/ButMode.h:20, from layer3/Editor.cpp:28: layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 22 and 277 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveIsosurfaceEtc(PyMOLGlobals*, const char*, const char*, float, const char*, float, int, float, int, int, int, int)’: layer3/Executive.cpp:986:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 986 | if(map_state >= mapObj->State.size()) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveIsomeshEtc(PyMOLGlobals*, const char*, const char*, float, const char*, float, int, float, int, int, int, float)’: layer3/Executive.cpp:1132:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1132 | if(map_state >= mapObj->State.size()) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveVolume(PyMOLGlobals*, const char*, const char*, float, const char*, float, int, float, int, int)’: layer3/Executive.cpp:1305:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1305 | if(map_state >= mapObj->State.size()) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/glm/detail/func_exponential.inl:8, from /usr/include/glm/exponential.hpp:110, from /usr/include/glm/detail/func_geometric.inl:1, from /usr/include/glm/geometric.hpp:116, from /usr/include/glm/detail/func_matrix.inl:1, from /usr/include/glm/matrix.hpp:161, from /usr/include/glm/detail/type_mat2x2.inl:1, from /usr/include/glm/detail/type_mat2x2.hpp:176, from /usr/include/glm/ext/matrix_double2x2.hpp:5, from /usr/include/glm/mat2x2.hpp:5, from /usr/include/glm/glm.hpp:120, from layer3/Executive.cpp:114: layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveSmooth(PyMOLGlobals*, const char*, int, int, int, int, int, int, float, bool)’: layer3/Executive.cpp:6095:17: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 6095 | assert(n_atom == SelectorCountAtoms(G, sele, cStateAll)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp:6155:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 6155 | for (int c = 0; c < n_atom; ++c) { | ~~^~~~~~~~ layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveMapSet(PyMOLGlobals*, const char*, int, const char*, int, int, int, int)’: layer3/Executive.cpp:6325:34: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 6325 | if(obj->State.size() > max_n_state) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ layer3/Executive.cpp:6436:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 6436 | if(src_state < obj->State.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp: In function ‘float ExecutiveRMSPairs(PyMOLGlobals*, const std::vector&, int, bool)’: layer3/Executive.cpp:11035:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 11035 | for(a = 0; a < pairs; a++) { | ~~^~~~~~~ layer3/Executive.cpp:11040:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 11040 | if(a < (pairs - 1)) | ~~^~~~~~~~~~~~~ layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveColor(PyMOLGlobals*, const char*, const char*, int, int)’: layer3/Executive.cpp:12401:7: warning: variable ‘ok’ set but not used [-Wunused-but-set-variable] 12401 | int ok = false; | ^~ layer3/Executive.cpp: In function ‘void ExecutiveSymExp(PyMOLGlobals*, const char*, const char*, const char*, float, int, int)’: layer3/Executive.cpp:14066:40: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 14066 | for (unsigned idx = 0; idx < cs->NIndex; ++idx) { | ~~~~^~~~~~~~~~~~ layer3/Executive.cpp:14093:40: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 14093 | for (unsigned atm = 0; atm < new_obj->NAtom; ++atm) { | ~~~~^~~~~~~~~~~~~~~~ In file included from layer3/Executive.cpp:51: layer3/Executive.cpp: In lambda function: layer0/ListMacros.h:100:9: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 100 | else \ | ^~~~ layer0/ListMacros.h:141:4: note: in expansion of macro ‘ListDetach’ 141 | ListDetach(List,copy,Link,ElemType); \ | ^~~~~~~~~~ layer3/Executive.cpp:14194:7: note: in expansion of macro ‘ListDelete’ 14194 | ListDelete(I->Spec, rec, next, SpecRec); /* NOTE: order N in list length! TO FIX */ | ^~~~~~~~~~ layer0/ListMacros.h:102:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 102 | (Elem)->Link = NULL; \ | ^ layer0/ListMacros.h:141:4: note: in expansion of macro ‘ListDetach’ 141 | ListDetach(List,copy,Link,ElemType); \ | ^~~~~~~~~~ layer3/Executive.cpp:14194:7: note: in expansion of macro ‘ListDelete’ 14194 | ListDelete(I->Spec, rec, next, SpecRec); /* NOTE: order N in list length! TO FIX */ | ^~~~~~~~~~ layer3/Executive.cpp: In lambda function: layer0/ListMacros.h:100:9: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 100 | else \ | ^~~~ layer0/ListMacros.h:141:4: note: in expansion of macro ‘ListDetach’ 141 | ListDetach(List,copy,Link,ElemType); \ | ^~~~~~~~~~ layer3/Executive.cpp:14206:7: note: in expansion of macro ‘ListDelete’ 14206 | ListDelete(I->Spec, rec, next, SpecRec); /* NOTE: order N in list length! TO FIX */ | ^~~~~~~~~~ layer0/ListMacros.h:102:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 102 | (Elem)->Link = NULL; \ | ^ layer0/ListMacros.h:141:4: note: in expansion of macro ‘ListDetach’ 141 | ListDetach(List,copy,Link,ElemType); \ | ^~~~~~~~~~ layer3/Executive.cpp:14206:7: note: in expansion of macro ‘ListDelete’ 14206 | ListDelete(I->Spec, rec, next, SpecRec); /* NOTE: order N in list length! TO FIX */ | ^~~~~~~~~~ layer3/Executive.cpp: In member function ‘virtual int CExecutive::click(int, int, int, int)’: layer3/Executive.cpp:14873:68: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 14873 | if(((panel->is_group) && (((xx) - 1) / DIP2PIXEL(8)) > (panel->nest_level + 1)) || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp:14874:69: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 14874 | ((!panel->is_group) && (((xx) - 1) / DIP2PIXEL(8)) > panel->nest_level)) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp: In member function ‘virtual int CExecutive::release(int, int, int, int)’: layer3/Executive.cpp:15162:65: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 15162 | (((panel->is_group) && ((xx - 1) / DIP2PIXEL(8)) > (panel->nest_level + 1)) || | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp:15163:66: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 15163 | ((!panel->is_group) && ((xx - 1) / DIP2PIXEL(8)) > panel->nest_level))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp: In member function ‘virtual int CExecutive::drag(int, int, int)’: layer3/Executive.cpp:15304:70: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 15304 | if(((panel->is_group) && ((xx - 1) / DIP2PIXEL(8)) > (panel->nest_level + 1)) || | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp:15305:71: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 15305 | ((!panel->is_group) && ((xx - 1) / DIP2PIXEL(8)) > panel->nest_level)) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp:15340:71: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 15340 | if(!((panel->is_group) && ((xx - 1) / DIP2PIXEL(8)) > (panel->nest_level + 1))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from layer0/OOMac.h:22, from layer3/Executive.cpp:37: layer3/Executive.cpp: In function ‘void ExecutiveFree(PyMOLGlobals*)’: layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CExecutive’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}} layer3/Executive.cpp:16294:3: note: in expansion of macro ‘DeleteP’ 16294 | DeleteP(G->Executive); | ^~~~~~~ layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveSliceNew(PyMOLGlobals*, const char*, const char*, int, int)’: layer3/Executive.cpp:16607:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 16607 | if(map_state >= mapObj->State.size()) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from layer3/Executive.h:38, from layer3/Executive.cpp:38: layer0/TrackerList.h: In instantiation of ‘pymol::TrackerAdapter::TrackerAdapterIterator::TrackerAdapterIterator(CTracker*, int) [with bool IsConst = false; T = SpecRec]’: layer0/TrackerList.h:99:29: required from ‘pymol::TrackerAdapter::iterator pymol::TrackerAdapter::begin() [with T = SpecRec; iterator = pymol::TrackerAdapter::TrackerAdapterIterator]’ 99 | iterator begin() { return iterator(m_tracker, m_list_id); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp:202:62: required from here 202 | for (auto& rec : ExecutiveGetSpecRecsFromPattern(G, pattern)) { | ^ layer0/TrackerList.h:80:15: warning: ‘pymol::TrackerAdapter::TrackerAdapterIterator::m_tracker’ will be initialized after [-Wreorder] 80 | CTracker* m_tracker; | ^~~~~~~~~ layer0/TrackerList.h:79:9: warning: ‘int pymol::TrackerAdapter::TrackerAdapterIterator::m_iter_id’ [-Wreorder] 79 | int m_iter_id = -1; | ^~~~~~~~~ layer0/TrackerList.h:35:14: warning: when initialized here [-Wreorder] 35 | explicit TrackerAdapterIterator(CTracker* tracker, int list_id) | ^~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp: In function ‘ExecutiveRemoveAtoms(PyMOLGlobals*, char const*, int)’: layer3/Executive.cpp:9007:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 207 and 217 [-Wformat-truncation=] 9007 | " Remove: eliminated %d atoms in model \"%s\".