Warning: Permanently added '34.227.162.110' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/7565376-fedora-40-aarch64 --chroot fedora-40-aarch64 Version: 0.73 PID: 12363 Logging PID: 12364 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 7565376, 'buildroot_pkgs': [], 'chroot': 'fedora-40-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': '004510c515bcba2c418794bab1ca845d6d55fa80', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/moose', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'moose', 'package_version': '3.1.5-21', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-40-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/churchyard', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'submitter': 'https://src.fedoraproject.org/user/churchyard', 'tags': [], 'task_id': '7565376-fedora-40-aarch64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/moose /var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/moose', '/var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose'... Running: git checkout 004510c515bcba2c418794bab1ca845d6d55fa80 -- cmd: ['git', 'checkout', '004510c515bcba2c418794bab1ca845d6d55fa80', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose rc: 0 stdout: stderr: Note: switching to '004510c515bcba2c418794bab1ca845d6d55fa80'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 004510c automatic import of moose Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading moose-core-3.1.5.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o moose-core-3.1.5.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/moose/moose-core-3.1.5.tar.gz/md5/b5f0b53b46ef45d55caf4cdae3dbd256/moose-core-3.1.5.tar.gz /usr/bin/tail: % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed /var/lib/copr-rpmbuild/main.log: file truncated 100 2721k 100 2721k 0 0 82.5M 0 --:--:-- --:--:-- --:--:-- 83.0M INFO: Reading stdout from command: md5sum moose-core-3.1.5.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose/moose.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1717834157.279534 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose/moose.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1717834157.279534 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose/moose.spec) Config(fedora-40-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.6 INFO: Mock Version: 5.6 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-aarch64-bootstrap-1717834157.279534/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:40 INFO: Pulling image: registry.fedoraproject.org/fedora:40 INFO: Copy content of container registry.fedoraproject.org/fedora:40 to /var/lib/mock/fedora-40-aarch64-bootstrap-1717834157.279534/root INFO: Checking that registry.fedoraproject.org/fedora:40 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:40 with podman image mount INFO: image registry.fedoraproject.org/fedora:40 as /var/lib/containers/storage/overlay/2965a0124afd23d908d3dc9366574723a916a65b0a2dff333c1d26461c15dd99/merged INFO: umounting image registry.fedoraproject.org/fedora:40 (/var/lib/containers/storage/overlay/2965a0124afd23d908d3dc9366574723a916a65b0a2dff333c1d26461c15dd99/merged) with podman image umount INFO: Using 'dnf' instead of 'dnf5' for bootstrap chroot INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf5 tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 45 MB/s | 3.3 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 57 MB/s | 17 MB 00:00 fedora 27 MB/s | 19 MB 00:00 updates 31 MB/s | 6.9 MB 00:00 Last metadata expiration check: 0:00:01 ago on Sat Jun 8 08:09:27 2024. Dependencies resolved. ============================================================================================================ Package Arch Version Repository Size ============================================================================================================ Installing: dnf5 aarch64 5.2.3.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 643 k replacing dnf.noarch 4.19.2-1.fc40 replacing yum.noarch 4.19.2-1.fc40 dnf5-plugins aarch64 5.2.3.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 336 k Upgrading: dnf-data noarch 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k python3-dnf noarch 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 580 k Installing dependencies: fmt aarch64 10.2.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 121 k libdnf5 aarch64 5.2.3.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 977 k libdnf5-cli aarch64 5.2.3.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 288 k sdbus-cpp aarch64 1.5.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 103 k Transaction Summary ============================================================================================================ Install 6 Packages Upgrade 2 Packages Total download size: 3.0 M Downloading Packages: (1/8): dnf5-plugins-5.2.3.0-1.fc41.aarch64.rpm 3.5 MB/s | 336 kB 00:00 (2/8): fmt-10.2.1-4.fc41.aarch64.rpm 1.0 MB/s | 121 kB 00:00 (3/8): dnf5-5.2.3.0-1.fc41.aarch64.rpm 5.0 MB/s | 643 kB 00:00 (4/8): libdnf5-cli-5.2.3.0-1.fc41.aarch64.rpm 7.2 MB/s | 288 kB 00:00 (5/8): sdbus-cpp-1.5.0-2.fc41.aarch64.rpm 2.2 MB/s | 103 kB 00:00 (6/8): dnf-data-4.20.0-1.fc41.noarch.rpm 1.3 MB/s | 39 kB 00:00 (7/8): libdnf5-5.2.3.0-1.fc41.aarch64.rpm 9.0 MB/s | 977 kB 00:00 (8/8): python3-dnf-4.20.0-1.fc41.noarch.rpm 12 MB/s | 580 kB 00:00 -------------------------------------------------------------------------------- Total 14 MB/s | 3.0 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : fmt-10.2.1-4.fc41.aarch64 1/12 Installing : libdnf5-5.2.3.0-1.fc41.aarch64 2/12 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : libdnf5-cli-5.2.3.0-1.fc41.aarch64 3/12 Installing : sdbus-cpp-1.5.0-2.fc41.aarch64 4/12 Installing : dnf5-5.2.3.0-1.fc41.aarch64 5/12 Upgrading : dnf-data-4.20.0-1.fc41.noarch 6/12 Upgrading : python3-dnf-4.20.0-1.fc41.noarch 7/12 Installing : dnf5-plugins-5.2.3.0-1.fc41.aarch64 8/12 Obsoleting : yum-4.19.2-1.fc40.noarch 9/12 Running scriptlet: dnf-4.19.2-1.fc40.noarch 10/12 Obsoleting : dnf-4.19.2-1.fc40.noarch 10/12 warning: directory /var/cache/dnf: remove failed: Device or resource busy Running scriptlet: dnf-4.19.2-1.fc40.noarch 10/12 Cleanup : python3-dnf-4.19.2-1.fc40.noarch 11/12 Cleanup : dnf-data-4.19.2-1.fc40.noarch 12/12 Running scriptlet: dnf-data-4.19.2-1.fc40.noarch 12/12 Upgraded: dnf-data-4.20.0-1.fc41.noarch python3-dnf-4.20.0-1.fc41.noarch Installed: dnf5-5.2.3.0-1.fc41.aarch64 dnf5-plugins-5.2.3.0-1.fc41.aarch64 fmt-10.2.1-4.fc41.aarch64 libdnf5-5.2.3.0-1.fc41.aarch64 libdnf5-cli-5.2.3.0-1.fc41.aarch64 sdbus-cpp-1.5.0-2.fc41.aarch64 Complete! INFO: Switching package manager from dnf to the dnf5 (direct choice) Finish(bootstrap): installing dnf5 tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-aarch64-1717834157.279534/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc40.aarch64 rpm-sequoia-1.6.0-3.fc40.aarch64 python3-dnf-4.20.0-1.fc41.noarch dnf5-5.2.3.0-1.fc41.aarch64 dnf5-plugins-5.2.3.0-1.fc41.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 224.1 KiB/s | 17.5 KiB | 00m00s fedora 100% | 277.8 KiB/s | 18.6 KiB | 00m00s Copr repository 100% | 109.8 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 55.7 KiB/s | 4.1 KiB | 00m00s Copr repository 100% | 78.1 MiB/s | 3.3 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 5.2.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.3 MiB bzip2 aarch64 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 427.5 KiB coreutils aarch64 9.5-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.8 MiB cpio aarch64 2.15-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB diffutils aarch64 3.10-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 MiB fedora-release-common noarch 41-0.13 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 19.2 KiB findutils aarch64 1:4.10.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 MiB gawk aarch64 5.3.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.2 MiB glibc-minimal-langpack aarch64 2.39.9000-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B grep aarch64 3.11-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB gzip aarch64 1.13-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 488.8 KiB info aarch64 7.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 613.5 KiB patch aarch64 2.7.6-24.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 390.5 KiB redhat-rpm-config noarch 292-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 183.5 KiB rpm-build aarch64 4.19.91-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB sed aarch64 4.9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB shadow-utils aarch64 2:4.15.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.3 MiB tar aarch64 2:1.35-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB unzip aarch64 6.0-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 726.4 KiB util-linux aarch64 2.40.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 17.5 MiB which aarch64 2.21-41.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 248.1 KiB xz aarch64 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB Installing dependencies: add-determinism-nopython aarch64 0.2.0-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB alternatives aarch64 1.27-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.2 KiB ansible-srpm-macros noarch 1-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.7 KiB audit-libs aarch64 4.0.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 547.2 KiB authselect aarch64 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 309.4 KiB authselect-libs aarch64 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 931.8 KiB basesystem noarch 11-20.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B binutils aarch64 2.42.50-14.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 33.1 MiB build-reproducibility-srpm-macros noarch 0.2.0-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 769.0 B bzip2-libs aarch64 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 200.7 KiB ca-certificates noarch 2023.2.62_v7.0.401-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB coreutils-common aarch64 9.5-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.2 MiB cracklib aarch64 2.9.11-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 934.6 KiB crypto-policies noarch 20240521-1.gitf71d135.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 120.0 KiB curl aarch64 8.8.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 871.7 KiB cyrus-sasl-lib aarch64 2.1.28-22.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB debugedit aarch64 5.0-16.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 499.0 KiB dwz aarch64 0.15-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 386.7 KiB ed aarch64 1.20.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 282.7 KiB efi-srpm-macros noarch 5-11.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.1 KiB elfutils aarch64 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.0 MiB elfutils-debuginfod-client aarch64 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 396.7 KiB elfutils-default-yama-scope noarch 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 KiB elfutils-libelf aarch64 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 MiB elfutils-libs aarch64 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB fedora-gpg-keys noarch 41-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 124.7 KiB fedora-release noarch 41-0.13 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B fedora-release-identity-basic noarch 41-0.13 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 694.0 B fedora-repos noarch 41-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.9 KiB fedora-repos-rawhide noarch 41-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 KiB file aarch64 5.45-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 267.4 KiB file-libs aarch64 5.45-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.0 MiB filesystem aarch64 3.18-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106.0 B fonts-srpm-macros noarch 1:2.0.5-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 55.3 KiB forge-srpm-macros noarch 0.3.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39.0 KiB fpc-srpm-macros noarch 1.3-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.0 B gdb-minimal aarch64 14.2-10.fc41 copr_base 12.7 MiB gdbm aarch64 1:1.23-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 928.2 KiB gdbm-libs aarch64 1:1.23-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 425.8 KiB ghc-srpm-macros noarch 1.9.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 747.0 B glibc aarch64 2.39.9000-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.8 MiB glibc-common aarch64 2.39.9000-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.6 MiB glibc-gconv-extra aarch64 2.39.9000-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 49.0 MiB gmp aarch64 1:6.3.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 721.9 KiB gnat-srpm-macros noarch 6-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 KiB go-srpm-macros noarch 3.6.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 60.8 KiB jansson aarch64 2.13.1-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 220.4 KiB kernel-srpm-macros noarch 1.0-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB keyutils-libs aarch64 1.6.3-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 226.3 KiB krb5-libs aarch64 1.21.2-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.4 MiB libacl aarch64 2.3.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 196.0 KiB libarchive aarch64 3.7.4-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB libattr aarch64 2.5.2-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 196.5 KiB libblkid aarch64 2.40.1-1.fc41 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265.1 KiB libsemanage aarch64 3.6-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 361.4 KiB libsepol aarch64 3.6-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 874.0 KiB libsmartcols aarch64 2.40.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 288.4 KiB libssh aarch64 0.10.6-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 581.2 KiB libssh-config noarch 0.10.6-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 277.0 B libstdc++ aarch64 14.1.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.8 MiB libtasn1 aarch64 4.19.0-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 283.7 KiB libtirpc aarch64 1.3.4-1.rc3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 274.6 KiB libtool-ltdl aarch64 2.4.7-11.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 222.1 KiB libunistring aarch64 1.1-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB libutempter aarch64 1.2.1-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 417.6 KiB libuuid aarch64 2.40.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 197.4 KiB libverto aarch64 0.3.2-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 197.4 KiB libxcrypt aarch64 4.4.36-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 398.9 KiB libxml2 aarch64 2.12.7-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB libzstd aarch64 1.5.6-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 795.9 KiB lua-libs aarch64 5.4.6-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 393.0 KiB lua-srpm-macros noarch 1-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 KiB lz4-libs aarch64 1.9.4-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 261.4 KiB mpfr aarch64 4.2.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 818.8 KiB ncurses-base noarch 6.4-12.20240127.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.2 KiB ncurses-libs aarch64 6.4-12.20240127.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB ocaml-srpm-macros noarch 10-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-17.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B openldap aarch64 2.6.8-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB openssl-libs aarch64 1:3.2.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.8 MiB p11-kit aarch64 0.25.3-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.8 MiB p11-kit-trust aarch64 0.25.3-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 655.4 KiB package-notes-srpm-macros noarch 0.5-11.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam aarch64 1.6.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.0 MiB pam-libs aarch64 1.6.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 607.0 KiB pcre2 aarch64 10.43-2.fc41.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 905.3 KiB pcre2-syntax noarch 10.43-2.fc41.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 249.0 KiB perl-srpm-macros noarch 1-53.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf aarch64 2.1.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 238.7 KiB pkgconf-m4 noarch 2.1.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13.9 KiB pkgconf-pkg-config aarch64 2.1.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 990.0 B popt aarch64 1.19-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 272.8 KiB publicsuffix-list-dafsa noarch 20240107-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.12.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 KiB python-srpm-macros noarch 3.12-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 50.5 KiB qt5-srpm-macros noarch 5.15.14-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.7.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline aarch64 8.2-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 689.1 KiB rpm aarch64 4.19.91-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.9 MiB rpm-build-libs aarch64 4.19.91-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 262.6 KiB rpm-libs aarch64 4.19.91-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.8 KiB rpm-sequoia aarch64 1.6.0-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 MiB rust-srpm-macros noarch 26.3-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB sqlite-libs aarch64 3.46.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB systemd-libs aarch64 256~rc4-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.6 MiB util-linux-core aarch64 2.40.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.2 MiB xxhash-libs aarch64 0.8.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 212.2 KiB xz-libs aarch64 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 265.6 KiB zig-srpm-macros noarch 1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip aarch64 3.0-40.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB zlib-ng-compat aarch64 2.1.6-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 261.7 KiB zstd aarch64 1.5.6-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 52 MiB. Need to download 0 B. After this operation 306 MiB will be used (install 306 MiB, remove 0 B). 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Installing libfdisk-0:2.40.1- 100% | 236.2 MiB/s | 483.8 KiB | 00m00s [ 78/156] Installing add-determinism-no 100% | 325.7 MiB/s | 2.3 MiB | 00m00s [ 79/156] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 80/156] Installing libxml2-0:2.12.7-1 100% | 314.8 MiB/s | 2.2 MiB | 00m00s [ 81/156] Installing bzip2-0:1.0.8-18.f 100% | 210.9 MiB/s | 432.0 KiB | 00m00s [ 82/156] Installing sqlite-libs-0:3.46 100% | 270.2 MiB/s | 1.6 MiB | 00m00s [ 83/156] Installing ed-0:1.20.2-1.fc41 100% | 139.2 MiB/s | 285.0 KiB | 00m00s [ 84/156] Installing patch-0:2.7.6-24.f 100% | 191.4 MiB/s | 392.0 KiB | 00m00s [ 85/156] Installing elfutils-default-y 100% | 291.9 KiB/s | 2.0 KiB | 00m00s >>> Running post-install scriptlet: elfutils-default-yama-scope-0:0.191-7.fc41.n >>> Stop post-install scriptlet: elfutils-default-yama-scope-0:0.191-7.fc41.noar [ 86/156] Installing cpio-0:2.15-1.fc40 100% | 174.4 MiB/s | 1.2 MiB | 00m00s [ 87/156] Installing diffutils-0:3.10-5 100% | 234.3 MiB/s | 2.1 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| 208.6 MiB/s | 213.6 KiB | 00m00s [ 99/156] Installing libbrotli-0:1.1.0- 100% | 228.1 MiB/s | 1.1 MiB | 00m00s [100/156] Installing libtool-ltdl-0:2.4 100% | 218.0 MiB/s | 223.3 KiB | 00m00s [101/156] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [102/156] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [103/156] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [104/156] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [105/156] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [106/156] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [107/156] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [108/156] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [109/156] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [110/156] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [111/156] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [112/156] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [113/156] Installing pkgconf-m4-0:2.1.1 100% | 0.0 B/s | 14.3 KiB | 00m00s [114/156] Installing pkgconf-pkg-config 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [115/156] Installing coreutils-common-0 100% | 279.8 MiB/s | 11.2 MiB | 00m00s [116/156] Installing openssl-libs-1:3.2 100% | 323.9 MiB/s | 7.8 MiB | 00m00s [117/156] Installing coreutils-0:9.5-2. 