Warning: Permanently added '54.147.23.180' (ED25519) to the list of known hosts. 100 874k 100 874k 0 0 41.5M 0 --:--:-- --:--:-- --:--:-- 42.6M INFO: Reading stdout from command: md5sum BiocParallel_1.30.3.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-o36myf74/R-BiocParallel/R-BiocParallel.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-o36myf74/R-BiocParallel --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714051725.099111 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.5 starting (python version = 3.12.1, NVR = mock-5.5-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-o36myf74/R-BiocParallel/R-BiocParallel.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-o36myf74/R-BiocParallel --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714051725.099111 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-o36myf74/R-BiocParallel/R-BiocParallel.spec) Config(fedora-39-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.5 INFO: Mock Version: 5.5 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1714051725.099111/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-x86_64-bootstrap-1714051725.099111/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/98164f21fee5ab545da2166f64f2d857f2f9a2f123223e453df07d451c9acd05/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/98164f21fee5ab545da2166f64f2d857f2f9a2f123223e453df07d451c9acd05/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 98 MB/s | 18 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 85 MB/s | 75 MB 00:00 fedora 52 MB/s | 89 MB 00:01 updates 43 MB/s | 35 MB 00:00 Last metadata expiration check: 0:00:02 ago on Thu Apr 25 13:29:24 2024. Package python3-dnf-4.19.2-1.fc39.noarch is already installed. Dependencies resolved. ========================================================================================================================= Package Arch Version Repository Size ========================================================================================================================= Installing: python3-dnf-plugins-core noarch 4.6.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 302 k Upgrading: dnf noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 491 k dnf-data noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40 k python3-dnf noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 553 k yum noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k Installing dependencies: dbus-libs x86_64 1:1.14.10-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 156 k python3-dateutil noarch 1:2.8.2-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 345 k python3-dbus x86_64 1.3.2-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 145 k python3-distro noarch 1.9.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45 k python3-six noarch 1.16.0-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python3-systemd x86_64 235-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k Transaction Summary ========================================================================================================================= Install 7 Packages Upgrade 4 Packages Total download size: 2.2 M Downloading Packages: (1/11): python3-dateutil-2.8.2-13.fc40.noarch.r 3.4 MB/s | 345 kB 00:00 (2/11): dbus-libs-1.14.10-3.fc40.x86_64.rpm 1.4 MB/s | 156 kB 00:00 (3/11): python3-dbus-1.3.2-6.fc40.x86_64.rpm 1.2 MB/s | 145 kB 00:00 (4/11): python3-distro-1.9.0-3.fc40.noarch.rpm 2.3 MB/s | 45 kB 00:00 (5/11): python3-six-1.16.0-14.fc40.noarch.rpm 1.9 MB/s | 41 kB 00:00 (6/11): python3-systemd-235-9.fc40.x86_64.rpm 4.7 MB/s | 100 kB 00:00 (7/11): python3-dnf-plugins-core-4.6.0-1.fc41.n 7.7 MB/s | 302 kB 00:00 (8/11): dnf-data-4.19.2-1.fc41.noarch.rpm 1.9 MB/s | 40 kB 00:00 (9/11): yum-4.19.2-1.fc41.noarch.rpm 2.6 MB/s | 37 kB 00:00 (10/11): python3-dnf-4.19.2-1.fc41.noarch.rpm 16 MB/s | 553 kB 00:00 (11/11): dnf-4.19.2-1.fc41.noarch.rpm 10 MB/s | 491 kB 00:00 -------------------------------------------------------------------------------- Total 12 MB/s | 2.2 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : dnf-data-4.19.2-1.fc41.noarch 1/15 Upgrading : python3-dnf-4.19.2-1.fc41.noarch 2/15 Upgrading : dnf-4.19.2-1.fc41.noarch 3/15 Running scriptlet: dnf-4.19.2-1.fc41.noarch 3/15 Installing : python3-systemd-235-9.fc40.x86_64 4/15 Installing : python3-six-1.16.0-14.fc40.noarch 5/15 Installing : python3-dateutil-1:2.8.2-13.fc40.noarch 6/15 Installing : python3-distro-1.9.0-3.fc40.noarch 7/15 Installing : dbus-libs-1:1.14.10-3.fc40.x86_64 8/15 Installing : python3-dbus-1.3.2-6.fc40.x86_64 9/15 Installing : python3-dnf-plugins-core-4.6.0-1.fc41.noarch 10/15 Upgrading : yum-4.19.2-1.fc41.noarch 11/15 Cleanup : yum-4.19.2-1.fc39.noarch 12/15 Running scriptlet: dnf-4.19.2-1.fc39.noarch 13/15 Cleanup : dnf-4.19.2-1.fc39.noarch 13/15 Running scriptlet: dnf-4.19.2-1.fc39.noarch 13/15 Cleanup : python3-dnf-4.19.2-1.fc39.noarch 14/15 Cleanup : dnf-data-4.19.2-1.fc39.noarch 15/15 Running scriptlet: dnf-data-4.19.2-1.fc39.noarch 15/15 Verifying : dbus-libs-1:1.14.10-3.fc40.x86_64 1/15 Verifying : python3-dateutil-1:2.8.2-13.fc40.noarch 2/15 