\n", | ^~ In file included from layer1/Ortho.h:32, from layer3/ExecutiveDef.h:3, from layer3/Executive.h:29: layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 42 and 307 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveSetBondSettingFromString(PyMOLGlobals*, int, char const*, char const*, char const*, int, int, int)’: layer3/Executive.cpp:11424:28: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11424 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~ 11425 | name, nSet, obj->Name ENDF(G); | ~~~~ layer3/Executive.cpp:11424:17: note: directive argument in the range [1, 2147483647] 11424 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 42 and 560 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveGetBondSetting(PyMOLGlobals*, int, char*, char const*, int, int, int)’: layer3/Executive.cpp:11505:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11505 | " Getting: %s for %d bonds in object \"%s\".\n", | ^~ 11506 | name, nSet, obj->Name ENDF(G); | ~~~~ layer3/Executive.cpp:11505:15: note: directive argument in the range [1, 2147483647] 11505 | " Getting: %s for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 38 and 556 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveSetBondSetting(PyMOLGlobals*, int, _object*, char const*, char const*, int, int, int)’: layer3/Executive.cpp:11605:62: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 217 [-Wformat-truncation=] 11605 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output 42 or more bytes (assuming 306) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveUnsetBondSetting(PyMOLGlobals*, int, char const*, char const*, int, int, int)’: layer3/Executive.cpp:11684:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11684 | " Setting: %s unset for %d bonds in object \"%s\".\n", | ^~ 11685 | name, nSet, rec->obj->Name ENDF(G); | ~~~~ layer3/Executive.cpp:11684:15: note: directive argument in the range [1, 2147483647] 11684 | " Setting: %s unset for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 44 and 562 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveSetObjSettingFromString(PyMOLGlobals*, int, char const*, pymol::CObject*, int, int, int)’: layer3/Executive.cpp:12226:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12226 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12227 | name, value2, obj->Name, state + 1 ENDF(G); | ~~~~ layer3/Executive.cpp:12226:19: note: directive argument in the range [1, 2147483647] 12226 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 43 and 1584 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:12218:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12218 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12219 | name, value2, obj->Name ENDF(G); | ~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 34 and 1566 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:12197:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12197 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~ ~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 21 and 1298 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveSetSettingFromString(PyMOLGlobals*, int, char const*, char const*, int, int, int)’: layer3/Executive.cpp:12129:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12129 | " Setting: %s set for %d atoms in object \"%s\".\n", | ^~ 12130 | name, op.i4, rec->obj->Name ENDF(G); | ~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 42 and 561 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:12097:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12097 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~ 12098 | name, value2, nObj, state + 1 ENDF(G); | ~~~~ layer3/Executive.cpp:12097:21: note: directive argument in the range [1, 2147483647] 12097 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp:12097:21: note: directive argument in the range [1, 2147483647] layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 43 and 1338 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:12094:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12094 | " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G); | ^~ ~~~~ layer3/Executive.cpp:12094:21: note: directive argument in the range [1, 2147483647] 12094 | " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 34 and 1320 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:12161:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12161 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12162 | name, value2, rec->obj->Name, state + 1 ENDF(G); | ~~~~ layer3/Executive.cpp:12161:25: note: directive argument in the range [1, 2147483647] 12161 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 43 and 1584 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:12153:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12153 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12154 | name, value2, rec->obj->Name ENDF(G); | ~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 34 and 1566 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:12057:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12057 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~ ~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output between 21 and 1298 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveSetSymmetry(PyMOLGlobals*, pymol::zstring_view, int, CSymmetry const&, bool)’: layer3/Executive.cpp:5951:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 202 [-Wformat-truncation=] 5951 | " %s-Details: Updated symmetry for '%s'\n", __func__, obj->Name ENDFB(G); | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 56 and 311 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:5942:46: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=] 5942 | " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__, | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 84 and 339 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveBond(PyMOLGlobals*, char const*, char const*, int, int, int, pymol::zstring_view)’: layer3/Executive.cpp:9358:53: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 214 and 224 [-Wformat-truncation=] 9358 | " Bond: %d bonds added to model \"%s\".\n", cnt, rec->obj->Name | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 35 and 300 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:9371:67: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 200 and 210 [-Wformat-truncation=] 9371 | " Valence: %d bond valences adjusted in model \"%s\".\n", cnt, | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 49 and 314 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:9383:59: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 218 [-Wformat-truncation=] 9383 | " Unbond: %d bonds removed from model \"%s\".\n", | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 41 and 306 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveSetSetting(PyMOLGlobals*, int, _object*, pymol::zstring_view, int, int, int)’: layer3/Executive.cpp:11877:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 217 [-Wformat-truncation=] 11877 | " Setting: %s set for %d atoms in object \"%s\".