100% | 442.4 MiB/s | 20.8 MiB | 00m00s >>> Running pre-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40.n >>> Stop pre-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40.noar [118/156] Installing ca-certificates-0: 100% | 2.4 MiB/s | 2.3 MiB | 00m01s >>> Running post-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40. >>> Stop post-install scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40.noa [119/156] Installing krb5-libs-0:1.21.2 100% | 262.0 MiB/s | 3.4 MiB | 00m00s [120/156] Installing libarchive-0:3.7.4 100% | 254.0 MiB/s | 1.0 MiB | 00m00s [121/156] Installing libtirpc-0:1.3.4-1 100% | 135.0 MiB/s | 276.4 KiB | 00m00s [122/156] Installing gzip-0:1.13-1.fc40 100% | 160.9 MiB/s | 494.3 KiB | 00m00s [123/156] Installing authselect-libs-0: 100% | 115.6 MiB/s | 946.7 KiB | 00m00s [124/156] Installing authselect-0:1.5.0 100% | 102.1 MiB/s | 313.8 KiB | 00m00s [125/156] Installing cracklib-0:2.9.11- 100% | 154.0 MiB/s | 946.0 KiB | 00m00s [126/156] Installing libpwquality-0:1.4 100% | 158.2 MiB/s | 1.1 MiB | 00m00s [127/156] Installing libnsl2-0:2.0.1-1. 100% | 108.9 MiB/s | 223.0 KiB | 00m00s [128/156] Installing pam-0:1.6.1-3.fc41 100% | 355.9 MiB/s | 11.0 MiB | 00m00s [129/156] Installing libssh-0:0.10.6-6. 100% | 189.9 MiB/s | 583.3 KiB | 00m00s [130/156] Installing rpm-sequoia-0:1.6. 100% | 300.7 MiB/s | 2.1 MiB | 00m00s [131/156] Installing rpm-libs-0:4.19.91 100% | 281.0 MiB/s | 863.3 KiB | 00m00s [132/156] Installing libevent-0:2.1.12- 100% | 304.6 MiB/s | 1.5 MiB | 00m00s [133/156] Installing openldap-0:2.6.8-1 100% | 249.0 MiB/s | 1.0 MiB | 00m00s [134/156] Installing libcurl-0:8.8.0-1. 100% | 225.3 MiB/s | 922.6 KiB | 00m00s [135/156] Installing elfutils-libs-0:0. 100% | 245.1 MiB/s | 1.0 MiB | 00m00s [136/156] Installing elfutils-debuginfo 100% | 194.7 MiB/s | 398.7 KiB | 00m00s [137/156] Installing elfutils-0:0.191-7 100% | 385.8 MiB/s | 5.0 MiB | 00m00s [138/156] Installing binutils-0:2.42.50 100% | 334.9 MiB/s | 33.2 MiB | 00m00s >>> Running post-install scriptlet: binutils-0:2.42.50-14.fc41.aarch64 >>> Stop post-install scriptlet: binutils-0:2.42.50-14.fc41.aarch64 [139/156] Installing gdb-minimal-0:14.2 100% | 302.8 MiB/s | 12.7 MiB | 00m00s [140/156] Installing debugedit-0:5.0-16 100% | 245.0 MiB/s | 501.8 KiB | 00m00s [141/156] Installing rpm-build-libs-0:4 100% | 257.3 MiB/s | 263.5 KiB | 00m00s [142/156] Installing curl-0:8.8.0-1.fc4 100% | 65.7 MiB/s | 874.2 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.19.91-8.fc41.aarch64 >>> Stop pre-install scriptlet: rpm-0:4.19.91-8.fc41.aarch64 [143/156] Installing rpm-0:4.19.91-8.fc 100% | 139.6 MiB/s | 3.3 MiB | 00m00s [144/156] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [145/156] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [146/156] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [147/156] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.3 KiB | 00m00s [148/156] Installing fonts-srpm-macros- 100% | 55.1 MiB/s | 56.5 KiB | 00m00s [149/156] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [150/156] Installing python-srpm-macros 100% | 50.5 MiB/s | 51.7 KiB | 00m00s [151/156] Installing redhat-rpm-config- 100% | 61.9 MiB/s | 190.0 KiB | 00m00s [152/156] Installing rpm-build-0:4.19.9 100% | 279.2 MiB/s | 1.4 MiB | 00m00s [153/156] Installing pyproject-srpm-mac 100% | 2.0 MiB/s | 2.1 KiB | 00m00s [154/156] Installing util-linux-0:2.40. 100% | 350.6 MiB/s | 17.5 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40.1-1.fc41.aarch64 >>> Stop post-install scriptlet: util-linux-0:2.40.1-1.fc41.aarch64 [155/156] Installing which-0:2.21-41.fc 100% | 122.2 MiB/s | 250.3 KiB | 00m00s [156/156] Installing info-0:7.1-2.fc40. 100% | 484.1 KiB/s | 613.9 KiB | 00m01s >>> Running post-transaction scriptlet: filesystem-0:3.18-9.fc41.aarch64 >>> Stop post-transaction scriptlet: filesystem-0:3.18-9.fc41.aarch64 >>> Running post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.f >>> Stop post-transaction scriptlet: ca-certificates-0:2023.2.62_v7.0.401-6.fc40 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc41.aarch64 >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-5.fc41.aarch64 >>> Running post-transaction scriptlet: rpm-0:4.19.91-8.fc41.aarch64 >>> Stop post-transaction scriptlet: rpm-0:4.19.91-8.fc41.aarch64 >>> Running trigger-install scriptlet: glibc-common-0:2.39.9000-18.fc41.aarch64 >>> Stop trigger-install scriptlet: glibc-common-0:2.39.9000-18.fc41.aarch64 >>> Running trigger-install scriptlet: info-0:7.1-2.fc40.aarch64 >>> Stop trigger-install scriptlet: info-0:7.1-2.fc40.aarch64 Warning: skipped PGP checks for 154 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-nopython-0.2.0-9.fc41.aarch64 alternatives-1.27-1.fc41.aarch64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-2.fc41.aarch64 authselect-1.5.0-5.fc41.aarch64 authselect-libs-1.5.0-5.fc41.aarch64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.aarch64 binutils-2.42.50-14.fc41.aarch64 build-reproducibility-srpm-macros-0.2.0-9.fc41.noarch bzip2-1.0.8-18.fc40.aarch64 bzip2-libs-1.0.8-18.fc40.aarch64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-2.fc41.aarch64 coreutils-common-9.5-2.fc41.aarch64 cpio-2.15-1.fc40.aarch64 cracklib-2.9.11-5.fc40.aarch64 crypto-policies-20240521-1.gitf71d135.fc41.noarch curl-8.8.0-1.fc41.aarch64 cyrus-sasl-lib-2.1.28-22.fc41.aarch64 debugedit-5.0-16.fc41.aarch64 diffutils-3.10-5.fc40.aarch64 dwz-0.15-6.fc40.aarch64 ed-1.20.2-1.fc41.aarch64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.aarch64 elfutils-debuginfod-client-0.191-7.fc41.aarch64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.aarch64 elfutils-libs-0.191-7.fc41.aarch64 fedora-gpg-keys-41-0.2.noarch fedora-release-41-0.13.noarch fedora-release-common-41-0.13.noarch fedora-release-identity-basic-41-0.13.noarch fedora-repos-41-0.2.noarch fedora-repos-rawhide-41-0.2.noarch file-5.45-5.fc41.aarch64 file-libs-5.45-5.fc41.aarch64 filesystem-3.18-9.fc41.aarch64 findutils-4.10.0-2.fc41.aarch64 fonts-srpm-macros-2.0.5-15.fc41.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.aarch64 gdb-minimal-14.2-10.fc41.aarch64 gdbm-1.23-6.fc40.aarch64 gdbm-libs-1.23-6.fc40.aarch64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-18.fc41.aarch64 glibc-common-2.39.9000-18.fc41.aarch64 glibc-gconv-extra-2.39.9000-18.fc41.aarch64 glibc-minimal-langpack-2.39.9000-18.fc41.aarch64 gmp-6.3.0-1.fc41.aarch64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-8.fc41.aarch64 gzip-1.13-1.fc40.aarch64 info-7.1-2.fc40.aarch64 jansson-2.13.1-9.fc40.aarch64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.aarch64 krb5-libs-1.21.2-5.fc40.aarch64 libacl-2.3.2-1.fc40.aarch64 libarchive-3.7.4-1.fc41.aarch64 libattr-2.5.2-3.fc40.aarch64 libblkid-2.40.1-1.fc41.aarch64 libbrotli-1.1.0-3.fc40.aarch64 libcap-2.70-1.fc41.aarch64 libcap-ng-0.8.5-1.fc41.aarch64 libcom_err-1.47.0-5.fc40.aarch64 libcurl-8.8.0-1.fc41.aarch64 libeconf-0.6.2-2.fc41.aarch64 libevent-2.1.12-13.fc41.aarch64 libfdisk-2.40.1-1.fc41.aarch64 libffi-3.4.6-1.fc41.aarch64 libgcc-14.1.1-4.fc41.aarch64 libgomp-14.1.1-4.fc41.aarch64 libidn2-2.3.7-1.fc40.aarch64 libmount-2.40.1-1.fc41.aarch64 libnghttp2-1.62.0-1.fc41.aarch64 libnsl2-2.0.1-1.fc40.aarch64 libpkgconf-2.1.1-1.fc41.aarch64 libpsl-0.21.5-3.fc40.aarch64 libpwquality-1.4.5-9.fc40.aarch64 libselinux-3.6-4.fc40.aarch64 libsemanage-3.6-3.fc40.aarch64 libsepol-3.6-3.fc40.aarch64 libsmartcols-2.40.1-1.fc41.aarch64 libssh-0.10.6-6.fc41.aarch64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.1.1-4.fc41.aarch64 libtasn1-4.19.0-6.fc40.aarch64 libtirpc-1.3.4-1.rc3.fc41.aarch64 libtool-ltdl-2.4.7-11.fc41.aarch64 libunistring-1.1-7.fc41.aarch64 libutempter-1.2.1-13.fc40.aarch64 libuuid-2.40.1-1.fc41.aarch64 libverto-0.3.2-8.fc40.aarch64 libxcrypt-4.4.36-5.fc40.aarch64 libxml2-2.12.7-1.fc41.aarch64 libzstd-1.5.6-1.fc41.aarch64 lua-libs-5.4.6-5.fc40.aarch64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.aarch64 mpfr-4.2.1-4.fc41.aarch64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.aarch64 ocaml-srpm-macros-10-2.fc41.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.8-1.fc41.aarch64 openssl-libs-3.2.2-1.fc41.aarch64 p11-kit-0.25.3-4.fc40.aarch64 p11-kit-trust-0.25.3-4.fc40.aarch64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-3.fc41.aarch64 pam-libs-1.6.1-3.fc41.aarch64 patch-2.7.6-24.fc40.aarch64 pcre2-10.43-2.fc41.1.aarch64 pcre2-syntax-10.43-2.fc41.1.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.1-1.fc41.aarch64 pkgconf-m4-2.1.1-1.fc41.noarch pkgconf-pkg-config-2.1.1-1.fc41.aarch64 popt-1.19-6.fc40.aarch64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.1-1.fc41.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.14-1.fc41.noarch qt6-srpm-macros-6.7.1-1.fc41.noarch readline-8.2-8.fc40.aarch64 redhat-rpm-config-292-1.fc41.noarch rpm-4.19.91-8.fc41.aarch64 rpm-build-4.19.91-8.fc41.aarch64 rpm-build-libs-4.19.91-8.fc41.aarch64 rpm-libs-4.19.91-8.fc41.aarch64 rpm-sequoia-1.6.0-3.fc41.aarch64 rust-srpm-macros-26.3-1.fc41.noarch sed-4.9-1.fc40.aarch64 setup-2.15.0-4.fc41.noarch shadow-utils-4.15.1-5.fc41.aarch64 sqlite-libs-3.46.0-1.fc41.aarch64 systemd-libs-256~rc4-2.fc41.aarch64 tar-1.35-3.fc40.aarch64 unzip-6.0-63.fc40.aarch64 util-linux-2.40.1-1.fc41.aarch64 util-linux-core-2.40.1-1.fc41.aarch64 which-2.21-41.fc40.aarch64 xxhash-libs-0.8.2-2.fc40.aarch64 xz-5.4.6-3.fc41.aarch64 xz-libs-5.4.6-3.fc41.aarch64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.aarch64 zlib-ng-compat-2.1.6-6.fc41.aarch64 zstd-1.5.6-1.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1717804800 Wrote: /builddir/build/SRPMS/moose-3.1.5-21.fc41.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-40-aarch64-1717834157.279534/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-40-aarch64-1717834157.279534/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-3t_6th73/moose/moose.spec) Config(child) 0 minutes 27 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/moose-3.1.5-21.fc41.src.rpm) Config(fedora-40-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-aarch64-bootstrap-1717834157.279534/root. INFO: reusing tmpfs at /var/lib/mock/fedora-40-aarch64-bootstrap-1717834157.279534/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-40-aarch64-1717834157.279534/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc40.aarch64 rpm-sequoia-1.6.0-3.fc40.aarch64 python3-dnf-4.20.0-1.fc41.noarch dnf5-5.2.3.0-1.fc41.aarch64 dnf5-plugins-5.2.3.0-1.fc41.aarch64 Finish: chroot init Start: build phase for moose-3.1.5-21.fc41.src.rpm Start: build setup for moose-3.1.5-21.fc41.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1717804800 Wrote: /builddir/build/SRPMS/moose-3.1.5-21.fc41.src.rpm Updating and loading repositories: Copr repository 100% | 51.2 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 77.8 KiB/s | 4.1 KiB | 00m00s fedora 100% | 182.5 KiB/s | 18.6 KiB | 00m00s updates 100% | 66.7 KiB/s | 17.5 KiB | 00m00s Repositories loaded. Package "tar-2:1.35-3.fc40.aarch64" is already installed. 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.7 KiB python3-rpm-macros noarch 3.12-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.4 KiB rhash aarch64 1.4.4-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 585.8 KiB tinyxml aarch64 2.6.2-29.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 230.9 KiB tzdata noarch 2024a-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB vim-filesystem noarch 2:9.1.452-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.0 B xz-devel aarch64 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 255.8 KiB Transaction Summary: Installing: 148 packages Total size of inbound packages is 157 MiB. Need to download 47 MiB. After this operation 646 MiB will be used (install 646 MiB, remove 0 B). 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repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Finish: build setup for moose-3.1.5-21.fc41.src.rpm Start: rpmbuild moose-3.1.5-21.fc41.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1717804800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.aGqDTO + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + test -d /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/rm -rf /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.UZVJEc + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd /builddir/build/BUILD/moose-3.1.5-build + rm -rf moose-core-3.1.5 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/moose-core-3.1.5.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd moose-core-3.1.5 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + GIT_COMMITTER_DATE=@1717804800 + GIT_AUTHOR_DATE=@1717804800 + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'moose-3.1.5 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/c570f7c057f9c0ca7360c82a8932bcb0df222da9.patch + /usr/bin/git apply --index --reject - Checking patch pymoose/PyRun.cpp... Applied patch pymoose/PyRun.cpp cleanly. + GIT_COMMITTER_DATE=@1717804800 + GIT_AUTHOR_DATE=@1717804800 + /usr/bin/git commit -q -m c570f7c057f9c0ca7360c82a8932bcb0df222da9.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/665c532745987fb1c7a8fc2a9a57bffa330480b4.patch + /usr/bin/git apply --index --reject - Checking patch pymoose/PyRun.cpp... Applied patch pymoose/PyRun.cpp cleanly. + GIT_COMMITTER_DATE=@1717804800 + GIT_AUTHOR_DATE=@1717804800 + /usr/bin/git commit -q -m 665c532745987fb1c7a8fc2a9a57bffa330480b4.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-Use-.so-suffix-for-all-arches.patch + /usr/bin/git apply --index --reject - Checking patch python/setup.cmake.py... Applied patch python/setup.cmake.py cleanly. + GIT_COMMITTER_DATE=@1717804800 + GIT_AUTHOR_DATE=@1717804800 + /usr/bin/git commit -q -m 0001-Use-.so-suffix-for-all-arches.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/moose-python3.10.patch + /usr/bin/git apply --index --reject - Checking patch python/moose/utils.py... Hunk #2 succeeded at 203 (offset -1 lines). Applied patch python/moose/utils.py cleanly. + GIT_COMMITTER_DATE=@1717804800 + GIT_AUTHOR_DATE=@1717804800 + /usr/bin/git commit -q -m moose-python3.10.patch --author 'rpm-build ' + sed -i s/-O3// CMakeLists.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Hfn03W + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd moose-core-3.1.5 + cmake_opts=(-DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_C_FLAGS="-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer" -DCMAKE_CXX_FLAGS="-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer" -DCMAKE_EXE_LINKER_FLAGS="$LDFLAGS -Wl,--build-id" -DCMAKE_MODULE_LINKER_FLAGS="$LDFLAGS -Wl,--build-id" -DVERSION_MOOSE=3.1.5 -DCMAKE_BUILD_TYPE="Release|RelWithDebugInfo" -DCMAKE_INSTALL_DO_STRIP=0 -DPYTHON_EXECUTABLE=/usr/bin/python3) + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=ON '-DCMAKE_C_FLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' '-DCMAKE_CXX_FLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id' '-DCMAKE_MODULE_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id' -DVERSION_MOOSE=3.1.5 '-DCMAKE_BUILD_TYPE=Release|RelWithDebugInfo' -DCMAKE_INSTALL_DO_STRIP=0 -DPYTHON_EXECUTABLE=/usr/bin/python3 CMake Deprecation Warning at CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 14.1.1 -- The CXX compiler identification is GNU 14.1.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success -- Performing Test COMPILER_SUPPORTS_CXX0X -- Performing Test COMPILER_SUPPORTS_CXX0X - Success -- Performing Test COMPILER_WARNS_STRICT_ALIASING -- Performing Test COMPILER_WARNS_STRICT_ALIASING - Success -- Performing Test COMPILER_SUPPORT_UNUSED_BUT_SET_VARIABLE_NO_WARN -- Performing Test COMPILER_SUPPORT_UNUSED_BUT_SET_VARIABLE_NO_WARN - Success -- Your compiler supports c++11 features. Enabling it -- Found PkgConfig: /usr/bin/pkg-config (found version "2.1.1") -- MOOSE Version 3.1.5 -- | Writing 3.1.5 to /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/python/VERSION -- Operating system: Linux -- Building for Release/No unit tests. -- GSL version : 2.7 -- Found GSL /usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so -- Found HDF5: /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so (found version "1.12.1") found components: CXX HL -- MOOSE will use following HDF5 /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so;/usr/lib64/libhdf5_hl_cpp.so;/usr/lib64/libhdf5_hl.so -- Using gsl libraries: /usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so CMake Deprecation Warning at external/muparser/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at basecode/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at signeur/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at ksolve/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at hsolve/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at diffusion/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at synapse/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at intfire/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Shared libs: /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so;/usr/lib64/libhdf5_hl_cpp.so;/usr/lib64/libhdf5_hl.so;/usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so CMake Warning (dev) at CMakeLists.txt:381 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.12.3", minimum required is "3.4") -- Python include paths: -I/usr/include/python3.12 -I/usr/include/python3.12 -- NumPy include path: /usr/lib64/python3.12/site-packages/numpy/core/include -- Platform: Linux-6.5.6-300.fc39.aarch64-aarch64-with-glibc2.39.9000 CMake Warning (dev) at CMakeLists.txt:411 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found version "3.12.3") -- binary distribution file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist/pymoose-3.1.5.CMAKE.tar.gz ======================================= If cmake did not report any error, run 'make' to build MOOSE ======================================= -- Configuring done (2.4s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -B/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f intfire/CMakeFiles/intfire.dir/build.make intfire/CMakeFiles/intfire.dir/depend /usr/bin/gmake -f external/muparser/CMakeFiles/muparser.dir/build.make external/muparser/CMakeFiles/muparser.dir/depend /usr/bin/gmake -f basecode/CMakeFiles/basecode.dir/build.make basecode/CMakeFiles/basecode.dir/depend /usr/bin/gmake -f msg/CMakeFiles/msg.dir/build.make msg/CMakeFiles/msg.dir/depend 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/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg/CMakeFiles/msg.dir/DependInfo.cmake "--color=" cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode 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'/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f basecode/CMakeFiles/basecode.dir/build.make basecode/CMakeFiles/basecode.dir/build /usr/bin/gmake -f intfire/CMakeFiles/intfire.dir/build.make intfire/CMakeFiles/intfire.dir/build /usr/bin/gmake -f msg/CMakeFiles/msg.dir/build.make msg/CMakeFiles/msg.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f external/muparser/CMakeFiles/muparser.dir/build.make external/muparser/CMakeFiles/muparser.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 0%] Building CXX object basecode/CMakeFiles/basecode.dir/consts.cpp.o [ 0%] Building CXX object intfire/CMakeFiles/intfire.dir/AdExIF.cpp.o [ 0%] Building CXX object msg/CMakeFiles/msg.dir/Msg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/AdExIF.cpp.o -MF CMakeFiles/intfire.dir/AdExIF.cpp.o.d -o CMakeFiles/intfire.dir/AdExIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/AdExIF.cpp cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/Msg.cpp.o -MF CMakeFiles/msg.dir/Msg.cpp.o.d -o CMakeFiles/msg.dir/Msg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/Msg.cpp [ 1%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParser.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC 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/usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Element.cpp.o -MF CMakeFiles/basecode.dir/Element.cpp.o.d -o CMakeFiles/basecode.dir/Element.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Element.cpp [ 1%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserBase.cpp.o -MF CMakeFiles/muparser.dir/src/muParserBase.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserBase.cpp [ 2%] Building CXX object intfire/CMakeFiles/intfire.dir/AdThreshIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/AdThreshIF.cpp.o -MF CMakeFiles/intfire.dir/AdThreshIF.cpp.o.d -o CMakeFiles/intfire.dir/AdThreshIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/AdThreshIF.cpp [ 3%] Building CXX object msg/CMakeFiles/msg.dir/DiagonalMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/DiagonalMsg.cpp.o -MF CMakeFiles/msg.dir/DiagonalMsg.cpp.o.d -o CMakeFiles/msg.dir/DiagonalMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/DiagonalMsg.cpp [ 4%] Building CXX object basecode/CMakeFiles/basecode.dir/DataElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/DataElement.cpp.o -MF CMakeFiles/basecode.dir/DataElement.cpp.o.d -o CMakeFiles/basecode.dir/DataElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/DataElement.cpp [ 4%] Building CXX object intfire/CMakeFiles/intfire.dir/ExIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/ExIF.cpp.o -MF CMakeFiles/intfire.dir/ExIF.cpp.o.d -o CMakeFiles/intfire.dir/ExIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/ExIF.cpp [ 4%] Building CXX object basecode/CMakeFiles/basecode.dir/GlobalDataElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/GlobalDataElement.cpp.o -MF CMakeFiles/basecode.dir/GlobalDataElement.cpp.o.d -o CMakeFiles/basecode.dir/GlobalDataElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/GlobalDataElement.cpp [ 5%] Building CXX object basecode/CMakeFiles/basecode.dir/LocalDataElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/LocalDataElement.cpp.o -MF CMakeFiles/basecode.dir/LocalDataElement.cpp.o.d -o CMakeFiles/basecode.dir/LocalDataElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/LocalDataElement.cpp [ 5%] Building CXX object msg/CMakeFiles/msg.dir/OneToAllMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/OneToAllMsg.cpp.o -MF CMakeFiles/msg.dir/OneToAllMsg.cpp.o.d -o CMakeFiles/msg.dir/OneToAllMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/OneToAllMsg.cpp [ 6%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o -MF CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserBytecode.cpp [ 6%] Building CXX object basecode/CMakeFiles/basecode.dir/Eref.