Verifying : python3-dbus-1.3.2-6.fc40.x86_64 3/15 Verifying : python3-distro-1.9.0-3.fc40.noarch 4/15 Verifying : python3-dnf-plugins-core-4.6.0-1.fc41.noarch 5/15 Verifying : python3-six-1.16.0-14.fc40.noarch 6/15 Verifying : python3-systemd-235-9.fc40.x86_64 7/15 Verifying : dnf-4.19.2-1.fc41.noarch 8/15 Verifying : dnf-4.19.2-1.fc39.noarch 9/15 Verifying : dnf-data-4.19.2-1.fc41.noarch 10/15 Verifying : dnf-data-4.19.2-1.fc39.noarch 11/15 Verifying : python3-dnf-4.19.2-1.fc41.noarch 12/15 Verifying : python3-dnf-4.19.2-1.fc39.noarch 13/15 Verifying : yum-4.19.2-1.fc41.noarch 14/15 Verifying : yum-4.19.2-1.fc39.noarch 15/15 Upgraded: dnf-4.19.2-1.fc41.noarch dnf-data-4.19.2-1.fc41.noarch python3-dnf-4.19.2-1.fc41.noarch yum-4.19.2-1.fc41.noarch Installed: dbus-libs-1:1.14.10-3.fc40.x86_64 python3-dateutil-1:2.8.2-13.fc40.noarch python3-dbus-1.3.2-6.fc40.x86_64 python3-distro-1.9.0-3.fc40.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch python3-six-1.16.0-14.fc40.noarch python3-systemd-235-9.fc40.x86_64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1714051725.099111/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc41.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch yum-4.19.2-1.fc41.noarch Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 153 MB/s | 18 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 75 MB/s | 75 MB 00:00 fedora 54 MB/s | 89 MB 00:01 updates 54 MB/s | 35 MB 00:00 Last metadata expiration check: 0:00:02 ago on Thu Apr 25 13:30:16 2024. Dependencies resolved. ======================================================================================================================================== Package Arch Version Repository Size ======================================================================================================================================== Installing group/module packages: bash x86_64 5.2.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 M bzip2 x86_64 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 52 k coreutils x86_64 9.5-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M cpio x86_64 2.15-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 285 k diffutils x86_64 3.10-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 397 k fedora-release-common noarch 41-0.9 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k findutils x86_64 1:4.9.0-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 482 k gawk x86_64 5.3.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M glibc-minimal-langpack x86_64 2.39.9000-14.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 110 k grep x86_64 3.11-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 290 k gzip x86_64 1.13-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 164 k info x86_64 7.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 182 k patch x86_64 2.7.6-24.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 131 k redhat-rpm-config noarch 288-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 75 k rpm-build x86_64 4.19.1.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 70 k sed x86_64 4.9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 309 k shadow-utils x86_64 2:4.15.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 M tar x86_64 2:1.35-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 847 k unzip x86_64 6.0-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 185 k util-linux x86_64 2.40-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M which x86_64 2.21-41.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k xz x86_64 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 532 k Installing dependencies: alternatives x86_64 1.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40 k ansible-srpm-macros noarch 1-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k audit-libs x86_64 4.0.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 126 k authselect x86_64 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 141 k authselect-libs x86_64 1.5.0-5.fc41 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======================================================================================================================================== Install 153 Packages Total download size: 52 M Installed size: 179 M Downloading Packages: (1/153): gdb-minimal-14.2-5.fc41.x86_64.rpm 125 MB/s | 4.3 MB 00:00 (2/153): ansible-srpm-macros-1-15.fc41.noarch.r 288 kB/s | 21 kB 00:00 (3/153): alternatives-1.26-3.fc40.x86_64.rpm 412 kB/s | 40 kB 00:00 (4/153): audit-libs-4.0.1-1.fc41.x86_64.rpm 1.7 MB/s | 126 kB 00:00 (5/153): authselect-1.5.0-5.fc41.x86_64.rpm 3.9 MB/s | 141 kB 00:00 (6/153): basesystem-11-20.fc40.noarch.rpm 464 kB/s | 7.2 kB 00:00 (7/153): authselect-libs-1.5.0-5.fc41.x86_64.rp 4.5 MB/s | 205 kB 00:00 (8/153): bash-5.2.26-3.fc40.x86_64.rpm 37 MB/s | 1.8 MB 00:00 (9/153): bzip2-1.0.8-18.fc40.x86_64.rpm 2.5 MB/s | 52 kB 00:00 (10/153): binutils-gold-2.42.50-6.fc41.x86_64.r 17 MB/s | 783 kB 00:00 (11/153): bzip2-libs-1.0.8-18.fc40.x86_64.rpm 1.8 MB/s | 41 kB 00:00 (12/153): ca-certificates-2023.2.62_v7.0.401-6. 