\n", | ^~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output 42 or more bytes (assuming 297) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:11788:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11788 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~ 11789 | name, value, nObj, state + 1 ENDF(G); | ~~~~~ layer3/Executive.cpp:11788:21: note: directive argument in the range [1, 2147483647] 11788 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp:11788:21: note: directive argument in the range [1, 2147483647] layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output 43 or more bytes (assuming 1084) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:11785:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11785 | " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G); | ^~ ~~~~~ layer3/Executive.cpp:11785:21: note: directive argument in the range [1, 2147483647] 11785 | " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output 34 or more bytes (assuming 1066) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:11909:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11909 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 11910 | name, value, rec->obj->Name, state + 1 ENDF(G); | ~~~~~ layer3/Executive.cpp:11909:25: note: directive argument in the range [1, 2147483647] 11909 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output 43 or more bytes (assuming 1330) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:11902:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11902 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 11903 | name, value, rec->obj->Name ENDF(G); | ~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output 34 or more bytes (assuming 1312) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:11744:39: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11744 | PRINTF " Setting: %s set to %s.\n", name, value ENDF(G); | ^~ ~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output 21 or more bytes (assuming 1044) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveUnsetSetting(PyMOLGlobals*, int, pymol::zstring_view, int, int, int)’: layer3/Executive.cpp:12338:68: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 215 [-Wformat-truncation=] 12338 | " Setting: %s unset for %d atoms in object \"%s\".\n", | ^~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output 44 or more bytes (assuming 299) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:12360:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=] 12360 | " Setting: %s unset in object \"%s\", state %d.\n", | ^~ layer3/Executive.cpp:12360:25: note: directive argument in the range [1, 2147483647] 12360 | " Setting: %s unset in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output 41 or more bytes (assuming 305) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:12354:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=] 12354 | " Setting: %s unset in object \"%s\".\n", | ^~ layer0/Feedback.h:282:53: note: ‘*__snprintfieee128’ output 32 or more bytes (assuming 287) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveManageObject(PyMOLGlobals*, pymol::CObject*, int, int)’: layer3/Executive.cpp:14447:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 14447 | " Executive-Warning: name \"%s\" collides with a selection language keyword.\n", | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 73 and 328 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:14442:36: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 14442 | " Executive: object name \"%s\" is illegal -- renamed to 'all_'.\n", obj->Name | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 61 and 316 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp:14473:11: warning: ‘strcpy’ offset 0 is out of the bounds [0, 0] [-Warray-bounds=] 14473 | strcpy(rec->name, obj->Name); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp: In function ‘ExecutiveCopy(PyMOLGlobals*, char const*, char const*, int)’: layer3/Executive.cpp:9665:25: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=] 9665 | " Executive: object %s created.\n", oDst->Name ENDFB(G); | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 30 and 285 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/PlugIOManager.cpp: In function ‘ObjectMap* PlugIOManagerLoadVol(PyMOLGlobals*, ObjectMap*, const char*, int, int, const char*)’: layer3/PlugIOManager.cpp:416:34: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 416 | if(obj->State.size() <= state) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from layer0/Field.h:24, from layer0/Isosurf.h:24, from layer2/ObjectMap.h:25, from layer3/PlugIOManager.h:23, from layer3/PlugIOManager.cpp:24: layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’: layer0/Field.h:114:19: required from ‘T& CField::get(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’ 114 | return *ptr(pos...); | ~~~~~~^~~~~~~~ layer3/PlugIOManager.cpp:541:21: required from here 156 | #define Ffloat3(f, a, b, c) ((f)->get(a, b, c)) | ~~~~~~~~~~~~~~~^~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer3/Executive.cpp: In function ‘ExecutiveSpectrum(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, float, float, int, int, pymol::zstring_view, int, int, int)’: layer3/Executive.cpp:4764:24: warning: ‘strncpy’ specified bound 8 equals destination size [-Wstringop-truncation] 4764 | strncpy(value_s, raw_ptr, sizeof(value_e)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer3/PlugIOManager.cpp: In function ‘PlugIOManagerLoad’: layer3/PlugIOManager.cpp:946:65: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 200 [-Wformat-truncation=] 946 | " PlugIOManagerLoad: can't load trajectory into object '%s'\n", obj->Name ENDFB(G); | ^~ In file included from /usr/include/stdio.h:980, from /usr/include/python3.12/Python.h:24, from layer0/os_python.h:34, from layer3/PlugIOManager.cpp:20: In function ‘*__snprintfieee128’, inlined from ‘PlugIOManagerLoad’ at layer3/PlugIOManager.cpp:945:7: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 58 and 313 bytes into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ layer3/Executive.cpp: In member function ‘CExecutive::drag(int, int, int)’: layer3/Executive.cpp:15471:55: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1013 [-Wformat-overflow=] 15471 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", | ^~ 15472 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~ layer3/Executive.cpp:15471:26: note: ‘*__sprintfieee128’ output between 32 and 1057 bytes into a destination of size 1024 15471 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 15472 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer3/RingFinder.cpp: In member function ‘void AbstractRingFinder::recursion(int, int)’: layer3/RingFinder.cpp:23:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 23 | } else if (depth < m_indices.size() - 1) { | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ layer3/Executive.cpp: In function ‘ExecutiveGroup(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, int, int)’: layer3/Executive.cpp:2259:40: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 2259 | " Executive: adding '%s' to group '%s'.\n", rec.name, rec.group_name | ^~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 36 and 546 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveSetName(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, bool)’: layer3/Executive.cpp:3523:41: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 222 [-Wformat-truncation=] 3523 | " Warning: Invalid characters in '%s' have been replaced or stripped\n", | ^~ 3524 | name ENDFB(G); | ~~~~ layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 67 and 322 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveSetSession(PyMOLGlobals*, _object*, int, int)’: layer3/Executive.cpp:5070:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 213 [-Wformat-truncation=] 5070 | " Executive: skipping unrecognized object \"%s\" of type %d.