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Eref.cpp.o -MF CMakeFiles/basecode.dir/Eref.cpp.o.d -o CMakeFiles/basecode.dir/Eref.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Eref.cpp [ 7%] Building CXX object intfire/CMakeFiles/intfire.dir/IntFireBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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CMakeFiles/intfire.dir/IntFireBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/IntFireBase.cpp [ 7%] Building CXX object basecode/CMakeFiles/basecode.dir/Finfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Finfo.cpp.o -MF CMakeFiles/basecode.dir/Finfo.cpp.o.d -o CMakeFiles/basecode.dir/Finfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Finfo.cpp [ 7%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserCallback.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserCallback.cpp.o -MF CMakeFiles/muparser.dir/src/muParserCallback.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserCallback.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserCallback.cpp [ 7%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserDLL.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserDLL.cpp.o -MF CMakeFiles/muparser.dir/src/muParserDLL.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserDLL.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserDLL.cpp [ 8%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserError.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserError.cpp.o -MF CMakeFiles/muparser.dir/src/muParserError.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserError.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserError.cpp [ 9%] Building CXX object msg/CMakeFiles/msg.dir/OneToOneMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/OneToOneMsg.cpp.o -MF CMakeFiles/msg.dir/OneToOneMsg.cpp.o.d -o CMakeFiles/msg.dir/OneToOneMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/OneToOneMsg.cpp [ 9%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserInt.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserInt.cpp.o -MF CMakeFiles/muparser.dir/src/muParserInt.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserInt.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserInt.cpp [ 9%] Building CXX object msg/CMakeFiles/msg.dir/SingleMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/SingleMsg.cpp.o -MF CMakeFiles/msg.dir/SingleMsg.cpp.o.d -o CMakeFiles/msg.dir/SingleMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SingleMsg.cpp [ 9%] Building CXX object intfire/CMakeFiles/intfire.dir/IzhIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/IzhIF.cpp.o -MF CMakeFiles/intfire.dir/IzhIF.cpp.o.d -o CMakeFiles/intfire.dir/IzhIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/IzhIF.cpp [ 10%] Building CXX object basecode/CMakeFiles/basecode.dir/DestFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/DestFinfo.cpp.o -MF CMakeFiles/basecode.dir/DestFinfo.cpp.o.d -o CMakeFiles/basecode.dir/DestFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/DestFinfo.cpp [ 11%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserTest.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserTest.cpp.o -MF CMakeFiles/muparser.dir/src/muParserTest.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserTest.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserTest.cpp [ 11%] Building CXX object basecode/CMakeFiles/basecode.dir/Cinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Cinfo.cpp.o -MF CMakeFiles/basecode.dir/Cinfo.cpp.o.d -o CMakeFiles/basecode.dir/Cinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Cinfo.cpp [ 11%] Building CXX object msg/CMakeFiles/msg.dir/SparseMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/SparseMsg.cpp.o -MF CMakeFiles/msg.dir/SparseMsg.cpp.o.d -o CMakeFiles/msg.dir/SparseMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp [ 11%] Building CXX object intfire/CMakeFiles/intfire.dir/LIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/LIF.cpp.o -MF CMakeFiles/intfire.dir/LIF.cpp.o.d -o CMakeFiles/intfire.dir/LIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/LIF.cpp [ 12%] Building CXX object intfire/CMakeFiles/intfire.dir/QIF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/QIF.cpp.o -MF CMakeFiles/intfire.dir/QIF.cpp.o.d -o CMakeFiles/intfire.dir/QIF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/QIF.cpp [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/SrcFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/SrcFinfo.cpp.o -MF CMakeFiles/basecode.dir/SrcFinfo.cpp.o.d -o CMakeFiles/basecode.dir/SrcFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/SrcFinfo.cpp [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/ValueFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/ValueFinfo.cpp.o -MF CMakeFiles/basecode.dir/ValueFinfo.cpp.o.d -o CMakeFiles/basecode.dir/ValueFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/ValueFinfo.cpp [ 13%] Building CXX object intfire/CMakeFiles/intfire.dir/testIntFire.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT intfire/CMakeFiles/intfire.dir/testIntFire.cpp.o -MF CMakeFiles/intfire.dir/testIntFire.cpp.o.d -o CMakeFiles/intfire.dir/testIntFire.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/intfire/testIntFire.cpp [ 13%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/./include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -Wno-switch -Wno-unknown-pragmas -MD -MT external/muparser/CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o -MF CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o.d -o CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/src/muParserTokenReader.cpp [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/SharedFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/SharedFinfo.cpp.o -MF CMakeFiles/basecode.dir/SharedFinfo.cpp.o.d -o CMakeFiles/basecode.dir/SharedFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/SharedFinfo.cpp [ 13%] Linking CXX static library libintfire.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/cmake -P CMakeFiles/intfire.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/intfire && /usr/bin/cmake -E cmake_link_script CMakeFiles/intfire.dir/link.txt --verbose=1 /usr/bin/ar qc libintfire.a CMakeFiles/intfire.dir/AdExIF.cpp.o CMakeFiles/intfire.dir/AdThreshIF.cpp.o CMakeFiles/intfire.dir/ExIF.cpp.o CMakeFiles/intfire.dir/IntFireBase.cpp.o CMakeFiles/intfire.dir/IzhIF.cpp.o CMakeFiles/intfire.dir/LIF.cpp.o CMakeFiles/intfire.dir/QIF.cpp.o CMakeFiles/intfire.dir/testIntFire.cpp.o /usr/bin/ranlib libintfire.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 13%] Built target intfire [ 14%] Building CXX object basecode/CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o -MF CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o.d -o CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/FieldElementFinfo.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp: In function ‘fillErefsFromMatrix(SparseMatrix const&, std::vector >, std::allocator > > >&, Element*, Element*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:444:67: warning: ‘entry’ may be used uninitialized [-Wmaybe-uninitialized] 444 | v[i][j] = Eref( e2, colIndex[j], entry[j] ); | ^ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:439:37: note: ‘entry’ was declared here 439 | const unsigned int* entry; | ^~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:444:67: warning: ‘colIndex’ may be used uninitialized [-Wmaybe-uninitialized] 444 | v[i][j] = Eref( e2, colIndex[j], entry[j] ); | ^ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/SparseMsg.cpp:440:37: note: ‘colIndex’ was declared here 440 | const unsigned int* colIndex; | ^~~~~~~~ [ 14%] Building CXX object basecode/CMakeFiles/basecode.dir/FieldElement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/FieldElement.cpp.o -MF CMakeFiles/basecode.dir/FieldElement.cpp.o.d -o CMakeFiles/basecode.dir/FieldElement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/FieldElement.cpp [ 14%] Building CXX object basecode/CMakeFiles/basecode.dir/Id.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/Id.cpp.o -MF CMakeFiles/basecode.dir/Id.cpp.o.d -o CMakeFiles/basecode.dir/Id.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/Id.cpp [ 15%] Building CXX object basecode/CMakeFiles/basecode.dir/ObjId.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/ObjId.cpp.o -MF CMakeFiles/basecode.dir/ObjId.cpp.o.d -o CMakeFiles/basecode.dir/ObjId.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/ObjId.cpp [ 15%] Linking CXX static library libmuparser.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/cmake -P CMakeFiles/muparser.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/external/muparser && /usr/bin/cmake -E cmake_link_script CMakeFiles/muparser.dir/link.txt --verbose=1 /usr/bin/ar qc libmuparser.a CMakeFiles/muparser.dir/src/muParser.cpp.o CMakeFiles/muparser.dir/src/muParserBase.cpp.o CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o CMakeFiles/muparser.dir/src/muParserCallback.cpp.o CMakeFiles/muparser.dir/src/muParserDLL.cpp.o CMakeFiles/muparser.dir/src/muParserError.cpp.o CMakeFiles/muparser.dir/src/muParserInt.cpp.o CMakeFiles/muparser.dir/src/muParserTest.cpp.o CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o /usr/bin/ranlib libmuparser.a [ 15%] Building CXX object basecode/CMakeFiles/basecode.dir/global.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/global.cpp.o -MF CMakeFiles/basecode.dir/global.cpp.o.d -o CMakeFiles/basecode.dir/global.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/global.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 15%] Built target muparser /usr/bin/gmake -f shell/CMakeFiles/shell.dir/build.make shell/CMakeFiles/shell.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell/CMakeFiles/shell.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f shell/CMakeFiles/shell.dir/build.make shell/CMakeFiles/shell.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 15%] Building CXX object shell/CMakeFiles/shell.dir/Shell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/Shell.cpp.o -MF CMakeFiles/shell.dir/Shell.cpp.o.d -o CMakeFiles/shell.dir/Shell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/Shell.cpp [ 16%] Building CXX object basecode/CMakeFiles/basecode.dir/SetGet.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/SetGet.cpp.o -MF CMakeFiles/basecode.dir/SetGet.cpp.o.d -o CMakeFiles/basecode.dir/SetGet.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/SetGet.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/global.cpp: In function ‘bool moose::createParentDirs(const std::string&)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/global.cpp:155:15: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 155 | system( command.c_str() ); | ~~~~~~^~~~~~~~~~~~~~~~~~~ [ 16%] Building CXX object basecode/CMakeFiles/basecode.dir/OpFuncBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/OpFuncBase.cpp.o -MF CMakeFiles/basecode.dir/OpFuncBase.cpp.o.d -o CMakeFiles/basecode.dir/OpFuncBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/OpFuncBase.cpp [ 16%] Building CXX object basecode/CMakeFiles/basecode.dir/EpFunc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT msg/CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o -MF CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o.d -o CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/OneToOneDataIndexMsg.cpp [ 18%] Building CXX object basecode/CMakeFiles/basecode.dir/HopFunc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT basecode/CMakeFiles/basecode.dir/HopFunc.cpp.o -MF CMakeFiles/basecode.dir/HopFunc.cpp.o.d -o CMakeFiles/basecode.dir/HopFunc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/HopFunc.cpp [ 18%] Building CXX object basecode/CMakeFiles/basecode.dir/SparseMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC 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CMakeFiles/basecode.dir/testAsync.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/testAsync.cpp [ 19%] Building CXX object msg/CMakeFiles/msg.dir/testMsg.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/ShellCopy.cpp.o -MF CMakeFiles/shell.dir/ShellCopy.cpp.o.d -o CMakeFiles/shell.dir/ShellCopy.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/ShellCopy.cpp [ 20%] Building CXX object shell/CMakeFiles/shell.dir/ShellThreads.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/LoadModels.cpp.o -MF CMakeFiles/shell.dir/LoadModels.cpp.o.d -o CMakeFiles/shell.dir/LoadModels.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/LoadModels.cpp [ 20%] Linking CXX static library libmsg.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/cmake -P CMakeFiles/msg.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/msg && /usr/bin/cmake -E cmake_link_script CMakeFiles/msg.dir/link.txt --verbose=1 /usr/bin/ar qc libmsg.a CMakeFiles/msg.dir/Msg.cpp.o CMakeFiles/msg.dir/DiagonalMsg.cpp.o CMakeFiles/msg.dir/OneToAllMsg.cpp.o CMakeFiles/msg.dir/OneToOneMsg.cpp.o CMakeFiles/msg.dir/SingleMsg.cpp.o CMakeFiles/msg.dir/SparseMsg.cpp.o CMakeFiles/msg.dir/OneToOneDataIndexMsg.cpp.o CMakeFiles/msg.dir/testMsg.cpp.o /usr/bin/ranlib libmsg.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 20%] Built target msg /usr/bin/gmake -f randnum/CMakeFiles/randnum.dir/build.make randnum/CMakeFiles/randnum.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum/CMakeFiles/randnum.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f randnum/CMakeFiles/randnum.dir/build.make randnum/CMakeFiles/randnum.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 21%] Building CXX object randnum/CMakeFiles/randnum.dir/Binomial.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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CMakeFiles/randnum.dir/Binomial.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Binomial.cpp [ 22%] Building CXX object shell/CMakeFiles/shell.dir/SaveModels.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/SaveModels.cpp.o -MF CMakeFiles/shell.dir/SaveModels.cpp.o.d -o CMakeFiles/shell.dir/SaveModels.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/SaveModels.cpp [ 22%] Building CXX object randnum/CMakeFiles/randnum.dir/BinomialRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/BinomialRng.cpp.o -MF CMakeFiles/randnum.dir/BinomialRng.cpp.o.d -o CMakeFiles/randnum.dir/BinomialRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/BinomialRng.cpp [ 22%] Building CXX object shell/CMakeFiles/shell.dir/Neutral.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/Neutral.cpp.o -MF CMakeFiles/shell.dir/Neutral.cpp.o.d -o CMakeFiles/shell.dir/Neutral.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/Neutral.cpp [ 23%] Building CXX object shell/CMakeFiles/shell.dir/Wildcard.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/../msg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT shell/CMakeFiles/shell.dir/Wildcard.cpp.o -MF CMakeFiles/shell.dir/Wildcard.cpp.o.d -o CMakeFiles/shell.dir/Wildcard.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/Wildcard.cpp [ 24%] Building CXX object randnum/CMakeFiles/randnum.dir/Exponential.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Exponential.cpp.o -MF CMakeFiles/randnum.dir/Exponential.cpp.o.d -o CMakeFiles/randnum.dir/Exponential.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Exponential.cpp [ 24%] Building CXX object randnum/CMakeFiles/randnum.dir/ExponentialRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/ExponentialRng.cpp.o -MF CMakeFiles/randnum.dir/ExponentialRng.cpp.o.d -o CMakeFiles/randnum.dir/ExponentialRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/ExponentialRng.cpp [ 24%] Building CXX object shell/CMakeFiles/shell.dir/testShell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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CMakeFiles/shell.dir/testShell.cpp.o.d -o CMakeFiles/shell.dir/testShell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/shell/testShell.cpp [ 24%] Building CXX object randnum/CMakeFiles/randnum.dir/Gamma.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Gamma.cpp.o -MF CMakeFiles/randnum.dir/Gamma.cpp.o.d -o CMakeFiles/randnum.dir/Gamma.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Gamma.cpp [ 25%] Building CXX object randnum/CMakeFiles/randnum.dir/GammaRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/GammaRng.cpp.o -MF CMakeFiles/randnum.dir/GammaRng.cpp.o.d -o CMakeFiles/randnum.dir/GammaRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/GammaRng.cpp [ 25%] Linking CXX static library libbasecode.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/cmake -P CMakeFiles/basecode.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/basecode && /usr/bin/cmake -E cmake_link_script CMakeFiles/basecode.dir/link.txt --verbose=1 /usr/bin/ar qc libbasecode.a CMakeFiles/basecode.dir/consts.cpp.o CMakeFiles/basecode.dir/Element.cpp.o CMakeFiles/basecode.dir/DataElement.cpp.o CMakeFiles/basecode.dir/GlobalDataElement.cpp.o CMakeFiles/basecode.dir/LocalDataElement.cpp.o CMakeFiles/basecode.dir/Eref.cpp.o CMakeFiles/basecode.dir/Finfo.cpp.o CMakeFiles/basecode.dir/DestFinfo.cpp.o CMakeFiles/basecode.dir/Cinfo.cpp.o CMakeFiles/basecode.dir/SrcFinfo.cpp.o CMakeFiles/basecode.dir/ValueFinfo.cpp.o CMakeFiles/basecode.dir/SharedFinfo.cpp.o CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o CMakeFiles/basecode.dir/FieldElement.cpp.o CMakeFiles/basecode.dir/Id.cpp.o CMakeFiles/basecode.dir/ObjId.cpp.o CMakeFiles/basecode.dir/global.cpp.o CMakeFiles/basecode.dir/SetGet.cpp.o CMakeFiles/basecode.dir/OpFuncBase.cpp.o CMakeFiles/basecode.dir/EpFunc.cpp.o CMakeFiles/basecode.dir/HopFunc.cpp.o CMakeFiles/basecode.dir/SparseMatrix.cpp.o CMakeFiles/basecode.dir/doubleEq.cpp.o CMakeFiles/basecode.dir/testAsync.cpp.o /usr/bin/ranlib libbasecode.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 25%] Built target basecode /usr/bin/gmake -f scheduling/CMakeFiles/scheduling.dir/build.make scheduling/CMakeFiles/scheduling.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling/CMakeFiles/scheduling.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f scheduling/CMakeFiles/scheduling.dir/build.make scheduling/CMakeFiles/scheduling.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 25%] Building CXX object scheduling/CMakeFiles/scheduling.dir/Clock.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 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CMakeFiles/scheduling.dir/Clock.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/Clock.cpp [ 25%] Building CXX object randnum/CMakeFiles/randnum.dir/Normal.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Normal.cpp.o -MF CMakeFiles/randnum.dir/Normal.cpp.o.d -o CMakeFiles/randnum.dir/Normal.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Normal.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Normal.cpp: In function ‘Normal::aliasMethod()’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Normal.cpp:311:50: warning: ‘uniform_prime’ may be used uninitialized [-Wmaybe-uninitialized] 311 | v_num = (unsigned long)(d*uniform*uniform*uniform_prime); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Normal.cpp:205:19: note: ‘uniform_prime’ was declared here 205 | unsigned long uniform_prime; | ^~~~~~~~~~~~~ [ 25%] Building CXX object randnum/CMakeFiles/randnum.dir/NormalRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/NormalRng.cpp.o -MF CMakeFiles/randnum.dir/NormalRng.cpp.o.d -o CMakeFiles/randnum.dir/NormalRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/NormalRng.cpp [ 25%] Building CXX object scheduling/CMakeFiles/scheduling.dir/testScheduling.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT scheduling/CMakeFiles/scheduling.dir/testScheduling.cpp.o -MF CMakeFiles/scheduling.dir/testScheduling.cpp.o.d -o CMakeFiles/scheduling.dir/testScheduling.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling/testScheduling.cpp [ 26%] Building CXX object randnum/CMakeFiles/randnum.dir/Poisson.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Poisson.cpp.o -MF CMakeFiles/randnum.dir/Poisson.cpp.o.d -o CMakeFiles/randnum.dir/Poisson.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Poisson.cpp [ 26%] Linking CXX static library libshell.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/cmake -P CMakeFiles/shell.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/shell && /usr/bin/cmake -E cmake_link_script CMakeFiles/shell.dir/link.txt --verbose=1 /usr/bin/ar qc libshell.a CMakeFiles/shell.dir/Shell.cpp.o CMakeFiles/shell.dir/ShellCopy.cpp.o CMakeFiles/shell.dir/ShellThreads.cpp.o CMakeFiles/shell.dir/LoadModels.cpp.o CMakeFiles/shell.dir/SaveModels.cpp.o CMakeFiles/shell.dir/Neutral.cpp.o CMakeFiles/shell.dir/Wildcard.cpp.o CMakeFiles/shell.dir/testShell.cpp.o /usr/bin/ranlib libshell.