37 MB/s | 862 kB 00:00 (13/153): binutils-2.42.50-6.fc41.x86_64.rpm 63 MB/s | 6.3 MB 00:00 (14/153): coreutils-9.5-1.fc41.x86_64.rpm 26 MB/s | 1.1 MB 00:00 (15/153): coreutils-common-9.5-1.fc41.x86_64.rp 67 MB/s | 2.1 MB 00:00 (16/153): cpio-2.15-1.fc40.x86_64.rpm 12 MB/s | 285 kB 00:00 (17/153): cracklib-2.9.11-5.fc40.x86_64.rpm 3.8 MB/s | 82 kB 00:00 (18/153): curl-8.7.1-1.fc41.x86_64.rpm 13 MB/s | 306 kB 00:00 (19/153): crypto-policies-20240320-1.git58e3d95 2.6 MB/s | 65 kB 00:00 (20/153): debugedit-5.0-14.fc40.x86_64.rpm 3.9 MB/s | 79 kB 00:00 (21/153): cyrus-sasl-lib-2.1.28-19.fc40.x86_64. 30 MB/s | 789 kB 00:00 (22/153): diffutils-3.10-5.fc40.x86_64.rpm 17 MB/s | 397 kB 00:00 (23/153): dwz-0.15-6.fc40.x86_64.rpm 8.2 MB/s | 138 kB 00:00 (24/153): efi-srpm-macros-5-11.fc40.noarch.rpm 1.5 MB/s | 22 kB 00:00 (25/153): ed-1.20.2-1.fc41.x86_64.rpm 4.1 MB/s | 82 kB 00:00 (26/153): elfutils-debuginfod-client-0.191-7.fc 2.5 MB/s | 38 kB 00:00 (27/153): elfutils-default-yama-scope-0.191-7.f 916 kB/s | 13 kB 00:00 (28/153): elfutils-0.191-7.fc41.x86_64.rpm 23 MB/s | 524 kB 00:00 (29/153): elfutils-libelf-0.191-7.fc41.x86_64.r 12 MB/s | 208 kB 00:00 (30/153): fedora-gpg-keys-41-0.1.noarch.rpm 7.8 MB/s | 121 kB 00:00 (31/153): elfutils-libs-0.191-7.fc41.x86_64.rpm 9.3 MB/s | 258 kB 00:00 (32/153): fedora-release-41-0.9.noarch.rpm 759 kB/s | 11 kB 00:00 (33/153): fedora-release-common-41-0.9.noarch.r 1.3 MB/s | 22 kB 00:00 (34/153): fedora-release-identity-basic-41-0.9. 746 kB/s | 12 kB 00:00 (35/153): fedora-repos-41-0.1.noarch.rpm 471 kB/s | 9.3 kB 00:00 (36/153): fedora-repos-rawhide-41-0.1.noarch.rp 594 kB/s | 8.9 kB 00:00 (37/153): file-5.45-5.fc41.x86_64.rpm 2.4 MB/s | 49 kB 00:00 (38/153): filesystem-3.18-9.fc41.x86_64.rpm 55 MB/s | 1.1 MB 00:00 (39/153): file-libs-5.45-5.fc41.x86_64.rpm 29 MB/s | 763 kB 00:00 (40/153): findutils-4.9.0-8.fc40.x86_64.rpm 21 MB/s | 482 kB 00:00 (41/153): 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libxml2-2.12.6-1.fc41.x86_64.rpm 27 MB/s | 686 kB 00:00 (101/153): libzstd-1.5.6-1.fc41.x86_64.rpm 11 MB/s | 309 kB 00:00 (102/153): lua-srpm-macros-1-13.fc40.noarch.rpm 554 kB/s | 8.7 kB 00:00 (103/153): lz4-libs-1.9.4-6.fc40.x86_64.rpm 4.2 MB/s | 67 kB 00:00 (104/153): mpfr-4.2.1-3.fc40.x86_64.rpm 21 MB/s | 349 kB 00:00 (105/153): ncurses-base-6.4-12.20240127.fc40.no 3.8 MB/s | 64 kB 00:00 (106/153): ncurses-libs-6.4-12.20240127.fc40.x8 16 MB/s | 332 kB 00:00 (107/153): ocaml-srpm-macros-9-3.fc40.noarch.rp 579 kB/s | 9.1 kB 00:00 (108/153): openblas-srpm-macros-2-17.fc41.noarc 402 kB/s | 7.7 kB 00:00 (109/153): openldap-2.6.7-1.fc40.x86_64.rpm 15 MB/s | 254 kB 00:00 (110/153): openssl-libs-3.2.1-6.fc41.x86_64.rpm 80 MB/s | 2.3 MB 00:00 (111/153): p11-kit-0.25.3-4.fc40.x86_64.rpm 23 MB/s | 476 kB 00:00 (112/153): p11-kit-trust-0.25.3-4.fc40.x86_64.r 6.3 MB/s | 132 kB 00:00 (113/153): pam-libs-1.6.1-1.fc41.x86_64.rpm 3.7 MB/s | 57 kB 00:00 (114/153): pam-1.6.1-1.fc41.x86_64.rpm 28 MB/s 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readline-8.2-8.fc40.x86_64.rpm 13 MB/s | 213 kB 00:00 (130/153): redhat-rpm-config-288-1.fc41.noarch. 5.0 MB/s | 75 kB 00:00 (131/153): rpm-4.19.1.1-1.fc40.x86_64.rpm 23 MB/s | 512 kB 00:00 (132/153): rpm-build-4.19.1.1-1.fc40.x86_64.rpm 4.8 MB/s | 70 kB 00:00 (133/153): rpm-build-libs-4.19.1.1-1.fc40.x86_6 4.5 MB/s | 95 kB 00:00 (134/153): rpm-sequoia-1.6.0-2.fc40.x86_64.rpm 44 MB/s | 847 kB 00:00 (135/153): rpm-libs-4.19.1.1-1.fc40.x86_64.rpm 13 MB/s | 309 kB 00:00 (136/153): rust-srpm-macros-26.2-1.fc41.noarch. 603 kB/s | 13 kB 00:00 (137/153): sed-4.9-1.fc40.x86_64.rpm 17 MB/s | 309 kB 00:00 (138/153): setup-2.14.5-2.fc40.noarch.rpm 8.0 MB/s | 148 kB 00:00 (139/153): shadow-utils-4.15.1-2.fc41.x86_64.rp 50 MB/s | 1.3 MB 00:00 (140/153): sqlite-libs-3.45.2-1.fc41.x86_64.rpm 26 MB/s | 706 kB 00:00 (141/153): systemd-libs-255.5-1.fc41.x86_64.rpm 19 MB/s | 706 kB 00:00 (142/153): tar-1.35-3.fc40.x86_64.rpm 39 MB/s | 847 kB 00:00 (143/153): unzip-6.0-63.fc40.x86_64.rpm 7.2 MB/s | 185 kB 00:00 (144/153): util-linux-core-2.40-13.fc41.x86_64. 30 MB/s | 520 kB 00:00 (145/153): util-linux-2.40-13.fc41.x86_64.rpm 45 MB/s | 1.2 MB 00:00 (146/153): which-2.21-41.fc40.x86_64.rpm 2.0 MB/s | 41 kB 00:00 (147/153): xxhash-libs-0.8.2-2.fc40.x86_64.rpm 2.1 MB/s | 37 kB 00:00 (148/153): xz-libs-5.4.6-3.fc41.x86_64.rpm 6.4 MB/s | 110 kB 00:00 (149/153): xz-5.4.6-3.fc41.x86_64.rpm 17 MB/s | 532 kB 00:00 (150/153): zig-srpm-macros-1-2.fc40.noarch.rpm 411 kB/s | 8.0 kB 00:00 (151/153): zip-3.0-40.fc40.x86_64.rpm 17 MB/s | 265 kB 00:00 (152/153): zstd-1.5.6-1.fc41.x86_64.rpm 28 MB/s | 479 kB 00:00 (153/153): zlib-ng-compat-2.1.6-2.fc40.x86_64.r 4.0 MB/s | 77 kB 00:00 -------------------------------------------------------------------------------- Total 45 MB/s | 52 MB 00:01 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240320-1.git58e3d95.fc41.noarch curl-8.7.1-1.fc41.x86_64 cyrus-sasl-lib-2.1.28-19.fc40.x86_64 debugedit-5.0-14.fc40.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.2-1.fc41.