\n", | ^~ In function ‘ExecutiveSetNamedEntries(PyMOLGlobals*, _object*, int, int, int)’, inlined from ‘ExecutiveSetSession(PyMOLGlobals*, _object*, int, int)’ at layer3/Executive.cpp:5696:38: layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 56 and 321 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Executive.cpp: In function ‘ExecutiveSetSession(PyMOLGlobals*, _object*, int, int)’: layer3/Executive.cpp:5095:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 210 [-Wformat-truncation=] 5095 | "ExectiveSetNamedEntries-Error: after object \"%s\".\n", rec->name ENDFB(G); | ^~ In function ‘ExecutiveSetNamedEntries(PyMOLGlobals*, _object*, int, int, int)’, inlined from ‘ExecutiveSetSession(PyMOLGlobals*, _object*, int, int)’ at layer3/Executive.cpp:5696:38: layer0/Feedback.h:274:15: note: ‘*__snprintfieee128’ output between 49 and 304 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ layer3/Seeker.cpp: In function ‘void SeekerRefresh(PyMOLGlobals*, std::vector&)’: layer3/Seeker.cpp:485:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 485 | for(int b = 0; b < nRow; b++) { | ~~^~~~~~ layer3/Seeker.cpp: In function ‘void SeekerUpdate(PyMOLGlobals*)’: layer3/Seeker.cpp:1150:23: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1150 | if(row->len < min_pad) { | ~~~~~~~~~^~~~~~~~~ layer3/Seeker.cpp:1186:23: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1186 | if(row->len < min_pad) { | ~~~~~~~~~^~~~~~~~~ layer3/Seeker.cpp: In lambda function: layer3/Seeker.cpp:1248:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1248 | for(int i = 0; i < str_size; i++){ | ~~^~~~~~~~~~ layer3/Seeker.cpp: In function ‘void SeekerUpdate(PyMOLGlobals*)’: layer3/Seeker.cpp:1930:27: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1930 | if(row->ext_len < stop) | ~~~~~~~~~~~~~^~~~~~ In file included from layer0/vla.h:7, from layer1/Symmetry.h:26, from layer1/PyMOLObject.h:27, from layer1/Seq.h:21, from layer3/Seeker.cpp:26: layer3/Seeker.cpp: In function ‘void SeekerFree(PyMOLGlobals*)’: layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CSeeker’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}} layer3/Seeker.cpp:1964:3: note: in expansion of macro ‘DeleteP’ 1964 | DeleteP(G->Seeker); | ^~~~~~~ layer3/Selector.cpp: In member function ‘virtual bool SelectorAtomIterator::next()’: layer3/Selector.cpp:185:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | if ((++a) >= selector->Table.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘bool SelectorIsSelectionDiscrete(PyMOLGlobals*, SelectorID_t, bool)’: layer3/Selector.cpp:1028:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1028 | for(int a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorClassifyAtoms(PyMOLGlobals*, int, int, ObjectMolecule*)’: layer3/Selector.cpp:1082:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1082 | while(a < I->Table.size()) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:1106:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1106 | while(a1 < I->Table.size()) { | ~~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘const char* SelectorGetNameFromIndex(PyMOLGlobals*, SelectorID_t)’: layer3/Selector.cpp:1519:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1519 | for(int a = 1; a < I->Info.size(); a++) { | ~~^~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)’: layer3/Selector.cpp:1653:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1653 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:1680:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1680 | while(a1 < I->Table.size()) { | ~~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:1874:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1874 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘PyObject* SelectorColorectionGet(PyMOLGlobals*, const char*)’: layer3/Selector.cpp:2687:18: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2687 | for(b = 0; b < n_used; b++) { | ~~^~~~~~~~ layer3/Selector.cpp:2703:16: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2703 | for(a = 0; a < n_used; a++) { | ~~^~~~~~~~ layer3/Selector.cpp:2715:18: warning: comparison of integer expressions of different signedness: ‘ov_size’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2715 | for(b = 0; b < n_used; b++) { | ~~^~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorColorectionApply(PyMOLGlobals*, PyObject*, const char*)’: layer3/Selector.cpp:2763:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare] 2763 | for(b = 0; b < n_used; b++) { /* update selection indices */ | ~~^~~~~~~~ layer3/Selector.cpp:2768:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 2768 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:2772:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘ov_size’ {aka ‘long unsigned int’} [-Wsign-compare] 2772 | for(b = 0; b < n_used; b++) { | ~~^~~~~~~~ layer3/Selector.cpp: In function ‘PyObject* SelectorSecretsAsPyList(PyMOLGlobals*)’: layer3/Selector.cpp:2873:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 2873 | for(int a = 0; a < I->Info.size(); a++) { | ~~^~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘PyObject* SelectorAsPyList(PyMOLGlobals*, SelectorID_t)’: layer3/Selector.cpp:2952:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 2952 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorCountStates(PyMOLGlobals*, int)’: layer3/Selector.cpp:3446:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 3446 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorCheckIntersection(PyMOLGlobals*, int, int)’: layer3/Selector.cpp:3470:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 3470 | for(int a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorCountAtoms(PyMOLGlobals*, int, int)’: layer3/Selector.cpp:3488:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 3488 | for(int a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘void SelectorSetDeleteFlagOnSelectionInObject(PyMOLGlobals*, int, ObjectMolecule*, signed char)’: layer3/Selector.cpp:3503:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 3503 | for(int a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int* SelectorGetIndexVLAImpl(PyMOLGlobals*, CSelector*, SelectorID_t)’: layer3/Selector.cpp:3589:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 3589 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘void SelectorLogSele(PyMOLGlobals*, const char*)’: layer3/Selector.cpp:3648:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 3648 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘ObjectMolecule* SelectorGetSingleObjectMolecule(PyMOLGlobals*, SelectorID_t)’: layer3/Selector.cpp:3813:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 3813 | for (a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘ObjectMolecule* SelectorGetFirstObjectMolecule(PyMOLGlobals*, SelectorID_t)’: layer3/Selector.cpp:3843:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 3843 | for (a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘ObjectMolecule** SelectorGetObjectMoleculeVLA(PyMOLGlobals*, SelectorID_t)’: layer3/Selector.cpp:3867:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 3867 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorSubdivide(PyMOLGlobals*, const char*, SelectorID_t, SelectorID_t, SelectorID_t, SelectorID_t, const char*, const char*, int*)’: layer3/Selector.cpp:4266:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 4266 | for(a = 0; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorGetSeleNCSet(PyMOLGlobals*, SelectorID_t)’: layer3/Selector.cpp:4570:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 4570 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorGetArrayNCSet(PyMOLGlobals*, const sele_array_t&, int)’: layer3/Selector.cpp:4600:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 4600 | for(a = start; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorMapMaskVDW(PyMOLGlobals*, int, ObjectMapState*, float, int)’: layer3/Selector.cpp:4761:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 4761 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorMapGaussian(PyMOLGlobals*, int, ObjectMapState*, float, int, int, int, int, float)’: layer3/Selector.cpp:5121:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 5121 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:5165:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 5165 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorMapCoulomb(PyMOLGlobals*, int, ObjectMapState*, float, int, int, int, float)’: layer3/Selector.cpp:5373:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 5373 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorCreateObjectMolecule(PyMOLGlobals*, SelectorID_t, const char*, int, int, int, int, int, int, int)’: layer3/Selector.cpp:6062:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 6062 | if(ob) | ^~ layer3/Selector.cpp:6066:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 6066 | SelectorUpdateTable(G, source, -1); | ^~~~~~~~~~~~~~~~~~~ layer3/Selector.cpp:6077:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 6077 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In lambda function: layer3/Selector.cpp:6103:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 6103 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:6133:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 6133 | for(a = cNDummyModels; a < I->Obj.size(); a++) { /* find bonds wholly contained in the selection */ | ~~^~~~~~~~~~~~~~~ layer3/Selector.cpp:6159:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 6159 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:6200:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 6200 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:6224:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 6224 | for(a = cNDummyAtoms; a < I->Table.size(); a++) /* any selected atoms in this state? */ | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorEmbedSelection(PyMOLGlobals*, const int*, pymol::zstring_view, ObjectMolecule*, int, int)’: layer3/Selector.cpp:6660:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 6660 | for(a = start; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘sele_array_t SelectorSelectFromTagDict(PyMOLGlobals*, const std::unordered_map&)’: layer3/Selector.cpp:6755:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 6755 | for(int a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from layer0/Field.h:24, from layer0/Isosurf.h:24, from layer2/ObjectMap.h:25, from layer3/Selector.h:27, from layer3/Selector.cpp:39: layer3/Selector.cpp: In function ‘void SelectorUpdateTableSingleObject(PyMOLGlobals*, ObjectMolecule*, int, bool)’: layer3/Selector.cpp:6997:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 6997 | assert(c == I->Table.size()); | ~~^~~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘sele_array_t SelectorGetSeleArrayForAtomIndices(CSelector*, ObjectMolecule*, const int*, int, bool)’: layer3/Selector.cpp:7010:26: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 7010 | assert(I->Table.size() == cNDummyAtoms + obj->NAtom); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorModulate1(PyMOLGlobals*, EvalElem*, int)’: layer3/Selector.cpp:7293:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7293 | for (a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7316:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7316 | for(a = 0; ok && a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7379:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7379 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7393:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7393 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7416:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7416 | for(a = 0; ok && a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7457:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7457 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorSelect0(PyMOLGlobals*, EvalElem*)’: layer3/Selector.cpp:7490:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7490 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7501:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7501 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7506:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7506 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7513:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7513 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7517:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7517 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7521:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7521 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7525:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7525 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7529:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7529 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7538:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7538 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7555:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7555 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7560:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7560 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7565:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7565 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7570:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7570 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7575:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7575 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7580:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7580 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7585:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7585 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7589:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7589 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7593:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7593 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7598:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7598 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7603:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7603 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7610:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7610 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7626:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7626 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7632:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7632 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7641:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7641 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7653:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7653 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:7673:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 7673 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘pymol::Result<> SelectorSelect1(PyMOLGlobals*, EvalElem*, int)’: layer3/Selector.cpp:8378:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8378 | for(a = cNDummyModels; a < I->Obj.size(); a++) | ~~^~~~~~~~~~~~~~~ layer3/Selector.cpp:8388:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8388 | else if(model > I->Obj.size()) | ~~~~~~^~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorSelect2(PyMOLGlobals*, EvalElem*, int)’: layer3/Selector.cpp:8470:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8470 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8474:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8474 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8522:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8522 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8533:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8533 