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 26%] Built target shell /usr/bin/gmake -f biophysics/CMakeFiles/biophysics.dir/build.make biophysics/CMakeFiles/biophysics.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics/CMakeFiles/biophysics.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f biophysics/CMakeFiles/biophysics.dir/build.make biophysics/CMakeFiles/biophysics.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 26%] Building CXX object biophysics/CMakeFiles/biophysics.dir/IntFire.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/IntFire.cpp.o -MF CMakeFiles/biophysics.dir/IntFire.cpp.o.d -o CMakeFiles/biophysics.dir/IntFire.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/IntFire.cpp [ 26%] Building CXX object randnum/CMakeFiles/randnum.dir/PoissonRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/PoissonRng.cpp.o -MF CMakeFiles/randnum.dir/PoissonRng.cpp.o.d -o CMakeFiles/randnum.dir/PoissonRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/PoissonRng.cpp [ 27%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SpikeGen.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SpikeGen.cpp.o -MF CMakeFiles/biophysics.dir/SpikeGen.cpp.o.d -o CMakeFiles/biophysics.dir/SpikeGen.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/SpikeGen.cpp [ 28%] Building CXX object randnum/CMakeFiles/randnum.dir/Probability.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Probability.cpp.o -MF CMakeFiles/randnum.dir/Probability.cpp.o.d -o CMakeFiles/randnum.dir/Probability.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Probability.cpp [ 28%] Building CXX object randnum/CMakeFiles/randnum.dir/RandGenerator.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/RandGenerator.cpp.o -MF CMakeFiles/randnum.dir/RandGenerator.cpp.o.d -o CMakeFiles/randnum.dir/RandGenerator.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/RandGenerator.cpp [ 28%] Building CXX object biophysics/CMakeFiles/biophysics.dir/RandSpike.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/RandSpike.cpp.o -MF CMakeFiles/biophysics.dir/RandSpike.cpp.o.d -o CMakeFiles/biophysics.dir/RandSpike.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/RandSpike.cpp [ 29%] Linking CXX static library libscheduling.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/cmake -P CMakeFiles/scheduling.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/scheduling && /usr/bin/cmake -E cmake_link_script CMakeFiles/scheduling.dir/link.txt --verbose=1 /usr/bin/ar qc libscheduling.a CMakeFiles/scheduling.dir/Clock.cpp.o CMakeFiles/scheduling.dir/testScheduling.cpp.o /usr/bin/ranlib libscheduling.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 29%] Built target scheduling /usr/bin/gmake -f builtins/CMakeFiles/moose_builtins.dir/build.make builtins/CMakeFiles/moose_builtins.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins/CMakeFiles/moose_builtins.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f builtins/CMakeFiles/moose_builtins.dir/build.make builtins/CMakeFiles/moose_builtins.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 29%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Arith.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 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CMakeFiles/moose_builtins.dir/Arith.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Arith.cpp [ 29%] Building CXX object randnum/CMakeFiles/randnum.dir/Uniform.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/Uniform.cpp.o -MF CMakeFiles/randnum.dir/Uniform.cpp.o.d -o CMakeFiles/randnum.dir/Uniform.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/Uniform.cpp [ 30%] Building CXX object randnum/CMakeFiles/randnum.dir/UniformRng.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/UniformRng.cpp.o -MF CMakeFiles/randnum.dir/UniformRng.cpp.o.d -o CMakeFiles/randnum.dir/UniformRng.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/UniformRng.cpp [ 31%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o -MF CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o.d -o CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CompartmentDataHolder.cpp [ 31%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CompartmentBase.cpp.o [ 32%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Group.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Group.cpp.o -MF CMakeFiles/moose_builtins.dir/Group.cpp.o.d -o CMakeFiles/moose_builtins.dir/Group.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Group.cpp cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CompartmentBase.cpp.o -MF CMakeFiles/biophysics.dir/CompartmentBase.cpp.o.d -o CMakeFiles/biophysics.dir/CompartmentBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CompartmentBase.cpp [ 32%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Mstring.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Mstring.cpp.o -MF CMakeFiles/moose_builtins.dir/Mstring.cpp.o.d -o CMakeFiles/moose_builtins.dir/Mstring.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Mstring.cpp [ 32%] Building CXX object randnum/CMakeFiles/randnum.dir/mt19937ar.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT randnum/CMakeFiles/randnum.dir/mt19937ar.cpp.o -MF CMakeFiles/randnum.dir/mt19937ar.cpp.o.d -o CMakeFiles/randnum.dir/mt19937ar.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/mt19937ar.cpp In file included from /usr/include/sys/time.h:21, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/randnum/mt19937ar.cpp:49: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ [ 33%] Linking CXX static library librandnum.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/cmake -P CMakeFiles/randnum.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/randnum && /usr/bin/cmake -E cmake_link_script CMakeFiles/randnum.dir/link.txt --verbose=1 /usr/bin/ar qc librandnum.a CMakeFiles/randnum.dir/Binomial.cpp.o CMakeFiles/randnum.dir/BinomialRng.cpp.o CMakeFiles/randnum.dir/Exponential.cpp.o CMakeFiles/randnum.dir/ExponentialRng.cpp.o CMakeFiles/randnum.dir/Gamma.cpp.o CMakeFiles/randnum.dir/GammaRng.cpp.o CMakeFiles/randnum.dir/Normal.cpp.o CMakeFiles/randnum.dir/NormalRng.cpp.o CMakeFiles/randnum.dir/Poisson.cpp.o CMakeFiles/randnum.dir/PoissonRng.cpp.o CMakeFiles/randnum.dir/Probability.cpp.o CMakeFiles/randnum.dir/RandGenerator.cpp.o CMakeFiles/randnum.dir/Uniform.cpp.o CMakeFiles/randnum.dir/UniformRng.cpp.o CMakeFiles/randnum.dir/mt19937ar.cpp.o /usr/bin/ranlib librandnum.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 33%] Built target randnum /usr/bin/gmake -f utility/CMakeFiles/utility.dir/build.make utility/CMakeFiles/utility.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/strutil.cpp.o -MF CMakeFiles/utility.dir/strutil.cpp.o.d -o CMakeFiles/utility.dir/strutil.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/strutil.cpp [ 34%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Func.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Func.cpp.o -MF CMakeFiles/moose_builtins.dir/Func.cpp.o.d -o CMakeFiles/moose_builtins.dir/Func.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Func.cpp [ 34%] Building CXX object utility/CMakeFiles/utility.dir/types.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Function.cpp.o -MF CMakeFiles/moose_builtins.dir/Function.cpp.o.d -o CMakeFiles/moose_builtins.dir/Function.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Function.cpp [ 36%] Building CXX object utility/CMakeFiles/utility.dir/numutil.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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CMakeFiles/utility.dir/numutil.cpp.o.d -o CMakeFiles/utility.dir/numutil.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/numutil.cpp [ 36%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Compartment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Compartment.cpp.o -MF CMakeFiles/biophysics.dir/Compartment.cpp.o.d -o CMakeFiles/biophysics.dir/Compartment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Compartment.cpp [ 36%] Building CXX object utility/CMakeFiles/utility.dir/Annotator.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/Annotator.cpp.o -MF CMakeFiles/utility.dir/Annotator.cpp.o.d -o CMakeFiles/utility.dir/Annotator.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/Annotator.cpp [ 37%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SymCompartment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SymCompartment.cpp.o -MF 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/GapJunction.cpp.o -MF CMakeFiles/biophysics.dir/GapJunction.cpp.o.d -o CMakeFiles/biophysics.dir/GapJunction.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/GapJunction.cpp [ 38%] Building CXX object utility/CMakeFiles/utility.dir/Vec.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT utility/CMakeFiles/utility.dir/cnpy.cpp.o -MF CMakeFiles/utility.dir/cnpy.cpp.o.d -o CMakeFiles/utility.dir/cnpy.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/cnpy.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/cnpy.cpp: In function ‘bool cnpy2::is_valid_numpy_file(FILE*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/utility/cnpy.cpp:88:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 88 | fread( buffer, sizeof(char), __pre__size__, fp ); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Linking CXX static library libutility.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/cmake -P CMakeFiles/utility.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/utility && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility.dir/link.txt --verbose=1 /usr/bin/ar qc libutility.a CMakeFiles/utility.dir/strutil.cpp.o CMakeFiles/utility.dir/types.cpp.o CMakeFiles/utility.dir/setupenv.cpp.o CMakeFiles/utility.dir/numutil.cpp.o CMakeFiles/utility.dir/Annotator.cpp.o CMakeFiles/utility.dir/Vec.cpp.o CMakeFiles/utility.dir/cnpy.cpp.o /usr/bin/ranlib libutility.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 39%] Built target utility /usr/bin/gmake -f mesh/CMakeFiles/mesh.dir/build.make mesh/CMakeFiles/mesh.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh/CMakeFiles/mesh.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f mesh/CMakeFiles/mesh.dir/build.make mesh/CMakeFiles/mesh.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 39%] Building CXX object mesh/CMakeFiles/mesh.dir/ChemCompt.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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Building CXX object builtins/CMakeFiles/moose_builtins.dir/InputVariable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/InputVariable.cpp.o -MF CMakeFiles/moose_builtins.dir/InputVariable.cpp.o.d -o CMakeFiles/moose_builtins.dir/InputVariable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/InputVariable.cpp [ 40%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/TableBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/TableBase.cpp.o -MF CMakeFiles/moose_builtins.dir/TableBase.cpp.o.d -o CMakeFiles/moose_builtins.dir/TableBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/TableBase.cpp [ 41%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ChanCommon.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ChanCommon.cpp.o -MF CMakeFiles/biophysics.dir/ChanCommon.cpp.o.d -o CMakeFiles/biophysics.dir/ChanCommon.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ChanCommon.cpp [ 41%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Table.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Table.cpp.o -MF CMakeFiles/moose_builtins.dir/Table.cpp.o.d -o CMakeFiles/moose_builtins.dir/Table.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Table.cpp [ 41%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannel.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHChannel.cpp.o -MF CMakeFiles/biophysics.dir/HHChannel.cpp.o.d -o CMakeFiles/biophysics.dir/HHChannel.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHChannel.cpp [ 42%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannelBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHChannelBase.cpp.o -MF CMakeFiles/biophysics.dir/HHChannelBase.cpp.o.d -o CMakeFiles/biophysics.dir/HHChannelBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHChannelBase.cpp [ 43%] Building CXX object mesh/CMakeFiles/mesh.dir/MeshCompt.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/MeshCompt.cpp.o -MF CMakeFiles/mesh.dir/MeshCompt.cpp.o.d -o CMakeFiles/mesh.dir/MeshCompt.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/MeshCompt.cpp [ 43%] Building CXX object mesh/CMakeFiles/mesh.dir/MeshEntry.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/MeshEntry.cpp.o -MF CMakeFiles/mesh.dir/MeshEntry.cpp.o.d -o CMakeFiles/mesh.dir/MeshEntry.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/MeshEntry.cpp [ 44%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Interpol.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Interpol.cpp.o -MF CMakeFiles/moose_builtins.dir/Interpol.cpp.o.d -o CMakeFiles/moose_builtins.dir/Interpol.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Interpol.cpp [ 44%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o -MF CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o.d -o CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/StimulusTable.cpp [ 44%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannel2D.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHChannel2D.cpp.o -MF CMakeFiles/biophysics.dir/HHChannel2D.cpp.o.d -o CMakeFiles/biophysics.dir/HHChannel2D.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHChannel2D.cpp [ 44%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/TimeTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/TimeTable.cpp.o -MF CMakeFiles/moose_builtins.dir/TimeTable.cpp.o.d -o CMakeFiles/moose_builtins.dir/TimeTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/TimeTable.cpp [ 44%] Building CXX object mesh/CMakeFiles/mesh.dir/CubeMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/CubeMesh.cpp.o -MF CMakeFiles/mesh.dir/CubeMesh.cpp.o.d -o CMakeFiles/mesh.dir/CubeMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/CubeMesh.cpp [ 45%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o -MF CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o.d -o CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/StreamerBase.cpp [ 45%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Streamer.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Streamer.cpp.o -MF CMakeFiles/moose_builtins.dir/Streamer.cpp.o.d -o CMakeFiles/moose_builtins.dir/Streamer.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Streamer.cpp [ 46%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Stats.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Stats.cpp.o -MF CMakeFiles/moose_builtins.dir/Stats.cpp.o.d -o CMakeFiles/moose_builtins.dir/Stats.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Stats.cpp [ 46%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHGate.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHGate.cpp.o -MF CMakeFiles/biophysics.dir/HHGate.cpp.o.d -o CMakeFiles/biophysics.dir/HHGate.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHGate.cpp [ 46%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o -MF CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o.d -o CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/Interpol2D.cpp [ 46%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o -MF CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o.d -o CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp [ 47%] Building CXX object mesh/CMakeFiles/mesh.dir/CylBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/CylBase.cpp.o -MF CMakeFiles/mesh.dir/CylBase.cpp.o.d -o CMakeFiles/mesh.dir/CylBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/CylBase.cpp [ 47%] Building CXX object mesh/CMakeFiles/mesh.dir/CylMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/CylMesh.cpp.o -MF CMakeFiles/mesh.dir/CylMesh.cpp.o.d -o CMakeFiles/mesh.dir/CylMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/CylMesh.cpp [ 48%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHGate2D.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/HHGate2D.cpp.o -MF CMakeFiles/biophysics.dir/HHGate2D.cpp.o.d -o CMakeFiles/biophysics.dir/HHGate2D.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/HHGate2D.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp: In function ‘require_group(long, std::__cxx11::basic_string, std::allocator >)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp:107:12: warning: ‘current’ may be used uninitialized [-Wmaybe-uninitialized] 107 | return current; | ^~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5WriterBase.cpp:87:24: note: ‘current’ was declared here 87 | hid_t prev = file, current; | ^~~~~~~ [ 49%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o -MF CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o.d -o CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/NSDFWriter.cpp [ 50%] Building CXX object mesh/CMakeFiles/mesh.dir/NeuroNode.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/NeuroNode.cpp.o -MF CMakeFiles/mesh.dir/NeuroNode.cpp.o.d -o CMakeFiles/mesh.dir/NeuroNode.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/NeuroNode.cpp [ 50%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CaConcBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CaConcBase.cpp.o -MF CMakeFiles/biophysics.dir/CaConcBase.cpp.o.d -o CMakeFiles/biophysics.dir/CaConcBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CaConcBase.cpp [ 50%] Building CXX object mesh/CMakeFiles/mesh.dir/NeuroMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/NeuroMesh.cpp.o -MF CMakeFiles/mesh.dir/NeuroMesh.cpp.o.d -o CMakeFiles/mesh.dir/NeuroMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/NeuroMesh.cpp [ 51%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CaConc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/CaConc.cpp.o -MF CMakeFiles/biophysics.dir/CaConc.cpp.o.d -o CMakeFiles/biophysics.dir/CaConc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/CaConc.cpp [ 51%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o -MF CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o.d -o CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/HDF5DataWriter.cpp [ 51%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MgBlock.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MgBlock.cpp.o -MF CMakeFiles/biophysics.dir/MgBlock.cpp.o.d -o CMakeFiles/biophysics.dir/MgBlock.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MgBlock.cpp [ 52%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o -MF CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o.d -o CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/SpikeStats.cpp [ 52%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Nernst.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Nernst.cpp.o -MF CMakeFiles/biophysics.dir/Nernst.cpp.o.d -o CMakeFiles/biophysics.dir/Nernst.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Nernst.cpp [ 52%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o -MF CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o.d -o CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testBuiltins.cpp [ 52%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/testNSDF.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/external/muparser/include -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/scheduling -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT builtins/CMakeFiles/moose_builtins.dir/testNSDF.cpp.o -MF CMakeFiles/moose_builtins.dir/testNSDF.cpp.o.d -o CMakeFiles/moose_builtins.dir/testNSDF.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testNSDF.cpp [ 53%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Neuron.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Neuron.cpp.o -MF CMakeFiles/biophysics.dir/Neuron.cpp.o.d -o CMakeFiles/biophysics.dir/Neuron.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Neuron.cpp [ 53%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ReadCell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ReadCell.cpp.o -MF CMakeFiles/biophysics.dir/ReadCell.cpp.o.d -o CMakeFiles/biophysics.dir/ReadCell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ReadCell.cpp [ 54%] Linking CXX static library libmoose_builtins.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/cmake -P CMakeFiles/moose_builtins.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/builtins && /usr/bin/cmake -E cmake_link_script CMakeFiles/moose_builtins.dir/link.txt --verbose=1 /usr/bin/ar qc libmoose_builtins.a CMakeFiles/moose_builtins.dir/Arith.cpp.o CMakeFiles/moose_builtins.dir/Group.cpp.o CMakeFiles/moose_builtins.dir/Mstring.cpp.o CMakeFiles/moose_builtins.dir/Func.cpp.o CMakeFiles/moose_builtins.dir/Function.cpp.o CMakeFiles/moose_builtins.dir/Variable.cpp.o CMakeFiles/moose_builtins.dir/InputVariable.cpp.o CMakeFiles/moose_builtins.dir/TableBase.cpp.o CMakeFiles/moose_builtins.dir/Table.cpp.o CMakeFiles/moose_builtins.dir/Interpol.cpp.o CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o CMakeFiles/moose_builtins.dir/TimeTable.cpp.o CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o CMakeFiles/moose_builtins.dir/Streamer.cpp.o CMakeFiles/moose_builtins.dir/Stats.cpp.o CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o CMakeFiles/moose_builtins.dir/testNSDF.cpp.o /usr/bin/ranlib libmoose_builtins.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 54%] Built target moose_builtins /usr/bin/gmake -f mpi/CMakeFiles/moose_mpi.dir/build.make mpi/CMakeFiles/moose_mpi.