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.x86_64 elfutils-debuginfod-client-0.191-7.fc41.x86_64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.x86_64 elfutils-libs-0.191-7.fc41.x86_64 fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.9.noarch fedora-release-common-41-0.9.noarch fedora-release-identity-basic-41-0.9.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.x86_64 file-libs-5.45-5.fc41.x86_64 filesystem-3.18-9.fc41.x86_64 findutils-1:4.9.0-8.fc40.x86_64 fonts-srpm-macros-1:2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.2-5.fc41.x86_64 gdbm-1:1.23-6.fc40.x86_64 gdbm-libs-1:1.23-6.fc40.x86_64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-14.fc41.x86_64 glibc-common-2.39.9000-14.fc41.x86_64 glibc-gconv-extra-2.39.9000-14.fc41.x86_64 glibc-minimal-langpack-2.39.9000-14.fc41.x86_64 gmp-1:6.3.0-1.fc41.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-7.fc40.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.2-3.fc41.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40-13.fc41.x86_64 libbrotli-1.1.0-3.fc40.x86_64 libcap-2.69-8.fc41.x86_64 libcap-ng-0.8.5-1.fc41.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.7.1-1.fc41.x86_64 libeconf-0.6.2-1.fc41.x86_64 libevent-2.1.12-12.fc40.x86_64 libfdisk-2.40-13.fc41.x86_64 libffi-3.4.6-1.fc41.x86_64 libgcc-14.0.1-0.15.fc41.x86_64 libgomp-14.0.1-0.15.fc41.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40-13.fc41.x86_64 libnghttp2-1.61.0-1.fc41.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.0-1.fc40.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.6-4.fc40.x86_64 libsemanage-3.6-3.fc40.x86_64 libsepol-3.6-3.fc40.x86_64 libsmartcols-2.40-13.fc41.x86_64 libssh-0.10.6-6.fc41.x86_64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.15.fc41.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.4-1.rc3.fc41.x86_64 libtool-ltdl-2.4.7-10.fc40.x86_64 libunistring-1.1-7.fc41.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40-13.fc41.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.6-1.fc41.x86_64 libzstd-1.5.6-1.fc41.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-3.fc40.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.x86_64 openssl-libs-1:3.2.1-6.fc41.x86_64 p11-kit-0.25.3-4.fc40.x86_64 p11-kit-trust-0.25.3-4.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-1.fc41.x86_64 pam-libs-1.6.1-1.fc41.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.43-1.fc41.x86_64 pcre2-syntax-10.43-1.fc41.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.x86_64 pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.x86_64 popt-1.19-6.fc40.x86_64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.0-1.fc41.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-288-1.fc41.noarch rpm-4.19.1.1-1.fc40.x86_64 rpm-build-4.19.1.1-1.fc40.x86_64 rpm-build-libs-4.19.1.1-1.fc40.x86_64 rpm-libs-4.19.1.1-1.fc40.x86_64 rpm-sequoia-1.6.0-2.fc40.x86_64 rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.x86_64 setup-2.14.5-2.fc40.noarch shadow-utils-2:4.15.1-2.fc41.x86_64 sqlite-libs-3.45.2-1.fc41.x86_64 systemd-libs-255.5-1.fc41.x86_64 tar-2:1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40-13.fc41.x86_64 util-linux-core-2.40-13.fc41.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-1:5.4.6-3.fc41.x86_64 xz-libs-1:5.4.6-3.fc41.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-2.fc40.x86_64 zstd-1.5.6-1.fc41.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-3.fc40.x86_64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-1.fc41.x86_64 authselect-1.5.0-5.fc41.x86_64 authselect-libs-1.5.0-5.fc41.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.42.50-6.fc41.x86_64 binutils-gold-2.42.50-6.fc41.x86_64 bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.x86_64 coreutils-common-9.5-1.fc41.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240320-1.git58e3d95.fc41.noarch curl-8.7.1-1.fc41.x86_64 cyrus-sasl-lib-2.1.28-19.fc40.x86_64 debugedit-5.0-14.fc40.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.2-1.fc41.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.x86_64 elfutils-debuginfod-client-0.191-7.fc41.x86_64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.x86_64 elfutils-libs-0.191-7.fc41.x86_64 fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.9.noarch fedora-release-common-41-0.9.noarch fedora-release-identity-basic-41-0.9.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.x86_64 file-libs-5.45-5.fc41.x86_64 filesystem-3.18-9.fc41.x86_64 findutils-4.9.0-8.fc40.x86_64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.2-5.fc41.x86_64 gdbm-1.23-6.fc40.x86_64 gdbm-libs-1.23-6.fc40.x86_64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-14.fc41.x86_64 glibc-common-2.39.9000-14.fc41.x86_64 glibc-gconv-extra-2.39.9000-14.fc41.x86_64 glibc-minimal-langpack-2.39.9000-14.fc41.x86_64 gmp-6.3.0-1.fc41.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-7.fc40.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.2-3.fc41.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40-13.fc41.x86_64 libbrotli-1.1.0-3.fc40.x86_64 libcap-2.69-8.fc41.x86_64 libcap-ng-0.8.5-1.fc41.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.7.1-1.fc41.x86_64 libeconf-0.6.2-1.fc41.x86_64 libevent-2.1.12-12.fc40.x86_64 libfdisk-2.40-13.fc41.x86_64 libffi-3.4.6-1.fc41.x86_64 libgcc-14.0.1-0.15.fc41.x86_64 libgomp-14.0.1-0.15.fc41.