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8544:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8544 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8555:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8555 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8570:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8570 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8581:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8581 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8592:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8592 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8603:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8603 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8618:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8618 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8629:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8629 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8640:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8640 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:8651:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 8651 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorLogic1(PyMOLGlobals*, EvalElem*, int)’: layer3/Selector.cpp:9128:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 9128 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:9157:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 9157 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘int SelectorOperator22(PyMOLGlobals*, EvalElem*, int)’: layer3/Selector.cpp:9416:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 9416 | for(a = 0; a < table_size; a++) { | ~~^~~~~~~~~~~~ layer3/Selector.cpp:9438:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 9438 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:9468:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 9468 | for(a = 0; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:9473:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 9473 | for(a = cNDummyAtoms; a < I->Table.size(); a++) | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘pymol::Result > > SelectorEvaluate(PyMOLGlobals*, std::vector >&, int, int)’: layer3/Selector.cpp:9622:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 9622 | while(ok && c < word.size()) { | ~~^~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘DistSet* SelectorGetDistSet(PyMOLGlobals*, DistSet*, int, int, int, int, int, float, float*)’: layer3/Selector.cpp:10213:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 10213 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘DistSet* SelectorGetAngleSet(PyMOLGlobals*, DistSet*, int, int, int, int, int, int, int, float*, int*)’: layer3/Selector.cpp:10495:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 10495 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:10519:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 10519 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp: In function ‘DistSet* SelectorGetDihedralSet(PyMOLGlobals*, DistSet*, int, int, int, int, int, int, int, int, int, float*, int*)’: layer3/Selector.cpp:10724:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 10724 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer3/Selector.cpp:10801:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 10801 | for(a = cNDummyAtoms; a < I->Table.size(); a++) { | ~~^~~~~~~~~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int, int}]’: layer3/Selector.cpp:4800:18: required from here 158 | #define Ffloat4p(f, a, b, c, d) ((f)->ptr(a, b, c, d)) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer0/Field.h: In instantiation of ‘T* CField::ptr(SizeTs ...) [with T = float; SizeTs = {int, int, int}]’: layer3/Selector.cpp:5309:20: required from here 155 | #define Ffloat3p(f, a, b, c) ((f)->ptr(a, b, c)) | ~~~~~~~~~~~~~~~^~~~~~~~~ layer0/Field.h:100:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 100 | assert(sizeof...(pos) <= n_dim()); | ~~~~~~~~~~~~~~~^~~~~~~~~~ layer3/ExecutivePython.cpp: In function ‘pymol::Result<> ExecutiveSetRawAlignment(PyMOLGlobals*, pymol::zstring_view, PyObject*, pymol::zstring_view, int, int)’: layer3/ExecutivePython.cpp:171:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 171 | for(size_t c = 0; c < n_cols; ++c) { | ~~^~~~~~~~ layer3/ExecutivePython.cpp:180:25: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 180 | for(size_t i = 0; i < n_idx; ++i) { | ~~^~~~~~~ In file included from layer2/AtomInfo.h:23, from layer3/MaeExportHelpers.h:11, from layer3/MaeExportHelpers.cpp:11: In function ‘SettingUniqueGetTypedValuePtr(PyMOLGlobals*, int, int, int, bool*)’, inlined from ‘SettingUniqueGetIfDefined(PyMOLGlobals*, int, int, bool*)bool’ at layer1/Setting.h:447:39, inlined from ‘AtomSettingGetIfDefined(PyMOLGlobals*, AtomInfoType const*, int, bool*)bool’ at layer2/AtomInfo.h:496:33, inlined from ‘AtomSettingGetWD(PyMOLGlobals*, AtomInfoType const*, int, bool)bool’ at layer2/AtomInfo.h:506:36, inlined from ‘SettingGet(PyMOLGlobals*, SeleCoordIterator const&, int)bool’ at layer3/MaeExportHelpers.cpp:24:26, inlined from ‘MaeExportGetAtomStyle(PyMOLGlobals*, SeleCoordIterator const&)’ at layer3/MaeExportHelpers.cpp:73:26: layer1/Setting.h:436:11: warning: ‘out’ may be used uninitialized [-Wmaybe-uninitialized] 436 | int i = *out; | ^~~~ layer2/AtomInfo.h: In function ‘MaeExportGetAtomStyle(PyMOLGlobals*, SeleCoordIterator const&)’: layer2/AtomInfo.h:505:5: note: ‘out’ was declared here 505 | V out; | ^~~ layer3/Selector.cpp: In function ‘SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)’: layer3/Selector.cpp:1722:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 207 [-Wformat-truncation=] 1722 | " AssignSS-Warning: Ignoring incomplete residue /%s/%s/%s/%d%c ...\n", | ^~ In file included from /usr/include/stdio.h:980, from /usr/include/c++/14/cstdio:42, from /usr/include/c++/14/ext/string_conversions.h:45, from /usr/include/c++/14/bits/basic_string.h:4154, from /usr/include/c++/14/string:54, from layer3/Selector.cpp:20: In function ‘*__snprintfieee128’, inlined from ‘SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)’ at layer3/Selector.cpp:1721:19: /usr/include/bits/stdio2.h:68:35: note: ‘__snprintf_chkieee128’ output between 59 and 324 bytes into a destination of size 255 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ layer4/Cmd.cpp: In function ‘PyObject* CmdPushUndo(PyObject*, PyObject*)’: layer4/Cmd.cpp:2216:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2216 | if(ok) | ^~ layer4/Cmd.cpp:2218:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2218 | if(s0[0]) | ^~ layer4/Cmd.cpp: In function ‘PyObject* CmdGetMinMax(PyObject*, PyObject*)’: layer4/Cmd.cpp:4469:7: warning: variable ‘ok’ set but not used [-Wunused-but-set-variable] 4469 | int ok = false; | ^~ In file included from layer4/Cmd.cpp:77: layer1/PConv.h: In instantiation of ‘PyObject* PConvToPyObject(const std::array<_Tp, _Nm>&) [with T = float; long unsigned int N = 3; PyObject = _object]’: layer4/Cmd.cpp:380:27: required from ‘PyObject* APIResult(PyMOLGlobals*, pymol::Result&) [with T = std::array; PyObject = _object]’ 380 | return PConvToPyObject(res.result()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ layer4/Cmd.cpp:4034:19: required from here 4034 | return APIResult(G, result); | ~~~~~~~~~^~~~~~~~~~~ layer1/PConv.h:259:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 259 | for (int i = 0; i < N; ++i) { | ~~^~~ In file included from layer0/OOMac.h:22, from layer4/PopUp.cpp:23: layer4/PopUp.cpp: In function ‘void PopUpFree(Block*)’: layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CPopUp’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}} layer4/PopUp.cpp:401:3: note: in expansion of macro ‘DeleteP’ 401 | DeleteP(I); | ^~~~~~~ layer5/PyMOL.cpp: In function ‘PyMOLreturn_status Loader(CPyMOL*, const char*, const char*, int, const char*, const char*, int, int, int, int, int, int)’: layer5/PyMOL.cpp:1546:27: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare] 1546 | if((stop - start) >= sizeof(WordType)) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ In file included from layer5/PyMOL.cpp:23: layer5/PyMOL.cpp: In function ‘void PyMOL_Stop(CPyMOL*)’: layer0/MemoryDebug.h:86:32: warning: deleting object of polymorphic class type ‘CMovie’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 86 | #define DeleteP(ptr) {if(ptr) {delete ptr;ptr=NULL;}} layer5/PyMOL.cpp:1987:3: note: in expansion of macro ‘DeleteP’ 1987 | DeleteP(G->Movie); | ^~~~~~~ ov/src/OVContext.cpp: In function ‘void OVContext_Del(OVContext*)’: ov/src/OVContext.cpp:21:13: warning: variable ‘heap’ set but not used [-Wunused-but-set-variable] 21 | OVHeap *heap = I->heap; | ^~~~ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:62:16: warning: type ‘struct parm’ violates the C++ One Definition Rule [-Wodr] 62 | typedef struct parm { | ^ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:59:16: note: a different type is defined in another translation unit 59 | typedef struct parm { | ^ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:63:8: note: the first difference of corresponding definitions is field ‘title’ 63 | char title[85]; | ^ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:60:17: note: a field with different name is defined in another translation unit 60 | char ititl[81]; | ^ contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:33:3: warning: type ‘struct parmdata’ violates the C++ One Definition Rule [-Wodr] 33 | } parmdata; | ^ contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp:32:3: note: a different type is defined in another translation unit 32 | } parmdata; | ^ contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:28:15: note: the first difference of corresponding definitions is field ‘prm’ 28 | parmstruct *prm; | ^ contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp:28:13: note: a field with different name is defined in another translation unit 28 | ReadPARM *rp; | ^ layer0/Isosurf.cpp:47:16: warning: type ‘struct PointType’ violates the C++ One Definition Rule [-Wodr] 47 | typedef struct PointType { | ^ layer0/Tetsurf.cpp:46:3: note: a different type is defined in another translation unit 46 | } PointType; | ^ layer0/Isosurf.cpp:49:7: note: the first difference of corresponding definitions is field ‘NLink’ 49 | int NLink; | ^ layer0/Tetsurf.cpp:43:9: note: a field with different name is defined in another translation unit 43 | float Normal[3]; | ^ ov/src/OVOneToAny.cpp:15:3: warning: type ‘struct up_element’ violates the C++ One Definition Rule [-Wodr] 15 | } up_element; | ^ ov/src/OVOneToOne.cpp:15:3: note: a different type is defined in another translation unit 15 | } up_element; | ^ ov/src/OVOneToOne.cpp:14:25: note: the first difference of corresponding definitions is field ‘reverse_next’ 14 | ov_size forward_next, reverse_next; | ^ ov/src/OVOneToOne.cpp:15:3: note: a type with different number of fields is defined in another translation unit 15 | } up_element; | ^ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘recreate_command_line’: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1334 | line[0] = '\0'; | ^ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by ‘malloc’ 1333 | line = (char *) malloc (sizeof(char) * len); | ^ layer3/Executive.cpp: In function ‘ExecutiveManageObject’: layer3/Executive.cpp:14473:11: warning: ‘strcpy’ writing between 1 and 256 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 14473 | strcpy(rec->name, obj->Name); | ^ lto1: note: destination object is likely at address zero contrib/champ/os_memory.c: In function ‘OSMemoryZero’: contrib/champ/os_memory.c:55:18: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 55 | while(count&&(((int)p)&mask)) { | ^ contrib/champ/os_memory.c: In function ‘OSMemoryHashAdd’: contrib/champ/os_memory.c:137:8: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 137 | hash=(int)rec; | ^ contrib/champ/os_memory.c: In function ‘OSMemoryHashRemove’: contrib/champ/os_memory.c:150:8: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 150 | hash=(int)rec; | ^ Exception ignored in: Traceback (most recent call last): File "/usr/lib64/python3.12/multiprocessing/pool.py", line 271, in __del__ File "/usr/lib64/python3.12/multiprocessing/queues.py", line 399, in put File "/usr/lib64/python3.12/multiprocessing/connection.py", line 200, in send_bytes File "/usr/lib64/python3.12/multiprocessing/connection.py", line 416, in _send_bytes AttributeError: 'NoneType' object has no attribute 'pack' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.4u52BG + umask 022 + cd /builddir/build/BUILD/pymol-2.5.0-build + '[' /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/pymol-2.5.0-build + mkdir /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pymol-open-source-2.5.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT --prefix /usr --use-msgpackc=c++11 --use-openmp=yes --pymol-path=/usr/lib64/python3.12/site-packages/pymol /usr/lib64/python3.12/site-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W' /usr/lib64/python3.12/site-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p' /usr/lib64/python3.12/site-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8' /usr/lib64/python3.12/site-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W' /usr/lib64/python3.12/site-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p' /usr/lib64/python3.12/site-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8' /usr/lib/python3.12/site-packages/setuptools/command/sdist.py:115: SetuptoolsDeprecationWarning: `build_py` command does not inherit from setuptools' `build_py`. !! ******************************************************************************** Custom 'build_py' does not implement 'get_data_files_without_manifest'. Please extend command classes from setuptools instead of distutils. See https://peps.python.org/pep-0632/ for details. ******************************************************************************** !! self._add_data_files(self._safe_data_files(build_py)) copying data -> /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/data copying test -> /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/test copying examples -> /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/examples Exception ignored in: Traceback (most recent call last): File "/usr/lib64/python3.12/multiprocessing/pool.py", line 271, in __del__ File "/usr/lib64/python3.12/multiprocessing/queues.py", line 399, in put File "/usr/lib64/python3.12/multiprocessing/connection.py", line 200, in send_bytes File "/usr/lib64/python3.12/multiprocessing/connection.py", line 416, in _send_bytes AttributeError: 'NoneType' object has no attribute 'pack' + rm -rfv /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/bin/__pycache__ + echo '#!/bin/sh' + echo 'export PYMOL_PATH=/usr/lib64/python3.12/site-packages/pymol' + echo 'exec /usr/bin/python3 /usr/lib64/python3.12/site-packages/pymol/__init__.py "$@"' + cp -a data examples test /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/ + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/examples/devel/link_demo.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/examples/devel/particle01.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/examples/devel/particle02.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/test/inp/B03.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/test/inp/B05.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/test/inp/B11.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/test/ref/T01.log + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/pymol_path/examples/devel/link_demo.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/pymol_path/examples/devel/particle01.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/pymol_path/examples/devel/particle02.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/pymol_path/test/inp/B03.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/pymol_path/test/inp/B05.