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi/CMakeFiles/moose_mpi.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f mpi/CMakeFiles/moose_mpi.dir/build.make mpi/CMakeFiles/moose_mpi.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 54%] Building CXX object mpi/CMakeFiles/moose_mpi.dir/PostMaster.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mpi/CMakeFiles/moose_mpi.dir/PostMaster.cpp.o -MF CMakeFiles/moose_mpi.dir/PostMaster.cpp.o.d -o CMakeFiles/moose_mpi.dir/PostMaster.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/PostMaster.cpp [ 55%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SwcSegment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SwcSegment.cpp.o -MF CMakeFiles/biophysics.dir/SwcSegment.cpp.o.d -o CMakeFiles/biophysics.dir/SwcSegment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/SwcSegment.cpp [ 55%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ReadSwc.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/ReadSwc.cpp.o -MF CMakeFiles/biophysics.dir/ReadSwc.cpp.o.d -o CMakeFiles/biophysics.dir/ReadSwc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/ReadSwc.cpp [ 55%] Building CXX object mesh/CMakeFiles/mesh.dir/SpineEntry.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/SpineEntry.cpp.o -MF CMakeFiles/mesh.dir/SpineEntry.cpp.o.d -o CMakeFiles/mesh.dir/SpineEntry.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/SpineEntry.cpp [ 56%] Building CXX object mpi/CMakeFiles/moose_mpi.dir/testMpi.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mpi/CMakeFiles/moose_mpi.dir/testMpi.cpp.o -MF CMakeFiles/moose_mpi.dir/testMpi.cpp.o.d -o CMakeFiles/moose_mpi.dir/testMpi.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mpi/testMpi.cpp [ 56%] Linking CXX static library libmoose_mpi.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/cmake -P CMakeFiles/moose_mpi.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mpi && /usr/bin/cmake -E cmake_link_script CMakeFiles/moose_mpi.dir/link.txt --verbose=1 /usr/bin/ar qc libmoose_mpi.a CMakeFiles/moose_mpi.dir/PostMaster.cpp.o CMakeFiles/moose_mpi.dir/testMpi.cpp.o /usr/bin/ranlib libmoose_mpi.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 56%] Built target moose_mpi /usr/bin/gmake -f signeur/CMakeFiles/signeur.dir/build.make signeur/CMakeFiles/signeur.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur/CMakeFiles/signeur.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f signeur/CMakeFiles/signeur.dir/build.make signeur/CMakeFiles/signeur.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 57%] Building CXX object signeur/CMakeFiles/signeur.dir/Adaptor.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../kinetics -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT signeur/CMakeFiles/signeur.dir/Adaptor.cpp.o -MF CMakeFiles/signeur.dir/Adaptor.cpp.o.d -o CMakeFiles/signeur.dir/Adaptor.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/Adaptor.cpp [ 57%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SynChan.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/SynChan.cpp.o -MF CMakeFiles/biophysics.dir/SynChan.cpp.o.d -o CMakeFiles/biophysics.dir/SynChan.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/SynChan.cpp [ 58%] Building CXX object mesh/CMakeFiles/mesh.dir/SpineMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/SpineMesh.cpp.o -MF CMakeFiles/mesh.dir/SpineMesh.cpp.o.d -o CMakeFiles/mesh.dir/SpineMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/SpineMesh.cpp [ 58%] Building CXX object signeur/CMakeFiles/signeur.dir/testSigNeur.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/../kinetics -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT signeur/CMakeFiles/signeur.dir/testSigNeur.cpp.o -MF CMakeFiles/signeur.dir/testSigNeur.cpp.o.d -o CMakeFiles/signeur.dir/testSigNeur.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/signeur/testSigNeur.cpp [ 58%] Linking CXX static library libsigneur.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur && /usr/bin/cmake -P CMakeFiles/signeur.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/signeur && /usr/bin/cmake -E cmake_link_script CMakeFiles/signeur.dir/link.txt --verbose=1 /usr/bin/ar qc libsigneur.a CMakeFiles/signeur.dir/Adaptor.cpp.o CMakeFiles/signeur.dir/testSigNeur.cpp.o /usr/bin/ranlib libsigneur.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 58%] Built target signeur /usr/bin/gmake -f ksolve/CMakeFiles/ksolve.dir/build.make ksolve/CMakeFiles/ksolve.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve/CMakeFiles/ksolve.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f ksolve/CMakeFiles/ksolve.dir/build.make ksolve/CMakeFiles/ksolve.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 58%] Building CXX object ksolve/CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o -MF CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o.d -o CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/KinSparseMatrix.cpp [ 59%] Building CXX object biophysics/CMakeFiles/biophysics.dir/NMDAChan.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/NMDAChan.cpp.o -MF CMakeFiles/biophysics.dir/NMDAChan.cpp.o.d -o CMakeFiles/biophysics.dir/NMDAChan.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/NMDAChan.cpp [ 60%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombiePool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombiePool.cpp.o -MF CMakeFiles/ksolve.dir/ZombiePool.cpp.o.d -o CMakeFiles/ksolve.dir/ZombiePool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombiePool.cpp [ 60%] Building CXX object mesh/CMakeFiles/mesh.dir/PsdMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/PsdMesh.cpp.o -MF CMakeFiles/mesh.dir/PsdMesh.cpp.o.d -o CMakeFiles/mesh.dir/PsdMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/PsdMesh.cpp [ 60%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieFunction.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieFunction.cpp.o -MF CMakeFiles/ksolve.dir/ZombieFunction.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieFunction.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieFunction.cpp [ 60%] Building CXX object biophysics/CMakeFiles/biophysics.dir/testBiophysics.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/testBiophysics.cpp.o -MF CMakeFiles/biophysics.dir/testBiophysics.cpp.o.d -o CMakeFiles/biophysics.dir/testBiophysics.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/testBiophysics.cpp [ 60%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o -MF CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieBufPool.cpp [ 61%] Building CXX object biophysics/CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o -MF CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o.d -o CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/IzhikevichNrn.cpp [ 61%] Building CXX object biophysics/CMakeFiles/biophysics.dir/DifShell.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/DifShell.cpp.o -MF CMakeFiles/biophysics.dir/DifShell.cpp.o.d -o CMakeFiles/biophysics.dir/DifShell.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/DifShell.cpp [ 62%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieReac.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieReac.cpp.o -MF CMakeFiles/ksolve.dir/ZombieReac.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieReac.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieReac.cpp [ 62%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieEnz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieEnz.cpp.o -MF CMakeFiles/ksolve.dir/ZombieEnz.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieEnz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieEnz.cpp [ 63%] Building CXX object mesh/CMakeFiles/mesh.dir/testMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT mesh/CMakeFiles/mesh.dir/testMesh.cpp.o -MF CMakeFiles/mesh.dir/testMesh.cpp.o.d -o CMakeFiles/mesh.dir/testMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/mesh/testMesh.cpp [ 63%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o -MF CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o.d -o CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombieMMenz.cpp [ 63%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Leakage.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Leakage.cpp.o -MF CMakeFiles/biophysics.dir/Leakage.cpp.o.d -o CMakeFiles/biophysics.dir/Leakage.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Leakage.cpp [ 64%] Building CXX object ksolve/CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o -MF CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o.d -o CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/VoxelPoolsBase.cpp [ 65%] Building CXX object biophysics/CMakeFiles/biophysics.dir/VectorTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/VectorTable.cpp.o -MF CMakeFiles/biophysics.dir/VectorTable.cpp.o.d -o CMakeFiles/biophysics.dir/VectorTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/VectorTable.cpp [ 65%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o -MF CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovRateTable.cpp [ 65%] Linking CXX static library libmesh.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/cmake -P CMakeFiles/mesh.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mesh.dir/link.txt --verbose=1 /usr/bin/ar qc libmesh.a CMakeFiles/mesh.dir/ChemCompt.cpp.o CMakeFiles/mesh.dir/MeshCompt.cpp.o CMakeFiles/mesh.dir/MeshEntry.cpp.o CMakeFiles/mesh.dir/CubeMesh.cpp.o CMakeFiles/mesh.dir/CylBase.cpp.o CMakeFiles/mesh.dir/CylMesh.cpp.o CMakeFiles/mesh.dir/NeuroNode.cpp.o CMakeFiles/mesh.dir/NeuroMesh.cpp.o CMakeFiles/mesh.dir/SpineEntry.cpp.o CMakeFiles/mesh.dir/SpineMesh.cpp.o CMakeFiles/mesh.dir/PsdMesh.cpp.o CMakeFiles/mesh.dir/testMesh.cpp.o /usr/bin/ranlib libmesh.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 65%] Built target mesh /usr/bin/gmake -f hsolve/CMakeFiles/hsolve.dir/build.make hsolve/CMakeFiles/hsolve.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve/CMakeFiles/hsolve.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f hsolve/CMakeFiles/hsolve.dir/build.make hsolve/CMakeFiles/hsolve.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 66%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveStruct.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveStruct.cpp.o -MF CMakeFiles/hsolve.dir/HSolveStruct.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveStruct.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveStruct.cpp [ 66%] Building CXX object ksolve/CMakeFiles/ksolve.dir/VoxelPools.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/VoxelPools.cpp.o -MF CMakeFiles/ksolve.dir/VoxelPools.cpp.o.d -o CMakeFiles/ksolve.dir/VoxelPools.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/VoxelPools.cpp [ 66%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HinesMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HinesMatrix.cpp.o -MF CMakeFiles/hsolve.dir/HinesMatrix.cpp.o.d -o CMakeFiles/hsolve.dir/HinesMatrix.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HinesMatrix.cpp [ 67%] Building CXX object ksolve/CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o -MF CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o.d -o CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/GssaVoxelPools.cpp [ 67%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovChannel.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovChannel.cpp.o -MF CMakeFiles/biophysics.dir/MarkovChannel.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovChannel.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovChannel.cpp [ 68%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolvePassive.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolvePassive.cpp.o -MF CMakeFiles/hsolve.dir/HSolvePassive.cpp.o.d -o CMakeFiles/hsolve.dir/HSolvePassive.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolvePassive.cpp [ 68%] Building CXX object ksolve/CMakeFiles/ksolve.dir/RateTerm.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/RateTerm.cpp.o -MF CMakeFiles/ksolve.dir/RateTerm.cpp.o.d -o CMakeFiles/ksolve.dir/RateTerm.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/RateTerm.cpp [ 68%] Building CXX object ksolve/CMakeFiles/ksolve.dir/FuncTerm.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/FuncTerm.cpp.o -MF CMakeFiles/ksolve.dir/FuncTerm.cpp.o.d -o CMakeFiles/ksolve.dir/FuncTerm.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/FuncTerm.cpp [ 68%] Building CXX object hsolve/CMakeFiles/hsolve.dir/RateLookup.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/RateLookup.cpp.o -MF CMakeFiles/hsolve.dir/RateLookup.cpp.o.d -o CMakeFiles/hsolve.dir/RateLookup.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/RateLookup.cpp [ 68%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveActive.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveActive.cpp.o -MF CMakeFiles/hsolve.dir/HSolveActive.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveActive.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveActive.cpp [ 69%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MatrixOps.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MatrixOps.cpp.o -MF CMakeFiles/biophysics.dir/MatrixOps.cpp.o.d -o CMakeFiles/biophysics.dir/MatrixOps.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MatrixOps.cpp [ 70%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Stoich.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/Stoich.cpp.o -MF CMakeFiles/ksolve.dir/Stoich.cpp.o.d -o CMakeFiles/ksolve.dir/Stoich.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/Stoich.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MatrixOps.cpp: In function ‘matMatAdd(std::vector >, std::allocator > > >*, std::vector >, std::allocator > > >*, double, double, unsigned int)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MatrixOps.cpp:128:17: warning: ‘C’ may be used uninitialized [-Wmaybe-uninitialized] 128 | Matrix *C; | ^ [ 70%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Ksolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/Ksolve.cpp.o -MF CMakeFiles/ksolve.dir/Ksolve.cpp.o.d -o CMakeFiles/ksolve.dir/Ksolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/Ksolve.cpp [ 71%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o -MF CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveActiveSetup.cpp [ 71%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o -MF CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolverBase.cpp [ 71%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveInterface.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveInterface.cpp.o -MF CMakeFiles/hsolve.dir/HSolveInterface.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveInterface.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveInterface.cpp [ 72%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolve.cpp.o -MF CMakeFiles/hsolve.dir/HSolve.cpp.o.d -o CMakeFiles/hsolve.dir/HSolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp: In member function ‘void HSolve::zombify(Eref) const’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:218:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 218 | for ( i = compartmentId_.begin(); i != compartmentId_.end(); ++i ) | ^~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:222:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 222 | temp.clear(); | ^~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:226:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 226 | for ( i = caConcId_.begin(); i != caConcId_.end(); ++i ) | ^~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolve.cpp:229:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 229 | temp.clear(); | ^~~~ [ 73%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovSolver.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovSolver.cpp.o -MF CMakeFiles/biophysics.dir/MarkovSolver.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovSolver.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp [ 74%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Gsolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/Gsolve.cpp.o -MF CMakeFiles/ksolve.dir/Gsolve.cpp.o.d -o CMakeFiles/ksolve.dir/Gsolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/Gsolve.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp: In member function ‘MarkovSolver::computePadeApproximant(std::vector >, std::allocator > > >*, unsigned int)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:211:27: warning: ‘U’ may be used uninitialized [-Wmaybe-uninitialized] 211 | VplusU = matMatAdd( U, V, 1.0, 1.0 ); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:84:17: note: ‘U’ was declared here 84 | Matrix *U, *V, *VplusU, *VminusU, *invVminusU, *Qpower; | ^ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:211:27: warning: ‘V’ may be used uninitialized [-Wmaybe-uninitialized] 211 | VplusU = matMatAdd( U, V, 1.0, 1.0 ); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovSolver.cpp:84:21: note: ‘V’ was declared here 84 | Matrix *U, *V, *VplusU, *VminusU, *invVminusU, *Qpower; | ^ [ 74%] Building CXX object biophysics/CMakeFiles/biophysics.dir/VClamp.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/VClamp.cpp.o -MF CMakeFiles/biophysics.dir/VClamp.cpp.o.d -o CMakeFiles/biophysics.dir/VClamp.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/VClamp.cpp [ 74%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o -MF CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o.d -o CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/ZombiePoolInterface.cpp [ 74%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Spine.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/Spine.cpp.o -MF CMakeFiles/biophysics.dir/Spine.cpp.o.d -o CMakeFiles/biophysics.dir/Spine.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/Spine.cpp [ 74%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveUtils.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/HSolveUtils.cpp.o -MF CMakeFiles/hsolve.dir/HSolveUtils.cpp.o.d -o CMakeFiles/hsolve.dir/HSolveUtils.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/HSolveUtils.cpp [ 74%] Building CXX object ksolve/CMakeFiles/ksolve.dir/testKsolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT ksolve/CMakeFiles/ksolve.dir/testKsolve.cpp.o -MF CMakeFiles/ksolve.dir/testKsolve.cpp.o.d -o CMakeFiles/ksolve.dir/testKsolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/testKsolve.cpp [ 75%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../synapse -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT biophysics/CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o -MF CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o.d -o CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/biophysics/MarkovGslSolver.cpp [ 75%] Building CXX object hsolve/CMakeFiles/hsolve.dir/testHSolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/testHSolve.cpp.o -MF CMakeFiles/hsolve.dir/testHSolve.cpp.o.d -o CMakeFiles/hsolve.dir/testHSolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/testHSolve.cpp [ 76%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o -MF CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o.d -o CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/ZombieCompartment.cpp [ 77%] Building CXX object ksolve/CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../builtins -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/.. -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../mesh -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/ksolve/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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-DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o -MF CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o.d -o CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/ZombieCaConc.cpp [ 78%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/../external/debug -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT hsolve/CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o -MF CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o.d -o CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/hsolve/ZombieHHChannel.cpp [ 78%] Linking CXX static library libhsolve.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/cmake -P CMakeFiles/hsolve.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/hsolve && /usr/bin/cmake -E cmake_link_script CMakeFiles/hsolve.dir/link.txt --verbose=1 /usr/bin/ar qc libhsolve.a CMakeFiles/hsolve.dir/HSolveStruct.cpp.o CMakeFiles/hsolve.dir/HinesMatrix.cpp.o CMakeFiles/hsolve.dir/HSolvePassive.cpp.o CMakeFiles/hsolve.dir/RateLookup.cpp.o CMakeFiles/hsolve.dir/HSolveActive.cpp.o CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o CMakeFiles/hsolve.dir/HSolveInterface.cpp.o CMakeFiles/hsolve.dir/HSolve.cpp.o CMakeFiles/hsolve.dir/HSolveUtils.cpp.o CMakeFiles/hsolve.dir/testHSolve.cpp.o CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o /usr/bin/ranlib libhsolve.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 78%] Built target hsolve /usr/bin/gmake -f diffusion/CMakeFiles/diffusion.dir/build.make diffusion/CMakeFiles/diffusion.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion/CMakeFiles/diffusion.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f diffusion/CMakeFiles/diffusion.dir/build.make diffusion/CMakeFiles/diffusion.