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40-13.fc41.x86_64 libnghttp2-1.61.0-1.fc41.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.0-1.fc40.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.6-4.fc40.x86_64 libsemanage-3.6-3.fc40.x86_64 libsepol-3.6-3.fc40.x86_64 libsmartcols-2.40-13.fc41.x86_64 libssh-0.10.6-6.fc41.x86_64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.15.fc41.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.4-1.rc3.fc41.x86_64 libtool-ltdl-2.4.7-10.fc40.x86_64 libunistring-1.1-7.fc41.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40-13.fc41.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.6-1.fc41.x86_64 libzstd-1.5.6-1.fc41.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-3.fc40.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.x86_64 openssl-libs-3.2.1-6.fc41.x86_64 p11-kit-0.25.3-4.fc40.x86_64 p11-kit-trust-0.25.3-4.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-1.fc41.x86_64 pam-libs-1.6.1-1.fc41.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.43-1.fc41.x86_64 pcre2-syntax-10.43-1.fc41.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.x86_64 pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.x86_64 popt-1.19-6.fc40.x86_64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.0-1.fc41.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-288-1.fc41.noarch rpm-4.19.1.1-1.fc40.x86_64 rpm-build-4.19.1.1-1.fc40.x86_64 rpm-build-libs-4.19.1.1-1.fc40.x86_64 rpm-libs-4.19.1.1-1.fc40.x86_64 rpm-sequoia-1.6.0-2.fc40.x86_64 rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.x86_64 setup-2.14.5-2.fc40.noarch shadow-utils-4.15.1-2.fc41.x86_64 sqlite-libs-3.45.2-1.fc41.x86_64 systemd-libs-255.5-1.fc41.x86_64 tar-1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40-13.fc41.x86_64 util-linux-core-2.40-13.fc41.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-5.4.6-3.fc41.x86_64 xz-libs-5.4.6-3.fc41.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-2.fc40.x86_64 zstd-1.5.6-1.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1714003200 Wrote: /builddir/build/SRPMS/R-BiocParallel-1.30.3-7.fc41.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-39-x86_64-1714051725.099111/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1714051725.099111/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1714051725.099111/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1714051725.099111/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-o36myf74/R-BiocParallel/R-BiocParallel.spec) Config(child) 1 minutes 50 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-BiocParallel-1.30.3-7.fc41.src.rpm) Config(fedora-39-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1714051725.099111/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1714051725.099111/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1714051725.099111/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc41.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch yum-4.19.2-1.fc41.noarch Finish: chroot init Start: build phase for R-BiocParallel-1.30.3-7.fc41.src.rpm Start: build setup for R-BiocParallel-1.30.3-7.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1714003200 Wrote: /builddir/build/SRPMS/R-BiocParallel-1.30.3-7.fc41.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 83 kB/s | 1.5 kB 00:00 Copr repository 80 MB/s | 18 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 69 kB/s | 3.8 kB 00:00 fedora 79 kB/s | 24 kB 00:00 updates 419 kB/s | 21 kB 00:00 Dependencies resolved. ============================================================================================================================================ Package Arch Version Repository Size ============================================================================================================================================ Installing: R-BH-devel noarch 1.78.0.0-10.fc41 copr_base 9.3 M R-core x86_64 4.4.0-1.fc41~bootstrap copr_base 63 M R-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 11 k R-futile.logger noarch 1.4.3-22.fc40 copr_base 115 k R-snow noarch 0.4.4-15.fc40 copr_base 122 k autoconf noarch 2.72-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 817 k automake noarch 1.16.5-16.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 676 k gcc x86_64 14.0.1-0.15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 M gcc-c++ x86_64 14.0.1-0.15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14 M Installing dependencies: R-core-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 88 k R-formatR noarch 1.13-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 159 k R-futile.options noarch 1.0.1-15.fc40 copr_base 33 k R-java x86_64 4.4.0-1.fc41~bootstrap copr_base 11 k R-java-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 11 k R-lambda.r noarch 1.2.4-15.fc40 copr_base 128 k R-rpm-macros noarch 1.2.1-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11 k abattis-cantarell-vf-fonts noarch 0.301-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 120 k alsa-lib x86_64 1.2.11-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 499 k annobin-docs noarch 12.51-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 89 k annobin-plugin-gcc x86_64 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============================================================================================================================================ Install 232 Packages Total download size: 295 M Installed size: 1.0 G Downloading Packages: (1/232): R-core-devel-4.4.0-1.fc41~bootstrap.x8 5.7 MB/s | 88 kB 00:00 (2/232): R-devel-4.4.0-1.fc41~bootstrap.x86_64. 