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/pymol_path/test/inp/B11.py + rm -f /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12/site-packages/pymol/pymol_path/test/ref/T01.log + mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/bin + install -p -m 755 pymol /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/bin/ + desktop-file-install --vendor= --dir=/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/applications /builddir/build/SOURCES/pymol.desktop + mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/pixmaps + install -p -m 644 /builddir/build/SOURCES/pymol.png /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/pixmaps/ + mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/metainfo + install -p -m 644 /builddir/build/SOURCES/pymol.appdata.xml /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/metainfo/ + appstream-util validate-relax --nonet /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT//usr/share/metainfo/pymol.appdata.xml /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT//usr/share/metainfo/pymol.appdata.xml: OK + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.5.0-11.fc41 --unique-debug-suffix -2.5.0-11.fc41.ppc64le --unique-debug-src-base pymol-2.5.0-11.fc41.ppc64le --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0 find-debuginfo: starting Extracting debug info from 2 files DWARF-compressing 2 files sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/pymol-2.5.0-11.fc41.ppc64le 51230 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/pymol from /bin/sh to #!/usr/bin/sh *** WARNING: ./usr/src/debug/pymol-2.5.0-11.fc41.ppc64le/layer0/GraphicsUtil.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/pymol-2.5.0-11.fc41.ppc64le/layer0/GraphicsUtil.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/pymol-2.5.0-11.fc41.ppc64le/layer3/MaeExportHelpers.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/pymol-2.5.0-11.fc41.ppc64le/layer3/MaeExportHelpers.h is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib64/python3.12 using python3.12 /usr/lib64/python3.12/site-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/data/chempy/tinker/make_simple.py:147: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.12/site-packages/pymol/data/chempy/tinker/make_simple.py:151: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.12/site-packages/pymol/data/chempy/tinker/make_simple.py:147: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.12/site-packages/pymol/data/chempy/tinker/make_simple.py:151: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.12/site-packages/pymol/examples/devel/webgui02.py:156: SyntaxWarning: invalid escape sequence '\=' /usr/lib64/python3.12/site-packages/pymol/examples/devel/webgui02.py:156: SyntaxWarning: invalid escape sequence '\=' /usr/lib64/python3.12/site-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W' /usr/lib64/python3.12/site-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W' /usr/lib64/python3.12/site-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.12/site-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p' /usr/lib64/python3.12/site-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p' /usr/lib64/python3.12/site-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8' /usr/lib64/python3.12/site-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8' Bytecompiling .py files below /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT Cannot initialize handler pyc: ModuleNotFoundError: No module named 'marshalparser' [src/multiprocess.rs:66:9] &cmd = Command { program: "/usr/bin/add-determinism", args: [ "/usr/bin/add-determinism", "--socket", "3", "--brp", "--handler", "ar,jar,javadoc", ], env: CommandEnv { clear: false, vars: { "SOURCE_DATE_EPOCH": Some( "1717804800", ), }, }, create_pidfd: false, } Bye! Bye! Reading /builddir/build/BUILD/pymol-2.5.0-build/SPECPARTS/rpm-debuginfo.specpart Processing files: pymol-2.5.0-11.fc41.ppc64le Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.13pscj + umask 022 + cd /builddir/build/BUILD/pymol-2.5.0-build + cd pymol-open-source-2.5.0 + DOCDIR=/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol + cp -pr /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0/AUTHORS /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol + cp -pr /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0/DEVELOPERS /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol + cp -pr /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0/README.md /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol + cp -pr /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0/ChangeLog /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/doc/pymol Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Yt4B50 + RPM_EC=0 ++ jobs -p + exit 0 + umask 022 + cd /builddir/build/BUILD/pymol-2.5.0-build + cd pymol-open-source-2.5.0 + LICENSEDIR=/builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/licenses/pymol + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/licenses/pymol + cp -pr /builddir/build/BUILD/pymol-2.5.0-build/pymol-open-source-2.5.0/LICENSE /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT/usr/share/licenses/pymol + RPM_EC=0 ++ jobs -p + exit 0 Provides: PyMOL(ppc-64) = 0:2.5.0-11.fc41 application() application(pymol.desktop) metainfo() metainfo(pymol.appdata.xml) pymol = 2.5.0-11.fc41 pymol(ppc-64) = 2.5.0-11.fc41 python3.12dist(pymol) = 2.5 python3dist(pymol) = 2.5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/sh ld64.so.2()(64bit) ld64.so.2(GLIBC_2.23)(64bit) libGL.so.1()(64bit) libGLEW.so.2.2()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libfreetype.so.6()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.32)(64bit) libm.so.6(GLIBC_2.35)(64bit) libm.so.6(GLIBC_2.38)(64bit) libnetcdf.so.19()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libxml2.so.2(LIBXML2_2.6.3)(64bit) python(abi) = 3.12 rtld(GNU_HASH) Processing files: pymol-debugsource-2.5.0-11.fc41.ppc64le Provides: pymol-debugsource = 2.5.0-11.fc41 pymol-debugsource(ppc-64) = 2.5.0-11.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: pymol-debuginfo-2.5.0-11.fc41.ppc64le Provides: debuginfo(build-id) = 8e35305563ab7ae556f5153810f6f4aa82e4b75a debuginfo(build-id) = e61057d8dac56ec8fbf62cc8857a2f0ea2fdb44c pymol-debuginfo = 2.5.0-11.fc41 pymol-debuginfo(ppc-64) = 2.5.0-11.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: pymol-debugsource(ppc-64) = 2.5.0-11.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/pymol-2.5.0-build/BUILDROOT Wrote: /builddir/build/RPMS/pymol-debugsource-2.5.0-11.fc41.ppc64le.rpm Wrote: /builddir/build/RPMS/pymol-debuginfo-2.5.0-11.fc41.ppc64le.rpm Wrote: /builddir/build/RPMS/pymol-2.5.0-11.fc41.ppc64le.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.yaBGY2 + umask 022 + cd /builddir/build/BUILD/pymol-2.5.0-build + test -d /builddir/build/BUILD/pymol-2.5.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/pymol-2.5.0-build + rm -rf /builddir/build/BUILD/pymol-2.5.0-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild pymol-2.5.0-11.fc41.src.rpm Finish: build phase for pymol-2.5.0-11.fc41.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-ppc64le-1717841492.444536/root/var/log/dnf.log /var/lib/mock/fedora-39-ppc64le-1717841492.444536/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-ppc64le-1717841492.444536/root/var/log/dnf.rpm.log INFO: Done(/var/lib/copr-rpmbuild/results/pymol-2.5.0-11.fc41.src.rpm) Config(child) 17 minutes 8 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "pymol-debugsource", "epoch": null, "version": "2.5.0", "release": "11.fc41", "arch": "ppc64le" }, { "name": "pymol-debuginfo", "epoch": null, "version": "2.5.0", "release": "11.fc41", "arch": "ppc64le" }, { "name": "pymol", "epoch": null, "version": "2.5.0", "release": "11.fc41", "arch": "ppc64le" }, { "name": "pymol", "epoch": null, "version": "2.5.0", "release": "11.fc41", "arch": "src" } ] } RPMResults finished