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 78%] Building CXX object diffusion/CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o -MF CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o.d -o CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/FastMatrixElim.cpp [ 78%] Building CXX object diffusion/CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o -MF CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o.d -o CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/DiffPoolVec.cpp [ 78%] Linking CXX static library libbiophysics.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/cmake -P CMakeFiles/biophysics.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/biophysics && /usr/bin/cmake -E cmake_link_script CMakeFiles/biophysics.dir/link.txt --verbose=1 /usr/bin/ar qc libbiophysics.a CMakeFiles/biophysics.dir/IntFire.cpp.o CMakeFiles/biophysics.dir/SpikeGen.cpp.o CMakeFiles/biophysics.dir/RandSpike.cpp.o CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o CMakeFiles/biophysics.dir/CompartmentBase.cpp.o CMakeFiles/biophysics.dir/Compartment.cpp.o CMakeFiles/biophysics.dir/SymCompartment.cpp.o CMakeFiles/biophysics.dir/GapJunction.cpp.o CMakeFiles/biophysics.dir/ChanBase.cpp.o CMakeFiles/biophysics.dir/ChanCommon.cpp.o CMakeFiles/biophysics.dir/HHChannel.cpp.o CMakeFiles/biophysics.dir/HHChannelBase.cpp.o CMakeFiles/biophysics.dir/HHChannel2D.cpp.o CMakeFiles/biophysics.dir/HHGate.cpp.o CMakeFiles/biophysics.dir/HHGate2D.cpp.o CMakeFiles/biophysics.dir/CaConcBase.cpp.o CMakeFiles/biophysics.dir/CaConc.cpp.o CMakeFiles/biophysics.dir/MgBlock.cpp.o CMakeFiles/biophysics.dir/Nernst.cpp.o CMakeFiles/biophysics.dir/Neuron.cpp.o CMakeFiles/biophysics.dir/ReadCell.cpp.o CMakeFiles/biophysics.dir/SwcSegment.cpp.o CMakeFiles/biophysics.dir/ReadSwc.cpp.o CMakeFiles/biophysics.dir/SynChan.cpp.o CMakeFiles/biophysics.dir/NMDAChan.cpp.o CMakeFiles/biophysics.dir/testBiophysics.cpp.o CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o CMakeFiles/biophysics.dir/DifShell.cpp.o CMakeFiles/biophysics.dir/Leakage.cpp.o CMakeFiles/biophysics.dir/VectorTable.cpp.o CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o CMakeFiles/biophysics.dir/MarkovChannel.cpp.o CMakeFiles/biophysics.dir/MatrixOps.cpp.o CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o CMakeFiles/biophysics.dir/MarkovSolver.cpp.o CMakeFiles/biophysics.dir/VClamp.cpp.o CMakeFiles/biophysics.dir/Spine.cpp.o CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o /usr/bin/ranlib libbiophysics.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 78%] Built target biophysics /usr/bin/gmake -f device/CMakeFiles/device.dir/build.make device/CMakeFiles/device.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device/CMakeFiles/device.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f device/CMakeFiles/device.dir/build.make device/CMakeFiles/device.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 78%] Building CXX object device/CMakeFiles/device.dir/PulseGen.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/PulseGen.cpp.o -MF CMakeFiles/device.dir/PulseGen.cpp.o.d -o CMakeFiles/device.dir/PulseGen.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/PulseGen.cpp [ 79%] Building CXX object diffusion/CMakeFiles/diffusion.dir/Dsolve.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/Dsolve.cpp.o -MF CMakeFiles/diffusion.dir/Dsolve.cpp.o.d -o CMakeFiles/diffusion.dir/Dsolve.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/Dsolve.cpp [ 79%] Building CXX object diffusion/CMakeFiles/diffusion.dir/testDiffusion.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/../ksolve -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT diffusion/CMakeFiles/diffusion.dir/testDiffusion.cpp.o -MF CMakeFiles/diffusion.dir/testDiffusion.cpp.o.d -o CMakeFiles/diffusion.dir/testDiffusion.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/diffusion/testDiffusion.cpp [ 79%] Building CXX object device/CMakeFiles/device.dir/DiffAmp.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/DiffAmp.cpp.o -MF CMakeFiles/device.dir/DiffAmp.cpp.o.d -o CMakeFiles/device.dir/DiffAmp.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/DiffAmp.cpp [ 79%] Linking CXX static library libksolve.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/cmake -P CMakeFiles/ksolve.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/ksolve && /usr/bin/cmake -E cmake_link_script CMakeFiles/ksolve.dir/link.txt --verbose=1 /usr/bin/ar qc libksolve.a CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o CMakeFiles/ksolve.dir/ZombiePool.cpp.o CMakeFiles/ksolve.dir/ZombieFunction.cpp.o CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o CMakeFiles/ksolve.dir/ZombieReac.cpp.o CMakeFiles/ksolve.dir/ZombieEnz.cpp.o CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o CMakeFiles/ksolve.dir/VoxelPools.cpp.o CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o CMakeFiles/ksolve.dir/RateTerm.cpp.o CMakeFiles/ksolve.dir/FuncTerm.cpp.o CMakeFiles/ksolve.dir/Stoich.cpp.o CMakeFiles/ksolve.dir/Ksolve.cpp.o CMakeFiles/ksolve.dir/Gsolve.cpp.o CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o CMakeFiles/ksolve.dir/testKsolve.cpp.o CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o /usr/bin/ranlib libksolve.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 79%] Built target ksolve /usr/bin/gmake -f benchmarks/CMakeFiles/benchmarks.dir/build.make benchmarks/CMakeFiles/benchmarks.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks 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-I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT benchmarks/CMakeFiles/benchmarks.dir/benchmarks.cpp.o -MF CMakeFiles/benchmarks.dir/benchmarks.cpp.o.d -o CMakeFiles/benchmarks.dir/benchmarks.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/benchmarks.cpp [ 80%] Building CXX object benchmarks/CMakeFiles/benchmarks.dir/kineticMarks.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/../basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT benchmarks/CMakeFiles/benchmarks.dir/kineticMarks.cpp.o -MF CMakeFiles/benchmarks.dir/kineticMarks.cpp.o.d -o CMakeFiles/benchmarks.dir/kineticMarks.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/benchmarks/kineticMarks.cpp [ 80%] Linking CXX static library libbenchmarks.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/cmake -P CMakeFiles/benchmarks.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/benchmarks && /usr/bin/cmake -E cmake_link_script CMakeFiles/benchmarks.dir/link.txt --verbose=1 /usr/bin/ar qc libbenchmarks.a CMakeFiles/benchmarks.dir/benchmarks.cpp.o CMakeFiles/benchmarks.dir/kineticMarks.cpp.o /usr/bin/ranlib libbenchmarks.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 80%] Built target benchmarks /usr/bin/gmake -f kinetics/CMakeFiles/kinetics.dir/build.make kinetics/CMakeFiles/kinetics.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics/CMakeFiles/kinetics.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f kinetics/CMakeFiles/kinetics.dir/build.make kinetics/CMakeFiles/kinetics.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 81%] Building CXX object kinetics/CMakeFiles/kinetics.dir/PoolBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/PoolBase.cpp.o -MF CMakeFiles/kinetics.dir/PoolBase.cpp.o.d -o CMakeFiles/kinetics.dir/PoolBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/PoolBase.cpp [ 82%] Building CXX object device/CMakeFiles/device.dir/PIDController.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/g++ 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT device/CMakeFiles/device.dir/RC.cpp.o -MF CMakeFiles/device.dir/RC.cpp.o.d -o CMakeFiles/device.dir/RC.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/device/RC.cpp [ 82%] Linking CXX static library libdiffusion.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/cmake -P CMakeFiles/diffusion.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/diffusion.dir/link.txt --verbose=1 /usr/bin/ar qc libdiffusion.a CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o CMakeFiles/diffusion.dir/Dsolve.cpp.o CMakeFiles/diffusion.dir/testDiffusion.cpp.o /usr/bin/ranlib libdiffusion.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 82%] Built target diffusion /usr/bin/gmake -f synapse/CMakeFiles/synapse.dir/build.make synapse/CMakeFiles/synapse.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse/CMakeFiles/synapse.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f synapse/CMakeFiles/synapse.dir/build.make synapse/CMakeFiles/synapse.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 83%] Building CXX object synapse/CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o -MF CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o.d -o CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/GraupnerBrunel2012CaPlasticitySynHandler.cpp [ 83%] Building CXX object synapse/CMakeFiles/synapse.dir/RollingMatrix.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/RollingMatrix.cpp.o -MF CMakeFiles/synapse.dir/RollingMatrix.cpp.o.d -o CMakeFiles/synapse.dir/RollingMatrix.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/RollingMatrix.cpp [ 84%] Linking CXX static library libdevice.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/cmake -P CMakeFiles/device.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/device && /usr/bin/cmake -E cmake_link_script CMakeFiles/device.dir/link.txt --verbose=1 /usr/bin/ar qc libdevice.a CMakeFiles/device.dir/PulseGen.cpp.o CMakeFiles/device.dir/DiffAmp.cpp.o CMakeFiles/device.dir/PIDController.cpp.o CMakeFiles/device.dir/RC.cpp.o /usr/bin/ranlib libdevice.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 84%] Built target device [ 85%] Building CXX object synapse/CMakeFiles/synapse.dir/STDPSynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/STDPSynHandler.cpp.o -MF CMakeFiles/synapse.dir/STDPSynHandler.cpp.o.d -o CMakeFiles/synapse.dir/STDPSynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/STDPSynHandler.cpp [ 85%] Building CXX object synapse/CMakeFiles/synapse.dir/STDPSynapse.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/STDPSynapse.cpp.o -MF CMakeFiles/synapse.dir/STDPSynapse.cpp.o.d -o CMakeFiles/synapse.dir/STDPSynapse.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/STDPSynapse.cpp [ 85%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Pool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Pool.cpp.o -MF CMakeFiles/kinetics.dir/Pool.cpp.o.d -o CMakeFiles/kinetics.dir/Pool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Pool.cpp [ 86%] Building CXX object kinetics/CMakeFiles/kinetics.dir/BufPool.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/BufPool.cpp.o -MF CMakeFiles/kinetics.dir/BufPool.cpp.o.d -o CMakeFiles/kinetics.dir/BufPool.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/BufPool.cpp [ 86%] Building CXX object synapse/CMakeFiles/synapse.dir/SeqSynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/SeqSynHandler.cpp.o -MF CMakeFiles/synapse.dir/SeqSynHandler.cpp.o.d -o CMakeFiles/synapse.dir/SeqSynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/SeqSynHandler.cpp [ 86%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReacBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/ReacBase.cpp.o -MF CMakeFiles/kinetics.dir/ReacBase.cpp.o.d -o CMakeFiles/kinetics.dir/ReacBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/ReacBase.cpp [ 87%] Building CXX object synapse/CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o -MF CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o.d -o CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/SimpleSynHandler.cpp [ 87%] Building CXX object synapse/CMakeFiles/synapse.dir/SynHandlerBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/SynHandlerBase.cpp.o -MF CMakeFiles/synapse.dir/SynHandlerBase.cpp.o.d -o CMakeFiles/synapse.dir/SynHandlerBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/SynHandlerBase.cpp [ 88%] Building CXX object synapse/CMakeFiles/synapse.dir/Synapse.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/Synapse.cpp.o -MF CMakeFiles/synapse.dir/Synapse.cpp.o.d -o CMakeFiles/synapse.dir/Synapse.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/Synapse.cpp [ 88%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Reac.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Reac.cpp.o -MF CMakeFiles/kinetics.dir/Reac.cpp.o.d -o CMakeFiles/kinetics.dir/Reac.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Reac.cpp [ 88%] Building CXX object synapse/CMakeFiles/synapse.dir/testSynapse.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../utility -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../kinetics -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/../external/muparser/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT synapse/CMakeFiles/synapse.dir/testSynapse.cpp.o -MF CMakeFiles/synapse.dir/testSynapse.cpp.o.d -o CMakeFiles/synapse.dir/testSynapse.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/synapse/testSynapse.cpp [ 89%] Building CXX object kinetics/CMakeFiles/kinetics.dir/EnzBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/EnzBase.cpp.o -MF CMakeFiles/kinetics.dir/EnzBase.cpp.o.d -o CMakeFiles/kinetics.dir/EnzBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/EnzBase.cpp [ 89%] Building CXX object kinetics/CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o -MF CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o.d -o CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/CplxEnzBase.cpp [ 90%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Enz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Enz.cpp.o -MF CMakeFiles/kinetics.dir/Enz.cpp.o.d -o CMakeFiles/kinetics.dir/Enz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Enz.cpp [ 90%] Linking CXX static library libsynapse.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/cmake -P CMakeFiles/synapse.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/synapse && /usr/bin/cmake -E cmake_link_script CMakeFiles/synapse.dir/link.txt --verbose=1 /usr/bin/ar qc libsynapse.a CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o CMakeFiles/synapse.dir/RollingMatrix.cpp.o CMakeFiles/synapse.dir/STDPSynHandler.cpp.o CMakeFiles/synapse.dir/STDPSynapse.cpp.o CMakeFiles/synapse.dir/SeqSynHandler.cpp.o CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o CMakeFiles/synapse.dir/SynHandlerBase.cpp.o CMakeFiles/synapse.dir/Synapse.cpp.o CMakeFiles/synapse.dir/testSynapse.cpp.o /usr/bin/ranlib libsynapse.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 90%] Built target synapse [ 90%] Building CXX object kinetics/CMakeFiles/kinetics.dir/MMenz.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/MMenz.cpp.o -MF CMakeFiles/kinetics.dir/MMenz.cpp.o.d -o CMakeFiles/kinetics.dir/MMenz.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/MMenz.cpp [ 90%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Species.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/Species.cpp.o -MF CMakeFiles/kinetics.dir/Species.cpp.o.d -o CMakeFiles/kinetics.dir/Species.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/Species.cpp [ 91%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReadKkit.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/ReadKkit.cpp.o -MF CMakeFiles/kinetics.dir/ReadKkit.cpp.o.d -o CMakeFiles/kinetics.dir/ReadKkit.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/ReadKkit.cpp [ 91%] Building CXX object kinetics/CMakeFiles/kinetics.dir/WriteKkit.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/WriteKkit.cpp.o -MF CMakeFiles/kinetics.dir/WriteKkit.cpp.o.d -o CMakeFiles/kinetics.dir/WriteKkit.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp: In function ‘void writePlot(std::ofstream&, Id, std::string, std::string, double, double)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:281:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 281 | if ( pos == string::npos ) | ^~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:283:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 283 | if ( pos == string::npos ) | ^~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp: In function ‘void storePlotMsgs(Id, std::vector >&, Id, std::string, Id)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:422:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 422 | if ( pos == string::npos ) | ^~ In file included from /usr/include/c++/14/cassert:44, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/header.h:29, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:15: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/WriteKkit.cpp:424:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 424 | assert( pos != string::npos ); | ^~~~~~ [ 92%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReadCspace.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/ReadCspace.cpp.o -MF CMakeFiles/kinetics.dir/ReadCspace.cpp.o.d -o CMakeFiles/kinetics.dir/ReadCspace.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/ReadCspace.cpp [ 92%] Building CXX object kinetics/CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o -MF CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o.d -o CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/lookupVolumeFromMesh.cpp [ 92%] Building CXX object kinetics/CMakeFiles/kinetics.dir/testKinetics.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/../utility -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT kinetics/CMakeFiles/kinetics.dir/testKinetics.cpp.o -MF CMakeFiles/kinetics.dir/testKinetics.cpp.o.d -o CMakeFiles/kinetics.dir/testKinetics.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/kinetics/testKinetics.cpp [ 93%] Linking CXX static library libkinetics.a cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/cmake -P CMakeFiles/kinetics.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/kinetics && /usr/bin/cmake -E cmake_link_script CMakeFiles/kinetics.dir/link.txt --verbose=1 /usr/bin/ar qc libkinetics.a CMakeFiles/kinetics.dir/PoolBase.cpp.o CMakeFiles/kinetics.dir/Pool.cpp.o CMakeFiles/kinetics.dir/BufPool.cpp.o CMakeFiles/kinetics.dir/ReacBase.cpp.o CMakeFiles/kinetics.dir/Reac.cpp.o CMakeFiles/kinetics.dir/EnzBase.cpp.o CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o CMakeFiles/kinetics.dir/Enz.cpp.o CMakeFiles/kinetics.dir/MMenz.cpp.o CMakeFiles/kinetics.dir/Species.cpp.o CMakeFiles/kinetics.dir/ReadKkit.cpp.o CMakeFiles/kinetics.dir/WriteKkit.cpp.o CMakeFiles/kinetics.dir/ReadCspace.cpp.o CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o CMakeFiles/kinetics.dir/testKinetics.cpp.o /usr/bin/ranlib libkinetics.a gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 93%] Built target kinetics /usr/bin/gmake -f CMakeFiles/libmoose.dir/build.make CMakeFiles/libmoose.dir/depend /usr/bin/gmake -f pymoose/CMakeFiles/_moose.dir/build.make pymoose/CMakeFiles/_moose.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/libmoose.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose/CMakeFiles/_moose.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/libmoose.dir/build.make CMakeFiles/libmoose.dir/build /usr/bin/gmake -f pymoose/CMakeFiles/_moose.dir/build.make pymoose/CMakeFiles/_moose.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 94%] Building CXX object pymoose/CMakeFiles/_moose.dir/mfield.cpp.o [ 94%] Building CXX object pymoose/CMakeFiles/_moose.dir/vec.cpp.o [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/moosemodule.cpp.o [ 95%] Building CXX object CMakeFiles/libmoose.dir/basecode/main.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 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-mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.12 -I/usr/include/python3.12 -MD -MT pymoose/CMakeFiles/_moose.dir/vec.cpp.o -MF CMakeFiles/_moose.dir/vec.cpp.o.d -o CMakeFiles/_moose.dir/vec.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/vec.cpp /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_LIB -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -Dlibmoose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT CMakeFiles/libmoose.dir/basecode/main.cpp.o -MF CMakeFiles/libmoose.dir/basecode/main.cpp.o.d -o CMakeFiles/libmoose.dir/basecode/main.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/main.cpp cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.12/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.12 -I/usr/include/python3.12 -MD -MT pymoose/CMakeFiles/_moose.dir/moosemodule.cpp.o -MF CMakeFiles/_moose.dir/moosemodule.cpp.o.d -o CMakeFiles/_moose.dir/moosemodule.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.12/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.12 -I/usr/include/python3.12 -MD -MT pymoose/CMakeFiles/_moose.dir/mfield.cpp.o -MF CMakeFiles/_moose.dir/mfield.cpp.o.d -o CMakeFiles/_moose.dir/mfield.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/mfield.cpp [ 95%] Linking CXX shared library libmoose.so /usr/bin/cmake -E cmake_link_script CMakeFiles/libmoose.