4.9 MB/s | 11 kB 00:00 (3/232): R-futile.logger-1.4.3-22.fc40.noarch.r 14 MB/s | 115 kB 00:00 (4/232): R-futile.options-1.0.1-15.fc40.noarch. 5.5 MB/s | 33 kB 00:00 (5/232): R-java-4.4.0-1.fc41~bootstrap.x86_64.r 3.3 MB/s | 11 kB 00:00 (6/232): R-java-devel-4.4.0-1.fc41~bootstrap.x8 5.0 MB/s | 11 kB 00:00 (7/232): R-lambda.r-1.2.4-15.fc40.noarch.rpm 21 MB/s | 128 kB 00:00 (8/232): R-snow-0.4.4-15.fc40.noarch.rpm 16 MB/s | 122 kB 00:00 (9/232): graphite2-1.3.14-15.fc40.x86_64.rpm 28 MB/s | 95 kB 00:00 (10/232): graphite2-devel-1.3.14-15.fc40.x86_64 7.1 MB/s | 21 kB 00:00 (11/232): libRmath-4.4.0-1.fc41~bootstrap.x86_6 35 MB/s | 124 kB 00:00 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Running transaction test Transaction test succeeded. Running transaction Running scriptlet: copy-jdk-configs-4.1-5.fc40.noarch 1/1 Running scriptlet: crypto-policies-scripts-20240320-1.git58e3d95.fc41.n 1/1 Running scriptlet: java-21-openjdk-headless-1:21.0.2.0.13-3.fc41.x86_64 1/1 Preparing : 1/1 Installing : zlib-ng-compat-devel-2.1.6-2.fc40.x86_64 1/232 Installing : xorg-x11-proto-devel-2024.1-1.fc41.noarch 2/232 Installing : nspr-4.35.0-22.fc41.x86_64 3/232 Installing : libgfortran-14.0.1-0.15.fc41.x86_64 4/232 Installing : nss-util-3.99.0-1.fc41.x86_64 5/232 Installing : libquadmath-14.0.1-0.15.fc41.x86_64 6/232 Installing : libpng-2:1.6.40-3.fc40.x86_64 7/232 Installing : libmpc-1.3.1-5.fc40.x86_64 8/232 Installing : tcl-1:8.6.14-1.fc41.x86_64 9/232 Installing : libicu-74.2-1.fc40.x86_64 10/232 Installing : fonts-filesystem-1:2.0.5-14.fc40.noarch 11/232 Installing : libicu-devel-74.2-1.fc40.x86_64 12/232 Installing : tcl-devel-1:8.6.14-1.fc41.x86_64 13/232 Installing : libpng-devel-2:1.6.40-3.fc40.x86_64 14/232 Installing : 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R-lambda.r-1.2.4-15.fc40.noarch R-rpm-macros-1.2.1-9.fc40.noarch R-snow-0.4.4-15.fc40.noarch abattis-cantarell-vf-fonts-0.301-12.fc40.noarch alsa-lib-1.2.11-2.fc40.x86_64 annobin-docs-12.51-1.fc41.noarch annobin-plugin-gcc-12.51-1.fc41.x86_64 autoconf-2.72-2.fc41.noarch automake-1.16.5-16.fc40.noarch avahi-libs-0.8-26.fc40.x86_64 brotli-1.1.0-3.fc40.x86_64 brotli-devel-1.1.0-3.fc40.x86_64 bzip2-devel-1.0.8-18.fc40.x86_64 cairo-1.18.0-3.fc40.x86_64 cairo-devel-1.18.0-3.fc40.x86_64 cmake-filesystem-3.28.3-4.fc41.x86_64 copy-jdk-configs-4.1-5.fc40.noarch cpp-14.0.1-0.15.fc41.x86_64 crypto-policies-scripts-20240320-1.git58e3d95.fc41.noarch cups-libs-1:2.4.7-13.fc41.x86_64 dbus-libs-1:1.14.10-3.fc40.x86_64 default-fonts-core-sans-4.0-12.fc40.noarch desktop-file-utils-0.26-12.fc40.x86_64 emacs-filesystem-1:30.0-2.fc41.noarch expat-2.6.2-1.fc41.x86_64 flexiblas-3.4.2-1.fc41.x86_64 flexiblas-devel-3.4.2-1.fc41.x86_64 flexiblas-netlib-3.4.2-1.fc41.x86_64 flexiblas-netlib64-3.4.2-1.fc41.x86_64 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lua-5.4.6-5.fc40.x86_64 lua-posix-36.2.1-6.fc40.x86_64 m4-1.4.19-9.fc40.x86_64 make-1:4.4.1-6.fc40.x86_64 mkfontscale-1.2.2-6.fc40.x86_64 mpdecimal-2.5.1-9.fc40.x86_64 ncurses-6.4-12.20240127.fc40.x86_64 nettle-3.9.1-6.fc40.x86_64 nspr-4.35.0-22.fc41.x86_64 nss-3.99.0-1.fc41.x86_64 nss-softokn-3.99.0-1.fc41.x86_64 nss-softokn-freebl-3.99.0-1.fc41.x86_64 nss-sysinit-3.99.0-1.fc41.x86_64 nss-util-3.99.0-1.fc41.x86_64 openblas-0.3.26-4.fc40.x86_64 openblas-openmp-0.3.26-4.fc40.x86_64 openblas-openmp64-0.3.26-4.fc40.x86_64 pango-1.52.2-1.fc41.x86_64 pcre2-devel-10.43-1.fc41.x86_64 pcre2-utf16-10.43-1.fc41.x86_64 pcre2-utf32-10.43-1.fc41.x86_64 perl-AutoLoader-5.74-507.fc41.noarch perl-B-1.88-507.fc41.x86_64 perl-Carp-1.54-502.fc40.noarch perl-Class-Struct-0.68-507.fc41.noarch perl-Data-Dumper-2.188-503.fc40.x86_64 perl-Digest-1.20-502.fc40.noarch perl-Digest-MD5-2.59-3.fc40.x86_64 perl-DynaLoader-1.54-507.fc41.x86_64 perl-Encode-4:3.21-505.fc41.x86_64 perl-Errno-1.37-507.fc41.x86_64 perl-Exporter-5.78-3.fc40.noarch perl-Fcntl-1.15-507.fc41.x86_64 perl-File-Basename-2.86-507.fc41.noarch perl-File-Compare-1.100.700-507.fc41.noarch perl-File-Copy-2.41-507.fc41.noarch perl-File-Find-1.43-507.fc41.noarch perl-File-Path-2.18-503.fc40.noarch perl-File-Temp-1:0.231.100-503.fc40.noarch perl-File-stat-1.13-507.fc41.noarch perl-FileHandle-2.05-507.fc41.noarch perl-Getopt-Long-1:2.57-3.fc40.noarch perl-Getopt-Std-1.13-507.fc41.noarch perl-HTTP-Tiny-0.088-5.fc40.noarch perl-IO-1.52-507.fc41.x86_64 perl-IO-Socket-IP-0.42-2.fc40.noarch perl-IO-Socket-SSL-2.085-1.fc40.noarch perl-IPC-Open3-1.22-507.fc41.noarch perl-MIME-Base64-3.16-503.fc40.x86_64 perl-Mozilla-CA-20240313-1.fc41.noarch