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libmoose.so -o libmoose.so CMakeFiles/libmoose.dir/basecode/main.cpp.o -L/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build -Wl,--whole-archive external/muparser/libmuparser.a builtins/libmoose_builtins.a msg/libmsg.a benchmarks/libbenchmarks.a shell/libshell.a randnum/librandnum.a scheduling/libscheduling.a mpi/libmoose_mpi.a biophysics/libbiophysics.a utility/libutility.a kinetics/libkinetics.a synapse/libsynapse.a intfire/libintfire.a hsolve/libhsolve.a mesh/libmesh.a signeur/libsigneur.a diffusion/libdiffusion.a ksolve/libksolve.a device/libdevice.a basecode/libbasecode.a -Wl,--no-whole-archive -lhdf5_cpp -lhdf5 -lhdf5_hl_cpp -lhdf5_hl -lgsl -lgslcblas In file included from /usr/include/c++/14/aarch64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /usr/include/c++/14/iostream:41, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:42: In member function ‘std::__new_allocator::construct(PyGetSetDef*, PyGetSetDef const&)void’, inlined from ‘std::allocator_traits >::construct(std::allocator&, PyGetSetDef*, PyGetSetDef const&)void’ at /usr/include/c++/14/bits/alloc_traits.h:534:17, inlined from ‘std::vector >::push_back(PyGetSetDef const&)’ at /usr/include/c++/14/bits/stl_vector.h:1288:30, inlined from ‘defineLookupFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2821:46: /usr/include/c++/14/bits/new_allocator.h:191:11: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp: In function ‘defineLookupFinfos(Cinfo const*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2820:21: note: ‘getset’ declared here 2820 | PyGetSetDef getset; | ^~~~~~ In file included from /usr/include/c++/14/vector:66, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../utility/print_function.hpp:29, from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:60: In member function ‘std::vector >::push_back(PyGetSetDef const&)’, inlined from ‘defineLookupFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2821:46: /usr/include/c++/14/bits/stl_vector.h:1294:28: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 1294 | _M_realloc_append(__x); | ~~~~~~~~~~~~~~~~~^~~~~ In file included from /usr/include/c++/14/vector:72: /usr/include/c++/14/bits/vector.tcc: In function ‘defineLookupFinfos(Cinfo const*)’: /usr/include/c++/14/bits/vector.tcc:581:7: note: by argument 2 of type ‘const struct PyGetSetDef &’ to ‘std::vector >::_M_realloc_append(PyGetSetDef const&)void’ declared here 581 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2820:21: note: ‘getset’ declared here 2820 | PyGetSetDef getset; | ^~~~~~ In member function ‘std::__new_allocator::construct(PyGetSetDef*, PyGetSetDef const&)void’, inlined from ‘std::allocator_traits >::construct(std::allocator&, PyGetSetDef*, PyGetSetDef const&)void’ at /usr/include/c++/14/bits/alloc_traits.h:534:17, inlined from ‘std::vector >::push_back(PyGetSetDef const&)’ at /usr/include/c++/14/bits/stl_vector.h:1288:30, inlined from ‘defineElementFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2897:46: /usr/include/c++/14/bits/new_allocator.h:191:11: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp: In function ‘defineElementFinfos(Cinfo const*)’: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2896:21: note: ‘getset’ declared here 2896 | PyGetSetDef getset; | ^~~~~~ In member function ‘std::vector >::push_back(PyGetSetDef const&)’, inlined from ‘defineElementFinfos(Cinfo const*)’ at /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2897:46: /usr/include/c++/14/bits/stl_vector.h:1294:28: warning: ‘getset’ may be used uninitialized [-Wmaybe-uninitialized] 1294 | _M_realloc_append(__x); | ~~~~~~~~~~~~~~~~~^~~~~ /usr/include/c++/14/bits/vector.tcc: In function ‘defineElementFinfos(Cinfo const*)’: /usr/include/c++/14/bits/vector.tcc:581:7: note: by argument 2 of type ‘const struct PyGetSetDef &’ to ‘std::vector >::_M_realloc_append(PyGetSetDef const&)void’ declared here 581 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/moosemodule.cpp:2896:21: note: ‘getset’ declared here 2896 | PyGetSetDef getset; | ^~~~~~ [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/pymooseinit.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.12/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.12 -I/usr/include/python3.12 -MD -MT pymoose/CMakeFiles/_moose.dir/pymooseinit.cpp.o -MF CMakeFiles/_moose.dir/pymooseinit.cpp.o.d -o CMakeFiles/_moose.dir/pymooseinit.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/pymooseinit.cpp [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/melement.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.12/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.12 -I/usr/include/python3.12 -MD -MT pymoose/CMakeFiles/_moose.dir/melement.cpp.o -MF CMakeFiles/_moose.dir/melement.cpp.o.d -o CMakeFiles/_moose.dir/melement.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/melement.cpp [ 96%] Building CXX object pymoose/CMakeFiles/_moose.dir/test_moosemodule.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.12/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.12 -I/usr/include/python3.12 -MD -MT pymoose/CMakeFiles/_moose.dir/test_moosemodule.cpp.o -MF CMakeFiles/_moose.dir/test_moosemodule.cpp.o.d -o CMakeFiles/_moose.dir/test_moosemodule.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/test_moosemodule.cpp [ 96%] Building CXX object pymoose/CMakeFiles/_moose.dir/PyRun.cpp.o cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../basecode -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/../msg -I/usr/lib64/python3.12/site-packages/numpy/core/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -I/usr/include/python3.12 -I/usr/include/python3.12 -MD -MT pymoose/CMakeFiles/_moose.dir/PyRun.cpp.o -MF CMakeFiles/_moose.dir/PyRun.cpp.o.d -o CMakeFiles/_moose.dir/PyRun.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/pymoose/PyRun.cpp /usr/bin/ld: /tmp/ccEyVZHj.ltrans17.ltrans.o: in function `testCreateStringDataset()': /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testNSDF.cpp:76:(.text+0x8c20): warning: the use of `tmpnam' is dangerous, better use `mkstemp' gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 96%] Built target libmoose /usr/bin/gmake -f CMakeFiles/moose.bin.dir/build.make CMakeFiles/moose.bin.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/moose.bin.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/moose.bin.dir/build.make CMakeFiles/moose.bin.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 96%] Building CXX object CMakeFiles/moose.bin.dir/basecode/main.cpp.o /usr/bin/g++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.5\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/msg -I/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -MD -MT CMakeFiles/moose.bin.dir/basecode/main.cpp.o -MF CMakeFiles/moose.bin.dir/basecode/main.cpp.o.d -o CMakeFiles/moose.bin.dir/basecode/main.cpp.o -c /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/basecode/main.cpp [ 97%] Linking CXX executable moose.bin /usr/bin/cmake -E cmake_link_script CMakeFiles/moose.bin.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id -rdynamic CMakeFiles/moose.bin.dir/basecode/main.cpp.o -o moose.bin -L/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build -lmoose -ldl gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 97%] Built target moose.bin [ 98%] Linking CXX shared module ../python/moose/_moose.so cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/cmake -E cmake_link_script CMakeFiles/_moose.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++11 -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--build-id -shared -o ../python/moose/_moose.so CMakeFiles/_moose.dir/moosemodule.cpp.o CMakeFiles/_moose.dir/vec.cpp.o CMakeFiles/_moose.dir/mfield.cpp.o CMakeFiles/_moose.dir/pymooseinit.cpp.o CMakeFiles/_moose.dir/melement.cpp.o CMakeFiles/_moose.dir/test_moosemodule.cpp.o CMakeFiles/_moose.dir/PyRun.cpp.o -L/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build -Wl,--whole-archive ../external/muparser/libmuparser.a ../builtins/libmoose_builtins.a ../msg/libmsg.a ../benchmarks/libbenchmarks.a ../shell/libshell.a ../randnum/librandnum.a ../scheduling/libscheduling.a ../mpi/libmoose_mpi.a ../biophysics/libbiophysics.a ../utility/libutility.a ../kinetics/libkinetics.a ../synapse/libsynapse.a ../intfire/libintfire.a ../hsolve/libhsolve.a ../mesh/libmesh.a ../signeur/libsigneur.a ../diffusion/libdiffusion.a ../ksolve/libksolve.a ../device/libdevice.a ../basecode/libbasecode.a -Wl,--no-whole-archive -lhdf5_cpp -lhdf5 -lhdf5_hl_cpp -lhdf5_hl -lgsl -lgslcblas /usr/bin/ld: /tmp/ccM3EgJz.ltrans58.ltrans.o: in function `testCreateStringDataset()': /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/builtins/testNSDF.cpp:76:(.text+0x47dc): warning: the use of `tmpnam' is dangerous, better use `mkstemp' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose && /usr/bin/cmake -E cmake_echo_color --cyan "MOOSE python extention is successfully built. Now " " Run 'sudo make install' to install it. " " " "NOTE: Run 'pip uninstall moose' to uninstall moose." MOOSE python extention is successfully built. Now Run 'sudo make install' to install it. NOTE: Run 'pip uninstall moose' to uninstall moose. gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 98%] Built target _moose /usr/bin/gmake -f CMakeFiles/copy_pymoose.dir/build.make CMakeFiles/copy_pymoose.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/copy_pymoose.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/copy_pymoose.dir/build.make CMakeFiles/copy_pymoose.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 99%] Copying required python files from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/python to to build directory /usr/bin/cmake -E copy_directory /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/python /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [ 99%] Built target copy_pymoose /usr/bin/gmake -f CMakeFiles/bdist.dir/build.make CMakeFiles/bdist.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles/bdist.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/bdist.dir/build.make CMakeFiles/bdist.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [100%] bdist is saved to /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist cd /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python && /usr/bin/python3 setup.cmake.py bdist_dumb -p CMAKE -d /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist /usr/lib/python3.12/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() /usr/lib/python3.12/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib/python3.12/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib/python3.12/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib/python3.12/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib/python3.12/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib/python3.12/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib/python3.12/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib/python3.12/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? Got 3.1.5 from VERSION file [INFO] Suffix for python SO: .so Unarchiving bdist file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist/pymoose-3.1.5.CMAKE.tar.gz to /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose_bdist_install /usr/bin/cmake -E chdir /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/pymoose_bdist_install tar xvf /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/bdist/pymoose-3.1.5.CMAKE.tar.gz ./ ./usr/ ./usr/lib/ ./usr/lib/python3.12/ ./usr/lib/python3.12/site-packages/ ./usr/lib/python3.12/site-packages/moose/ ./usr/lib/python3.12/site-packages/moose/SBML/ ./usr/lib/python3.12/site-packages/moose/SBML/__init__.py ./usr/lib/python3.12/site-packages/moose/SBML/__pycache__/ ./usr/lib/python3.12/site-packages/moose/SBML/__pycache__/__init__.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/SBML/__pycache__/readSBML.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/SBML/__pycache__/validation.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/SBML/__pycache__/writeSBML.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/SBML/readSBML.py ./usr/lib/python3.12/site-packages/moose/SBML/validation.py ./usr/lib/python3.12/site-packages/moose/SBML/writeSBML.py ./usr/lib/python3.12/site-packages/moose/__init__.py ./usr/lib/python3.12/site-packages/moose/__pycache__/ ./usr/lib/python3.12/site-packages/moose/__pycache__/__init__.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/alternate.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/constants.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/graph_utils.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/graphutil.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/hdfutil.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/merge.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/methods_utils.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/moose.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/moose_config.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/moose_constants.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/moose_test.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/optimizer_interface.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/plot_utils.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/print_utils.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/recording.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/__pycache__/utils.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/_moose.so ./usr/lib/python3.12/site-packages/moose/alternate.py ./usr/lib/python3.12/site-packages/moose/chemUtil/ ./usr/lib/python3.12/site-packages/moose/chemUtil/__init__.py ./usr/lib/python3.12/site-packages/moose/chemUtil/__pycache__/ ./usr/lib/python3.12/site-packages/moose/chemUtil/__pycache__/__init__.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/chemUtil/__pycache__/add_Delete_ChemicalSolver.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/chemUtil/__pycache__/chemConnectUtil.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/chemUtil/__pycache__/graphUtils.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/chemUtil/add_Delete_ChemicalSolver.py ./usr/lib/python3.12/site-packages/moose/chemUtil/chemConnectUtil.py ./usr/lib/python3.12/site-packages/moose/chemUtil/graphUtils.py ./usr/lib/python3.12/site-packages/moose/constants.py ./usr/lib/python3.12/site-packages/moose/genesis/ ./usr/lib/python3.12/site-packages/moose/genesis/__init__.py ./usr/lib/python3.12/site-packages/moose/genesis/__pycache__/ ./usr/lib/python3.12/site-packages/moose/genesis/__pycache__/__init__.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/genesis/__pycache__/writeKkit.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/genesis/writeKkit.py ./usr/lib/python3.12/site-packages/moose/graph_utils.py ./usr/lib/python3.12/site-packages/moose/graphutil.py ./usr/lib/python3.12/site-packages/moose/hdfutil.py ./usr/lib/python3.12/site-packages/moose/merge.py ./usr/lib/python3.12/site-packages/moose/methods_utils.py ./usr/lib/python3.12/site-packages/moose/moose.py ./usr/lib/python3.12/site-packages/moose/moose_config.py ./usr/lib/python3.12/site-packages/moose/moose_constants.py ./usr/lib/python3.12/site-packages/moose/moose_test.py ./usr/lib/python3.12/site-packages/moose/neuroml/ ./usr/lib/python3.12/site-packages/moose/neuroml/ChannelML.py ./usr/lib/python3.12/site-packages/moose/neuroml/MorphML.py ./usr/lib/python3.12/site-packages/moose/neuroml/NetworkML.py ./usr/lib/python3.12/site-packages/moose/neuroml/NeuroML.py ./usr/lib/python3.12/site-packages/moose/neuroml/__init__.py ./usr/lib/python3.12/site-packages/moose/neuroml/__pycache__/ ./usr/lib/python3.12/site-packages/moose/neuroml/__pycache__/ChannelML.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml/__pycache__/MorphML.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml/__pycache__/NetworkML.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml/__pycache__/NeuroML.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml/__pycache__/__init__.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml/__pycache__/utils.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml/utils.py ./usr/lib/python3.12/site-packages/moose/neuroml2/ ./usr/lib/python3.12/site-packages/moose/neuroml2/__init__.py ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/ ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/__init__.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/converter.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/generated_neuroml.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/generated_neuromlsub.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/hhfit.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/reader.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/test_converter.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/test_hhfit.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/test_reader.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml2/__pycache__/units.cpython-312.pyc ./usr/lib/python3.12/site-packages/moose/neuroml2/converter.py ./usr/lib/python3.12/site-packages/moose/neuroml2/generated_neuroml.py ./usr/lib/python3.12/site-packages/moose/neuroml2/generated_neuromlsub.py ./usr/lib/python3.12/site-packages/moose/neuroml2/hhfit.py ./usr/lib/python3.12/site-packages/moose/neuroml2/reader.py ./usr/lib/python3.12/site-packages/moose/neuroml2/test_converter.py ./usr/lib/python3.12/site-packages/moose/neuroml2/test_hhfit.py ./usr/lib/python3.12/site-packages/moose/neuroml2/test_reader.py ./usr/lib/python3.12/site-packages/moose/neuroml2/units.py ./usr/lib/python3.12/site-packages/moose/optimizer_interface.py ./usr/lib/python3.12/site-packages/moose/plot_utils.py ./usr/lib/python3.12/site-packages/moose/print_utils.py ./usr/lib/python3.12/site-packages/moose/recording.py ./usr/lib/python3.12/site-packages/moose/utils.py ./usr/lib/python3.12/site-packages/pymoose-3.1.5-py3.12.egg-info/ ./usr/lib/python3.12/site-packages/pymoose-3.1.5-py3.12.egg-info/PKG-INFO ./usr/lib/python3.12/site-packages/pymoose-3.1.5-py3.12.egg-info/SOURCES.txt ./usr/lib/python3.12/site-packages/pymoose-3.1.5-py3.12.egg-info/dependency_links.txt ./usr/lib/python3.12/site-packages/pymoose-3.1.5-py3.12.egg-info/requires.txt ./usr/lib/python3.12/site-packages/pymoose-3.1.5-py3.12.egg-info/top_level.txt ./usr/lib/python3.12/site-packages/rdesigneur/ ./usr/lib/python3.12/site-packages/rdesigneur/__init__.py ./usr/lib/python3.12/site-packages/rdesigneur/__pycache__/ ./usr/lib/python3.12/site-packages/rdesigneur/__pycache__/__init__.cpython-312.pyc ./usr/lib/python3.12/site-packages/rdesigneur/__pycache__/rdesigneur.cpython-312.pyc ./usr/lib/python3.12/site-packages/rdesigneur/__pycache__/rdesigneurProtos.cpython-312.pyc ./usr/lib/python3.12/site-packages/rdesigneur/__pycache__/rmoogli.cpython-312.pyc ./usr/lib/python3.12/site-packages/rdesigneur/rdesigneur.py ./usr/lib/python3.12/site-packages/rdesigneur/rdesigneurProtos.py ./usr/lib/python3.12/site-packages/rdesigneur/rmoogli.py gmake[2]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' [100%] Built target bdist gmake[1]: Leaving directory '/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/CMakeFiles 0 + pushd redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.cmake.py build '--executable=/usr/bin/python3 -sP' Got 3.1.5 from VERSION file [INFO] Suffix for python SO: .so + popd ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.ttbSMC + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + '[' /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT ++ dirname /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT + mkdir -p /builddir/build/BUILD/moose-3.1.5-build + mkdir /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd moose-core-3.1.5 + install -vD redhat-linux-build/moose.bin /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose install: creating directory '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr' install: creating directory '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin' 'redhat-linux-build/moose.bin' -> '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose' + install -vDt /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/ redhat-linux-build/libmoose.so install: creating directory '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64' 'redhat-linux-build/libmoose.so' -> '/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/libmoose.so' + pushd redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.cmake.py install -O1 --skip-build --root /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT --prefix /usr --install-lib=/usr/lib64/python3.12/site-packages /usr/lib/python3.12/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() /usr/lib64/python3.12/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' Got 3.1.5 from VERSION file [INFO] Suffix for python SO: .so + rm -rfv /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/__pycache__ + chmod +x /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.12/site-packages/moose/_moose.so + popd ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 3.1.5-21.fc41 --unique-debug-suffix -3.1.5-21.fc41.aarch64 --unique-debug-src-base moose-3.1.5-21.fc41.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 find-debuginfo: starting Extracting debug info from 3 files DWARF-compressing 3 files sepdebugcrcfix: Updated 3 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/moose-3.1.5-21.fc41.aarch64 7809 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.12 using python3.12 Bytecompiling .py files below /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.12 using python3.12 /usr/lib64/python3.12/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' /usr/lib64/python3.12/site-packages/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? /usr/lib64/python3.12/site-packages/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT Cannot initialize handler pyc: ModuleNotFoundError: No module named 'marshalparser' [src/multiprocess.rs:66:9] &cmd = Command { program: "/usr/bin/add-determinism", args: [ "/usr/bin/add-determinism", "--socket", "3", "--brp", "--handler", "ar,jar,javadoc", ], env: CommandEnv { clear: false, vars: { "SOURCE_DATE_EPOCH": Some( "1717804800", ), }, }, create_pidfd: false, } Bye! Bye! Bye! Bye! Reading /builddir/build/BUILD/moose-3.1.5-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.YI49m7 + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd moose-core-3.1.5 + checksec --file=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose RELRO STACK CANARY NX PIE RPATH RUNPATH Symbols FORTIFY Fortified Fortifiable FILE Full RELRO Canary found NX enabled PIE enabled No RPATH No RUNPATH No Symbols No 0 1 /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/bin/moose + pushd redhat-linux-build + ctest --output-on-failure -V -E test_streamer ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 UpdateCTestConfiguration from :/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/DartConfiguration.tcl Test project /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test_function 1: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_function.py" 1: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 1: Environment variables: 1: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 1: Test timeout computed to be: 1500 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/chemUtil/chemConnectUtil.py:12: SyntaxWarning: invalid escape sequence '\ ' 1: ''' Setup compartment and its members pool,reaction,enz cplx under self.meshEntry dictionaries \ 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:340: SyntaxWarning: invalid escape sequence '\[' 1: splitpath = re.sub("\[[0-9]+\]", "", splitpath) 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:387: SyntaxWarning: invalid escape sequence '\[' 1: tabPath = re.sub("\[[0-9]+\]", "", tabPath) 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:419: SyntaxWarning: invalid escape sequence '\[' 1: tabPath = re.sub("\[[0-9]+\]", "", tabPath) 1: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/genesis/writeKkit.py:624: SyntaxWarning: invalid escape sequence '\ ' 1: f.write("call /kinetics/"+ trimPath(item)+"/notes LOAD \ \n\""+moose.Annotator(info).getField('notes')+"\"\n") 1: 0 0.0 1: 1 1.1 1: 2 2.211 1: 3 3.322 1: 4 4.433 1: 5 5.5440000000000005 1/13 Test #1: test_function .................... Passed 0.50 sec test 2 Start 2: test_kkit 2: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_kkit.py" 2: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 2: Environment variables: 2: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 2: Test timeout computed to be: 1500 2: Script dir /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 2/13 Test #2: test_kkit ........................ Passed 0.25 sec test 3 Start 3: test_ksolve 3: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_ksolve.py" 3: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 3: Environment variables: 3: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 3: Test timeout computed to be: 1500 3: Using moose from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 3: [INFO] Using method = rk5 3: [INFO] Time taken 0.0010120868682861328 3: Test passed 3/13 Test #3: test_ksolve ...................... Passed 0.25 sec test 4 Start 4: test_moose_paths 4: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_moose_paths.py" 4: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 4: Environment variables: 4: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 4: Test timeout computed to be: 1500 4/13 Test #4: test_moose_paths ................. Passed 0.25 sec test 5 Start 5: test_neuroml 5: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_neuroml.py" 5: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 5: Environment variables: 5: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 5: Test timeout computed to be: 1500 5: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/utils.py:98: SyntaxWarning: "is" with 'int' literal. Did you mean "=="? 5: if len(token) is 0: 5: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/neuroml/MorphML.py:584: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? 5: elif mechanismname is 'synapse': # synapse being added to the compartment 5: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/neuroml/MorphML.py:594: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? 5: elif mechanismname is 'spikegen': # spikegen being added to the compartment 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/cells_channels/CA1soma.morph.xml 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/cells_channels/CA1soma.morph.xml 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/CA1soma.net.xml 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/neuroml/CA1soma.net.xml 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.networkml: INFO Creating population CA1group of cell type CA1soma 5: moose.nml.networkml: INFO Creating population CA1group of cell type CA1soma 5: moose.nml.networkml: INFO Creating input under /elec 5: moose.nml.networkml: INFO Creating input under /elec 5: For injected current 4e-13, no of spikes in 1.0 second: 10 5: For injected current 8e-13, no of spikes in 1.0 second: 20 5: For injected current 1.4e-12, no of spikes in 1.0 second: 29 5: For injected current 1.8e-12, no of spikes in 1.0 second: 34 5/13 Test #5: test_neuroml ..................... Passed 2.43 sec test 6 Start 6: test_nsdf 6: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_nsdf.py" 6: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 6: Environment variables: 6: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 6: Test timeout computed to be: 1500 6: using moose from: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 6: event input /model[0]/writer[0].eventInput 0 6: 6: /model[0]/writer[0]/eventInput[0] 6: 2024-06-08T08:16:21.174981 6: 2024-06-08T08:16:21.398597 6/13 Test #6: test_nsdf ........................ Passed 0.67 sec test 7 Start 7: test_pymoose 7: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_pymoose.py" 7: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 7: Environment variables: 7: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 7: Test timeout computed to be: 1500 7: ..............................0: Error: SetGet::strGet: Field Vm not found on Element z 7: 0: Error: SetGet::strGet: Field Vm not found on Element z 7: 0: Error: SetGet::strGet: Field Vm not found on Element z 7: .. 7: ---------------------------------------------------------------------- 7: Ran 32 tests in 0.005s 7: 7: OK 7: PyMOOSE Regression Tests: 7: Testing connect ... OK 7: Testing delete ... neutral208782415522651068931240664756795577442 neutral208782415522651068931240664756795577442/b 7: /neutral208782415522651068931240664756795577442[0] /neutral208782415522651068931240664756795577442[0]/b[0] 7: 3 3 7: neutral145834468138568737713911909102226651536 neutral145834468138568737713911909102226651536/b 7: /neutral145834468138568737713911909102226651536[0] /neutral145834468138568737713911909102226651536[0]/b[0] 7: 3 3 7: neutral232666428034295257838388073253971436815 neutral232666428034295257838388073253971436815/b 7: /neutral232666428034295257838388073253971436815[0] /neutral232666428034295257838388073253971436815[0]/b[0] 7: 3 3 7: neutral3767795345234249027546820376143274151 neutral3767795345234249027546820376143274151/b 7: /neutral3767795345234249027546820376143274151[0] /neutral3767795345234249027546820376143274151[0]/b[0] 7: 3 3 7: neutral119066804516358773015697154406649773141 neutral119066804516358773015697154406649773141/b 7: /neutral119066804516358773015697154406649773141[0] /neutral119066804516358773015697154406649773141[0]/b[0] 7: 3 3 7: neutral313986062310910751620592912397961361971 neutral313986062310910751620592912397961361971/b 7: /neutral313986062310910751620592912397961361971[0] /neutral313986062310910751620592912397961361971[0]/b[0] 7: 3 3 7: neutral330771287347334019916423380532635850306 neutral330771287347334019916423380532635850306/b 7: /neutral330771287347334019916423380532635850306[0] /neutral330771287347334019916423380532635850306[0]/b[0] 7: 3 3 7: neutral287784226508276352690118672951853334543 neutral287784226508276352690118672951853334543/b 7: /neutral287784226508276352690118672951853334543[0] /neutral287784226508276352690118672951853334543[0]/b[0] 7: 3 3 7: neutral72613289913729445021613468608317758840 neutral72613289913729445021613468608317758840/b 7: /neutral72613289913729445021613468608317758840[0] /neutral72613289913729445021613468608317758840[0]/b[0] 7: 3 3 7: neutral243931677200199283548499371188867350548 neutral243931677200199283548499371188867350548/b 7: /neutral243931677200199283548499371188867350548[0] /neutral243931677200199283548499371188867350548[0]/b[0] 7: 3 3 7: neutral197657034809925463291282426540176212173 neutral197657034809925463291282426540176212173/b 7: /neutral197657034809925463291282426540176212173[0] /neutral197657034809925463291282426540176212173[0]/b[0] 7: 3 3 7: neutral171453375876706147585835931732377265335 neutral171453375876706147585835931732377265335/b 7: /neutral171453375876706147585835931732377265335[0] /neutral171453375876706147585835931732377265335[0]/b[0] 7: 3 3 7: neutral55054553587996311736222337785927177232 neutral55054553587996311736222337785927177232/b 7: /neutral55054553587996311736222337785927177232[0] /neutral55054553587996311736222337785927177232[0]/b[0] 7: 3 3 7: neutral249670322067090053690972544263868066953 neutral249670322067090053690972544263868066953/b 7: /neutral249670322067090053690972544263868066953[0] /neutral249670322067090053690972544263868066953[0]/b[0] 7: 3 3 7: neutral84805613115736842624580277766523036905 neutral84805613115736842624580277766523036905/b 7: /neutral84805613115736842624580277766523036905[0] /neutral84805613115736842624580277766523036905[0]/b[0] 7: 3 3 7/13 Test #7: test_pymoose ..................... Passed 0.27 sec test 8 Start 8: test_pyrun 8: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_pyrun.py" 8: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 8: Environment variables: 8: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 8: Test timeout computed to be: 1500 8/13 Test #8: test_pyrun ....................... Passed 0.25 sec test 9 Start 9: test_sbml 9: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_sbml.py" 9: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 9: Environment variables: 9: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 9: Test timeout computed to be: 1500 9: line 3: (99507 [Warning]) In situations where a mathematical expression refers to extent, the units of extent should be consistent with the global extent units of the model. In models where the 'extentUnits' attribute has not been declared, libSBML does not yet have the functionality to verify accurately the consistency of the units in such expressions. 9: 9: line 29: (99508 [Warning]) In situations where a mathematical expression refers to a compartment, species or parameter, it is necessary to know the units of the object to establish unit consistency. In models where the units of an object have not been declared, libSBML does not yet have the functionality to accurately verify the consistency of the units in mathematical expressions referring to that object. 9: The units of the 'k1' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate. 9: 9: line 29: (20702 [Warning]) If the attribute 'units' on a given Parameter object has not been set, then the unit of measurement associated with that parameter's value is undefined. 9: Reference: L3V1 Section 4.7.3 9: The with id 'k1' does not have a 'units' attribute. 9: 9: line 39: (99505 [Warning]) In situations where a mathematical expression contains literal numbers or parameters whose units have not been declared, it is not possible to verify accurately the consistency of the units in the expression. 9: The units of the expression 'compartment * k1 * S1' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate. 9: 9: line 29: (80701 [Warning]) As a principle of best modeling practice, the units of a should be declared rather than be left undefined. Doing so improves the ability of software to check the consistency of units and helps make it easier to detect potential errors in models. 9: The with the id 'k1' does not have a 'units' attribute. 9: 9: 9: File: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/./chem_models/00001-sbml-l3v1.xml (Level 3, version 1) 9: model: > 9: functionDefinitions: 0 9: unitDefinitions: 3 9: compartmentTypes: 0 9: specieTypes: 0 9: compartments: 1 9: species: 2 9: parameters: 1 9: initialAssignments: 0 9: rules: 0 9: constraints: 0 9: reactions: 1 9: events: 0 9: 9: 9: Compartment size is 1 9: 9: 9: 9: 9: 9: 9: 9/13 Test #9: test_sbml ........................ Passed 0.26 sec test 10 Start 10: test_snippets 10: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_snippets.py" 10: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 10: Environment variables: 10: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 10: Test timeout computed to be: 1500 10: Testing snippets in /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/../../Demos/snippets 10: [INFO] Disabling all pylab/matplotlib show() functions 10/13 Test #10: test_snippets .................... Passed 0.03 sec test 11 Start 11: test_synchan 11: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_synchan.py" 11: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 11: Environment variables: 11: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 11: Test timeout computed to be: 1500 11: Using moose from /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 11: ('Synapses:', 1, 'w=', 1.0) 11/13 Test #11: test_synchan ..................... Passed 0.25 sec test 12 Start 12: test_table_streaming_support 12: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_table_streaming_support.py" 12: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 12: Environment variables: 12: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 12: Test timeout computed to be: 1500 12: @ Sat Jun 8 08:16:22 2024: 10% of total 1000 seconds is over. 12: @ Sat Jun 8 08:16:22 2024: 20% of total 1000 seconds is over. 12: @ Sat Jun 8 08:16:22 2024: 30% of total 1000 seconds is over. 12: @ Sat Jun 8 08:16:22 2024: 40% of total 1000 seconds is over. 12: @ Sat Jun 8 08:16:22 2024: 50% of total 1000 seconds is over. 12: @ Sat Jun 8 08:16:22 2024: 60% of total 1000 seconds is over. 12: @ Sat Jun 8 08:16:22 2024: 70% of total 1000 seconds is over. 12: @ Sat Jun 8 08:16:22 2024: 80% of total 1000 seconds is over. 12: @ Sat Jun 8 08:16:22 2024: 90% of total 1000 seconds is over. 12: @ Sat Jun 8 08:16:22 2024: 100% of total 1000 seconds is over. 12: [INFO] Using moose form /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python/moose/__init__.py 12: outfile : _tables/compt/a/tabA.npy useStreamer: True Path: /compt[0]/a[0]/tabA[0] 12: outfile : table2.npy useStreamer: True Path: /compt[0]/b[0]/tabB[0] 12: outfile : tablec.csv useStreamer: True Path: /compt[0]/c[0]/tabC[0] 12: Starting moose for 1000 12: MOOSE is done 12: [(3.27854e-318, 1. ) (1.00000e+000, 0.92331735) 12: (2.00000e+000, 0.84777147) ... (9.98000e+002, 0.31806056) 12: (9.99000e+002, 0.31806056) (1.00000e+003, 0.31806056)] 12: [(3.27854e-318, 2. ) (1.00000e+000, 2.07704612) 12: (2.00000e+000, 2.15294716) ... (9.98000e+002, 2.68506706) 12: (9.99000e+002, 2.68506706) (1.00000e+003, 2.68506706)] 12: [[0.00000000e+00 5.00000000e-01] 12: [1.00000000e+00 5.76988371e-01] 12: [2.00000000e+00 6.52832515e-01] 12: ... 12: [9.98000000e+02 1.18455350e+00] 12: [9.99000000e+02 1.18455350e+00] 12: [1.00000000e+03 1.18455350e+00]] 12: [3.27854e-318 1.00000e+000 2.00000e+000 ... 9.98000e+002 9.99000e+002 12: 1.00000e+003] 12: [3.27854e-318 1.00000e+000 2.00000e+000 ... 9.98000e+002 9.99000e+002 12: 1.00000e+003] 12: [INFO] All tests passed 12/13 Test #12: test_table_streaming_support ..... Passed 0.27 sec test 13 Start 13: test_vec 13: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python/test_vec.py" 13: Working Directory: /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/tests/python 13: Environment variables: 13: PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/redhat-linux-build/python 13: Test timeout computed to be: 1500 13/13 Test #13: test_vec ......................... Passed 0.24 sec The following tests passed: test_function test_kkit test_ksolve test_moose_paths test_neuroml test_nsdf test_pymoose test_pyrun test_sbml test_snippets test_synchan test_table_streaming_support test_vec 100% tests passed, 0 tests failed out of 13 Total Test time (real) = 5.92 sec + popd ~/build/BUILD/moose-3.1.5-build/moose-core-3.1.5 + PYTHONPATH=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/lib64/python3.12/site-packages + /usr/bin/python3 -c 'import moose; element = moose.Neutral("/yyy"); print(element.path)' /yyy[0] + RPM_EC=0 ++ jobs -p + exit 0 Processing files: moose-3.1.5-21.fc41.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.NSPidW + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + DOCDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/README.md /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.CYUJLb + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + LICENSEDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/LICENSE /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + RPM_EC=0 ++ jobs -p + exit 0 Provides: libmoose.so()(64bit) moose = 3.1.5-21.fc41 moose(aarch-64) = 3.1.5-21.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgsl.so.27()(64bit) libgslcblas.so.0()(64bit) libhdf5.so.200()(64bit) libhdf5_hl.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmoose.so()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: python3-moose-3.1.5-21.fc41.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.IdieuN + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + DOCDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/README.md /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/doc/moose + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.7kgAQU + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + cd moose-core-3.1.5 + LICENSEDIR=/builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + cp -pr /builddir/build/BUILD/moose-3.1.5-build/moose-core-3.1.5/LICENSE /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT/usr/share/licenses/moose + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-moose = 3.1.5-21.fc41 python3-moose = 3.1.5-21.fc41 python3-moose(aarch-64) = 3.1.5-21.fc41 python3.12-moose = 3.1.5-21.fc41 python3.12dist(pymoose) = 3.1.5 python3dist(pymoose) = 3.1.5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgsl.so.27()(64bit) libgslcblas.so.0()(64bit) libhdf5.so.200()(64bit) libhdf5_hl.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 python3.12dist(numpy) rtld(GNU_HASH) Processing files: moose-debugsource-3.1.5-21.fc41.aarch64 Provides: moose-debugsource = 3.1.5-21.fc41 moose-debugsource(aarch-64) = 3.1.5-21.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: moose-debuginfo-3.1.5-21.fc41.aarch64 Provides: debuginfo(build-id) = 35d99280207726e15140e16b17a90e1422bedebf debuginfo(build-id) = 6177bcca59201b6d8d02225871c4897a6f2cdfd2 libmoose.so-3.1.5-21.fc41.aarch64.debug()(64bit) moose-debuginfo = 3.1.5-21.fc41 moose-debuginfo(aarch-64) = 3.1.5-21.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: moose-debugsource(aarch-64) = 3.1.5-21.fc41 Processing files: python3-moose-debuginfo-3.1.5-21.fc41.aarch64 Provides: debuginfo(build-id) = 4041e96ea7e32952679fff27758d439b3a80f3e4 python-moose-debuginfo = 3.1.5-21.fc41 python3-moose-debuginfo = 3.1.5-21.fc41 python3-moose-debuginfo(aarch-64) = 3.1.5-21.fc41 python3.12-moose-debuginfo = 3.1.5-21.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: moose-debugsource(aarch-64) = 3.1.5-21.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/moose-3.1.5-build/BUILDROOT Wrote: /builddir/build/RPMS/moose-3.1.5-21.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/moose-debugsource-3.1.5-21.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/python3-moose-3.1.5-21.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/python3-moose-debuginfo-3.1.5-21.fc41.aarch64.rpm Wrote: /builddir/build/RPMS/moose-debuginfo-3.1.5-21.fc41.aarch64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.8A4aDE + umask 022 + cd /builddir/build/BUILD/moose-3.1.5-build + test -d /builddir/build/BUILD/moose-3.1.5-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/moose-3.1.5-build + rm -rf /builddir/build/BUILD/moose-3.1.5-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild moose-3.1.5-21.fc41.src.rpm Finish: build phase for moose-3.1.5-21.fc41.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-40-aarch64-1717834157.279534/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/moose-3.1.5-21.fc41.src.rpm) Config(child) 7 minutes 5 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "moose", "epoch": null, "version": "3.1.5", "release": "21.fc41", "arch": "src" }, { "name": "moose", "epoch": null, "version": "3.1.5", "release": "21.fc41", "arch": "aarch64" }, { "name": "moose-debugsource", "epoch": null, "version": "3.1.5", "release": "21.fc41", "arch": "aarch64" }, { "name": "python3-moose-debuginfo", "epoch": null, "version": "3.1.5", "release": "21.fc41", "arch": "aarch64" }, { "name": "python3-moose", "epoch": null, "version": "3.1.5", "release": "21.fc41", "arch": "aarch64" }, { "name": "moose-debuginfo", "epoch": null, "version": "3.1.5", "release": "21.fc41", "arch": "aarch64" } ] } RPMResults finished