perl-Net-SSLeay-1.94-3.fc40.x86_64 perl-POSIX-2.13-507.fc41.x86_64 perl-PathTools-3.89-502.fc40.x86_64 perl-Pod-Escapes-1:1.07-503.fc40.noarch perl-Pod-Perldoc-3.28.01-503.fc40.noarch perl-Pod-Simple-1:3.45-6.fc40.noarch perl-Pod-Usage-4:2.03-503.fc40.noarch perl-Scalar-List-Utils-5:1.63-503.fc40.x86_64 perl-SelectSaver-1.02-507.fc41.noarch perl-Socket-4:2.038-1.fc41.x86_64 perl-Storable-1:3.32-502.fc40.x86_64 perl-Symbol-1.09-507.fc41.noarch perl-Term-ANSIColor-5.01-504.fc40.noarch perl-Term-Cap-1.18-503.fc40.noarch perl-Text-ParseWords-3.31-502.fc40.noarch perl-Text-Tabs+Wrap-2024.001-1.fc41.noarch perl-Thread-Queue-3.14-503.fc40.noarch perl-Time-Local-2:1.350-5.fc40.noarch perl-URI-5.28-1.fc41.noarch perl-base-2.27-507.fc41.noarch perl-constant-1.33-503.fc40.noarch perl-if-0.61.000-507.fc41.noarch perl-interpreter-4:5.38.2-507.fc41.x86_64 perl-libnet-3.15-503.fc40.noarch perl-libs-4:5.38.2-507.fc41.x86_64 perl-locale-1.10-507.fc41.noarch perl-mro-1.28-507.fc41.x86_64 perl-overload-1.37-507.fc41.noarch perl-overloading-0.02-507.fc41.noarch perl-parent-1:0.241-502.fc40.noarch perl-podlators-1:5.01-502.fc40.noarch perl-threads-1:2.36-503.fc40.x86_64 perl-threads-shared-1.68-502.fc40.x86_64 perl-vars-1.05-507.fc41.noarch pixman-0.43.4-1.fc41.x86_64 pixman-devel-0.43.4-1.fc41.x86_64 python-pip-wheel-24.0-2.fc41.noarch python3-3.12.3-2.fc41.x86_64 python3-libs-3.12.3-2.fc41.x86_64 python3-packaging-24.0-1.fc41.noarch sysprof-capture-devel-46.0-1.fc41.x86_64 tcl-1:8.6.14-1.fc41.x86_64 tcl-devel-1:8.6.14-1.fc41.x86_64 tk-1:8.6.14-1.fc41.x86_64 tk-devel-1:8.6.14-1.fc41.x86_64 tre-0.8.0-43.20140228gitc2f5d13.fc40.x86_64 tre-common-0.8.0-43.20140228gitc2f5d13.fc40.noarch tre-devel-0.8.0-43.20140228gitc2f5d13.fc40.x86_64 ttmkfdir-3.0.9-70.fc40.x86_64 tzdata-2024a-5.fc41.noarch tzdata-java-2024a-5.fc41.noarch xdg-utils-1.2.1-1.fc41.noarch xml-common-0.6.3-63.fc40.noarch xorg-x11-fonts-Type1-7.5-38.fc40.noarch xorg-x11-proto-devel-2024.1-1.fc41.noarch xz-devel-1:5.4.6-3.fc41.x86_64 zlib-ng-compat-devel-2.1.6-2.fc40.x86_64 Complete! Finish: build setup for R-BiocParallel-1.30.3-7.fc41.src.rpm Start: rpmbuild R-BiocParallel-1.30.3-7.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1714003200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.lt8Gtv + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf BiocParallel + /usr/bin/mkdir -p BiocParallel + cd BiocParallel + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BiocParallel_1.30.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/BiocParallel-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/BiocParallel-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + chmod -x BiocParallel/inst/snow/RMPInode.R + pushd BiocParallel ~/build/BUILD/BiocParallel/BiocParallel ~/build/BUILD/BiocParallel + autoreconf -ifv autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force autoreconf: configure.ac: tracing autoreconf: configure.ac: not using Libtool autoreconf: configure.ac: not using Intltool autoreconf: configure.ac: not using Gtkdoc autoreconf: running: /usr/bin/autoconf --force autoreconf: configure.ac: not using Autoheader autoreconf: configure.ac: not using Automake autoreconf: Leaving directory '.' + popd ~/build/BUILD/BiocParallel + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.2IJIBu + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BiocParallel + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.3AYX0T + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-BiocParallel-1.30.3-7.fc41.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-BiocParallel-1.30.3-7.fc41.x86_64 ++ dirname /builddir/build/BUILDROOT/R-BiocParallel-1.30.3-7.fc41.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-BiocParallel-1.30.3-7.fc41.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BiocParallel + mkdir -p /builddir/build/BUILDROOT/R-BiocParallel-1.30.3-7.fc41.x86_64/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-BiocParallel-1.30.3-7.fc41.x86_64/usr/lib64/R/library BiocParallel * installing *source* package ‘BiocParallel’ ... ** using staged installation checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking for shm_open in -lrt... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++ (GCC) 14.0.1 20240411 (Red Hat 14.0.1-0)’ using C++11 g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I'/usr/share/R/library/BH/include' -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ipcmutex.cpp -o ipcmutex.o In file included from /usr/share/R/library/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /usr/share/R/library/BH/include/boost/mpl/arg.hpp:25, from /usr/share/R/library/BH/include/boost/mpl/placeholders.hpp:24, from /usr/share/R/library/BH/include/boost/mpl/apply.hpp:24, from /usr/share/R/library/BH/include/boost/mpl/aux_/fold_impl.hpp:19, from /usr/share/R/library/BH/include/boost/mpl/fold.hpp:20, from /usr/share/R/library/BH/include/boost/mpl/remove_if.hpp:18, from /usr/share/R/library/BH/include/boost/mpl/remove.hpp:18, from /usr/share/R/library/BH/include/boost/function_types/components.hpp:44, from /usr/share/R/library/BH/include/boost/function_types/is_member_function_pointer.hpp:14, from /usr/share/R/library/BH/include/boost/tti/detail/dmem_fun.hpp:10, from /usr/share/R/library/BH/include/boost/tti/has_member_function.hpp:15, from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:20, from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, from ipcmutex.cpp:3: /usr/share/R/library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /usr/share/R/library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /usr/share/R/library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /usr/share/R/library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - g++ -std=gnu++11 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o BiocParallel.so ipcmutex.o -lrt -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-BiocParallel-1.30.3-7.fc41.x86_64/usr/lib64/R/library/00LOCK-BiocParallel/00new/BiocParallel/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘BiocParallel’ finding HTML links ... done BatchJobsParam-class html BatchtoolsParam-class html BiocParallel-package html BiocParallelParam-class html DeveloperInterface html DoparParam-class html MulticoreParam-class html SerialParam-class html SnowParam-class html bpaggregate html bpiterate html bplapply html bploop html bpmapply html bpok html bpoptions html bpschedule html bptry html bpvalidate html bpvec html bpvectorize html ipcmutex html register html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocParallel) + test -d BiocParallel/src + cd BiocParallel/src + rm -f ipcmutex.o BiocParallel.so + rm -rf /builddir/build/BUILDROOT/R-BiocParallel-1.30.3-7.fc41.x86_64/usr/lib64/R/library/R.css + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 1.30.3-7.fc41 --unique-debug-suffix -1.30.3-7.fc41.x86_64 --unique-debug-src-base R-BiocParallel-1.30.3-7.fc41.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/BiocParallel find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-BiocParallel-1.30.3-7.fc41.x86_64 9 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/lib64/R/library/BiocParallel/RSOCKnode.sh from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/lib64/R/library/BiocParallel/RMPInode.sh from /bin/sh to #!/usr/bin/sh + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.a4kB2Z + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BiocParallel + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-BiocParallel-1.30.3-7.fc41.x86_64 Provides: R(BiocParallel) = 1.30.3 R-BiocParallel = 1.30.3-7.fc41 R-BiocParallel(x86-64) = 1.30.3-7.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/sh R(ABI) = 4.4 R(codetools) R(futile.logger) R(methods) R(parallel) R(snow) R(stats) R(utils) R-core >= 3.5.0 libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.25)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) rtld(GNU_HASH) Suggests: R(BiocGenerics) R(GenomicAlignments) R(GenomicRanges) R(RUnit) R(Rsamtools) R(data.table) R(doParallel) R(foreach) R(knitr) R(tools) Processing files: R-BiocParallel-debugsource-1.30.3-7.fc41.x86_64 Provides: R-BiocParallel-debugsource = 1.30.3-7.fc41 R-BiocParallel-debugsource(x86-64) = 1.30.3-7.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-BiocParallel-debuginfo-1.30.3-7.fc41.x86_64 Provides: R-BiocParallel-debuginfo = 1.30.3-7.fc41 R-BiocParallel-debuginfo(x86-64) = 1.30.3-7.fc41 debuginfo(build-id) = 09d570111d63117e8c9d25e7b29ba412b99ce775 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-BiocParallel-debugsource(x86-64) = 1.30.3-7.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-BiocParallel-1.30.3-7.fc41.x86_64 Wrote: /builddir/build/RPMS/R-BiocParallel-debugsource-1.30.3-7.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/R-BiocParallel-1.30.3-7.fc41.x86_64.rpm Wrote: /builddir/build/RPMS/R-BiocParallel-debuginfo-1.30.3-7.fc41.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.di49qX + umask 022 + cd /builddir/build/BUILD + cd BiocParallel + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-BiocParallel-1.30.3-7.fc41.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.0TFPa6 + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/BiocParallel-SPECPARTS + rm -rf BiocParallel BiocParallel.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild R-BiocParallel-1.30.3-7.fc41.src.rpm Finish: build phase for R-BiocParallel-1.30.3-7.fc41.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1714051725.099111/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1714051725.099111/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1714051725.099111/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/R-BiocParallel-1.30.3-7.fc41.src.rpm) Config(child) 0 minutes 36 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-BiocParallel", "epoch": null, "version": "1.30.3", "release": "7.fc41", "arch": "src" }, { "name": "R-BiocParallel-debugsource", "epoch": null, "version": "1.30.3", "release": "7.fc41", "arch": "x86_64" }, { "name": "R-BiocParallel-debuginfo", "epoch": null, "version": "1.30.3", "release": "7.fc41", "arch": "x86_64" }, { "name": "R-BiocParallel", "epoch": null, "version": "1.30.3", "release": "7.fc41", "arch": "x86_64" } ] } RPMResults finished